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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F088165 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 109 |
| Average Sequence Length | 60 residues |
| Representative Sequence | VNVRVDEVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR |
| Number of Associated Samples | 77 |
| Number of Associated Scaffolds | 109 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 44.95 % |
| % of genes near scaffold ends (potentially truncated) | 44.04 % |
| % of genes from short scaffolds (< 2000 bps) | 94.50 % |
| Associated GOLD sequencing projects | 75 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.72 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (82.569 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.266 % of family members) |
| Environment Ontology (ENVO) | Unclassified (28.440 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (57.798 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 16.09% β-sheet: 22.99% Coil/Unstructured: 60.92% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.72 |
| Powered by PDBe Molstar | |
| SCOP family | SCOP domain | Representative PDB | TM-score |
|---|---|---|---|
| d.54.1.0: automated matches | d4h2ha1 | 4h2h | 0.64272 |
| d.54.1.0: automated matches | d3toya1 | 3toy | 0.63807 |
| b.55.1.5: Third domain of FERM | d2al6a2 | 2al6 | 0.62963 |
| b.55.1.1: Pleckstrin-homology domain (PH domain) | d6tt2a_ | 6tt2 | 0.62947 |
| b.55.1.1: Pleckstrin-homology domain (PH domain) | d1faoa_ | 1fao | 0.62567 |
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| Pfam ID | Name | % Frequency in 109 Family Scaffolds |
|---|---|---|
| PF00534 | Glycos_transf_1 | 4.59 |
| PF00106 | adh_short | 0.92 |
| PF05532 | CsbD | 0.92 |
| PF04366 | Ysc84 | 0.92 |
| PF07005 | SBD_N | 0.92 |
| PF05239 | PRC | 0.92 |
| PF01068 | DNA_ligase_A_M | 0.92 |
| PF02586 | SRAP | 0.92 |
| PF16242 | Pyrid_ox_like | 0.92 |
| PF09954 | DUF2188 | 0.92 |
| PF02518 | HATPase_c | 0.92 |
| COG ID | Name | Functional Category | % Frequency in 109 Family Scaffolds |
|---|---|---|---|
| COG1423 | ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family | Replication, recombination and repair [L] | 0.92 |
| COG1793 | ATP-dependent DNA ligase | Replication, recombination and repair [L] | 0.92 |
| COG2135 | ssDNA abasic site-binding protein YedK/HMCES, SRAP family | Replication, recombination and repair [L] | 0.92 |
| COG2930 | Lipid-binding SYLF domain, Ysc84/FYVE family | Lipid transport and metabolism [I] | 0.92 |
| COG3237 | Uncharacterized conserved protein YjbJ, UPF0337 family | Function unknown [S] | 0.92 |
| COG3395 | D-threonate/D-erythronate kinase OtnK and related C4-acid sugar kinases, YgbK/DUF1537 family | Carbohydrate transport and metabolism [G] | 0.92 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 82.57 % |
| All Organisms | root | All Organisms | 17.43 % |
| Visualization |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 19.27% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 11.01% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 9.17% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 4.59% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 3.67% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 3.67% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.67% |
| Soil | Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil | 3.67% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 3.67% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 2.75% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.75% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 2.75% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.75% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 2.75% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 1.83% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.83% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.83% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.83% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.83% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.83% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.92% |
| Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 0.92% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 0.92% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.92% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.92% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.92% |
| Populus Endosphere | Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere | 0.92% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.92% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.92% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.92% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 0.92% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.92% |
| Visualization |
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| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2199352025 | Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL | Environmental | Open in IMG/M |
| 3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
| 3300001990 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 | Host-Associated | Open in IMG/M |
| 3300002568 | Grasslands soil microbial communities from Hopland, California, USA - 2 | Environmental | Open in IMG/M |
| 3300004153 | Grasslands soil microbial communities from Hopland, California, USA (version 2) | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
| 3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
| 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
| 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Environmental | Open in IMG/M |
| 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Environmental | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
| 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
| 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Host-Associated | Open in IMG/M |
| 3300006048 | Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Host-Associated | Open in IMG/M |
| 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Host-Associated | Open in IMG/M |
| 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Host-Associated | Open in IMG/M |
| 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010044 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60 | Environmental | Open in IMG/M |
| 3300010147 | Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010154 | Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
| 3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
| 3300010999 | Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015 | Environmental | Open in IMG/M |
| 3300011000 | Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015 | Environmental | Open in IMG/M |
| 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300012939 | Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015 | Environmental | Open in IMG/M |
| 3300012941 | Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015 | Environmental | Open in IMG/M |
| 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
| 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
| 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300018000 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex | Environmental | Open in IMG/M |
| 3300018027 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex | Environmental | Open in IMG/M |
| 3300018073 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1 | Environmental | Open in IMG/M |
| 3300018077 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1 | Environmental | Open in IMG/M |
| 3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
| 3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
| 3300019269 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019356 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2) | Environmental | Open in IMG/M |
| 3300021082 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo | Environmental | Open in IMG/M |
| 3300021951 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300022756 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1 | Environmental | Open in IMG/M |
| 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
| 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028589 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1 | Environmental | Open in IMG/M |
| 3300028710 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380 | Environmental | Open in IMG/M |
| 3300028712 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139 | Environmental | Open in IMG/M |
| 3300028754 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157 | Environmental | Open in IMG/M |
| 3300028755 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356 | Environmental | Open in IMG/M |
| 3300028778 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142 | Environmental | Open in IMG/M |
| 3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
| 3300028819 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153 | Environmental | Open in IMG/M |
| 3300028824 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197 | Environmental | Open in IMG/M |
| 3300028880 | Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181 | Environmental | Open in IMG/M |
| 3300030905 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031058 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031091 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031093 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| deepsgr_02474070 | 2199352025 | Soil | MVPDGFGFHLQASEYTWVTLVFDTKDEAKAAHSHAAKAVANAKALKIVNR |
| JGI10216J12902_1010379485 | 3300000956 | Soil | SILPLLSMMLPAEVDVTVQVDEVQSVPDGFGFHLKASEYTWITLVFDNKAEAEAAHSHAEKAVAKAKALKVVNR* |
| JGI10216J12902_1155692372 | 3300000956 | Soil | VTVQVDEVQMVPDGFGFHLKASEYTWVTLVFETKDEAQAAHGHAAKAVARAKALKIVNR* |
| JGI24737J22298_100703251 | 3300001990 | Corn Rhizosphere | VNVRVDEVQMVPDGFGFHLQASEYTWVTLVXETKAEAEAAHSHAAKAVAKAKALKIVNR* |
| C688J35102_1203621331 | 3300002568 | Soil | MNVQVDEVQMVPDGFGFHLRASEYTWVTLVFDTKDEAKAAHSHAAKAVANAKALKIVNR* |
| Ga0063455_1003935631 | 3300004153 | Soil | MSVQVDEVQSVPDGFGFHLKASEYTWITLVFETKGEAEAAHSHAAKAVAHAKALKIVNR* |
| Ga0063455_1017018482 | 3300004153 | Soil | MNVQVDEVQMVPDGFGFHLRASEYTWVTLVFDTKDEATAAHSHAAKAVANAKALKIVNR* |
| Ga0063356_1049155491 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MMLPAEVDVTVQVDEVQSVPDGFGFHLKASEYTWITLVFDNKAEAEAAHSHAEKAVAKAKALKVVNR* |
| Ga0062595_1003847832 | 3300004479 | Soil | VNVRVDDVQMVPDGFGFHLQASEYTWVTLVFDTKDEAKAAHSHAAKAVANAKALKIVNR* |
| Ga0062595_1004255481 | 3300004479 | Soil | VNVQVDEVQMVPDGFGFHLQAGEYTWVTLVFETKHEAEAAHSHAAKAVAHAKALKIVNR* |
| Ga0062595_1009546032 | 3300004479 | Soil | VNVRVDEVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR* |
| Ga0062592_1016664011 | 3300004480 | Soil | GVFLRRCGVNVQVDEVQMVPDGFGFHLQAGEYTWVTLVFETKHEAEAAHSHAAKAVAHAKALKIVNR* |
| Ga0068869_1011104051 | 3300005334 | Miscanthus Rhizosphere | RRNSSVLSTLHFIGAYQRRRNVSIQVDEVQSVPDGFGFHLKASEYTWVTLVFETKEEAEAAHSHAAKAVAHAKALKIVNR* |
| Ga0070689_1008431052 | 3300005340 | Switchgrass Rhizosphere | MNVQVDEVQMVPDGFGFHLRASEYTWVTLVFESKDEAEAAHGHAAKAVAKAKALKIVNR* |
| Ga0070661_1000507343 | 3300005344 | Corn Rhizosphere | VPSILRLSVLLFFERRLEVNVRVDEVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR* |
| Ga0070701_100510181 | 3300005438 | Corn, Switchgrass And Miscanthus Rhizosphere | VRVDEVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR* |
| Ga0070711_1004229852 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | VPSILRLSVLLFFERRLEGDVRVDVVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR* |
| Ga0070694_1017485211 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | TSFIGVVVFRRRLEVNVRVDEVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR* |
| Ga0070702_1013972961 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | MMLPTEVDVTVQIDEVQSVPDGFGFHLKASEYTWITLVFDTKAEAEAAHSHAEKAVAKAKALKVVNR* |
| Ga0068870_100991944 | 3300005840 | Miscanthus Rhizosphere | ERRLEVNVRVDEVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR* |
| Ga0075363_1009606771 | 3300006048 | Populus Endosphere | VTVQVDEVQMVPDGFGFHLKASEYTWVTLVFETKDEAQAAHSQAAKAVAKAKALKIVNR* |
| Ga0105244_104166651 | 3300009036 | Miscanthus Rhizosphere | MVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR* |
| Ga0105250_103437371 | 3300009092 | Switchgrass Rhizosphere | LFFERRLEVNVRVDEVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR* |
| Ga0105248_101287073 | 3300009177 | Switchgrass Rhizosphere | LFFERRLEVNVRVDEVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKSLKIVNR* |
| Ga0105249_118391051 | 3300009553 | Switchgrass Rhizosphere | DGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR* |
| Ga0126310_108627262 | 3300010044 | Serpentine Soil | VTVQVDEVQMVPDGFGFHLKASEYTWVTLVFETKDEAEAAHGHAAKAVTRAKALKIVNR* |
| Ga0126319_12937772 | 3300010147 | Soil | VLRRRREVNVRVDDVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR* |
| Ga0127503_104782721 | 3300010154 | Soil | PNVNVQVDEVQMVPDGFGFHLQASEYTWVTLVFETKHEAEAAHSHAAKAVAHAKALKIVNR* |
| Ga0134125_115238432 | 3300010371 | Terrestrial Soil | VTVQVDEVQMVPDGFGFHLKSSEYTWVTLVFETKDEAKAAHSHAAKAVAQAKAVKIVNR* |
| Ga0134121_126496721 | 3300010401 | Terrestrial Soil | PDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR* |
| Ga0134123_126368452 | 3300010403 | Terrestrial Soil | MVPDGFGFHLQASEYTWVTLVFDTKDEAKAAHSHAEKAVANAKALKIVNR* |
| Ga0138505_1000552442 | 3300010999 | Soil | DTSVTTSLMLPAEVNVTVQVDEVQSVPDGFGFHLKASEYTWITLVFETKDEAEAAHSHAEKAVAKAKTIKIVNR* |
| Ga0138513_1000056262 | 3300011000 | Soil | VNVRVDDVPVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR* |
| Ga0105246_107766062 | 3300011119 | Miscanthus Rhizosphere | MVPDGFGFHLQASEYTWVTLVFDTKDEAKAAHSHAAKAVANAKALKIVNR* |
| Ga0150985_1009226211 | 3300012212 | Avena Fatua Rhizosphere | MNVQVDEVQMVPDGFGFHLRASEYTWVTLVFESKDEAEAAHSHAGKAVAHAKALKIVNR* |
| Ga0150985_1030793584 | 3300012212 | Avena Fatua Rhizosphere | PDGFGFHLRASEYTWVTLVFDTKDEAKAAHGHAAKAVEKAKALKIVNR* |
| Ga0150985_1083381132 | 3300012212 | Avena Fatua Rhizosphere | VSIQVDEVQSVPDGFGFHLIASEYTWITLVFETKEEAEAAHSHAAKAVAHAKALKIVNR* |
| Ga0150985_1133383881 | 3300012212 | Avena Fatua Rhizosphere | MTVQVDSVQMVPDGFGFHIKASEYTWITVVFETKREAEAAHSHAEKAVAHAKAVKIVKK* |
| Ga0150985_1139714732 | 3300012212 | Avena Fatua Rhizosphere | VQSVPDGFGFHLKASEYTWITLVFETKDEAEAAHSHAAKAVAQAKALKIVNR* |
| Ga0150985_1166866283 | 3300012212 | Avena Fatua Rhizosphere | VKIQVDEVQMVPDGFGFHIKASEYTWITLVFEKKAEAEAAHGHAEKAVANATAVKIVNR* |
| Ga0150985_1173446732 | 3300012212 | Avena Fatua Rhizosphere | VTVQVDEVQMVPDGFGFHVKASEYTWVTLVFETKDEAQAAHSHAAKAVAKAKAVKIVNR* |
| Ga0150985_1207452141 | 3300012212 | Avena Fatua Rhizosphere | DMNVQVDEVQMVPDGFGFHLRASEYTWVTLVFETKAEAEAAHSHAANAVADAANPTVPERRPTI* |
| Ga0150985_1212929982 | 3300012212 | Avena Fatua Rhizosphere | MTVQVDDVQSVPDGFGFHLKASEYTWVTVVFETKDEAEAAHKHASKAVAGAKALKIVNR* |
| Ga0150985_1216514221 | 3300012212 | Avena Fatua Rhizosphere | AVQVDEVQSVPDGFGFHLKASEYTWITLVFETKGEAEAAHSHAAKAVAQAKTLKIVNR* |
| Ga0150985_1226420301 | 3300012212 | Avena Fatua Rhizosphere | FPRRCNVTVQVDEVQMVPDGFGFHLKASEYTWVTLVFETKDEAEKAHSHAAKVVARAKALKIVNR* |
| Ga0150985_1229086623 | 3300012212 | Avena Fatua Rhizosphere | LACVINGFPVEVAVTVQVDEVQSVPDGFGFHLKASEYTWITVVFETKDEAEAAHKHAAKAVDGAKALKIVNR* |
| Ga0150984_1012127585 | 3300012469 | Avena Fatua Rhizosphere | VTVQVDEVQMVPDGFGFHLKASEYTWVTLVFETKDEAEKAHSHAAKVVARAKALKIVNR* |
| Ga0150984_1082902121 | 3300012469 | Avena Fatua Rhizosphere | QVDEVQMVPDGFGFHLRASEYTWVTLVFETKAEAEAAHSHATNAVAHAKALKIVNR* |
| Ga0150984_1091254552 | 3300012469 | Avena Fatua Rhizosphere | VDVTVQVDEVQSVPDGFGFHLKASEYTWITLVFETKDEAEAAHSHAAKAVAQAKALKIVNR* |
| Ga0150984_1104023551 | 3300012469 | Avena Fatua Rhizosphere | DGFGFHLKASEYTWITLVFETKGEAEAAHSHAAKAVAQAKTLKIVNR* |
| Ga0150984_1118428661 | 3300012469 | Avena Fatua Rhizosphere | QVDEVQMVPDGFGFHLRASEYTWVTLVFETKAEAEAAHSHAANAVAHAKALKIVNR* |
| Ga0150984_1141280311 | 3300012469 | Avena Fatua Rhizosphere | QGLLACVINGFPVEVAVTVQVDEVQSVPDGFGFHLKASEYTWITVVFETKDEAEAAHKHAAKAVDGAKALKIVNR* |
| Ga0150984_1146487481 | 3300012469 | Avena Fatua Rhizosphere | SYQRRCDVTVQVDEVQMVPDGFGFHLKASEYTWVTLVFETKDEAEAAHGHAAKAVTRAKALKIVNR* |
| Ga0150984_1153235282 | 3300012469 | Avena Fatua Rhizosphere | VSIQVDEVQSVPDGFGFHLKASEYTWVTLVFETKEEAEAAHSHAAKVVAHAKALKIVNR* |
| Ga0150984_1157208132 | 3300012469 | Avena Fatua Rhizosphere | VDVTVQVDEVQSVPDGFGFHLKASEYTWITLVFDNKAEAEAAHSHAEKAVAKAKALKVVNR* |
| Ga0150984_1202488783 | 3300012469 | Avena Fatua Rhizosphere | DMNVQVDEVQMVPDGFGFHLRASEYTWVTLVFESKDEAEAAHSHAGKAVAHAKALKIVNR |
| Ga0162650_1000845461 | 3300012939 | Soil | VLSKLQFIGAFQWRPNVSIQVDEVQSVPDGFGFHLKASEYTWITLVFETKKEAEGAHSHAAKAVANARS* |
| Ga0162652_1000550551 | 3300012941 | Soil | VSIQVDEVQSVPDGFGFHLKASEHTWITLVFETKKEAEAAHSHAAKAVANAKELKIVNR* |
| Ga0157372_118327793 | 3300013307 | Corn Rhizosphere | VPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR* |
| Ga0157375_109563411 | 3300013308 | Miscanthus Rhizosphere | SVPDGFGFHLKASEYTWITLVFDTKAEAEAAHSHAEKAVAKAKALKVVNR* |
| Ga0157375_131604641 | 3300013308 | Miscanthus Rhizosphere | MMLPTEVDVTVQIDEVQSVPDGFGFHLKASEYTWITLVFDTKAEADAGHNHAAKAVAQAKALKIVNR* |
| Ga0163163_103088692 | 3300014325 | Switchgrass Rhizosphere | MVPDGFGFHLQAGEYTWVTLVFETKHEAEAAHSHAAKAVAHAKALKIVNR* |
| Ga0157380_134801521 | 3300014326 | Switchgrass Rhizosphere | MMLPAEVDVTFQVDEVQSVPDGFGFHLKASEYTWITVVFETKDEAEAAHKHAAKAVDGAKALQIVNR* |
| Ga0132258_121396881 | 3300015371 | Arabidopsis Rhizosphere | LNRAIDTSFIGVVVFRRRLEVNVRVDDVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAK |
| Ga0132256_1022525512 | 3300015372 | Arabidopsis Rhizosphere | LFFERRLEVNVRVDEVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIV |
| Ga0184604_100409921 | 3300018000 | Groundwater Sediment | MKIQVDEVQMVPDGFGFHIQASEYTWITLVFETKSAAETAHGHAAKAVANATAVKIVNR |
| Ga0184605_102451211 | 3300018027 | Groundwater Sediment | VQMVPDGFGFHIQASEYTWITLVFETKSAAETAHGHAAKAVANATAVKIVNR |
| Ga0184624_102614612 | 3300018073 | Groundwater Sediment | MTVQVDSVQMVPDGFGFHIKASEYTWITVVFETKREAEAAHSHAEKAVAHAKAVKIVKR |
| Ga0184633_104502291 | 3300018077 | Groundwater Sediment | QMVPDGFGFHLQASEYTWVTLVFDTKDEAKAAHSHASKAVANAKALKIVNR |
| Ga0190270_102527283 | 3300018469 | Soil | VTVQVDEVQSVPDGFGFHLKASEYTWITLVFDNKAEAEAAHSHAEKAVAKAKALKVVNR |
| Ga0190270_103170252 | 3300018469 | Soil | MLPAEVDVTIQVDEVQSVPDGFGFHLKASEYTWITLVFDTKAEAEAAHSHAEKAVGKAKALKVVRR |
| Ga0190270_114836013 | 3300018469 | Soil | PDGFGFHLKLSEYTWITLVFETKAEAETAHGHAAKAVAHAKSFKIVHK |
| Ga0190274_109512561 | 3300018476 | Soil | VTVQVDEVQMVPDGFGFHLKASEYTWVTLVFETKDEAQAAHGHAAKAVARAKALKIVNR |
| Ga0184644_17427872 | 3300019269 | Groundwater Sediment | MTVQVDSVQMVPDGFGFHIKASEYTWITLVFETKREAEAAHSHAEKAVAHAKTVKIVKR |
| Ga0173481_105669681 | 3300019356 | Soil | VNVRVDDVQMVPDGFGFHLQASEYTWVTLVFDTKDEAKAAHSHAAKAVANAKALKIVNR |
| Ga0210380_101654842 | 3300021082 | Groundwater Sediment | QMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKTKALKIVNR |
| Ga0222624_13101034 | 3300021951 | Groundwater Sediment | MTVQVDSVQMVPDGFGFHIKASEYTWITLVFETKREAEAAHSHAEKAVAQAKAVKIVKR |
| Ga0222622_114161661 | 3300022756 | Groundwater Sediment | VNVHVDDVQMVPDGFGFHLQASEYTWVTLVFDTKDEAKAAHSHASKAVANAKALKIVNR |
| Ga0207642_106648892 | 3300025899 | Miscanthus Rhizosphere | VTVQVDEVQSVPDGFGFHLKASEYTWITVVFETKDEAEAAHKHAAKAVDGAKALQILNR |
| Ga0207645_102067353 | 3300025907 | Miscanthus Rhizosphere | VNVRVDDVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR |
| Ga0207657_102859373 | 3300025919 | Corn Rhizosphere | DVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR |
| Ga0207650_100295912 | 3300025925 | Switchgrass Rhizosphere | VNVQVDEVQMVPDGFGFHLQAGEYTWVTLVFETKHEAEAAHSHAAKAVAHAKALKIVNR |
| Ga0207701_103854502 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | TSFIGVVVLRRRLEVNVRVDDVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR |
| Ga0207711_102503403 | 3300025941 | Switchgrass Rhizosphere | VNVRVDEVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKSLKIVNR |
| Ga0207712_112330091 | 3300025961 | Switchgrass Rhizosphere | VLDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR |
| Ga0207658_103232392 | 3300025986 | Switchgrass Rhizosphere | MVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR |
| Ga0207703_101468211 | 3300026035 | Switchgrass Rhizosphere | VPSILRLSVLLFFERRLEVNVRVDEVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR |
| Ga0207703_113630621 | 3300026035 | Switchgrass Rhizosphere | MMLPTEVDVTVQIDEVQSVPDGFGFHLKASEYTWITLVFDTKAEAEAAHSHAEKAVAKAKALKVVNR |
| Ga0207674_109340113 | 3300026116 | Corn Rhizosphere | MNVQVDEVQMVPDGFGFHLRASEYTWVTLVFESKDEAEAAHGHAAKAVAKAKALKIVNR |
| Ga0268266_102382623 | 3300028379 | Switchgrass Rhizosphere | ILRLSVLLFFERRLEVNVRVDEVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR |
| Ga0268266_123124982 | 3300028379 | Switchgrass Rhizosphere | MMLPAEVDVTVQIDEVQSVPDGFGFHLKASEYTWITLVFDTKAEAEAAHSHAEKAVAKAKALKVVNR |
| Ga0268265_103911901 | 3300028380 | Switchgrass Rhizosphere | EVQMVPDGFGFHLQASEYTWVTLVFETKAEAEAAHSHAAKAVAKAKALKIVNR |
| Ga0247818_104824532 | 3300028589 | Soil | VNVRVDEVQMVPDGFGFHLQASEYTWVTLDFETKAEAEAAHSHAAKAVAKAKALKIVNR |
| Ga0307322_102081951 | 3300028710 | Soil | VTVQVDEVQMVPDGFGFHLKASEYTWVTLVFETKDEAEAAHGHAAKAVTRAKALKIVNR |
| Ga0307285_100146761 | 3300028712 | Soil | VDEVQMVPDGFGFHIQASEYTWITLVFETKSAAETAHGHAAKAVANATAVKIVNR |
| Ga0307285_101245412 | 3300028712 | Soil | VPDGFGFHLRASEYTWVTLVFETKDEAKAAHSHAAKAVAQAKALKIVNR |
| Ga0307297_103873251 | 3300028754 | Soil | VSIQVDEVQSVPDGFGFHLKASEYTWVTLVFETKDEAQAAHGHAAKAVARAKALKIVNR |
| Ga0307316_103206721 | 3300028755 | Soil | VQMVPDGFGFHIKASEYTWITLVFETKREAEAAHSHAEKAVAQAKAVKIVKR |
| Ga0307288_104358962 | 3300028778 | Soil | MKIQVDEVQMVPEGFGFHIQASEYTWITLVFETKSAAETAHGHAAKAVANATAVKIVNR |
| Ga0307503_100573813 | 3300028802 | Soil | VNVRVDDVQMVPDGFGFHLQASEYTWVTLIFETKAEAEAAHSHAAKAVAKAKALKIVNR |
| Ga0307296_107787941 | 3300028819 | Soil | MMLPAEVDVTVQVDEVQSVPDGFGFHLKASEYTWITLVFDNKAEAEAAHSHAEKVVAKAKALKVVNR |
| Ga0307310_106216871 | 3300028824 | Soil | LSILPSLIHGRYQRRCDVTVQVDEVQMVPDGFGFHLKASEYTWVTLVFETKDEAEAAHGHAAKAVTRAKALKIVNR |
| Ga0307300_101501312 | 3300028880 | Soil | MKIQVDEVQMIPDGFGFHIQASEYTWITLVFETKSAAETAHGHAAKAVANATAVKIVNR |
| Ga0308200_10178431 | 3300030905 | Soil | KLPLLAMIHPGEVDVTVQVDEVQSVPDGFGFHLKASEYTWITLVFDNKAEAEAAHSHAEKAVAKAKALKVVNR |
| Ga0308189_102346082 | 3300031058 | Soil | RLEVNVRVDEVQMVPDGFGFHVQASEYTWITLVFDTKDEAKAAHSHAAKAVAKAKALKIVNR |
| Ga0308189_104954431 | 3300031058 | Soil | VTVQVDEVQSVPDGFGFHLKASEYTWVTLVFESKGEAEAAHSHAAKAVAHAKALKIVNR |
| Ga0308189_105003163 | 3300031058 | Soil | VDEVQMVPDGFGFHLRASEYTWVTLVFESKDEAEAAHSHAGKAVAHAKALKIVNR |
| Ga0308201_103683612 | 3300031091 | Soil | RRCVVNVQVDEVQNVPDGFGFHLRASEYTWVTLVFETKDEAKAAHSHAAKAVAQAKALKIVNR |
| Ga0308197_103528932 | 3300031093 | Soil | QVDEVQSVPDGFGFHLKASEYTWITLVFDNKAEAEAAHSHAEKAVAKAKALKVVNR |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |