Metagenome / Metatranscriptome Family F088256

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088256
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	42 residues
Representative Sequence	GIFRGRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYNG
Number of Associated Samples	24
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.83 %
% of genes near scaffold ends (potentially truncated)	96.33 %
% of genes from short scaffolds (< 2000 bps)	88.99 %
Associated GOLD sequencing projects	24
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (74.312 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral (97.248 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal corpus (97.248 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00078	RVT_1	0.92
PF00001	7tm_1	0.92
PF00096	zf-C2H2	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
All Organisms	root	All Organisms	25.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
cellular organisms	root	All Organisms → cellular organisms	25.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	25.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	25.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	23.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	23.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Cnidaria	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria	23.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Anthozoa	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa	23.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Hexacorallia	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia	22.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Scleractinia	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	22.02 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Astrocoeniina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina	9.17 %
Faviina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina	7.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Pocilloporidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae	8.26 %
Merulinidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae	7.34 %
Acroporidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Orbicella	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella	7.34 %
Stylophora	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Stylophora	4.59 %
Pocillopora	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Pocillopora	3.67 %
Acropora	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.31 %
Orbicella faveolata	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	7.34 %
Stylophora pistillata	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Stylophora → Stylophora pistillata	4.59 %
Pocillopora damicornis	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Pocillopora → Pocillopora damicornis	3.67 %
Acropora millepora	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora → Acropora millepora	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003317\|BLZ4_1081474	Not Available	653	Open in IMG/M
3300003317\|BLZ4_1082252	Not Available	651	Open in IMG/M
3300008013\|Ga0099809_10230664	All Organisms → cellular organisms → Eukaryota → Opisthokonta	698	Open in IMG/M
3300008013\|Ga0099809_10234508	Not Available	2468	Open in IMG/M
3300008013\|Ga0099809_10236122	Not Available	732	Open in IMG/M
3300008014\|Ga0099814_1175640	Not Available	895	Open in IMG/M
3300008014\|Ga0099814_1184528	Not Available	702	Open in IMG/M
3300008014\|Ga0099814_1185241	Not Available	671	Open in IMG/M
3300008014\|Ga0099814_1260500	Not Available	828	Open in IMG/M
3300008029\|Ga0099812_1006858	Not Available	504	Open in IMG/M
3300008029\|Ga0099812_1082557	Not Available	760	Open in IMG/M
3300008029\|Ga0099812_1084568	Not Available	775	Open in IMG/M
3300008029\|Ga0099812_1129627	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Stylophora → Stylophora pistillata	1246	Open in IMG/M
3300008034\|Ga0099810_1036953	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	1504	Open in IMG/M
3300008035\|Ga0099808_1036624	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Stylophora → Stylophora pistillata	933	Open in IMG/M
3300008035\|Ga0099808_1288848	Not Available	2043	Open in IMG/M
3300008035\|Ga0099808_1682874	Not Available	502	Open in IMG/M
3300008037\|Ga0099803_1076828	Not Available	1161	Open in IMG/M
3300008037\|Ga0099803_1097450	Not Available	2084	Open in IMG/M
3300008038\|Ga0099805_1151941	All Organisms → cellular organisms → Eukaryota → Opisthokonta	695	Open in IMG/M
3300008038\|Ga0099805_1327495	Not Available	732	Open in IMG/M
3300008038\|Ga0099805_1613843	Not Available	818	Open in IMG/M
3300008039\|Ga0099802_1416762	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Pocillopora → Pocillopora damicornis	972	Open in IMG/M
3300008039\|Ga0099802_1426181	Not Available	545	Open in IMG/M
3300008039\|Ga0099802_1440574	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	2164	Open in IMG/M
3300008039\|Ga0099802_1463363	Not Available	683	Open in IMG/M
3300008040\|Ga0099801_1511771	Not Available	678	Open in IMG/M
3300008041\|Ga0099806_1101530	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	3715	Open in IMG/M
3300008041\|Ga0099806_1138536	Not Available	744	Open in IMG/M
3300008041\|Ga0099806_1587882	Not Available	722	Open in IMG/M
3300008043\|Ga0099807_1025273	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Stylophora → Stylophora pistillata	939	Open in IMG/M
3300008043\|Ga0099807_1179554	Not Available	707	Open in IMG/M
3300008043\|Ga0099807_1471313	Not Available	624	Open in IMG/M
3300008043\|Ga0099807_1581066	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Pocillopora → Pocillopora damicornis	1962	Open in IMG/M
3300008044\|Ga0099804_1025553	Not Available	911	Open in IMG/M
3300008044\|Ga0099804_1731535	Not Available	816	Open in IMG/M
3300008046\|Ga0099813_1038163	Not Available	695	Open in IMG/M
3300008046\|Ga0099813_1373168	Not Available	1072	Open in IMG/M
3300008047\|Ga0100404_1014659	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	545	Open in IMG/M
3300008047\|Ga0100404_1028890	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	3170	Open in IMG/M
3300008047\|Ga0100404_1196684	Not Available	1693	Open in IMG/M
3300010021\|Ga0133905_1026185	Not Available	835	Open in IMG/M
3300010030\|Ga0126338_10071721	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	1752	Open in IMG/M
3300010030\|Ga0126338_10097989	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	1347	Open in IMG/M
3300010030\|Ga0126338_10098347	Not Available	1342	Open in IMG/M
3300010030\|Ga0126338_10116962	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	1160	Open in IMG/M
3300010030\|Ga0126338_10122284	Not Available	1118	Open in IMG/M
3300010030\|Ga0126338_10128928	Not Available	1070	Open in IMG/M
3300010030\|Ga0126338_10144246	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	976	Open in IMG/M
3300010030\|Ga0126338_10144305	Not Available	976	Open in IMG/M
3300010030\|Ga0126338_10254173	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Pocillopora → Pocillopora damicornis	632	Open in IMG/M
3300010030\|Ga0126338_10278116	Not Available	593	Open in IMG/M
3300010031\|Ga0126337_10056158	Not Available	2676	Open in IMG/M
3300010031\|Ga0126337_10061680	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Stylophora → Stylophora pistillata	2556	Open in IMG/M
3300010031\|Ga0126337_10140103	Not Available	1659	Open in IMG/M
3300010031\|Ga0126337_10161656	Not Available	1526	Open in IMG/M
3300010031\|Ga0126337_10185412	Not Available	1402	Open in IMG/M
3300010031\|Ga0126337_10261487	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa	1111	Open in IMG/M
3300010031\|Ga0126337_10418990	Not Available	757	Open in IMG/M
3300010033\|Ga0126339_10118982	Not Available	1282	Open in IMG/M
3300010033\|Ga0126339_10448016	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Pocillopora → Pocillopora damicornis	634	Open in IMG/M
3300010034\|Ga0126342_10214531	Not Available	1026	Open in IMG/M
3300010034\|Ga0126342_10256437	Not Available	876	Open in IMG/M
3300010034\|Ga0126342_10418867	Not Available	568	Open in IMG/M
3300010034\|Ga0126342_10438776	Not Available	546	Open in IMG/M
3300010035\|Ga0126343_10023386	Not Available	4187	Open in IMG/M
3300010035\|Ga0126343_10039302	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	3312	Open in IMG/M
3300010035\|Ga0126343_10074886	Not Available	2406	Open in IMG/M
3300010035\|Ga0126343_10077926	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora → Acropora millepora	2356	Open in IMG/M
3300010035\|Ga0126343_10120658	Not Available	1866	Open in IMG/M
3300010035\|Ga0126343_10128172	Not Available	1803	Open in IMG/M
3300010035\|Ga0126343_10148584	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	1663	Open in IMG/M
3300010035\|Ga0126343_10164318	Not Available	1574	Open in IMG/M
3300010035\|Ga0126343_10212127	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	1364	Open in IMG/M
3300010035\|Ga0126343_10220400	Not Available	1334	Open in IMG/M
3300010035\|Ga0126343_10222735	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia	1327	Open in IMG/M
3300010035\|Ga0126343_10254755	Not Available	1227	Open in IMG/M
3300010035\|Ga0126343_10325833	Not Available	1061	Open in IMG/M
3300010035\|Ga0126343_10364145	Not Available	991	Open in IMG/M
3300010035\|Ga0126343_10380254	Not Available	965	Open in IMG/M
3300010035\|Ga0126343_10423655	Not Available	902	Open in IMG/M
3300010035\|Ga0126343_10433402	Not Available	889	Open in IMG/M
3300010035\|Ga0126343_10527552	Not Available	783	Open in IMG/M
3300010035\|Ga0126343_10543109	Not Available	769	Open in IMG/M
3300010035\|Ga0126343_10548748	Not Available	763	Open in IMG/M
3300010035\|Ga0126343_10556695	Not Available	756	Open in IMG/M
3300010035\|Ga0126343_10572860	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata	742	Open in IMG/M
3300010035\|Ga0126343_10593135	Not Available	725	Open in IMG/M
3300010035\|Ga0126343_10615757	Not Available	707	Open in IMG/M
3300010035\|Ga0126343_10641887	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Pocilloporidae → Stylophora → Stylophora pistillata	687	Open in IMG/M
3300010035\|Ga0126343_10647996	Not Available	683	Open in IMG/M
3300010035\|Ga0126343_10655006	Not Available	678	Open in IMG/M
3300010035\|Ga0126343_10664431	Not Available	671	Open in IMG/M
3300010035\|Ga0126343_10716896	Not Available	637	Open in IMG/M
3300010035\|Ga0126343_10753824	Not Available	615	Open in IMG/M
3300010035\|Ga0126343_10800191	Not Available	591	Open in IMG/M
3300010035\|Ga0126343_10821170	Not Available	580	Open in IMG/M
3300010035\|Ga0126343_10868559	Not Available	558	Open in IMG/M
3300010035\|Ga0126343_11009099	Not Available	501	Open in IMG/M
3300010394\|Ga0126341_1024108	Not Available	1115	Open in IMG/M
3300010394\|Ga0126341_1036492	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia	983	Open in IMG/M
3300010394\|Ga0126341_1047799	Not Available	904	Open in IMG/M
3300010394\|Ga0126341_1111250	Not Available	681	Open in IMG/M
3300010394\|Ga0126341_1115395	Not Available	672	Open in IMG/M
3300010394\|Ga0126341_1132499	Not Available	638	Open in IMG/M
3300010394\|Ga0126341_1171656	Not Available	577	Open in IMG/M
3300010394\|Ga0126341_1180595	Not Available	565	Open in IMG/M
3300022595\|Ga0215184_1074555	Not Available	587	Open in IMG/M
3300022600\|Ga0215182_1082945	Not Available	767	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Invertebrates	Host-Associated → Invertebrates	99.08%
Human	Host-Associated → Human	0.92%

Habitat	Taxonomy	Distribution
Cnidaria	Host-Associated → Invertebrates → Cnidaria	99.08%
Digestive System	Host-Associated → Human → Digestive System	0.92%

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral	97.25%
Unclassified	Host-Associated → Invertebrates → Cnidaria → Unclassified	1.83%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified	97.25%
Unclassified	Host-Associated → Invertebrates → Cnidaria → Unclassified → Unclassified	1.83%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.92%

Habitat	Taxonomy	Distribution
Coral	Host-Associated → Invertebrates → Cnidaria → Coral → Unclassified → Coral	97.25%
Cnidaria	Host-Associated → Invertebrates → Cnidaria → Unclassified → Unclassified → Cnidaria	1.83%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003317	Belize BBD 4	Host-Associated	Open in IMG/M
3300008013	Coral microbial communities from Puerto Morelos, Mexico - Orbicella T R C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008014	Coral microbial communities from Puerto Morelos, Mexico - Diporia T B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008029	Coral microbial communities from Puerto Morelos, Mexico - Diploria C C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008034	Coral microbial communities from Puerto Morelos, Mexico - Diploria C A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008035	Coral microbial communities from Puerto Morelos, Mexico - Orbicella T R B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008037	Coral microbial communities from Puerto Morelos, Mexico - Orbicella 8 T C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008038	Coral microbial communities from Puerto Morelos, Mexico - Orbicella C B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008039	Coral microbial communities from Puerto Morelos, Mexico - Orbicella 8 T B metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008040	Coral microbial communities from Puerto Morelos, Mexico - Orbicella 8 T A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008041	Coral microbial communities from Puerto Morelos, Mexico - Orbicella C C metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008043	Coral microbial communities from Puerto Morelos, Mexico - Orbicella T R A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008044	Coral microbial communities from Puerto Morelos, Mexico - Orbicella C A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008046	Coral microbial communities from Puerto Morelos, Mexico - Diporia T A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300008047	Coral microbial communities from Puerto Morelos, Mexico - Orbicella 8 C A metatranscriptome (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300010021	Microbial communities of stony corals with Black-band disease (BBD) from Carrie Bow Cay Field Station, Belize; BBD Transitions coral #3 sample T3	Host-Associated	Open in IMG/M
3300010030	Coral microbial communities from Petempiche,Puerto Morelos, Mexico - Orbicella C C metagenome	Host-Associated	Open in IMG/M
3300010031	Coral microbial communities from La Bocana,Puerto Morelos, Mexico - Diploria C A metagenome	Host-Associated	Open in IMG/M
3300010033	Coral microbial communities from Petempiche,Puerto Morelos, Mexico - Orbicella T R C metagenome	Host-Associated	Open in IMG/M
3300010034	Coral microbial communities from Lord Howe Island, Old Settlement Bay, Australia - Cyphastrea 1 metagenome	Host-Associated	Open in IMG/M
3300010035	Coral microbial communities from Lord Howe Island, Old Settlement Bay, Australia - Cyphastrea 2 metagenome	Host-Associated	Open in IMG/M
3300010394	Coral microbial communities from Florida Keys, Florida, USA - Orbicella T D metagenome	Host-Associated	Open in IMG/M
3300022595	Metatranscriptome of coral microbial communities from Popa Island, Bocas del Toro, Panama - APAL T2 (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M
3300022600	Metatranscriptome of coral microbial communities from Popa Island, Bocas del Toro, Panama - APAL C3 (Eukaryote Community Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BLZ4_10814741	3300003317	Cnidaria	TIHPGIFLGRALWADSVSPRMNTIASCDQFKPIRIGGNLVVNYNG*
BLZ4_10822521	3300003317	Cnidaria	IHSGNFLGRALWADSVSSWMSTIASRDQFKPIRIGENLVVNYHA*
Ga0099809_102306641	3300008013	Coral	IFLGRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYKVY*
Ga0099809_102345083	3300008013	Coral	IFLRQALWADSVSPPMNIIESCDQFKLIRIGENLVVDYKS*
Ga0099809_102361221	3300008013	Coral	IFLGRALWADSVSPRMNTIATCDQFKPIRVGENLVVNYKMGQGF*
Ga0099814_11756401	3300008014	Coral	GIFGGRTLCADSVSPRMNTIASRDQFKPIRIGENLVVNYNV*
Ga0099814_11845282	3300008014	Coral	GIFGGRTLCADSVSPRMNTIASRDQSKPIRIGENLVVNYNVV*
Ga0099814_11852411	3300008014	Coral	GIFGGRTLCADSVSPRMNTIASRDQSKPIRIGENLVVNYKG*
Ga0099814_12605001	3300008014	Coral	TSTIHPGIFGGRTLCADSVSPRMNTIASRDQSKPIRIGENLVVNYKC*
Ga0099812_10068582	3300008029	Coral	GGRTLYADSVSPRMNTIASRDQSEPIRIGENLVVNYNEL*
Ga0099812_10825571	3300008029	Coral	TSTIHPGIFGGRTLCADSVSPRMNTIASRDQFKPIRIGEN*
Ga0099812_10845681	3300008029	Coral	GIFGGRTLCADSVSPRMNTIASRDQFKPIRIGENLVVNYNYS*
Ga0099812_11296271	3300008029	Coral	MHPGIFGGRTLCADSVSPRMNTIASRDQFKPIRIGENLVVN
Ga0099810_10369531	3300008034	Coral	HPGIFGGRALCADSVSLRMNTIKPRDQLKPITIGENLVLSYN*
Ga0099808_10366241	3300008035	Coral	GIFLGRALWADSVSPRTNTIASRDQFKPIRIGENVVVNYNL*
Ga0099808_12888482	3300008035	Coral	MSTIHPGIFLGRALWADSVSPRTNTNASHDQFKPIRIGENLVVNYNL*
Ga0099808_16828741	3300008035	Coral	RRALWADSVSLRMNTIASRDQFQPIRIRENLVVNYNG*
Ga0099803_10768281	3300008037	Coral	ALWADSVSLRMNTFASRDQFKPVRIGENLVANYNG*
Ga0099803_10974501	3300008037	Coral	GIFLGLALWADSVSPRMNTIASRDQFKPIRVGENLVVNYKES*
Ga0099805_11519411	3300008038	Coral	LGRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYKVY*
Ga0099805_13274951	3300008038	Coral	IFLGRALWADSVSPRMNTIATCDQFKPIRIGENLVVNYKMGQGF*
Ga0099805_16138432	3300008038	Coral	LGRALWADSVSLRMSTVASRDRFKPIRIGENLVMNYNG*
Ga0099802_14167621	3300008039	Coral	MSTIYLGIFLGLALWADSVSQWMNTIESHDQFKPTRIGENLVVNYN
Ga0099802_14261812	3300008039	Coral	GRALWADSVSPRMNTIASRDPFKPIRIGENLVVNYNV*
Ga0099802_14405741	3300008039	Coral	RTSTIHPGIFRGRALWADSVSPRTNTIASRDRFKAIAIGENLVVNYNRA*
Ga0099802_14633631	3300008039	Coral	TIHPGIFRGRALWADSVSPRTNTIAPRDQFKPVRLAENLVVSYKG*
Ga0099801_15117711	3300008040	Coral	LGRALWADSVSPRMNTIASRDQFEPIKIGENLVVNYNL*
Ga0099806_11015302	3300008041	Coral	LFTEKHSLMSTIYLGIFLGLALWADSVSQWMNTIESHDQFKPTRIGENLVVNYNKQ*
Ga0099806_11385361	3300008041	Coral	GRALWADSVSPRTNTIASRDRFKAIAIGENLVVNYNRS*
Ga0099806_15878821	3300008041	Coral	RALWADSVSLRMNTIALRDQFKPIRIGENLVMKYNA*
Ga0099807_10252732	3300008043	Coral	TSTIHPGIFLGRALWADSVSPRTNTIASRDRFKPIAIGENLVVNYNAC*
Ga0099807_11795541	3300008043	Coral	PGIFLGRALWADSVSPRTNTIASRDQFKPIRIGENLVVNYNSC*
Ga0099807_14713131	3300008043	Coral	VIHPGIFLGRALWADSVSPPINTIASRDQFNPIRIGENLVVN*
Ga0099807_15810661	3300008043	Coral	MSTIYLGIFLGPALWADSVSQRMNTIESHDQFKPTRIGENLVVNYNKQ*
Ga0099804_10255531	3300008044	Coral	GIFLGRTLWADSVSLRMNTIASRDQFKPKRIGENLVVNYNG*
Ga0099804_17315351	3300008044	Coral	IFLGRALWADSVSLRMSTVASRDRFKPIRIGENLVMNYNG*
Ga0099813_10381631	3300008046	Coral	GIFGGRTLCADSVSPRMNTIASRDQSKPIRIGENLVVNYKR*
Ga0099813_13731681	3300008046	Coral	TIHPGIFGERTLCADSVSPRMNTIASHDQSKPIRIGENLVVN*
Ga0100404_10146592	3300008047	Coral	FTEKFSQISTIHLGIFLGWALCADGVSPLMNTIVSRDQFKPTRIGENLVENLVNYN*
Ga0100404_10288902	3300008047	Coral	MSTIHPGIFFGRHYGLSVSLQMNAIVSHDQFKPIRIGENLVVNYNL*
Ga0100404_11966841	3300008047	Coral	FLRQALWADSVSPPMNIIESCDQFKLIRIGENLVVDYKS*
Ga0133905_10261851	3300010021	Host-Associated	NFGNFGRMESAHSVSPRMNTIASRDQFKPIRIGENLVVNYNL*
Ga0126338_100717212	3300010030	Coral	PGIFLGRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYKDA*
Ga0126338_100979891	3300010030	Coral	GIFLGRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYKR*
Ga0126338_100983471	3300010030	Coral	PGIFLGRALWADSVSPRTNTIASRDQFKPIRIGENLVVNYNCD*
Ga0126338_101169622	3300010030	Coral	PGIFLGRVLWADSVSPRMNTIASRDQFKPIRIGENLVVNYNL*
Ga0126338_101222841	3300010030	Coral	PGIFLGRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYNG*
Ga0126338_101289281	3300010030	Coral	PGIFLGRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYNL*
Ga0126338_101442461	3300010030	Coral	ASTIHPGIFLGRVLWADSVSPRMNTIASRDQFKPIRIGENFVVNYNV*
Ga0126338_101443052	3300010030	Coral	PGIFLGRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYN*
Ga0126338_102541731	3300010030	Coral	PGIFLGRALWADSVSPRMNTIASRDQFKPIRIGENLVVN*
Ga0126338_102781161	3300010030	Coral	GIFLGRALWADSVSPRMNTIASRDQFKPIRIGENFSGEL*
Ga0126337_100561581	3300010031	Coral	GIFGGRTLCADSVSPRMNTIASRDQFKPIRIGENLVVNYNEF*
Ga0126337_100616805	3300010031	Coral	PGIFGGRALCADSVSPRMNTIASRDQFKPIRIGENLVANYNHL*
Ga0126337_101401033	3300010031	Coral	PGIFGGRTLCADSVSPRMNTIASRDQSKPIRIGENLVVNYNV*
Ga0126337_101616561	3300010031	Coral	PGIFGGRTLCADSVSLRMNTIASRDQSKPIRIGENLVVNYNVN*
Ga0126337_101854121	3300010031	Coral	PGIFGGRALCADSVSPRMNTIASRDQFKPIRIGENLVANYN*
Ga0126337_102614871	3300010031	Coral	GIFGGRTLCADSVSPRMNTIASRDQFKPIRIGENLVVNYNDR*
Ga0126337_104189901	3300010031	Coral	PGIFGGRTLCADSVSPRMNTIASRDQFKPIRIGENLVVNYK*
Ga0126339_101189821	3300010033	Coral	ALWADSVSPRMNTIVSRDQFKPIRIGENLVVNYNL*
Ga0126339_104480161	3300010033	Coral	HPGIFLGRALWADSVSPRMNTIASRDQFKPIRIGENLVVN*
Ga0126342_102145312	3300010034	Coral	WADSVSPRMNTIASRDQFKPIRIGENFVVNYKD**
Ga0126342_102564371	3300010034	Coral	TTIHPGIFRGRALCADSVSPRMNTIASRDQFKPIRIGENLVVNYNG*
Ga0126342_104188671	3300010034	Coral	RGRALWADSVSPRMNTIASRDQLKPIRIGENLVVNYKG*
Ga0126342_104387761	3300010034	Coral	WADSVSPRMNTIASRDQFKPMTIGENLVVNYNGC*
Ga0126343_100233865	3300010035	Coral	GIFRGRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYNG*
Ga0126343_100393023	3300010035	Coral	GIFRGRALWADSVSPRTNTIASRDQFKPIRIGENLEANYNEV*
Ga0126343_100748861	3300010035	Coral	GIFRGRALWADSVSPRTNTIASRDQFKPIRIGENLVANYKKR*
Ga0126343_100779265	3300010035	Coral	PGIFRGRALWADSVSPRTNTIASRDQFKPIRIGENLVANYNYL*
Ga0126343_101206582	3300010035	Coral	PGIFRGRALWADSVSPRTNTIASRDQFKPIGIGENLVANYNG*
Ga0126343_101281721	3300010035	Coral	TTIHPGIFRGRALWTDSVAPRTNTIASRDQFKPIRIGENLVANYNAR*
Ga0126343_101485844	3300010035	Coral	TTTIHPGIFRGRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYNDR*
Ga0126343_101643182	3300010035	Coral	PGIFRGRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYKS*
Ga0126343_102121271	3300010035	Coral	PGIFRGRALWADSVPPRTNTIASRDQFKPIRIGENLVANYNGS*
Ga0126343_102204001	3300010035	Coral	RGRALWADSVAPRTNTIASRDQFKPIRIGENLVANYKG*
Ga0126343_102227352	3300010035	Coral	PGIFRGRALWADSVSPRTNTIASRDQFKPIGIGENLVANYNL*
Ga0126343_102547552	3300010035	Coral	PGIFRGRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYNFCD*
Ga0126343_103258331	3300010035	Coral	PGIFRGRALWADSVSPRTKTIASRDQFKPIRIGENLVANYNG*
Ga0126343_103641451	3300010035	Coral	TIHPGIFRGRALWADSVSPRTNTIASRDQFKPIRIGENLVVNYNG*
Ga0126343_103802541	3300010035	Coral	PGIFRGRALWADSVSQRTNTIASRDQFKPIRIGENLVANYNG*
Ga0126343_104236551	3300010035	Coral	PGIFRGRALWADSVSPRMNTIAPRDQFKPIRIGENLVVNYNA*
Ga0126343_104334021	3300010035	Coral	PGIFRGRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYKR*
Ga0126343_105275522	3300010035	Coral	GIFRGRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYNGR*
Ga0126343_105431091	3300010035	Coral	GIFRGRALWADSVSPRTNTIASRDQFKPIRIGENLVVNYNAR*
Ga0126343_105487481	3300010035	Coral	GIFRGRALWADSVSPRTNTIASRDQFKPIGIGENLVANYKD*
Ga0126343_105566951	3300010035	Coral	GIFLGRALWADSVSPRMNTIASRDQFKPIRIGENLVVN*
Ga0126343_105728601	3300010035	Coral	GVFHGRALWADRVSPRMNTIASRNQLKPIRIGENLVVNYN*
Ga0126343_105931351	3300010035	Coral	GIFRGRALWADSVSPRTNTIASRDQFKPIRIGENLVVNYNV*
Ga0126343_106157571	3300010035	Coral	PGIFRGRALWADSVAPRTNTIASRDQFKPIRIGENLVANYNSP*
Ga0126343_106418871	3300010035	Coral	LWADSVAPRTNTIASRDQFKPIRIGENLVANYNG*
Ga0126343_106479961	3300010035	Coral	PGTFRGRALWADSVSPRTNTIASRDQFKPIRIGENLVANYND*
Ga0126343_106550062	3300010035	Coral	GIFRGRALWADSVSPRTNTIASRDQFKPMRIGENLVANYNDG*
Ga0126343_106644311	3300010035	Coral	PGIFRGRALWADSASPRTNTIASRDQFKPIRIGENLVANYKS*
Ga0126343_107168961	3300010035	Coral	GIFRGRALWADSVAPRTNTIASRDQFKPIRIGENLVANYNDR*
Ga0126343_107538241	3300010035	Coral	RGRALWADSVSPRMNTIASRDRFKPIRIGENLVVDYNNQ*
Ga0126343_108001911	3300010035	Coral	GIFRGRALWADSVSPRMNTIASHDQFKPIRIGENLVVNYN*
Ga0126343_108211701	3300010035	Coral	GRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYNA*
Ga0126343_108685591	3300010035	Coral	FRGWALWADSVSPRMNTIASRDQFKPIKIGENLVANYKG*
Ga0126343_110090991	3300010035	Coral	GIFRGRALWADSVSPRTNTIASRDQFKPIRIGENLVANYKG*
Ga0126341_10241081	3300010394	Coral	IFLRQALWADSASPPMNTIASREQFKPIRIGENLVVDYNSP*
Ga0126341_10364921	3300010394	Coral	PGIFLGRALWADSVSPRMNTIASRDQFKPIRIGENLVVNYKG*
Ga0126341_10477991	3300010394	Coral	GIFLRRALWADSVSPRMNTIASRDQFKPTKIGENLVVNYNL*
Ga0126341_11112501	3300010394	Coral	PGIFLGRALWADSVSPRTNTIASRDQFKPIRIGENLVVNYK*
Ga0126341_11153951	3300010394	Coral	MSTIHPGIFLRRALWADSVSPRTNTIASRDQFKPIRIGENLVVNY
Ga0126341_11324991	3300010394	Coral	RVFFLGRALWADSVSPLMNTIASRDQLKPIRIGENLVVNYNG*
Ga0126341_11716561	3300010394	Coral	IYLGQALWADSVCLQMNTNVSRDQFKPMRIGEDLVVNYHG*
Ga0126341_11805951	3300010394	Coral	LWADSVSPWTNTIASHDQFKPIKIGENLVVNYNL*
Ga0215184_10745551	3300022595	Coral	RALWADSVSLQMNTTASRDQFNPIRIGENLVVNYKDY
Ga0215182_10829451	3300022600	Coral	RALWADSVSLQMNTTASRDQFIPIRIGENLVVNYKDY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088256

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences