Metagenome Family F088293

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088293
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	59 residues
Representative Sequence	VSVEQRILDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDAMRADLLLWNEKEAKP
Number of Associated Samples	84
Number of Associated Scaffolds	108

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.63 %
% of genes near scaffold ends (potentially truncated)	22.94 %
% of genes from short scaffolds (< 2000 bps)	66.06 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (44.037 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (33.027 % of family members)
Environment Ontology (ENVO)	Unclassified (58.716 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (44.954 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.68% β-sheet: 0.00% Coil/Unstructured: 44.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 108 Family Scaffolds
PF03796	DnaB_C	2.78
PF02511	Thy1	2.78
PF04851	ResIII	2.78
PF13604	AAA_30	2.78
PF07120	DUF1376	2.78
PF00436	SSB	1.85
PF04545	Sigma70_r4	1.85
PF10108	DNA_pol_B_exo2	1.85
PF12850	Metallophos_2	0.93
PF01555	N6_N4_Mtase	0.93
PF05970	PIF1	0.93
PF00216	Bac_DNA_binding	0.93
PF00574	CLP_protease	0.93
PF05037	DUF669	0.93
PF01464	SLT	0.93
PF01503	PRA-PH	0.93

COG ID	Name	Functional Category	% Frequency in 108 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	2.78
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	2.78
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	2.78
COG3756	Uncharacterized conserved protein YdaU, DUF1376 family	Function unknown [S]	2.78
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.85
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	1.85
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.85
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	1.85
COG0507	ATPase/5Ã¢â‚¬â„¢-3Ã¢â‚¬â„¢ helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.93
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.93
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.93
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.93
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.93
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.93

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.96 %
Unclassified	root	N/A	44.04 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	44.04 %
Unclassified	root	N/A	44.04 %
cellular organisms	root	All Organisms → cellular organisms	11.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.04 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	23.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.04 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	23.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.18 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.04 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	23.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.18 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	7.34 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.83 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.04 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	23.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.18 %
unclassified Armatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes	7.34 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.83 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.04 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	22.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.18 %
Armatimonadetes bacterium Cent15-Ar3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar3	7.34 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	1.83 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.04 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	22.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.18 %
Armatimonadetes bacterium Cent15-Ar3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar3	7.34 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	1.83 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.04 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	22.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.18 %
Armatimonadetes bacterium Cent15-Ar3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar3	7.34 %
Citrifermentans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Citrifermentans	1.83 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.04 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	22.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	20.18 %
Armatimonadetes bacterium Cent15-Ar3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar3	7.34 %
Citrifermentans pelophilum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Citrifermentans → Citrifermentans pelophilum	1.83 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000756\|JGI12421J11937_10032937	All Organisms → Viruses → Predicted Viral	1838	Open in IMG/M
3300000882\|FwDRAFT_10181723	All Organisms → Viruses → Predicted Viral	2247	Open in IMG/M
3300002274\|B570J29581_103782	Not Available	955	Open in IMG/M
3300002384\|B570J29636_1004308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	935	Open in IMG/M
3300002835\|B570J40625_100045753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar3	6371	Open in IMG/M
3300002835\|B570J40625_100052573	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5759	Open in IMG/M
3300002835\|B570J40625_100160183	All Organisms → Viruses → Predicted Viral	2541	Open in IMG/M
3300002835\|B570J40625_100214950	All Organisms → Viruses → Predicted Viral	2059	Open in IMG/M
3300002835\|B570J40625_100391022	All Organisms → Viruses → Predicted Viral	1356	Open in IMG/M
3300002835\|B570J40625_101106810	Not Available	669	Open in IMG/M
3300002835\|B570J40625_101518568	Not Available	549	Open in IMG/M
3300005805\|Ga0079957_1314563	Not Available	699	Open in IMG/M
3300007550\|Ga0102880_1182583	Not Available	548	Open in IMG/M
3300007559\|Ga0102828_1038084	All Organisms → Viruses → Predicted Viral	1095	Open in IMG/M
3300008266\|Ga0114363_1108554	Not Available	985	Open in IMG/M
3300009081\|Ga0105098_10062535	Not Available	1540	Open in IMG/M
3300009146\|Ga0105091_10038940	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2092	Open in IMG/M
3300009152\|Ga0114980_10173133	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1275	Open in IMG/M
3300009158\|Ga0114977_10237865	Not Available	1055	Open in IMG/M
3300009165\|Ga0105102_10256074	Not Available	893	Open in IMG/M
3300009165\|Ga0105102_10925373	Not Available	504	Open in IMG/M
3300009169\|Ga0105097_10369094	Not Available	796	Open in IMG/M
3300009169\|Ga0105097_10382078	Not Available	782	Open in IMG/M
3300009170\|Ga0105096_10635422	Not Available	563	Open in IMG/M
3300009183\|Ga0114974_10019869	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4754	Open in IMG/M
3300010160\|Ga0114967_10007943	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8187	Open in IMG/M
3300010370\|Ga0129336_10120025	Not Available	1533	Open in IMG/M
3300010885\|Ga0133913_12909777	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Citrifermentans → Citrifermentans pelophilum	1147	Open in IMG/M
3300011338\|Ga0153699_1571	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14384	Open in IMG/M
3300013004\|Ga0164293_10002545	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	15477	Open in IMG/M
3300013004\|Ga0164293_10155158	All Organisms → Viruses → Predicted Viral	1697	Open in IMG/M
3300013005\|Ga0164292_10241494	Not Available	1263	Open in IMG/M
3300013005\|Ga0164292_10813950	Not Available	590	Open in IMG/M
3300017754\|Ga0181344_1029002	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1695	Open in IMG/M
3300017774\|Ga0181358_1155540	Not Available	777	Open in IMG/M
3300017784\|Ga0181348_1119491	Not Available	1013	Open in IMG/M
3300018041\|Ga0181601_10323711	Not Available	846	Open in IMG/M
3300018048\|Ga0181606_10275569	Not Available	940	Open in IMG/M
3300020157\|Ga0194049_1024668	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1550	Open in IMG/M
3300020498\|Ga0208050_1002720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar3	2336	Open in IMG/M
3300020511\|Ga0208593_1002553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar3	2479	Open in IMG/M
3300020547\|Ga0208361_1003900	All Organisms → Viruses → Predicted Viral	2554	Open in IMG/M
3300020566\|Ga0208222_1002198	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5279	Open in IMG/M
3300021519\|Ga0194048_10004813	Not Available	6500	Open in IMG/M
3300021600\|Ga0194059_1133060	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	763	Open in IMG/M
3300021952\|Ga0213921_1016445	All Organisms → Viruses → Predicted Viral	1290	Open in IMG/M
3300021956\|Ga0213922_1009410	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2755	Open in IMG/M
3300021956\|Ga0213922_1015981	Not Available	1976	Open in IMG/M
3300021961\|Ga0222714_10296507	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	888	Open in IMG/M
3300021962\|Ga0222713_10735327	Not Available	558	Open in IMG/M
3300021963\|Ga0222712_10186050	All Organisms → Viruses → Predicted Viral	1371	Open in IMG/M
3300022179\|Ga0181353_1060569	Not Available	979	Open in IMG/M
3300022179\|Ga0181353_1092404	Not Available	752	Open in IMG/M
3300024346\|Ga0244775_10417657	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1102	Open in IMG/M
3300024512\|Ga0255186_1025049	Not Available	806	Open in IMG/M
3300027675\|Ga0209077_1044755	Not Available	1208	Open in IMG/M
3300027675\|Ga0209077_1044755	Not Available	1208	Open in IMG/M
3300027693\|Ga0209704_1053951	All Organisms → Viruses → Predicted Viral	1103	Open in IMG/M
3300027721\|Ga0209492_1196363	Not Available	694	Open in IMG/M
3300027733\|Ga0209297_1066695	All Organisms → Viruses → Predicted Viral	1595	Open in IMG/M
3300027736\|Ga0209190_1015080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar3	4460	Open in IMG/M
3300027746\|Ga0209597_1003046	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10461	Open in IMG/M
3300027754\|Ga0209596_1052506	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Citrifermentans → Citrifermentans pelophilum	2122	Open in IMG/M
3300027754\|Ga0209596_1102672	All Organisms → Viruses → Predicted Viral	1346	Open in IMG/M
3300027759\|Ga0209296_1002200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar3	14231	Open in IMG/M
3300027759\|Ga0209296_1014247	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4672	Open in IMG/M
3300027764\|Ga0209134_10119715	Not Available	905	Open in IMG/M
3300027770\|Ga0209086_10149323	Not Available	1132	Open in IMG/M
3300027900\|Ga0209253_10110833	Not Available	2243	Open in IMG/M
3300027973\|Ga0209298_10107763	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1209	Open in IMG/M
3300027975\|Ga0209391_10182153	Not Available	881	Open in IMG/M
3300028025\|Ga0247723_1138228	Not Available	580	Open in IMG/M
3300028394\|Ga0304730_1031347	All Organisms → Viruses → Predicted Viral	2747	Open in IMG/M
3300031963\|Ga0315901_10849483	Not Available	656	Open in IMG/M
3300032093\|Ga0315902_10376084	All Organisms → Viruses → Predicted Viral	1298	Open in IMG/M
3300032173\|Ga0315268_10185770	All Organisms → Viruses → Predicted Viral	1984	Open in IMG/M
3300032173\|Ga0315268_10712961	All Organisms → Viruses → Predicted Viral	1000	Open in IMG/M
3300033816\|Ga0334980_0005257	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5809	Open in IMG/M
3300033981\|Ga0334982_0054363	All Organisms → Viruses → Predicted Viral	2203	Open in IMG/M
3300033981\|Ga0334982_0245285	Not Available	864	Open in IMG/M
3300033992\|Ga0334992_0021067	Not Available	4041	Open in IMG/M
3300033992\|Ga0334992_0180743	All Organisms → Viruses → Predicted Viral	1062	Open in IMG/M
3300033995\|Ga0335003_0177074	Not Available	1040	Open in IMG/M
3300033996\|Ga0334979_0000584	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	27437	Open in IMG/M
3300034012\|Ga0334986_0080297	All Organisms → Viruses → Predicted Viral	1993	Open in IMG/M
3300034019\|Ga0334998_0439249	Not Available	740	Open in IMG/M
3300034020\|Ga0335002_0132421	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1642	Open in IMG/M
3300034020\|Ga0335002_0662687	Not Available	530	Open in IMG/M
3300034050\|Ga0335023_0030192	Not Available	3182	Open in IMG/M
3300034061\|Ga0334987_0045086	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3709	Open in IMG/M
3300034061\|Ga0334987_0531551	Not Available	709	Open in IMG/M
3300034062\|Ga0334995_0000465	All Organisms → cellular organisms → Bacteria	43599	Open in IMG/M
3300034082\|Ga0335020_0015126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar3	4509	Open in IMG/M
3300034082\|Ga0335020_0017336	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4153	Open in IMG/M
3300034082\|Ga0335020_0110785	All Organisms → Viruses → Predicted Viral	1395	Open in IMG/M
3300034095\|Ga0335022_0345737	Not Available	824	Open in IMG/M
3300034101\|Ga0335027_0543784	Not Available	719	Open in IMG/M
3300034102\|Ga0335029_0003593	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	12336	Open in IMG/M
3300034104\|Ga0335031_0002861	All Organisms → cellular organisms → Bacteria	12955	Open in IMG/M
3300034104\|Ga0335031_0087477	All Organisms → Viruses → Predicted Viral	2208	Open in IMG/M
3300034105\|Ga0335035_0089040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar3	1999	Open in IMG/M
3300034106\|Ga0335036_0416004	Not Available	859	Open in IMG/M
3300034108\|Ga0335050_0070823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium Cent15-Ar3	2104	Open in IMG/M
3300034118\|Ga0335053_0185562	Not Available	1377	Open in IMG/M
3300034167\|Ga0335017_0317572	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	864	Open in IMG/M
3300034280\|Ga0334997_0782321	Not Available	575	Open in IMG/M
3300034283\|Ga0335007_0043190	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3498	Open in IMG/M
3300034283\|Ga0335007_0180172	Not Available	1485	Open in IMG/M
3300034283\|Ga0335007_0278297	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1110	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.08%
Terrestrial	Environmental → Terrestrial	0.92%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	90.83%
Marine	Environmental → Aquatic → Marine	8.26%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.92%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	53.21%
Lentic	Environmental → Aquatic → Freshwater → Lentic	19.27%
Sediment	Environmental → Aquatic → Freshwater → Sediment	11.01%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.67%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.67%
Creek	Environmental → Aquatic → Freshwater → Creek	2.75%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.83%
River	Environmental → Aquatic → Freshwater → River	0.92%
Coastal	Environmental → Aquatic → Marine → Coastal	0.92%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	51.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	11.01%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	11.01%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	6.42%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	2.75%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.83%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.83%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.83%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.92%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.92%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.92%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.92%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	33.03%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	13.76%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	11.01%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	11.01%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	5.50%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.75%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	2.75%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.75%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.83%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.83%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.83%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.83%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.92%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment	0.92%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.92%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.92%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	0.92%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.92%
Freshwater And Marine	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine	0.92%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.92%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.92%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.92%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000756	Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011	Environmental	Open in IMG/M
3300000882	Freshwater microbial communities from the Columbia River	Environmental	Open in IMG/M
3300002274	Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002384	Freshwater microbial communities from Lake Mendota, WI - 08OCT2012 deep hole epilimnion	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300007550	Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009183	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011338	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Haengju	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017774	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017784	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.D.N	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300020157	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L224-25m	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020511	Freshwater microbial communities from Lake Mendota, WI - 15JUL2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020547	Freshwater microbial communities from Lake Mendota, WI - 05AUG2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020566	Freshwater microbial communities from Lake Mendota, WI - 13SEP2009 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021600	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L626-11m	Environmental	Open in IMG/M
3300021952	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 20-17 MG	Environmental	Open in IMG/M
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024512	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepC_0h	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027973	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027975	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028394	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300032093	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033992	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034020	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2015-rr0055	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034062	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045	Environmental	Open in IMG/M
3300034082	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Jun2015-rr0088	Environmental	Open in IMG/M
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034102	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034108	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157	Environmental	Open in IMG/M
3300034118	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME05Aug2017-rr0165	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034280	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME10Aug2009-rr0048	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12421J11937_100329376	3300000756	Freshwater And Sediment	VSVEQRILDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDAMRADLLLWRESK*
FwDRAFT_101817236	3300000882	Freshwater And Marine	VTLEERILRIIPVLDLPSDRNELRAIAMDVRKIEDRIKQLEEENDAMRADLLLWQEDKWRE*
B570J29581_1037822	3300002274	Freshwater	VTLEERILRMIPVLDLPPDRNELRAIAIDARKLEDRVKQLEQENDALRADLLLWNEKEVKL*
B570J29636_10043081	3300002384	Freshwater	VTLEERILRMIPVLDLPPDRNELRAIAIDARKLEDRVKQLEQENDALRADLLLWNEKEV
B570J40625_1000457531	3300002835	Freshwater	VSVEERILFLAESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWNEKEVKP
B570J40625_1000525731	3300002835	Freshwater	ERILRMIPVLDLPPDRNELRAIAIDARKLEDRVKQLEQENDALRADLLLWNEKEVKL*
B570J40625_1001601838	3300002835	Freshwater	VSIEQRILDLPAFADYNDRCQLRAIALDVRKLEDRVKQLEQENDALRADLLLWNGEGVKL
B570J40625_1002149508	3300002835	Freshwater	VSVEERILFLAESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWEEKEAKP
B570J40625_1003910225	3300002835	Freshwater	VSVEERILFLAESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWNEKEAKP
B570J40625_1011068103	3300002835	Freshwater	KQSQGGQAVTLEERILRMIPVLDLPPDRNELRAIAIDARKLEDRVKQLEQENDALRADLLLWNEKEVKL*
B570J40625_1015185683	3300002835	Freshwater	VAQSQGGQAVSVEERILFLAESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWEEKEAKP*
Ga0079957_13145631	3300005805	Lake	VSVEERILFLAESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWSEKEAKP
Ga0102880_11825832	3300007550	Estuarine	VTLEERILRIIPVLDLPSDRNELRAIAMDVRKIEDRIKQLEEENDAMRADLLLWREDKWRE*
Ga0102828_10380845	3300007559	Estuarine	VSVEERILFLAESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWDEKEAKP
Ga0114363_11085542	3300008266	Freshwater, Plankton	VTLEQRIINFAEKQNYYDSRELRAIALEVRKREDRIKQLEEENDALRADLLLWEQKEVKS
Ga0105098_100625351	3300009081	Freshwater Sediment	QGGQAVSVEERILFLAESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWNEKEVKP*
Ga0105091_100389401	3300009146	Freshwater Sediment	QSQGGQAVSVEERILFLAESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWNEKEVKP*
Ga0114980_101731332	3300009152	Freshwater Lake	VSVEQRILDLPAFADYNDRRELRAIALDVRKLEDRLKQLEQENDALRADLLLWNENEVK*
Ga0114977_102378653	3300009158	Freshwater Lake	VSVEQRILDLPAFADYNDRRELRAIALDVRKLEDRLKQLEEENDAMRADLLLWRESK*
Ga0105102_102560744	3300009165	Freshwater Sediment	MAQSQGGHAVSVAERILFLAESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWNEKEVKP*
Ga0105102_109253731	3300009165	Freshwater Sediment	MEQSQGGQAVSVEERILFLAESPDCNHPRELRAIALDVRKLEDRVKQLEQENDALRADLLLWNEKEVKL*
Ga0105097_103690943	3300009169	Freshwater Sediment	VEERILFLAESPDCNHPRELRAIAFQVRKLEDRIKQLESENDAMRADLLLWNGKEVKP*
Ga0105097_103820784	3300009169	Freshwater Sediment	GQAVSVEERILFLAESPDCNHPRELRAIALDVRKLEDRVKQLEQENDAMRADLLLWEEKDVKL*
Ga0105096_106354221	3300009170	Freshwater Sediment	QAVSVEERILFLAESPDCNHPRELRAIALDVRKLEDRVKQLEQENDAMRADLLLWNGKEVKP*
Ga0114974_1001986910	3300009183	Freshwater Lake	VSVEQRILDLPAFADYNDRRQLRAIAMDVRKMEDRIKQLETENDAMRADLLLWREGKP*
Ga0114967_100079431	3300010160	Freshwater Lake	ILDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDAMRADLLLWREDKWRE*
Ga0129336_101200253	3300010370	Freshwater To Marine Saline Gradient	VSIEQRILFLSEAPGCHHSRELRAIAFQVRKLEDRIKQLESENDALRADLLLWEEKEAKP
Ga0133913_129097772	3300010885	Freshwater Lake	VSVEERILDLPAFADYNDRRQLRAIALDVRKLEERVKQLEEENDAMRADLLLWREDKWRE
Ga0153699_157128	3300011338	Freshwater	VTLEQRILNIAEGPLDFPDCRELRAIALEVRKREDRIKQLESENDALRADLLLWEEKEAKP*
Ga0164293_1000254518	3300013004	Freshwater	LDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDAMRADLLLWREDK*
Ga0164293_101551585	3300013004	Freshwater	VSLEQRILTLSESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWSEKEAKP
Ga0164292_102414941	3300013005	Freshwater	MIPVLDLPSDQKELRAIALDARKLEDRVKQLEQENDALRADLLLWNEKEVKL*
Ga0164292_108139503	3300013005	Freshwater	AESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWSEKEAKP*
Ga0181344_10290023	3300017754	Freshwater Lake	VSVERRILTLSESPDCNHPRELRAIAFEVRKLEDRVKQLEQENDALRADLLLWDKAGIGFTTEDKL
Ga0181358_11555403	3300017774	Freshwater Lake	VSVEQRILDLPAFADYNDRCQLRAIAMDVRKLEDRIKQLETENDAMRADLLLWREDKWRE
Ga0181348_11194914	3300017784	Freshwater Lake	VSVEQRILDLPAFADYNDRRQLRAIALDVRKLEDRIKQLEEENDAMRADLVLWREAKP
Ga0181601_103237114	3300018041	Salt Marsh	VSVEQRILDLPAFADYNDRRQLRAIAMDVRKMEDRIKQLESENDALRADLLLWEEKEAKP
Ga0181606_102755691	3300018048	Salt Marsh	VSVEQRILDLPAFADYNDRRQLRAIAMDVRKMEDRIKQLETENDALRADLLLWNEKEVK
Ga0194049_10246684	3300020157	Anoxic Zone Freshwater	VSVEQRILDLPAFADYNDRRQLRAIAMDVRKLEDRIKQLEEENDAMRADLLLWREDK
Ga0208050_10027206	3300020498	Freshwater	VSVEQRILDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDAMRADLLLWNEKEAKP
Ga0208593_10025532	3300020511	Freshwater	VSLEQRILTLSESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWNEKELKL
Ga0208361_10039001	3300020547	Freshwater	TNGAIKLAESQGGQAVSVEQRILDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDAMRADLLLWNEKEAKP
Ga0208222_100219813	3300020566	Freshwater	VSLEQRILTLSESPDCNHPRELRAIALEVRKREDRIKQLESENDALRADLLLWEEKEAKP
Ga0194048_100048133	3300021519	Anoxic Zone Freshwater	VSVEQRILDLPAFADYNDRRQLRAIAMDVRKLEDRIKQLEEENDAMRADLLLWRESK
Ga0194059_11330603	3300021600	Anoxic Zone Freshwater	QRILDLPAFADYNDRRQLRAIAMDVRKLEDRIKQLEEENDAMRADLLLWREAK
Ga0213921_10164451	3300021952	Freshwater	IISESPDCNHPRELRAIAFEVRKLEDRVKQLEQENDAMRADLWCEEKEVNP
Ga0213922_10094107	3300021956	Freshwater	MSVEQRILIISESPDCNHPRELRAIAFEVRKLEDRVKQLEQENDALRADLLLWEEKECK
Ga0213922_10159817	3300021956	Freshwater	MSVEQRILIISESSDCNHPRELRAIAFEVRKLEDRVKQLEQENDALRADLWCEEKEVNP
Ga0222714_102965072	3300021961	Estuarine Water	VSVEQRILDLPAFADYNDRRELRAIAFEVRKLEDRVKQLEQENDALRADLLLWNEKEVNP
Ga0222713_107353271	3300021962	Estuarine Water	MSVEQRILIISEFSDCNHPRELRAIAFEVRKLEDRVKQLEQENDALRADLLLWREQEV
Ga0222712_101860502	3300021963	Estuarine Water	VSVEQRILDLPAFADYNDRRQLRAIAMDVRKLEDRVKQLEQENDAMRADLLLWREDKWRE
Ga0181353_10605694	3300022179	Freshwater Lake	VSVEQRILDLPAFADYNDRRELRAIAFEVRKLEDRIKQLEQENDALRADLLLWNEKEVRP
Ga0181353_10924043	3300022179	Freshwater Lake	VSVEQRILDLPAFADYNDRRQLRAIAMDVRKLEDRVKQLEQENDAMRADLLLWNEKEVNL
Ga0244775_104176575	3300024346	Estuarine	VSVEQRILDLPAFADYNDRRELRAIAFEVQKLEDRVKQLEEENDALRADLLLWNEKEVK
Ga0255186_10250492	3300024512	Freshwater	VSIEQRILLISESSDCNHPRELRAIAFEVRKLEDRVKQLEEENDSMRADLLLWEEKEVRP
Ga0209077_10447551	3300027675	Freshwater Sediment	QSQGGQAVSVEERILFLAESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWNEKEVKP
Ga0209077_10447555	3300027675	Freshwater Sediment	VSVEERILFLAESPDCNHPRELRAIALDVRKLEDRVKQLEQENDAMRADLLLWNGKEVKP
Ga0209704_10539512	3300027693	Freshwater Sediment	VSVEERILFLAESPDCNHPRELRAIALDVRKLEDRVKQLEQENDALRADLLLWNEKEVKL
Ga0209492_11963632	3300027721	Freshwater Sediment	VSVEERILFLAESPDCNHPRELRAIALDVRKLEDRVKQLEQENDAMRADLLLWEEKDVKL
Ga0209297_10666953	3300027733	Freshwater Lake	VSVEQRILDLPAFADYNDRRELRAIALDVRKLEDRLKQLEEENDAMRADLLLWRESK
Ga0209190_10150802	3300027736	Freshwater Lake	VSVEQRILDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEEENDAMRADLLLWREDKWRE
Ga0209597_10030463	3300027746	Freshwater Lake	VSVEQRILDLPAFADYNDRRQLRAIAMDVRKMEDRINQLETENDAMRADLLLWNEKEVKL
Ga0209596_10525062	3300027754	Freshwater Lake	VSVEERILDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEEENDAMRADLLLWREDKWRE
Ga0209596_11026726	3300027754	Freshwater Lake	VSVEQRILDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDAMRADLLLWREDKWRE
Ga0209296_10022003	3300027759	Freshwater Lake	VSVEQRILDLPAFADYNDRRQLRAIAMDVRKMEDRVKQLEQENDAMRADLLLWNEKEVKP
Ga0209296_101424710	3300027759	Freshwater Lake	VSVEQRILDLPAFADYNDRRQLRAIAMDVRKMEDRIKQLETENDAMRADLLLWREGKP
Ga0209134_101197153	3300027764	Freshwater Lake	VVETANFHSQRGQAVSVEQRILDLPAFADYNDRRQLRAIALDVRKLEDRIKQLEQENDAMRADLLLWSEKEVKL
Ga0209086_101493231	3300027770	Freshwater Lake	SKGGQAVSVEQRILDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEEENDAMRADLLLWREDKWRE
Ga0209253_101108336	3300027900	Freshwater Lake Sediment	VSVEERILFLSESPDCNHPRELRAIALDVRKLEDRIKQLEQENDAMRADLLLWSEKEVK
Ga0209298_101077633	3300027973	Freshwater Lake	VSVEQRILDLPAFADYNDRRELRAIALDVRKLEDRLKQLEQENDALRADLLLWNENEVK
Ga0209391_101821535	3300027975	Freshwater Sediment	RLAKSQGGQAVSVEERILFLAESPDCNHPRELRAIALDVRKLEDRVKQLEQENDAMRADLLLWEEKDVKL
Ga0247723_11382281	3300028025	Deep Subsurface Sediment	VSVEQRIINVAEKQNYYDSRELRAIAMDVRKLEDRIQQLETENDALRADLLLWNEKECK
Ga0304730_10313477	3300028394	Freshwater Lake	ILDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDAMRADLLLWREDKWRE
Ga0315901_108494831	3300031963	Freshwater	VSIEQRILFLSEAPGCHHSRELRAIAFQVRKLEDRIKQLEEENDAMRADLLLWREQEDK
Ga0315902_103760844	3300032093	Freshwater	ILFLSEAPGCHHSRELRAIAFQVRKLEDRIKQLEEENDAMRADLLLWREQEDKL
Ga0315268_101857701	3300032173	Sediment	RILDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEEENDAMRADLLLWREDKWRE
Ga0315268_107129612	3300032173	Sediment	VSVEQRILDLPAFADYNDRRQLRAIAMDVRNLEDRVKQLEQENDAMRADLLLWREDKWRE
Ga0334980_0005257_4808_4966	3300033816	Freshwater	MIPVLDLPPDRNELRAIAIDARKLEDRVKQLEQENDALRADLLLWNEKEVKL
Ga0334982_0054363_1158_1358	3300033981	Freshwater	MEGGQAVSVEERILFLAESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWEEKEAKP
Ga0334982_0245285_484_645	3300033981	Freshwater	LDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDAMRADLLLWNEKEVKL
Ga0334992_0021067_3612_3788	3300033992	Freshwater	VSIEDRILDLPAFADYNDRRQLRAIALDVRKMEDRIKQLEEENDAMRADLLLWREAKP
Ga0334992_0180743_3_212	3300033992	Freshwater	NDDQSKAHKLTEEQRILFLAESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWNEKEVKP
Ga0335003_0177074_412_621	3300033995	Freshwater	MAQSQGGQAVSVEQRIINVAEKQNYYDSRELRAIALEVRKLEDRIKQLEEENDAMRADLLLWSEKEVKL
Ga0334979_0000584_3652_3804	3300033996	Freshwater	LDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDAMRADLLLWREDK
Ga0334986_0080297_519_701	3300034012	Freshwater	VSVEQRILFLAESPDCNHPRELRAIAIDARKLEDRVKQLEQENDAMRADLLLWNEKEVKL
Ga0334998_0439249_142_303	3300034019	Freshwater	LDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDAMRADLLLWREDKWRE
Ga0335002_0132421_1452_1613	3300034020	Freshwater	LDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDAMRSDLMLWNEKEVKP
Ga0335002_0662687_194_379	3300034020	Freshwater	VTLEERILRMIPVLDLPPDRNELRAIAMDVRKLEDRINQLEEENDAMRADLLLWNEKEVK
Ga0335023_0030192_2526_2687	3300034050	Freshwater	LDLPAFADYNDRRQLRAIAMDVRKMEDRIKQLEEENDAMRADLLLWREDKWRE
Ga0334987_0045086_3196_3381	3300034061	Freshwater	VTLEERILRMIPVLDLPPDRNELRAIAIDARKLEDRVKQLEQENDALRADLLLWNEKEVR
Ga0334987_0531551_557_709	3300034061	Freshwater	MIPVLDLPSDQKELRAIAIDARKLEDRVKQLEQENDALRADLLLWNEKEVK
Ga0334995_0000465_2076_2285	3300034062	Freshwater	MEQSQGGQAVSVEERILFLAESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWNEKEVKP
Ga0335020_0015126_4269_4481	3300034082	Freshwater	MAQSQGGQAVTLEERILRMIPVLDLPPDRNELRAIAMDVRKLEDRIKQLEEENDAMRADLLLWNEKEVKL
Ga0335020_0017336_1600_1761	3300034082	Freshwater	LDLPAFADYNDRRQLRAIALDVHKLEDRVKQLEQENDAMRADLLLWREDKWRE
Ga0335020_0110785_146_301	3300034082	Freshwater	MIPVLDLPSDRNELRAIALDVRKLEDRVKQLEQENDAMRADLLLWNQKEVK
Ga0335022_0345737_542_751	3300034095	Freshwater	MAQSQGGQAVSVEQRILDLPAFADYNDRRELRAIALDVRKLEDRVKQLEQENDSMRADLLLWNEKEVKL
Ga0335027_0543784_296_451	3300034101	Freshwater	LDLPAFADYNDRRQLRAIAMDVRKLEDRIKQLEEENDAMRADLLLWRDTKP
Ga0335029_0003593_11336_11494	3300034102	Freshwater	LDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDAMRADLLLWRNTEAK
Ga0335031_0002861_392_574	3300034104	Freshwater	MSLEQRILTLSESPDCNHPRELRAIALEVRKREDRIKQLESENDALRADLLLWSEKEAKP
Ga0335031_0087477_2030_2206	3300034104	Freshwater	VEERILFLAESPDCNHPRELRAIAFQVRKLEDRIKQLESENDALRADLLLWEEKEAKP
Ga0335035_0089040_1458_1619	3300034105	Freshwater	LDLPAFADYNDRRQLRAIAMDVRKLEDRIKQLEEENDAMRADLLLWNEKEVKL
Ga0335036_0416004_363_524	3300034106	Freshwater	LDLPAFADYNDRRELRAIAFEVRKLEDRIKQLEAENDALRADLLLWNEKEVKL
Ga0335050_0070823_1667_1828	3300034108	Freshwater	LDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDSMRADLLLWNEKEVKL
Ga0335053_0185562_686_895	3300034118	Freshwater	MARSQGGKAVSVEQRILFLAESPDCNHPRELRAIAIDARKLEDRVKQLEQENDAMRADLLLWNEKEVKL
Ga0335017_0317572_675_836	3300034167	Freshwater	LDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDSMRADLLLWNEQEVKP
Ga0334997_0782321_296_454	3300034280	Freshwater	MIPVLDLPSDQKELRAIAIDARKLEDRVKQLEQENDALRADLLLWNEKEVKL
Ga0335007_0043190_3175_3330	3300034283	Freshwater	LDLPDFADYNDRRELRAIALDVRKLEDRVKQLEQENDSMRADLLLWGEAKP
Ga0335007_0180172_2_136	3300034283	Freshwater	LDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDAMRADLLL
Ga0335007_0278297_10_162	3300034283	Freshwater	LDLPAFADYNDRRQLRAIALDVRKLEDRVKQLEQENDAMRADLLLWMESK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088293

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences