Metagenome Family F088299

Basic Information
Family ID	F088299
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	105 residues
Representative Sequence	FIHEDELSLSDIQQNMSTDNSLYVVVRTASDYIPYEQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPRSEWGQYFTSRI
Number of Associated Samples	52
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton (38.532 % of family members)
Environment Ontology (ENVO)	Unclassified (38.532 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (55.046 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.00% β-sheet: 35.00% Coil/Unstructured: 43.00%
Feature Viewer

Powered by Feature Viewer

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	71.56%
Marine	Environmental → Aquatic → Marine	28.44%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	60.55%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	21.10%
Lentic	Environmental → Aquatic → Freshwater → Lentic	7.34%
Coastal	Environmental → Aquatic → Marine → Coastal	4.59%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	60.55%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	21.10%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.59%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	4.59%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.75%

Habitat	Taxonomy	Distribution
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	38.53%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	20.18%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	12.84%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.34%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.59%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.67%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	3.67%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	2.75%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	1.83%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	1.83%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.92%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.92%
Freshwater And Marine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Freshwater And Marine	0.92%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000867	Estuary microbial communities from the Columbia River - metatranscriptome 5 PSU	Environmental	Open in IMG/M
3300002279	Freshwater microbial communities from Lake Mendota, WI - 29APR2009 deep hole epilimnion ns	Environmental	Open in IMG/M
3300002390	Freshwater microbial communities from Lake Mendota, WI - 02APR2012 deep hole epilimnion	Environmental	Open in IMG/M
3300005525	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaG	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300007543	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-3	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007561	Estuarine microbial communities from the Columbia River estuary - metaG 1561A-3	Environmental	Open in IMG/M
3300007585	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-3	Environmental	Open in IMG/M
3300007632	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-3	Environmental	Open in IMG/M
3300007636	Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3	Environmental	Open in IMG/M
3300007649	Estuarine microbial communities from the Columbia River estuary - metaG 1560A-3	Environmental	Open in IMG/M
3300007661	Estuarine microbial communities from the Columbia River estuary - metaG 1546A-3	Environmental	Open in IMG/M
3300007718	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-3	Environmental	Open in IMG/M
3300007860	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372A_3um	Environmental	Open in IMG/M
3300007861	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372B_3um	Environmental	Open in IMG/M
3300007955	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_3.0um	Environmental	Open in IMG/M
3300008021	Estuarine microbial communities from the Columbia River estuary - metaG 1569A-3	Environmental	Open in IMG/M
3300008115	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-100-LTR	Environmental	Open in IMG/M
3300008122	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample HABS-E2014-0124-100-LTR	Environmental	Open in IMG/M
3300008263	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-53-LTR	Environmental	Open in IMG/M
3300008264	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-53-LTR	Environmental	Open in IMG/M
3300008265	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0126-100-LTR	Environmental	Open in IMG/M
3300009026	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300011011	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1m	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020162	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1	Environmental	Open in IMG/M
3300020205	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1	Environmental	Open in IMG/M
3300020493	Freshwater microbial communities from Lake Mendota, WI - 14NOV2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020561	Freshwater microbial communities from Lake Mendota, WI - 22APR2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021108	Freshwater microbial communities from Lake Mendota, WI - Practice 20APR2010 epilimnion	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300027203	Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3 (SPAdes)	Environmental	Open in IMG/M
3300027236	Estuarine microbial communities from the Columbia River estuary - metaG 1554A-3 (SPAdes)	Environmental	Open in IMG/M
3300027320	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300033984	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034068	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
EsTDRAFT_10210031	3300000867	Freshwater And Marine	NMSVDNSLYVVVRTAADYLPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDDVNKLFCTLPRSEWGQYFTSRVH*
B570J29589_10161941	3300002279	Freshwater	LYVVVRTAADYLPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDDVNKLFCTLPRSEWGQYFTSRV*
B570J29589_10219041	3300002279	Freshwater	DELSLSDIQRNMSVDNSLYVVVRTAADYLPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDDVNKLFCTLPRSEWGQYFTSRV*
B570J29645_1003702	3300002390	Freshwater	PSLILGFVRYDITLGIPTPQFIHEDELSLLDIQQNMCIDNSLYAVVHSASDYLPLEQLQHEFVSKFVLGDVMTCLYIVKIESIRGPLNVFKDYGAHGEDVNQLFCTLPRREWGQYFSSRII*
Ga0068877_104986082	3300005525	Freshwater Lake	ITLGIPTPQFIHEDELSLSDIQQNMSTDNSLYVVVRTASDYIPYEQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPRSEWGQYFTSRI*
Ga0079957_11125182	3300005805	Lake	GFIRYDITLGIPTPQFIHEDELSLSDIQQNMSTDNSLYVVVHTASDYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI*
Ga0079957_12211632	3300005805	Lake	GFIRYDITLGIPTPQFIHEDELSLSDIQQNMSIDNSLYVVVRTASDYIPYEQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPRSEWGQYFTSRI*
Ga0102853_10417871	3300007543	Estuarine	ILGFIRYDITLGIPTPQFIDEDELSLLDIQQNMCIDNSLYAVVHSASDYLPFEQLQHKFVSTFVLGDVMTCLYIVKIESIRGPLNVFKDYGAHGEDVNKLFCTLPRREWGQYFSSRIT*
Ga0102853_10556082	3300007543	Estuarine	ITLGIPTPQFIHEDELSLSDIQQNMSTDNSLYVVVRTASNYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIWCPLNVFHNYGADDDDVNKLFCTLPRSEWGQYFTSRI*
Ga0102828_10222122	3300007559	Estuarine	MYTDNSLYAVVHSASDYLPLEQLQQEFVSSFVLGDVMTCVYIVNVETIRCPLNVFKDYGAHDENVTKLFCTLPKREWGQYFSSRIV*
Ga0102914_11478712	3300007561	Estuarine	TDNSLYVVVRTASDYIPYEQLQHEFVSTFVLGDVMTCLYVVKIDLIRCPLNVFQNYGADGDDVNKLFCTLPRSEWGQYFTSRI*
Ga0102916_11063851	3300007585	Estuarine	MAGGIHEDELSLSDIQQNMSTDNSLYVVVHTASDYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI*
Ga0102894_10445882	3300007632	Estuarine	HKDELSLSDIQQNMSTDNSLYVVVRTASDYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPRSEWGQYFTSRI*
Ga0102856_10386561	3300007636	Estuarine	MSTDNSLYVVVRTASDYIPYEQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPRSEWGQYFTSRI*
Ga0102912_11545211	3300007649	Estuarine	MIDFVDNDGATQSCPALMLGFIRYDITLGIPTPQFIHEDELSLSDIQQNLSTDNSLYVVVHTASDYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI*
Ga0102912_12545592	3300007649	Estuarine	TDNSLYVVVHTASDYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIRCLLNVFQNYGADGDDVNKLFCTLPRSEWGQYFTSRI*
Ga0102866_12075921	3300007661	Estuarine	IQQNLSTDNSLYVVVHTASDYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI*
Ga0102852_10408092	3300007718	Estuarine	CPSLILGFVRYDITLGIPTPQFIHEDELSLLDIQQNMCIDNSLYAVVHSASDYLPLEQLQHEFVSKFVLGDVMTCLYIVKIESIRGPLNVFKDYGAHGEDVNQLFCTLPRREWGQYFSSRII*
Ga0102852_10789862	3300007718	Estuarine	MLGIPTPQFIHEDELNLSDIQQNMSVDKSLYVVVRTASDFIPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDDVNKLFCTLPRSEWGQYFTSRV*
Ga0102852_11285121	3300007718	Estuarine	MCIDNSLYAVVHSASDYLTFEQLQHEFVSTFVLGDVMTCLYIVKIESIRGPLNVFKDYGAHGEDVNQLFCTLPRREWGQYFSSRIT*
Ga0105735_11626992	3300007860	Estuary Water	TDNSLYVVVHTASDYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI*
Ga0105736_11356911	3300007861	Estuary Water	MIDFEGDDGNTKPCPSLILGFVRYDITLGIPTPQFIHEDELSLSDIQQNMCIDNSLYAVVHCASDYLPFEQLQHEFVSTFVLGDVMTCLYIVKIESIRGPLNVFKDYGAHGEDVNKLFCTLPRREWGQYFSSRIT*
Ga0105736_11637722	3300007861	Estuary Water	PYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDDVNKLFCTLPRSEWGQYFTSRV*
Ga0105740_10585861	3300007955	Estuary Water	TTKSCPALMLGFIRYDVTLGIPTPQFIHEEELSLSDIQRNMSVDNSLYVVVRTAADFIPYEQLQHEFISTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDDVNKLFCTLPRSEWGQYFTSRV*
Ga0102922_11147431	3300008021	Estuarine	QQNMSTDNSLYVVVHTTSDYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI*
Ga0114348_11035051	3300008115	Freshwater, Plankton	DVTLGIPTPQFIHEDEFSLSDIQRNMSVDNSLYVVVRTAADYLPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPLNVFRNYGADGDDVNKLFCTLPRSEWGQYFTSRV*
Ga0114348_11064601	3300008115	Freshwater, Plankton	DVTLGIPTPQFIHEDEFSLSDIQRNMSVDNSLYVVVRTAADYLPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDNVNKLFCTLPRREWGQYFSSRIT*
Ga0114348_11149382	3300008115	Freshwater, Plankton	LPFEQLRHKIVSTFVLGDVMTCLYIVKIESIRGPLNVFKDYGAHGGDVYKLFCTLPRRDWGQYFSSRIT*
Ga0114359_11371821	3300008122	Freshwater, Plankton	DGTTKSCPALMLGFLRYDVTLGIPTPQFIHEDELSLSDIQRNMSVDNSLYVVVRTAADYLPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPLNVFRNYGADGDDVNKLFCTLPRSEWGQYFTSRV*
Ga0114359_12129921	3300008122	Freshwater, Plankton	DGTTKSCPALMLGFLRYDVTLGIPTPQFIHEDELSLSDIQRNMSVDNSLYVVVRTAADYLPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDNVNKLFCTLPRREWGQYFSSRIT*
Ga0114359_12921831	3300008122	Freshwater, Plankton	LSRIDVGIYKIRHYVGNTNPQFIHKDELSLSDIQRNMSVDNSLYVVVRSAADFIPYEQLQHEFVSSFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDDVNKLFCTLPRSEWGQYFTSRV*
Ga0114349_10265455	3300008263	Freshwater, Plankton	MSVDNSSYVVVRTATDFIPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIWCPLNVFKNYGADGDDVNKLFCTLPRSEWGQYFTSRV*
Ga0114349_10715721	3300008263	Freshwater, Plankton	MSVDNSLYVVVRTAADFIPCEQLQHEFVFTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGAVGDDVNKLFCTLPRSEWGQYFTSRV*
Ga0114349_11031231	3300008263	Freshwater, Plankton	MSVDNSLYVVVRTAADFIPYEQLQHEFISTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDDVNKLFCTLPRSEWGQYFTSRV*
Ga0114349_11102511	3300008263	Freshwater, Plankton	VGDDGSTQSCPSLILDFIRYDITSGIPTPQFIHEQELSSLLEIQQNRYIDNSLYAIVHTASDYLPFEQLQHKFVSTFVLGDVMTCLYIVKIETIRGPLNVFKDYGATGQDSNQLFCTLPRSEWGQYFSSRII*
Ga0114349_11294042	3300008263	Freshwater, Plankton	YDYALVDFVDNDGTTKSCPALMLGFLRYDVTLGIPTPQFIHEDELSLSDIQRNMSVDNSLYVVVRTAADYLPYEQLQHEFVSTFVLGNVMTCLYIVKIDSIRCPLNVFRNYGADGDDVNKLFCTLPRSEWGQYFTSRV*
Ga0114349_12331071	3300008263	Freshwater, Plankton	PSLILGFIRYDITSGIPTPQFIHEQELRLLEIQQNRSIDNSLYDVVHTASDYLPFEQLQHEFVSSFVLGDIMTCLYIVKIETIQGPLNVFKDFGATGQDSNQLFCTLPRSEWGQYFSSRIQ*
Ga0114349_12382672	3300008263	Freshwater, Plankton	DELSLLDIQQNMCIDNSLYAVVHSASDYLPFEQLQHEFVSTFVLGDVMTCLYIVKIESIWCPLNVFKDYGAHGEDVNQLFCTLPRREWGQYFSSRIT*
Ga0114349_12434742	3300008263	Freshwater, Plankton	MSIDNSLHVVVRTASDYIPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIQCPLNVFQNYGADGDDVNKLFCTLPRSEWGQYFTSRI*
Ga0114349_12438721	3300008263	Freshwater, Plankton	YDYALVDFVDNDGTTKSCPALMLGFIRYNVTLGIPTPQFIHEDELSLSDIQQNMSVDNSLYVVVRTAADFIPYEQLQHEFVSTFVLGDVMTCLYIVTIDSIRCPLNVFKNYGADGDDVNKLFCTLLRSEWGQYFTSRV*
Ga0114349_12498941	3300008263	Freshwater, Plankton	LGFIRYDITSGIPTPQFIHEQELTLLEIQQNRSIDNSLYAVVHTASDYLPFEQLQHEFVSSFVLGDVMTCLYIVKIETIWGPLNVFKDYGATGQDSKQLFCTLPRSEWGQYFSSRIL*
Ga0114349_12531052	3300008263	Freshwater, Plankton	CPSLILGFVRYDITLGIPTPQFIHEDELSLLDIQQNMCIDNSLYAVVHSASDYLPFEQLQHEFVSTFVLGDVTTCLYIVKIESIRCPLNVVKDYGAHGEDVNQLFCTLPRREWGQNFSSRIT*
Ga0114349_12619441	3300008263	Freshwater, Plankton	VVRTAADYLPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDNVNKLFCTLPRREWGQYFSSRIT*
Ga0114349_12692671	3300008263	Freshwater, Plankton	ITLGIPTPQFIHEDELSLSDIQRNMSIDNSLYVVVHTASDYTPYEQLQHEFMSTFVLGDVMTCLYIVKIDSIRCLLNVFQNYGADGDDVNKLFCTLPRSERGQYFTSRI*
Ga0114349_12708452	3300008263	Freshwater, Plankton	DELSLSDIQRNMSVDNSLYVVVRTAADFIPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGAVGDDVNKLFCTLPRSEWGQYFTSRV*
Ga0114349_12740241	3300008263	Freshwater, Plankton	DELSLSDIQRNMSVDNSLYVVVRTAADFIPYEQLQHEFISTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGAAGDDVNKLFCTLPRSEWGQYFTSRV*
Ga0114353_13397862	3300008264	Freshwater, Plankton	HEQELKLLEIQQNRFIDNSLYAVVHMASDYLPFEQLQHEFVSSFVLGDVMTCLYIVKIETIWGPLNAFKDYGATGQDSNQLFCTLPRSEWGQYFSSRIL*
Ga0114361_10041545	3300008265	Freshwater, Plankton	DIQRNMSVDNSLYVVVRTAADYLPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPSNVFQNYGADGDDVHKLFCTLPRCEWGQYFTSRV*
Ga0114361_10120485	3300008265	Freshwater, Plankton	MLLEIQQNRSIDNSLYAVVHTASDYLPFEKLQHKFMSTFVLGDVMTCLYIVKIETIRGPLNVFKDYGATGQDSNQLFCTLPRSEWGQYFSSRII*
Ga0114361_10294642	3300008265	Freshwater, Plankton	MSIDNSLYVVVRTASDFIPYEQLHHEFVSTFVLGDVINCMYIVKIDSIRCPLNVFKNYGADGYEVNKLFCTLPRSEWGQYFTSRV*
Ga0114361_10298662	3300008265	Freshwater, Plankton	MPLFIRHYLPFEQLQHKFVSTFVLVDVMTCLYIVTIETIRGPLNVFKDYGATGQDSNQLFCTLPRSEWGQHFSSRII*
Ga0114361_10419441	3300008265	Freshwater, Plankton	HEQELTLLEIQQNRSIDNSLYAVVHTASDYLPFEQLQHKFVSSFVLGDVMTCLYIVKIETIRGPLNVFKNYGATGQDSNQLFCTLPRSEWGQYFSSRIL*
Ga0114361_10423502	3300008265	Freshwater, Plankton	MLGFIRYDVTLGIPTPQFIHKDELSRSDIQRNMSVDNSLYVVVRTTADFIPYEQLQHEFISTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGAVGDDVNKLFCTLPRSEWGQYFTSRV*
Ga0114361_10429382	3300008265	Freshwater, Plankton	AMIEFEGNDGNTKSCPSLILGFVRYDITLGIPTPQFIHEDELSLMEIQQNMCIDNSLYAVVHSASDYLPFENLQNEFVSSFVLGDVMTCLYIVKIESILCPLNVFKDYGAHGVDVNQLFCTLPRREWGQYFSSRIT*
Ga0114361_10773042	3300008265	Freshwater, Plankton	VGDDGSTQSCPSLILGFIRYDITSGIPTPQFIHEQELTLLEIQQNKSIDNSLYAIVHTASDYLPFEQLKHKFMSTFVLGDVITCLYIVNIETIWGPLNVFKDYGATGQDSNQLFCTLPRSQWGQYFSSRII*
Ga0114361_10996892	3300008265	Freshwater, Plankton	DELSLSDIQRNMSVDNSLYVVVRTAADFIPYEQLQHEFISTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGAVGDDVNKLFCTLPRSEWGQYFTSRV*
Ga0114361_11242052	3300008265	Freshwater, Plankton	VVVRTAADFIPYEQLQHEFVSTLVLGDIMTRLYIMKIDSIRCPLNVFKNYGADGDDVNKLFCTLPRSEWGQY
Ga0114361_11358612	3300008265	Freshwater, Plankton	LLRGEHGLILGFIRYDITSGIPTPQFIHEQELTLLEIQQNRYIDNSLYAVVHTASDYLPFEQLQHEFVSSFVLGDVMTCLYIVKIETIWGPLNVFKDYGATGQDSKQLFCTLPRSEWGQYFSSRIL*
Ga0114361_11569592	3300008265	Freshwater, Plankton	DVTLGIPTPQFIHEDELSLSDIQRNMSVDNSLYVVVHTAADFIPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDNVNKLFCTLPRSEWGQYFTSRV*
Ga0114361_11782902	3300008265	Freshwater, Plankton	LGIPTPQFIHEDELSLSDIQRNMSVDNSLYVVVRTAADFIPCEQLQHEFVFTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGAVGDDVNKLFCTLPRSEWVQYFTSRV*
Ga0114361_11806841	3300008265	Freshwater, Plankton	DNSLYVVVRTAADFIPYEQLQHEFVSTFVLGDVMTCLYIVTIDSIRCPLNVFKNYGADGDDVNKLFCTLLRSEWGQYFTSRV*
Ga0114361_12043791	3300008265	Freshwater, Plankton	HEDELSLLDIQQNMCIDNSLYAVVHSASDYLPFEQLQHKFVSTFVLGDVMTCLYIVKIESIWCPLNVFKDYGAHGEDVNQLFCTLPRREWGQYFSSRIT*
Ga0114361_12050661	3300008265	Freshwater, Plankton	KSCPAMIVGFIRYDITLGIPTPQFIHEDELSLSDIQRIMSIDNSLYVVVRTASDFIPYEQLQHEFMSPFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDDVNKLFCTLPRSEWGQYFTSRI*
Ga0114361_12080771	3300008265	Freshwater, Plankton	ALIDFVGDDGSTQSCPSLILGFIRYDITSGIPTPQFIHEQELRLLEIQQNRSIDNSLYDVVHTASDYLPFEQLQHEFVSSFVLGDIMTCLYIVKIETIQGPLNVFKDFGATGQDSNQLFCTLPRSEWGQYFSSRIL*
Ga0114361_12208402	3300008265	Freshwater, Plankton	KSCPAMIVGFIRYDITLGIPTPQFIHEDELSLSDIQRNMSIYNSLYVVVRTASDFIPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPLNVLKNYGADGDNVNKLFCTLPRSEWGQYFTSRV*
Ga0114361_12651742	3300008265	Freshwater, Plankton	MSVDNSLYVGVRTAADFIPYEQLQHEIVSTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDDVNKLFCTLPRSE
Ga0114361_12808611	3300008265	Freshwater, Plankton	ITLGIPTPQFIHEDELSLSDIQRNMSIDNSLHVVVRTASDYIPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIQCPLNVFQNYGADGDDVNKLFCTLPRSEWGQYFTSRI*
Ga0102829_11337431	3300009026	Estuarine	MVDFVDNDGATQSCPALMLGFIRYDITLGIPTPQFIHKDELSLSDIQQNMSTDNSLYVVVHTASDYIPYEQLQHEFVSTFVLGDVMTCLYVVKIDSIWCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI*
Ga0102829_11512671	3300009026	Estuarine	MIEFEGNDGNTKSCPSLILGFVRYDITLGIPTPQFIHEDKQSLVDIQQNMCIDNSLYAVVHSASDYLPLEQLQHEFVSKFVLGDVMTCLYIVKIESIRGPLNVFKDYGAHGEDVNQLFCTLPRREWGQYFSSRIT*
Ga0102814_101075992	3300009079	Estuarine	TLGIPTPQFIHEDELTLSDMQQNMSTDNSLYVVVHTASDYIPYDQLQHEFVSTFVIGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI*
Ga0102815_107122652	3300009080	Estuarine	VHTASDYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI*
Ga0102812_106796161	3300009086	Estuarine	RYDITLGIPTPQFIHEDELSLSDIQRNMFIDNSLYVVVRTASDYIPYEQLQHEFVSTFVLGDVMTCLYVVKIDLIRCPLNVFQNYGVDGDDVNKLFCTLPRSEWGQYFTSRI*
Ga0129318_102683381	3300011009	Freshwater To Marine Saline Gradient	IQQNMCIDNSLYAVVHSASDYLPFEQLQHKFVSTFVLGDVMTCLYIVKIESILCPLNVFKDYGAHGVDVNQLFCTLPRREWGQYFSSRIT*
Ga0139556_10310051	3300011011	Freshwater	VVVRTASDYIPYEQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI*
Ga0153801_10277541	3300012017	Freshwater	DYAMVDFVDNDGATQSCPARMLGFIRYDITLGIPTPQFIHEDELSLSDIQQNMSTDNSLYVVVHTASDYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI*
Ga0177922_106388751	3300013372	Freshwater	SCPARMLGFIRYDITLGIPTPQFIHEDELSLSDIQQNMSTDNSLYVVVHTASDYIPYEHEQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGANGDNVNKLFCTLPRSEWGQYFTSRI*
Ga0177922_111073071	3300013372	Freshwater	YAMVDFVDNDGATQSCPALMLGFIRYDITLGIPTPQFIHEDELSLSDIQQNMSIDNSLYVVVRTASDYIPYEQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPRSEWGQYFTSRI*
Ga0211733_106493022	3300020160	Freshwater	CPALMLGFIRYDITLGIPTPQFIHEDELSLSDIQQNMSTDNSLYVVVHTASDYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSR
Ga0211735_105234911	3300020162	Freshwater	IRYNITLGIPTPQFIHEDELSLSDIQRNMSTDNSLYVVVRIASDYIPYEQLQHEFVSTFVLGDVMTCLYVVTIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI
Ga0211731_101451662	3300020205	Freshwater	FIHEDELSLSDIQQNMSTDNSLYVVVHTASDYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI
Ga0211731_102069542	3300020205	Freshwater	VCIASDYIPYEQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPRSEWGQYFTSRI
Ga0208591_10371911	3300020493	Freshwater	NMSVDNSLYVVVRTAADYLPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDDVNKLFCTLPRSEWGQYFTSRV
Ga0207934_10787032	3300020561	Freshwater	TAADYLPYEQLQHEFVSTFVLGDVMTCLYIVKIDSIRCPLNVFKNYGADGDDVNKLFCTLPRSEWGQYFTSRV
Ga0214162_10564361	3300021108	Freshwater	SCPALMLGFLRYDVTLGIPTPQFIHEDELSLSDIQRNMSVDNSLYVVVRTAADYLPYEQLQHEFVSTFVLGNVMTCLYIVKIDSIRCPLNVFRNYGADGDDVNKLFCTLPRSEWGQYFTSRV
Ga0244775_102943642	3300024346	Estuarine	YAMIDFVSGNGNETTCPCMILGFIRYDQTLGIPTPKFINEDGMTLDRIQQYMYTDNSLYAVVHSASDYLPLEQLQQEFVSSFVLGDVMTCVYIVNVETIRCPLNVFKDYGAHDENVTKLFCTLPKREWGQYFSSRIV
Ga0244775_110048281	3300024346	Estuarine	HEDELSLLDIQQNMCIDNALYAVVHSASDYLPFEQLQHEFVSTFVLGDVMTCLYIVKIESIRCPLNVFKDYGAHGEDVNQLFCTLPRREWGQYFSSRIT
Ga0244775_111308552	3300024346	Estuarine	TDNSLYVVVRTASDYIPYEQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPRSEWGQYFTSRI
Ga0208925_1118511	3300027203	Estuarine	DYIPYEQLQHVFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI
Ga0208026_10556271	3300027236	Estuarine	RYDYAMIDFVDNDGATQSCPAMMLGFIRYDITLGIPTPQFIHEDELSLSDIQQNMSTDNSLYVVVHTASDYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPRSEWGQYFTSRI
Ga0208923_10841271	3300027320	Estuarine	ASDYLPLEQLQQEFVSSFVLGDVMTCVYIVNVETIRCPLNVFKDYGAHGENVTKLFCTLPKREWGQYFSSRIV
Ga0209990_101546152	3300027816	Freshwater Lake	LSDIQQNMSTDNSLYVVVHTASDYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI
Ga0315907_106517331	3300031758	Freshwater	TAADYLPYEQLQHEFVSTFVLGDVMTCLYIVKIDLIRCPLNVFKNYGADGDDVNKLFCTLLRSEWGQYFTSRV
Ga0315899_113713232	3300031784	Freshwater	GIPTPQFIHEDELSLSDIQQNMSSDNSLYVVVRTASDYIPYEQLQHEFVSTFVLGDVMTCLYVVKIDSIRCSLNVLQNYGADGDDVNKLFCTLPRSEWGQYFTSRI
Ga0315905_110884682	3300032092	Freshwater	FIHEDELSLSDIQQNMSTDNSLYVVVRTASDYIPYEQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPRSEWGQYFTSRI
Ga0315902_105836061	3300032093	Freshwater	EDELSLSDIQQNMSTDNSLYVVVHTASDYIPYDQLQHEFVSTFVLGDVMTCLYVVKIDSIRCPLNVFQNYGADGDDVNKLFCTLPKSEWGQYFTSRI
Ga0334989_0032137_278_673	3300033984	Freshwater	MGHDGSTQSCPSLILGFIRYDITSGIPTPQFIHEQKLSLLEIQQNRNIDNSLYAVVHTASDYLPFEQLQHEFVSTFVLRDVMTCLYIVKIETIRGPLNVFKDYGATGQNVNKLFCTLPRREWGQYFSSRII
Ga0334989_0104597_796_1056	3300033984	Freshwater	MCTDNSLYAVVHSTSDYLPFEPLQHEFVSTFVLGDVMTCLHIVKIESIRGPLNVFKDYGAHGEDVNKLFCTLPRRERGQYFSSKIT
Ga0334989_0431556_197_556	3300033984	Freshwater	LILGFVRYDITLGIPTPQFIHEDELSLLDIQQNMCIDNSVYAVVHSASDYLPFEQLQHEFVSTFVLGDVMTCLYIVKIESIWCPLNVFKDYGAHGEDVNQLFCTLPRREWGQYFSSRII
Ga0335005_0274910_707_967	3300034022	Freshwater	MCIDNTLYAVVHSASDYLPFEQLQHEFVSTFVLGDVMTCLYIVKIESIRGPLNVFKDYGAHGEDVNQLFCTLPRREWGQYFSSRIT
Ga0335001_0129138_1024_1317	3300034064	Freshwater	MTLRQAFPHHNSYIDNSLYAVVHTASDYLPFEQLQHEFVSTFVLRDVMTCLYIVKIETIRGPLNVFKDYGATGQNVNKLFCTLPRREWGQYFSSRII
Ga0335001_0642405_221_553	3300034064	Freshwater	ITLGIPTPQFIHDDELLLLDIQQNMCTDNSLYAVVHSTSDYLPFEPLQHEFVSTFVLGDVMTCLHIVKIESIRGPLNVFKDYGAHGEDVNKLFCTLPRRERGQYFSSKIT
Ga0334990_0751737_3_341	3300034068	Freshwater	YDITLGIPTPQFIHEDELSLLDIKQNMCIDNSLYAVVHCASDYLPFEQLQHEFVSTFVLGDVMTCLYIVKIESIRGPLNVFKDYGAHGEDVNKLFCTLPRREWGQYFSSRIT
Ga0335058_0467096_333_716	3300034121	Freshwater	GNPQSCPSLILGFVRYDITLGIPTPQFIHEDELSLLDIQQNMCIDNSLYAVVHSASDYLPLEQLQHEFVSKFVLGDVMTCLYIVKIESIRGPLNVFKDYGAHGEDVNQLFCTLPRREWGQYFSSRII
Ga0335058_0707120_2_259	3300034121	Freshwater	CIDNSLCAVVHCASDYLPFEQLQHEFVSTFVLGDVMTCLYIVKIESIRGPLNVFKDYGAHGEDVNKLFCTLPRREWGQYFSSRIT
Ga0335017_0034574_19_453	3300034167	Freshwater	MNGSRRYDYAMIDFVGDDGSTQCCPSLILGFIRYDITLGIPTPHFIHDQELSLLEIQQNRNIDNSLYAVVHTASDYLPFEQLQHEFVSSFVLGDVMTCLYIVKIETIRGPLNVFKDYGAGQDVNKLFCTLPRREWGQYFSSRII
Ga0335017_0045311_278_673	3300034167	Freshwater	MGHDGSTQSCPSLILGFIRYDITSGIPTPQYIHEQKLSLLEIQQNRNIDNSLYAVVHTASDYLPFEQLQHEFVSTFVLRDVMTCLYIVKIETIRGPLNVFKDYGATGQNVNKLFCTLPRREWGQYFSSRII
Ga0335017_0053711_1925_2362	3300034167	Freshwater	MNGSRRYDYAMIDFVGDDGSTQCCPSLILGFIRYDIMLGIPAPHFIHDQELSLLEIQQNRNINNSLYAVVHTASDYLPFEQLQHEFVSSFVLGDVMTCLYIVKIETIRGPLNVFKDYGATGQDVNKLFCTLPRREWGQYFSSRII
Ga0335017_0507992_1_399	3300034167	Freshwater	FEDANGNTKSCPSLILGFVRYDITLGIPTPQFIHEDELSLSDIQQNMCIDNSLYAVVHCASDYLPLEQLQLEFVSKFVLGDVMTCLYIVKIESIRGPLNVFKDYGAHDEDVNQLFCTLPRKKWGQYFSSRII
Ga0335017_0660221_58_318	3300034167	Freshwater	MCIDNSVYAVVHSASDYLPFEQLQHEFVSTFVLGDVMTCLYIVKIESIWCPLNVFKDYGAHGEDVNQLFCTLPRREWGQYFSSRII

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088299

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign