Metagenome / Metatranscriptome Family F088259

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088259
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	85 residues
Representative Sequence	SDDPLYYRGDLNRGQIPEPFWFLRQALKQGSDFSNIGLFNDDPQTTHEQVLELLKSAIELVESEMKQNVQDRSDDRAA
Number of Associated Samples	73
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.42 %
% of genes near scaffold ends (potentially truncated)	92.66 %
% of genes from short scaffolds (< 2000 bps)	98.17 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.220 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (73.394 % of family members)
Environment Ontology (ENVO)	Unclassified (73.394 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.03% β-sheet: 0.00% Coil/Unstructured: 58.97%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13328	HD_4	25.69
PF06941	NT5C	21.10
PF07690	MFS_1	0.92
PF03592	Terminase_2	0.92
PF05656	DUF805	0.92
PF05099	TerB	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	21.10
COG3152	Uncharacterized membrane protein YhaH, DUF805 family	Function unknown [S]	0.92
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	0.92
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.22 %
Unclassified	root	N/A	35.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.22 %
Unclassified	root	N/A	35.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.22 %
Unclassified	root	N/A	35.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.78 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	20.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.78 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	19.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.78 %
Balneolaeota	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota	16.51 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.75 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.83 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.78 %
Balneolia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia	16.51 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	2.75 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	1.83 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.78 %
Balneolales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales	16.51 %
Marinilabiliales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales	2.75 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1.83 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.78 %
Balneolaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae	16.51 %
Marinifilaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Marinifilaceae	2.75 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1.83 %
Rhodobacteraceae bacterium HIMB11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.78 %
Aliifodinibius	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius	16.51 %
Labilibaculum	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Marinifilaceae → Labilibaculum	2.75 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1.83 %
Rhodobacteraceae bacterium HIMB11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.78 %
Aliifodinibius saliphilus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	16.51 %
Labilibaculum antarcticum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Marinifilaceae → Labilibaculum → Labilibaculum antarcticum	2.75 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1.83 %
Rhodobacteraceae bacterium HIMB11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000928\|OpTDRAFT_10066220	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300001344\|JGI20152J14361_10050253	Not Available	1105	Open in IMG/M
3300001348\|JGI20154J14316_10023274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3326	Open in IMG/M
3300001778\|ACM18_1051007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1361	Open in IMG/M
3300008012\|Ga0075480_10626818	Not Available	507	Open in IMG/M
3300009074\|Ga0115549_1196142	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300009077\|Ga0115552_1439764	Not Available	513	Open in IMG/M
3300009433\|Ga0115545_1146247	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	827	Open in IMG/M
3300009434\|Ga0115562_1265746	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300009442\|Ga0115563_1236964	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300009442\|Ga0115563_1298111	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	589	Open in IMG/M
3300009467\|Ga0115565_10350480	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300009476\|Ga0115555_1167440	Not Available	916	Open in IMG/M
3300009496\|Ga0115570_10431557	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	558	Open in IMG/M
3300009508\|Ga0115567_10102112	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300016797\|Ga0182090_1695542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1305	Open in IMG/M
3300017818\|Ga0181565_10340441	Not Available	1000	Open in IMG/M
3300017818\|Ga0181565_10530030	Not Available	762	Open in IMG/M
3300017824\|Ga0181552_10352870	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300017949\|Ga0181584_10414659	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	841	Open in IMG/M
3300017950\|Ga0181607_10336291	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Marinifilaceae → Labilibaculum → Labilibaculum antarcticum	839	Open in IMG/M
3300017950\|Ga0181607_10423256	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300017951\|Ga0181577_10229103	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300017951\|Ga0181577_10487060	Not Available	773	Open in IMG/M
3300017951\|Ga0181577_10493134	Not Available	767	Open in IMG/M
3300017951\|Ga0181577_10971904	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	501	Open in IMG/M
3300017956\|Ga0181580_10126266	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300017956\|Ga0181580_10739999	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300017957\|Ga0181571_10251095	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300017957\|Ga0181571_10408909	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Marinifilaceae → Labilibaculum → Labilibaculum antarcticum	840	Open in IMG/M
3300017957\|Ga0181571_10564225	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	691	Open in IMG/M
3300017958\|Ga0181582_10737008	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300017962\|Ga0181581_10614368	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	661	Open in IMG/M
3300017964\|Ga0181589_10422476	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300017964\|Ga0181589_10496363	Not Available	789	Open in IMG/M
3300017964\|Ga0181589_10629568	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	679	Open in IMG/M
3300017968\|Ga0181587_10723095	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	627	Open in IMG/M
3300017968\|Ga0181587_10863215	Not Available	562	Open in IMG/M
3300017985\|Ga0181576_10347817	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300017986\|Ga0181569_10247705	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300017986\|Ga0181569_10693829	Not Available	674	Open in IMG/M
3300018036\|Ga0181600_10515848	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300018039\|Ga0181579_10422794	Not Available	716	Open in IMG/M
3300018039\|Ga0181579_10543966	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300018041\|Ga0181601_10196644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium HIMB11	1188	Open in IMG/M
3300018041\|Ga0181601_10214413	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	1120	Open in IMG/M
3300018041\|Ga0181601_10327893	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300018048\|Ga0181606_10113430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1685	Open in IMG/M
3300018048\|Ga0181606_10232368	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300018048\|Ga0181606_10662627	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300018049\|Ga0181572_10094915	All Organisms → cellular organisms → Bacteria → Proteobacteria	1966	Open in IMG/M
3300018415\|Ga0181559_10591948	Not Available	599	Open in IMG/M
3300018415\|Ga0181559_10660772	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300018418\|Ga0181567_10197473	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300018418\|Ga0181567_10889983	Not Available	560	Open in IMG/M
3300018418\|Ga0181567_11027775	Not Available	514	Open in IMG/M
3300018418\|Ga0181567_11065894	Not Available	502	Open in IMG/M
3300018423\|Ga0181593_10657201	All Organisms → cellular organisms → Bacteria → FCB group	748	Open in IMG/M
3300018423\|Ga0181593_10724001	Not Available	703	Open in IMG/M
3300018423\|Ga0181593_10973212	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	583	Open in IMG/M
3300018423\|Ga0181593_11071825	Not Available	550	Open in IMG/M
3300018423\|Ga0181593_11234231	Not Available	502	Open in IMG/M
3300018424\|Ga0181591_11083470	Not Available	540	Open in IMG/M
3300018426\|Ga0181566_10271596	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300018426\|Ga0181566_10346526	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	1066	Open in IMG/M
3300018426\|Ga0181566_10606271	Not Available	760	Open in IMG/M
3300018426\|Ga0181566_11003420	Not Available	562	Open in IMG/M
3300018426\|Ga0181566_11139063	Not Available	522	Open in IMG/M
3300018428\|Ga0181568_10312303	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300018876\|Ga0181564_10273042	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300019459\|Ga0181562_10170380	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	1166	Open in IMG/M
3300019459\|Ga0181562_10574695	Not Available	529	Open in IMG/M
3300020056\|Ga0181574_10282556	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Marinilabiliales → Marinifilaceae → Labilibaculum → Labilibaculum antarcticum	1019	Open in IMG/M
3300020056\|Ga0181574_10433231	Not Available	757	Open in IMG/M
3300020166\|Ga0206128_1248075	Not Available	656	Open in IMG/M
3300020173\|Ga0181602_10301373	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300020188\|Ga0181605_10393906	Not Available	551	Open in IMG/M
3300020191\|Ga0181604_10379070	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300020194\|Ga0181597_10383099	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	597	Open in IMG/M
3300020207\|Ga0181570_10485953	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	571	Open in IMG/M
3300020595\|Ga0206126_10478464	Not Available	538	Open in IMG/M
3300021335\|Ga0213867_1290980	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300022921\|Ga0255765_1256638	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300022921\|Ga0255765_1385088	Not Available	520	Open in IMG/M
3300022925\|Ga0255773_10337889	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	598	Open in IMG/M
3300022927\|Ga0255769_10142101	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300022939\|Ga0255754_10288425	Not Available	781	Open in IMG/M
3300023081\|Ga0255764_10493636	Not Available	507	Open in IMG/M
3300023087\|Ga0255774_10451748	Not Available	562	Open in IMG/M
3300023108\|Ga0255784_10196112	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300023108\|Ga0255784_10295504	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300023119\|Ga0255762_10540715	Not Available	537	Open in IMG/M
3300023170\|Ga0255761_10332838	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300023173\|Ga0255776_10617360	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300023175\|Ga0255777_10297054	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	916	Open in IMG/M
3300023175\|Ga0255777_10341835	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Aliifodinibius → Aliifodinibius saliphilus	830	Open in IMG/M
3300023273\|Ga0255763_1244238	Not Available	674	Open in IMG/M
3300024301\|Ga0233451_10369016	Not Available	528	Open in IMG/M
3300025640\|Ga0209198_1121809	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300025653\|Ga0208428_1191729	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300025694\|Ga0209406_1073566	Not Available	1212	Open in IMG/M
3300025699\|Ga0209715_1064233	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300025699\|Ga0209715_1239597	Not Available	540	Open in IMG/M
3300025704\|Ga0209602_1099909	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300025809\|Ga0209199_1037503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2602	Open in IMG/M
3300025832\|Ga0209307_1188389	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300025860\|Ga0209119_1228308	Not Available	703	Open in IMG/M
3300025869\|Ga0209308_10087059	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300025881\|Ga0209309_10291187	Not Available	740	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	73.39%
Pelagic	Environmental → Aquatic → Marine → Pelagic	19.27%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	3.67%
Coastal	Environmental → Aquatic → Marine → Coastal	2.75%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.92%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	73.39%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	19.27%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	3.67%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	73.39%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	17.43%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	2.75%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.83%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.83%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.92%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.92%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000928	Marine plume microbial communities from the Columbia River - 25 PSU	Environmental	Open in IMG/M
3300001344	Pelagic Microbial community sample from North Sea - COGITO 998_met_02	Environmental	Open in IMG/M
3300001348	Pelagic Microbial community sample from North Sea - COGITO 998_met_04	Environmental	Open in IMG/M
3300001778	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM18, ROCA_DNA027_0.2um_3g	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009442	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009476	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300016797	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041408BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018039	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020166	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1	Environmental	Open in IMG/M
3300020173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041408US metaG (spades assembly)	Environmental	Open in IMG/M
3300020188	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041411US metaG (spades assembly)	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020207	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300021335	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540	Environmental	Open in IMG/M
3300022921	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300022927	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG	Environmental	Open in IMG/M
3300022939	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG	Environmental	Open in IMG/M
3300023081	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG	Environmental	Open in IMG/M
3300023087	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG	Environmental	Open in IMG/M
3300023108	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG	Environmental	Open in IMG/M
3300023119	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG	Environmental	Open in IMG/M
3300023170	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG	Environmental	Open in IMG/M
3300023173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG	Environmental	Open in IMG/M
3300023175	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG	Environmental	Open in IMG/M
3300023273	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG	Environmental	Open in IMG/M
3300024301	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504CT (spades assembly)	Environmental	Open in IMG/M
3300025640	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519 (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300025699	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025832	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530 (SPAdes)	Environmental	Open in IMG/M
3300025860	Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)	Environmental	Open in IMG/M
3300025869	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 (SPAdes)	Environmental	Open in IMG/M
3300025881	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OpTDRAFT_100662203	3300000928	Freshwater And Marine	INGALFEVGTPNYHMPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKARSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA*
JGI20152J14361_100502534	3300001344	Pelagic Marine	DDPLYYRGDLQRGQIPEPFWFVRQALKVRSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA*
JGI20154J14316_100232743	3300001348	Pelagic Marine	MKQGQSYCINGALFEVGTPNYQMPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKARSTYNNVGLFNDDPETTHEQVLELLKSSIALVEGEIEQRSAQRTIECAA*
ACM18_10510074	3300001778	Marine Plankton	MPDDYVSDDPLYYRGDLIRGQIPEPFWFLRQALKQETHYSNIGLFNDDPETTHEQVLELLKSAIELVESEMKQSLQDRSDDRAA*
Ga0075480_106268182	3300008012	Aqueous	MKQGQSYCINGALFEVGTPNYQMPDDYVSDDPLYYRGDLNRGQVPEPFWFLRQALKKRSEFSNIGLFNDDPETTHHQVLELLKSAIELVECEMKQSVQGRLDDRAA*
Ga0115549_11961422	3300009074	Pelagic Marine	CINGALFEVGTPNHQMPEDYVSDDPLYYRGDLQRGQIPEPFWFLRQALKARSTYNNVGLFNDDPETTHEQVLELLKSSIALVEGEIEQRSAQRTIECAA*
Ga0115552_14397641	3300009077	Pelagic Marine	MPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKARSTYNNVGLFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA*
Ga0115545_11462473	3300009433	Pelagic Marine	YYRGDLQRGQIPEPFWFLRQALKVRSTYDNVGHFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA*
Ga0115562_12657461	3300009434	Pelagic Marine	VSDDPLYYRGDLQRGQIPEPFWFVRQALKARSTYNNVGLFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA*
Ga0115563_12369643	3300009442	Pelagic Marine	GTPNYQMPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKVRSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEIEQRSAQRTNECAA*
Ga0115563_12981111	3300009442	Pelagic Marine	QMPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKARSTYNNVGLFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA*
Ga0115565_103504801	3300009467	Pelagic Marine	MPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKARSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEIEQRSAQRTNECAA*
Ga0115555_11674401	3300009476	Pelagic Marine	PLYYRGDLQRGQIPEPFWFVRQALKVRSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA*
Ga0115570_104315573	3300009496	Pelagic Marine	YVSDDPLYYRGDLQRGQIPEPFWFVRQALKVRSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA*
Ga0115567_101021121	3300009508	Pelagic Marine	HSYCINGALFEVGTPNYQMPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKVRSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA*
Ga0182090_16955421	3300016797	Salt Marsh	GSMKQGQSYCINGALFEVGTPNYQMPEDYVSDDPLYYRGDLQRGQIPEPFWFLRQALKARSTYNNVGLFNDDPETTHEQVLELLKSSIALVEGEIEQRSAQRTIECAA
Ga0181565_103404414	3300017818	Salt Marsh	SDDPLYYRGDLNRGQIPEPFWFLRQALKQGSDFSNIGLFNDDPQTTHEQVLELLKSAIELVESEMKQNVQDRSDDRAA
Ga0181565_105300303	3300017818	Salt Marsh	LYYRGDLNRGQIPEPFWFLRQALKQVSDISNIGLFNDDAETTHEQVLELLKSAIELVESEMKQGVQERLDDRAA
Ga0181552_103528701	3300017824	Salt Marsh	YRGDLNRGQIPEPFWFLRQALKQVSDISNIGLFNDDAETTHEQVLELLKSAIELVESEMKQSVQDRLDDFAA
Ga0181584_104146591	3300017949	Salt Marsh	NRGQIPEPFWFLRQALKQETHYSNIGLFNDDPDTTHEQVLGLLKSAIELVEAEMKQSVQDRLDDRAA
Ga0181607_103362911	3300017950	Salt Marsh	MKQGQRYCINGALFEVGTPNYQMPDDYVSDDPLYYRGDLNRGQIPEPFWFLRQALKQVSDFSNIGLFNDDPQTTHDQVLELMKSAIELVESEMKQSLHDRLDDRAA
Ga0181607_104232563	3300017950	Salt Marsh	YYRGDLQRGQIPEPFWFVRQALKVRSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA
Ga0181577_102291031	3300017951	Salt Marsh	NYKMPADYVSDDPLYYRGDLNRGQIPEPFWFLRQALKQATNFSNIGLFNDDPETIHEQVLELLKSAIELVESEMKQSLQDRLDDRAA
Ga0181577_104870603	3300017951	Salt Marsh	YRGDLNRGQIPEPFWFLRQALKERSEFSNIGLFNDDPETTHDQVLELLKSAIELVESEMKQSVQDRLYDRAA
Ga0181577_104931341	3300017951	Salt Marsh	YISDDPLYYRGDLNRGQIPEPFWFLRQALKQETQYSNIGLFNDDPDTTHEQVLELLKSAIELVESEMKQNVQHRPDDRSA
Ga0181577_109719043	3300017951	Salt Marsh	LYYRGDLNRGQIPEPFWFLRQALKQGSDFTNIGLFNDDPETKHEQVMQLLKSAIELVESEMKQSVQDRSDDRAA
Ga0181580_101262662	3300017956	Salt Marsh	MKQGQSYCINGALFEVGTPNYKMPDDYVSDDPLYYRGDLNRGQIPEPFWFLRQALKQATNFSNIGLFNDDSETTHEQVLELLKSAIELVESEMKQSLQDRLDDRAA
Ga0181580_107399991	3300017956	Salt Marsh	DDPLYYRGDLNRGQIPEPFWFLRQALKQESDFTNIGLFNDDPETTHEQILELLKSAIELVESEMKQSAQDRLDDRAA
Ga0181571_102510951	3300017957	Salt Marsh	TPNYKMPDDYVSDDPLYYRGDLNRGQIPEPFWFLRQALKQATNFSNIGLFNDDSETTHEQVLELLKSAIELVESEMKQSLQDRLDDRAA
Ga0181571_104089093	3300017957	Salt Marsh	NRGQIPEPFWFLRQALKERSEFSNIGLFNDDPETKHEQVMQLLKSAIELVESEMKQSVQDRLYDRAA
Ga0181571_105642251	3300017957	Salt Marsh	SYCINGALFEVGTPNYKMPDDYISDDPLYYRGDLNRGQIPEPFWFLRQAIKQESDFSNIGLFNDDPETTHEQVLELLKSAIELVESEMKQSVQGRLDDYAA
Ga0181582_107370083	3300017958	Salt Marsh	MKQGQRFCINGALFEVGTPNYKMPDDYVSNDPLYYRGDLNRGQIPEPFWFLRQALKQGSHFTNIGLFNDDPETKHEQVMQLLKSAIELVESEMKQSVQDRLDDRAA
Ga0181581_106143683	3300017962	Salt Marsh	LYYRGDLNRGQIPEPFWFLRQALKQETHYSNIGLFNDDPDTTHEQVLCLLKSAIELVEAEMKQSVQDRLDDRAA
Ga0181589_104224761	3300017964	Salt Marsh	NGALFEVGTPNYKMPDDYVSDDPLYYRGDLNRGQIPEPFWFLRQALKQATNFSNIGLFNDDSETTHEQVLELLKSAIELVESEMKQSLQDRLDDRAA
Ga0181589_104963633	3300017964	Salt Marsh	DDYISDDPLYYRGDLNRGQIPEPFWFLRQAIKQESDFSNIGLFNDDPETTHEQVLELLKSAIELVESEMKQSVQGRLDDYAA
Ga0181589_106295681	3300017964	Salt Marsh	QGQSYCINGALFEVGTPNYKMPDDYISDDPLYYRGDLNRGQIPEPFWFLRQALKQETHYSNIGLFNDDPDTTHEQVLELLKSAIEFVESEMKQSVQDRLDDRAA
Ga0181587_107230951	3300017968	Salt Marsh	RGQIPEPFWFLRQALKQGSDFSNIGLFNDDPQTTHEQVLELLKSAIELVESEMKQNVQDRSDDRAA
Ga0181587_108632152	3300017968	Salt Marsh	GQSYCINGALFEVGTPNYKMPDDYISDDPLYYRGDLNRGQIPEPFWFLRQALKQVSDISNIGLFNDDAETTHEQVLELLKSAIELVESEMKQGVQERLDDRAA
Ga0181576_103478171	3300017985	Salt Marsh	DLNRGQIPEPFWFLRQALKQATNFSNIGLFNDDPETIHEQVLELLKSAIELVESEMKQSLQDRLDDRAA
Ga0181569_102477053	3300017986	Salt Marsh	SDDPLYYRGDLNRGQIPEPFWFLRQALKQVSDFSNIGLFNDDPQTTHDQVLELMKSAIELVESEMKQSLQDRLDDRAA
Ga0181569_106938292	3300017986	Salt Marsh	DDLLYYRGDLNRGQIPEPFWFLRQALKQGSDFTNIGLSNDDPETTHEQVMQLLKSAIELVESEMKQSVQDRSYNLAA
Ga0181600_105158481	3300018036	Salt Marsh	MPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKVRSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEIEQRSAQRTIECAA
Ga0181579_104227941	3300018039	Salt Marsh	YRGDLNRGQIPEPFWFLRQAIKQESDFSNIGLFNDDPETTHEQVLELLKSAIELVESEMKQNVQDRSDDRAA
Ga0181579_105439663	3300018039	Salt Marsh	ALFEVGTPNYRMPDDYVSDDPLYYRGDLNRGQIPEPFWFLRQALKERSEFSNIGLFNDDPETTHDQVLELLKSAIELVEYEMKQSLQDRSDDRAA
Ga0181601_101966443	3300018041	Salt Marsh	PNYKMPDDYISDDPLYYRGDLNRGQIPEPFWFLRQALKERSGFSNIGLFNDDPETTHHQVLELLKSAIELVEAEMKQSVQDRSDYHAA
Ga0181601_102144134	3300018041	Salt Marsh	PEDYVSDDPLYYRGDLQRGQIPEPFWFLRQALKVRSTYDNVGHFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA
Ga0181601_103278932	3300018041	Salt Marsh	DLNRGQIPEPFWFLRQALKQATNFSNIGLFNDDPETTHEQVLELLKSAIELVESEMKQSLQDRLDDRAA
Ga0181606_101134301	3300018048	Salt Marsh	QIPEPFWFLRQALKERSGFSNIGLFNDDPETTHHQVLELLKSAIELVEAEMKQSVQDRSDYHAA
Ga0181606_102323681	3300018048	Salt Marsh	YRGDLNRGQIPEPFWFLRQALKQGTDFTNIGLFNDDPDTTYEQVLELLKSAIELVESEMKHSVQDRLDDCAA
Ga0181606_106626273	3300018048	Salt Marsh	GDLNRGQIPEPFWFLRQALKQESDFTNIGLFNDDPETTHEQVLELLKSAIELVESEMKQSAQDRLDDRAA
Ga0181572_100949151	3300018049	Salt Marsh	YYRGDLNRGQIPEPFWFLRQALKQGSHYSNIGLFNDDPETTHEQVLELLKSAIELVEYEMKQSLQDRSDDRAA
Ga0181559_105919481	3300018415	Salt Marsh	KGSMKQGESYCINGALFEVGTPNYKMPDDYVSDDPVYYRGDLNRGQIPEPFWFLRQAIKQESDFSNIGLFNDDPETTHEQVLELLKSAIELVESEMKQSVQGRLDDYAA
Ga0181559_106607721	3300018415	Salt Marsh	PEPFWFLRQALKQETHYSNIGLFNDDPDTTHEQVLYLLKSAIELVEAEMKQSVQDRLDDRAA
Ga0181567_101974731	3300018418	Salt Marsh	PLYYRGDLNRGQIPEPFWFLRQALKQATNFSNIGLFNDDSETTHEQVLELLKSAIELVESEMKQSLQDRLDDRAA
Ga0181567_108899832	3300018418	Salt Marsh	QRYCINGALFEVGTPNYKMPADYVSDDPQYYRGDLNRGQIPEPFWFLRQALKQESDFTNIGLFNDDPETTHEQVLELLKSAIELVECEMKQSVQGRLDDYAA
Ga0181567_110277751	3300018418	Salt Marsh	VGTPNYKMPDDYVSDDPLYYRGDLFRGQIPEPFWFLRQALKQVSDFTNIGLFNDDPETTHEQVLEILKSAIELVECEMRQSVQDRLDNLAA
Ga0181567_110658941	3300018418	Salt Marsh	MPDDYVSDDPLYYRGDLNRGQIPEPFWFLRQALKQGSQFTNIGLFNDDPETKHEQVMQLLKSAIELVESEMKQSVQDRLDDRAA
Ga0181593_106572013	3300018423	Salt Marsh	WFLRQALKERSEFSNIGLFNDDPETTHDQVLELLKSAIELVESEIKHSVQDRLDDCAA
Ga0181593_107240011	3300018423	Salt Marsh	KMGRLKALKQETHYSNIGLFNDDPDTTHEQVLCLLKSAIELVEAEMKQSVQDRIDDRAA
Ga0181593_109732123	3300018423	Salt Marsh	PLYYRGDLNRGQIPEPFWFLRQALKQGSDFSNIGLFNDDPQTTHEQVLELLKSAIELVESEMKQNVQDRSDDRAA
Ga0181593_110718252	3300018423	Salt Marsh	CKGSMKQGQRYCINGALFEVGTPNYEMPDDYVSDDPLYYRGDLNRGQIPEPFWFLRQALNQESDFTNIGLFNDDPETTHEQVLELLKSAIELVESEMKQSAQDRLDDRAA
Ga0181593_112342313	3300018423	Salt Marsh	SDDPLYYRGDLNRGQIPEPFWFLRQALKQGSDYTNIGLFNDDPETKHEQVMQLLKSAIELVESEMKQSVQDRLYDRAA
Ga0181591_110834701	3300018424	Salt Marsh	SYCINGALFEVGTPNYKMPDDYISDDPLYYRGDLNRGQIPEPFWFLRQALKQVSDISNIGLFNDDAETTHEQVLELLKSAIELVESEMKQGVQERLDDRAA
Ga0181566_102715964	3300018426	Salt Marsh	LFEVGTPNYQMPDDYVSDDPLYYRGDLNRGQIPEPFWFLRQALKQVSDFSNIGLFNDDPQTTHDQVLELMKSAIELVESEMKQSLHDRLDDRAA
Ga0181566_103465264	3300018426	Salt Marsh	DLNRGQIPEPFWFLRQALKQESDFTNIGLFNDDPETTHEQVMQLLKSAIELVESEMKQSVQDRSYDLSA
Ga0181566_106062711	3300018426	Salt Marsh	GALFEVGTPNYRMPDDYVSDDPQYYRGDLNRGQIPEPFWFLRQALKQGSHYSNIGLFNDDPETTHEQVISLLKSAIELVKSEMKQSVQDWLDDCAA
Ga0181566_110034201	3300018426	Salt Marsh	MKQGQSYCINGALFEVGTPNYKMPDDYVSDEPLYYRGDLIRGQIPEPFWFLRQALKQGSDFTNIGLFNDDPETTHEQVLEILKSAIELVECEMRQSVQDRLDNLAA
Ga0181566_111390631	3300018426	Salt Marsh	VGTPNYKMPADYVSDDPLYYRGDLNRGQIPEPFWFLRQALKERSEFSNIGLFNDDPETTHDQVLELLKSAIELVEYEMKQSLQDRSDDRAA
Ga0181568_103123031	3300018428	Salt Marsh	NRGQIPEPFWFLRQALKQGSHFTNIGLFNDDPETKHEQVMQLLKSAIELVESEMKQSVQDRLDDRAA
Ga0181564_102730423	3300018876	Salt Marsh	DDPLYYRGDLNRGQIPEPFWFLRQVLTQGSDFSNVGLFNDDPETTHEQVLELLKSAIELVESEMKQSAQDRLDDRAA
Ga0181562_101703801	3300019459	Salt Marsh	MPDDYVSDDPLYYRGDLNRGQIPEPFWFLRQALKQGSDFTNIGLFNDDPETKHEQVMQLLKSAIELVESEMKQSVQDRLDDRAA
Ga0181562_105746951	3300019459	Salt Marsh	MKQGQSYCINGALFEVGTPNYKMPDDYISDDPLYYRGDLNRGQIPEPFWFLRQALKQGSDFSNIGLFNDDPATTHEQVLELLKSAIELVESEMKQSVQDRLDDRAA
Ga0181574_102825564	3300020056	Salt Marsh	GTPNYQMPDDYVSDDPLYYRGDLNRGQIPEPFWFLRQALKQGSDFSNIGLFNDDPQTTHEQVLELLKSAIELVESEMKQNVQDRSDDRAA
Ga0181574_104332311	3300020056	Salt Marsh	LNRGQIPEPFWFLRQALKQETNYLNIGLFNDDPDTTHEQVLELLKSAIELVESEMKQSVQDRLDDRAA
Ga0206128_12480751	3300020166	Seawater	MKLGHSYCINGALFEVGTPNYQMPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKVRSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEK
Ga0181602_103013732	3300020173	Salt Marsh	CQGSMKQGQSYCINGALFEVGTPNYQMPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKVRSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEIEQRSAQRTIECAA
Ga0181605_103939061	3300020188	Salt Marsh	LYYRGDLNRGQIPEPFWFLRQALKQGSDFTNIGLFNDDPETKHEQVMQLLKSAIELVESEMKQSVQDRLDDRAA
Ga0181604_103790701	3300020191	Salt Marsh	NGALFEVGTPNYHMPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKARSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEIEQRSAQRTNECAA
Ga0181597_103830991	3300020194	Salt Marsh	DPLYYRGDLQRGQIPEPFWFVRQALKARSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEIEQRSAQRTNECAA
Ga0181570_104859531	3300020207	Salt Marsh	PLYYRGDLNRGQIPEPFWFLRQALKQETHYSNIGLFNDDPDTTHEQVLELLKSAIELVESEMKQSVQDRLDDRAA
Ga0206126_104784643	3300020595	Seawater	VGTPNYQMPEDYVSDDPLYYRGDLQRGQIPEPFWFLRQALKVRSTYDNVGHFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA
Ga0213867_12909803	3300021335	Seawater	NRGQIPEPFWFLRQALKERSEFSNIGLFNDDPETTHEQVLELLKSAIELVEAEMKQSVQDRSDDRAA
Ga0255765_12566381	3300022921	Salt Marsh	INGALFEVGTPNYKMPDDYISDDPLYYRGDLNRGQIPEPFWFLRQALKQGSDFTNIGLFNDDPETKHEQVMQLLKSAIELVESEMKQSVQERLDDCAA
Ga0255765_13850881	3300022921	Salt Marsh	MKQGQSYCINGALFEVGTPNYQMPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKVRSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA
Ga0255773_103378892	3300022925	Salt Marsh	YISDDPLYYRGDLNRGQIPEPFWFLRQALKQETHYSNIGLFNDDPDTTHEQVLELLKSAIELVESEMKQSVQDRLDDRAA
Ga0255769_101421014	3300022927	Salt Marsh	PNDYVSDDPLYYRGDLNRGQIPEPFWFLRQALKQGTDFTNIGLFNDDPDTTYEQVLELLKSAIELVESEMKHSVQDRLDDCAA
Ga0255754_102884251	3300022939	Salt Marsh	EVGTPNYKMPADYVSDDPLYYRGDLNRGQIPEPFWFLRQALKQGSDFSNIGLFNDDPQTTHEQVLELLKSAIELVESEMKQSVQDRLDDRAA
Ga0255764_104936361	3300023081	Salt Marsh	CKGSMKQGQRFCVNGALFEVGTPNYQMPDDYVSDDPLYYRGDLNRGQIPEPFWFLRQALKQGSDFTNIGLFNDDPETKHEQVMQLLKSAIELVESEMKQSVQDRLYDRAA
Ga0255774_104517481	3300023087	Salt Marsh	MPDDYISDDLLYYRGDLNRGQIPEPFWFLRQALKQGSDFTNIGLFNDDPETTHEQVMQLLKSAIELVESEMKQSVQDRSYDLSA
Ga0255784_101961121	3300023108	Salt Marsh	KVGTPNYKMPADYVSDDPLYYRGDLNRGQIPEPFWFLRQALKERSEFSNIGLFNDDPETTHDQVLELLKSAIELVEYEMKQSLQDRSDDRAA
Ga0255784_102955041	3300023108	Salt Marsh	DLNRGQIPEPFWFLRQALKQATNFSNIGLFNDDPETIHEQVLELLKSAIELVESEMKQSLQDRLDDRAAKIKSSAISEWRWGL
Ga0255762_105407152	3300023119	Salt Marsh	LFEVGTPNYKMPADYVSDDPLYYRGDLNRGQIPEPFWFLRQALKERSEFSNIGLFNDDPETTHDQVLELLKSAIELVEYEMKQSLQDRSDDRAA
Ga0255761_103328383	3300023170	Salt Marsh	GQSYCINGALFEVGTPNYEMPDDYVSDDPLYYRGDLNRGQIPEPFWFLRQALKQGSHFTNIGLFNDDPETTHEQVLELLKSAIELVECEMKQSVQDRSDDRAA
Ga0255776_106173603	3300023173	Salt Marsh	QYYRGDLNRGQIPEPFWFLRQALKQGSDITNIGLFNDDPETKHEQVMQLLKSAIELVESEMKQSVQDRLYDRAA
Ga0255777_102970543	3300023175	Salt Marsh	IPEPFWFLRQALKQESDFTNIGLFNDDPETTHEQVMQLLKSAIELVESEMKQSVQDRSYDLSA
Ga0255777_103418353	3300023175	Salt Marsh	YRGDLNRGQIPEPFWFLRQAIKQESDFSNIGLFNDDPETTHEQVLELLKSAIELVESEMKQSVQDRLDDRAA
Ga0255763_12442381	3300023273	Salt Marsh	ISDDPLYYRGDLNRGQIPEPFWFLRQALKQGSDFSNIGLFNDDPATTHEQVLELLKSAIEFVESEMKQSVQDRSDDRAA
Ga0233451_103690161	3300024301	Salt Marsh	TPNYRMPDDYVSDDPQYYRGDLNRGQIPEPFWFLRQALKQGSDFTNIGLFNDDPETKHEQVMQLLKSAIELVESEMKQSVQDRLDDRAA
Ga0209198_11218092	3300025640	Pelagic Marine	KQGHSYCINGALFEVGTPNYHMPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKARSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEIEQRSAQRTNECAA
Ga0208428_11917291	3300025653	Aqueous	PEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKVRSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA
Ga0209406_10735664	3300025694	Pelagic Marine	INGALFEVGTPNYQMPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKVRSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA
Ga0209715_10642331	3300025699	Pelagic Marine	QRGQIPEPFWFVRQALKVRSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA
Ga0209715_12395971	3300025699	Pelagic Marine	WCQGSMKQGQSYCINGALFEVGTPNYQMPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKVRSTYDNVGLFNDDPETTHEQVLELLKSSIALVEGEIEQRSAQRTIECAA
Ga0209602_10999093	3300025704	Pelagic Marine	VGTPNYQMPEDYVSDDPLYYRGDLQRGQIPEPFWFLRQALKARSTYNNVGLFNDDPETTHEQVLELLKSSIALVEGEIEQRSAQRTIECAA
Ga0209199_10375035	3300025809	Pelagic Marine	QGSMKQGQSYCINGALFEVGTPNYQMPEDYVSDDPLYYRGDLQRGQIPEPFWFLRQALKARSTYNNVGLFNDDPETTHEQVLELLKSSIALVEGEIEQRSAQRTIECAA
Ga0209307_11883893	3300025832	Pelagic Marine	YVSDDPLYYRGDLQRGQIPEPFWFVRQALKARSTYNNVGLFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA
Ga0209119_12283083	3300025860	Pelagic Marine	SDDPLYYRGDLQRGQIPEPFWFVRQALKARSTYNNVGLFNDDPETTHEQVLELLKSSIALVEGEMEQRSAQRTNECAA
Ga0209308_100870593	3300025869	Pelagic Marine	MKQGQSYCINGALFEVGTPNYQMPEDYVSDDPLYYRGDLQRGQIPEPFWFVRQALKARSTYNNVGLFNDDPETTHEQVLELLKSSIALVEGEIEQRSAQRTNECAA
Ga0209309_102911871	3300025881	Pelagic Marine	DYTSDGPLYYRGDLQRGQIPEPFWFLRQALKARSTYNNVGLFNDDPETTHEQVLELLKSSIALVEGEIEQRSAQRTIECAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088259

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences