Metagenome Family F088164

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088164
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	73 residues
Representative Sequence	VTGRRDAAWLAGLADTLTEVDEFLRSPAGHAALKAFYAARGSIAPGFEAGNLIDDVGFTALWLRGNAAPQAQRS
Number of Associated Samples	92
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.82 %
% of genes near scaffold ends (potentially truncated)	27.52 %
% of genes from short scaffolds (< 2000 bps)	72.48 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.018 % of family members)
Environment Ontology (ENVO)	Unclassified (25.688 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.028 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.88% β-sheet: 0.00% Coil/Unstructured: 44.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00665	rve	15.60
PF01695	IstB_IS21	10.09
PF13586	DDE_Tnp_1_2	0.92
PF02899	Phage_int_SAM_1	0.92
PF01315	Ald_Xan_dh_C	0.92
PF00589	Phage_integrase	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	15.60
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	15.60
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	15.60
COG4584	Transposase	Mobilome: prophages, transposons [X]	15.60
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	10.09
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.92
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.25 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.25 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.25 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.99 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	88.99 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	74.31 %
Unclassified	root	N/A	2.75 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	22.02 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	5.50 %
Unclassified	root	N/A	2.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22.02 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.75 %
Carbonactinosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Carbonactinosporaceae	2.75 %
Unclassified	root	N/A	2.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22.02 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.75 %
Carbonactinospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Carbonactinosporaceae → Carbonactinospora	2.75 %
Unclassified	root	N/A	2.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.83 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	22.02 %
Carbonactinospora thermoautotrophica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Carbonactinosporaceae → Carbonactinospora → Carbonactinospora thermoautotrophica	2.75 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.75 %
Unclassified	root	N/A	2.75 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004091\|Ga0062387_100657730	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300005332\|Ga0066388_100029743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5091	Open in IMG/M
3300005332\|Ga0066388_100172448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2764	Open in IMG/M
3300005435\|Ga0070714_100335021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1418	Open in IMG/M
3300005445\|Ga0070708_100672735	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300005467\|Ga0070706_101880249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300005518\|Ga0070699_101236575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300005610\|Ga0070763_10706297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	591	Open in IMG/M
3300005900\|Ga0075272_1027259	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300006028\|Ga0070717_10122097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2233	Open in IMG/M
3300009038\|Ga0099829_10062077	All Organisms → cellular organisms → Bacteria	2807	Open in IMG/M
3300009088\|Ga0099830_10416360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1088	Open in IMG/M
3300009090\|Ga0099827_10051751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3091	Open in IMG/M
3300009090\|Ga0099827_11108367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300009525\|Ga0116220_10542941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300009645\|Ga0116106_1138981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300009683\|Ga0116224_10154479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1104	Open in IMG/M
3300009824\|Ga0116219_10239303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1032	Open in IMG/M
3300010341\|Ga0074045_10014391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6419	Open in IMG/M
3300010341\|Ga0074045_10084672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2214	Open in IMG/M
3300010360\|Ga0126372_10361335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1307	Open in IMG/M
3300010376\|Ga0126381_100886409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1284	Open in IMG/M
3300011269\|Ga0137392_11478539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300011270\|Ga0137391_10323022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1328	Open in IMG/M
3300012189\|Ga0137388_10539574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1084	Open in IMG/M
3300012189\|Ga0137388_10719331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	927	Open in IMG/M
3300012201\|Ga0137365_10815513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300012204\|Ga0137374_10030969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5850	Open in IMG/M
3300012206\|Ga0137380_10001525	All Organisms → cellular organisms → Bacteria	18921	Open in IMG/M
3300012206\|Ga0137380_11615034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300012209\|Ga0137379_10923072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	778	Open in IMG/M
3300012210\|Ga0137378_11779475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300012350\|Ga0137372_10054706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3505	Open in IMG/M
3300012350\|Ga0137372_10118589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2196	Open in IMG/M
3300012351\|Ga0137386_10491102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	884	Open in IMG/M
3300012532\|Ga0137373_10694289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	759	Open in IMG/M
3300012683\|Ga0137398_10559470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	789	Open in IMG/M
3300012917\|Ga0137395_10548611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	834	Open in IMG/M
3300014052\|Ga0120109_1021445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1441	Open in IMG/M
3300014489\|Ga0182018_10679821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300017821\|Ga0187812_1003540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5389	Open in IMG/M
3300017823\|Ga0187818_10259670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	760	Open in IMG/M
3300017823\|Ga0187818_10393981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Carbonactinosporaceae → Carbonactinospora → Carbonactinospora thermoautotrophica	614	Open in IMG/M
3300017926\|Ga0187807_1313886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300017932\|Ga0187814_10033862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1898	Open in IMG/M
3300017933\|Ga0187801_10330996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300017943\|Ga0187819_10252332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1032	Open in IMG/M
3300017943\|Ga0187819_10414998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	773	Open in IMG/M
3300017955\|Ga0187817_10055370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2451	Open in IMG/M
3300017959\|Ga0187779_10236096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1154	Open in IMG/M
3300017959\|Ga0187779_11103536	Not Available	554	Open in IMG/M
3300017961\|Ga0187778_10170205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1380	Open in IMG/M
3300017961\|Ga0187778_10838036	Not Available	629	Open in IMG/M
3300017970\|Ga0187783_10766385	Not Available	696	Open in IMG/M
3300017972\|Ga0187781_10124213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Carbonactinosporaceae → Carbonactinospora → Carbonactinospora thermoautotrophica	1801	Open in IMG/M
3300017973\|Ga0187780_10273611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1185	Open in IMG/M
3300017973\|Ga0187780_10701249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	730	Open in IMG/M
3300017975\|Ga0187782_10185236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1555	Open in IMG/M
3300018001\|Ga0187815_10185773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	880	Open in IMG/M
3300018007\|Ga0187805_10107748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1261	Open in IMG/M
3300018014\|Ga0187860_1197888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	826	Open in IMG/M
3300018032\|Ga0187788_10245252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300018034\|Ga0187863_10372693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	795	Open in IMG/M
3300018037\|Ga0187883_10564002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300018038\|Ga0187855_10044325	All Organisms → cellular organisms → Bacteria	2791	Open in IMG/M
3300018043\|Ga0187887_10153650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1377	Open in IMG/M
3300018046\|Ga0187851_10566586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300018058\|Ga0187766_10093340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1816	Open in IMG/M
3300018058\|Ga0187766_10125427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1576	Open in IMG/M
3300018064\|Ga0187773_10679302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	640	Open in IMG/M
3300020582\|Ga0210395_10020027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4925	Open in IMG/M
3300021086\|Ga0179596_10441564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300021377\|Ga0213874_10050239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1277	Open in IMG/M
3300021444\|Ga0213878_10057400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1530	Open in IMG/M
3300021476\|Ga0187846_10041040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2067	Open in IMG/M
3300021476\|Ga0187846_10080655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1413	Open in IMG/M
3300025910\|Ga0207684_11244358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300026021\|Ga0208140_1016209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1058	Open in IMG/M
3300027696\|Ga0208696_1015158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3002	Open in IMG/M
3300027696\|Ga0208696_1042225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1620	Open in IMG/M
3300027829\|Ga0209773_10123311	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300027846\|Ga0209180_10018245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3693	Open in IMG/M
3300027855\|Ga0209693_10167817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1083	Open in IMG/M
3300027862\|Ga0209701_10742146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300027882\|Ga0209590_10023018	All Organisms → cellular organisms → Bacteria	3177	Open in IMG/M
3300027889\|Ga0209380_10264876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1010	Open in IMG/M
3300028877\|Ga0302235_10028713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2886	Open in IMG/M
3300028877\|Ga0302235_10502047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515	Open in IMG/M
3300029951\|Ga0311371_10320293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2170	Open in IMG/M
3300029999\|Ga0311339_10314926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1675	Open in IMG/M
3300030056\|Ga0302181_10018568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4017	Open in IMG/M
3300030490\|Ga0302184_10049126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2063	Open in IMG/M
3300030494\|Ga0310037_10002388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	9727	Open in IMG/M
3300030707\|Ga0310038_10278380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	763	Open in IMG/M
3300031027\|Ga0302308_10702953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300031543\|Ga0318516_10012999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4079	Open in IMG/M
3300031668\|Ga0318542_10029156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2360	Open in IMG/M
3300031671\|Ga0307372_10392301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300031715\|Ga0307476_10325171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1130	Open in IMG/M
3300031724\|Ga0318500_10523465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300031748\|Ga0318492_10728343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300031753\|Ga0307477_10050223	All Organisms → cellular organisms → Bacteria	2868	Open in IMG/M
3300031893\|Ga0318536_10532346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300032025\|Ga0318507_10543338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300032770\|Ga0335085_10087459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4069	Open in IMG/M
3300032770\|Ga0335085_10156751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Carbonactinosporaceae → Carbonactinospora → Carbonactinospora thermoautotrophica	2847	Open in IMG/M
3300032770\|Ga0335085_11764116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300032805\|Ga0335078_10107138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4024	Open in IMG/M
3300034199\|Ga0370514_044756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1109	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.08%
Host-Associated	Host-Associated	0.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.73%
Aquatic	Environmental → Aquatic	18.35%
Plants	Host-Associated → Plants	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.48%
Freshwater	Environmental → Aquatic → Freshwater	18.35%
Peat	Environmental → Terrestrial → Peat	6.42%
Cave	Environmental → Terrestrial → Cave	1.83%
Roots	Host-Associated → Plants → Roots	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	21.10%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.35%
Loam	Environmental → Terrestrial → Soil → Loam	10.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.42%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.83%
Clay	Environmental → Terrestrial → Soil → Clay	0.92%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	20.18%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	10.09%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.26%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.59%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.92%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.02%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	11.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	10.09%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.42%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.67%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.75%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.83%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.83%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.83%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.83%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.83%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.92%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.92%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.92%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.92%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005900	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_404	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026021	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_404 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062387_1006577302	3300004091	Bog Forest Soil	VTRRDDPAWLASLAETLTEVDEFLRSPAGHAALDGFYAARGRPGFDAGNLIDAVSFTALSLRSNAAPQARQP*
Ga0066388_1000297433	3300005332	Tropical Forest Soil	MTGRGDAAWLADLAGTLTEVDEFLRSAAGHAALEGFYRARGSIVPGFAAGNLIDEVSFTALVLRGRAARQPQHS*
Ga0066388_1001724482	3300005332	Tropical Forest Soil	MNGHDEAAWLADVADTLAEVDQFLRTPAGHAALEDFYQARGSLPAGFVAANLIDAVSFTALLARNRAAAAARRS*
Ga0070714_1003350212	3300005435	Agricultural Soil	VTRRGTAWLAGLADTLTEVDEFLRSPGGHAALKAFYAARGSIAPGFEAGNLIDDVGFTALWLRGRAAPQAQRT*
Ga0070708_1006727352	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTGRGDPAWLADLADTLAEVDEFLRSPAGHAALEDFYRARGSIAAGHHAGNLIDEVSFTALWLRLGRPQARRC*
Ga0070706_1018802491	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTGRGDPAWLADLADTLAEVDEFLRSPAGHAALEDFYRARGSIAAGHHAGNLIDDVSFTALWLRLGRPQARRC*
Ga0070699_1012365752	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VTGRGDPAWLADLADTLAEVDEFLRSPAGHAALEDFYRARGSIAAGHHAGNLIDDVSFTALWLRLGRPQAR
Ga0070763_107062972	3300005610	Soil	VTGRGDAAWLADLAGTLAEVDEFLRSPAGHAALKDFYQARGSNAPGFEAGNLIDAAGFTALWLRGKGAPQARRS*
Ga0075272_10272592	3300005900	Rice Paddy Soil	MTGRGGEAWLAGLAGTLTEVDEFLRSPAGHAALEDFCAARGSRAAGFNAGYLIDSVGFTALWLRSQAAQQARSS*
Ga0070717_101220973	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PARHLGLGRVRHRAGDRAVTRRGTAWLAGLADTLTEVDEFLRSPGGHAALKAFYAARGSIAPGFEAGNLIDDVGFTALWLRGRAAPQAQRT*
Ga0099829_100620772	3300009038	Vadose Zone Soil	MTGRKDTAWLAGLADTLTEVGEFLRSPAGHAALEDFYACGGSRAAGFNAGYLIGSAGFTALWLRSQAAQQAPRS*
Ga0099830_104163602	3300009088	Vadose Zone Soil	LGRVRHHAGDDVMTGRKDEAWLADLADTLTEVDEFLRSPAGHAALEDFYACGGSRAAGFNAGYLIGSAGFTALWLRSQAAQQAPRS*
Ga0099827_100517512	3300009090	Vadose Zone Soil	MTGRDDAAWLADLAGTLTEVDEFLRTPAGIAALTGFFRARGSVSPRFDAGALIDEVSFTALWLRGRAAPQARRG*
Ga0099827_111083672	3300009090	Vadose Zone Soil	MTGRDDLAWLADLAGTLTEVDEFLRTPAGHAALEGFYQARGSIAAGFEAGNLIDAVSFTALWLRGRAASPARRS*
Ga0116220_105429412	3300009525	Peatlands Soil	MTGRGDAAWLADLAGTLAEVDEFLRSPAGHAALKDFYQARGSNAPGFEAGNLIDAVGFTALWLRLGRPQAQRS*
Ga0116106_11389812	3300009645	Peatland	MTRRGDAAWLAGLADTLTEVDEFLRTPAGIAALEDFYQARGSIAPGFEAGTLIDEVSFTAFLLRGRAAPQARRP*
Ga0116224_101544792	3300009683	Peatlands Soil	VTRRDTAWLAGLADTLTEVDQFLRSPAGHAALTAFYAARGSIAPGFEAGNLIDDVGFTALWLRGKTAPQAQRS*
Ga0116219_102393031	3300009824	Peatlands Soil	VTRRDTAWLAGLADTLTEVDQFLRSPAGHAALTAFYAARGSIAPGFEAGNLIDDVGFTALWLRGKTAPQAQRP*
Ga0074045_100143915	3300010341	Bog Forest Soil	MTGRRDTAWFADLADTLTQVDEFLRSPAGHAALEDFYATRGGIAGGYDAGLLIDSVGFTALWLRNRAHPQDQRS*
Ga0074045_100846722	3300010341	Bog Forest Soil	VTGRDDAAGLAGLADMLAEVDEFLRTPAGIAALTGFFRDRGSVSPRFGAGTLIDEVSFTALVLRGRAAPQARRS*
Ga0126372_103613352	3300010360	Tropical Forest Soil	MNGHDEAAWLADVADTLAEVDQFLRTPAGHAALEDFYQARGSLPAGFVAGNLIDAVSFTALLARNRAAAAARRS*
Ga0126381_1008864092	3300010376	Tropical Forest Soil	VTGRGEAAWLADLAGTLAEVDEFLRSPAGHAAMEVFYQARGSISPGFEAGNLIDAVGFTALWLRLGRPQARRS*
Ga0137392_114785392	3300011269	Vadose Zone Soil	MTGRKDEAWLADLADTLTEVDEFLRSPAGHAALEDFYAARGSRAAGFNAGYLIDSVSFTALWLRMGRPQERRS*
Ga0137391_103230222	3300011270	Vadose Zone Soil	MTGRKDTAWLAGLADTLTEVGEFLRSPAGHAALEDFYACGGSRAAGFNAGYLIDSAGFTALWLRSQAAQQAPRS*
Ga0137388_105395742	3300012189	Vadose Zone Soil	VTGRGDKAWLAGLADTLAEVDEFLRSPAGHAALEDFYAARGSLAPGFGAGNLIDAAGFTALSLHTRFAGEPHR*
Ga0137388_107193312	3300012189	Vadose Zone Soil	MTGRGDAAWLADLADTLGEVDEFLRTPAGHAALQDFYAARGSIAAGFEAGNLIDAVSFTALWLRGQPAPQARRP*
Ga0137365_108155132	3300012201	Vadose Zone Soil	VTGREDAAWLADLAGTLAEVDEFLRTPAGHAALEGFYTARGSIAAGFEAGNLIDAVGFTALSLHTRFAGEPHR*
Ga0137374_100309694	3300012204	Vadose Zone Soil	MTGRDDAAWLTDLAGTLAEVDEFLRTPAGHAALEDFYQARGGLPAGFHVGNLIDAVSFTALWLRGPAAPQALRP*
Ga0137380_100015253	3300012206	Vadose Zone Soil	VTGRGDKAWLAGLADTLAEVDEFLRSPAGHAALQDFYAARGSLAPGFEAGNLIDAVGFTALSLHTRFAGEPHR*
Ga0137380_116150341	3300012206	Vadose Zone Soil	DLAGTLAEVDEFLRTPAGHAALEGFYTARGSIAAGFEAGNLIDAVSFTALWLRGRAAPQAPRS*
Ga0137379_109230722	3300012209	Vadose Zone Soil	VTGRGDPAWLADLASTLTGVDEFLRSPAGHAALEDFCAARGSIGPGHDADLLIDDVSFTAPWLRMGRPQERRS*
Ga0137378_117794752	3300012210	Vadose Zone Soil	MTGRGHAAWLADLADTLTGVDEFLRSPAGHAALRDFYAARGGIAAGFEAGNLIDAVSFTALWLRSKAAPQARQP*
Ga0137372_100547063	3300012350	Vadose Zone Soil	VTGREDAAWLADLAGTLAEVDEFLRTPAGHAALEGFYTARGSIAAGFEAGNLIDAVSFTALWLRGRAAPQAPRS*
Ga0137372_101185891	3300012350	Vadose Zone Soil	MTGRGHAAWLADLADTLTGVDEFLRSPAGHAALRDFYAARGGIAAGFEAGNLIDAVSFTALWLRGRTGPQARRS*
Ga0137386_104911022	3300012351	Vadose Zone Soil	VTGRGDPAWLADLASTLTGVDEFLRSPAGHAALKDFYAARGSIGPGHDADLLIDDVSFTAPWLRMGRPQERRS*
Ga0137373_106942891	3300012532	Vadose Zone Soil	MTGRGHAAWLADLADTLTGVDEFLRSPAGHAALEDFCAARGSIGPGHDADLLIDDVSFTAPWLRMGRPQERRS*
Ga0137398_105594702	3300012683	Vadose Zone Soil	MTGRSDPTWLADLAGTLTQVDEFLRSPAGHAALEDYCQARGSIAPGHDAGNLIDEVSFTALWLRMGRPQERRS*
Ga0137395_105486112	3300012917	Vadose Zone Soil	MTGRGDAAWLADLAGTLTEVDEFLRSPAGHAALQEFCQARGSIAAGFEAGNLIDAVSFAALWLRGKAAPQARRS*
Ga0120109_10214451	3300014052	Permafrost	MTGRDDAAWLADLADTLAEVDEFLRTPAGIAALTGFFRDRGSVSPRFEAGTLIDEVSFTALM
Ga0182018_106798211	3300014489	Palsa	SAGDRAVTRRDNQAWLAGLAETLTEVDEFLRSPAGHAALNDFYAARGSISPGFDAGNLIDAVGFTALWLRGKAAPQARQS*
Ga0187812_10035405	3300017821	Freshwater Sediment	VTGRIGKAQLAGLADMLAEVDQFLRSPAGHAALEEYYAARGSTGPGFDAGNLVDWVSFTALWLRGKAAPQAPRS
Ga0187818_102596702	3300017823	Freshwater Sediment	VTGRIGKAQLAGLADMLAEVDQFLRSPAGHAALEEYYAARGSTGPGFDAGNLIDWVSFTELWLRGKAAPQAQQRF
Ga0187818_103939811	3300017823	Freshwater Sediment	GKAQLAGLADMLAEVDQFLRSAAGHAALEEYYAARSSTGPGSGAGNLVDWVSFTALWLRGKAAPQAPRS
Ga0187807_13138862	3300017926	Freshwater Sediment	MTGRGDAAWLADLAGTLAEVDEFLRSPAGHAALEGFYQALGSIAPGHDAGNLIDEVSFTALWLRLGRPQAQRS
Ga0187814_100338623	3300017932	Freshwater Sediment	VTGRGGTAWIADLAGTLTEVDEFLRSPAGHAALQDFYAARGSIAAGFDAGNLIDAVGFTALWLRSRAAPPAQPS
Ga0187801_103309962	3300017933	Freshwater Sediment	VTGRRDAAWLANLASTLTQVDEFLRSPAGHAALEDFYAARGSIAPGYDTGLLIDDVIFTALWLRGKAAPQPQRS
Ga0187819_102523321	3300017943	Freshwater Sediment	VTGRIGKAQLADLAAMLTEVDQFLRSPAGHAALEEYYAARGSTGPGFDAGNLIDWVSFTELWLRGKAAPQAQQRS
Ga0187819_104149982	3300017943	Freshwater Sediment	VTGRGGTAWIADLAGTLTEVDEFLRSPAGHAALQDFYAARGSIAAGFDAGNLIDAVGFTALWLRSR
Ga0187817_100553702	3300017955	Freshwater Sediment	VTGRGGTAWIADLAGTLTEVDEFLRSPAGHAALQDFYAARGSIAAGFDAGNLIDAVGFTALWLRSRAAPPARPS
Ga0187779_102360961	3300017959	Tropical Peatland	VTGRIGKAQLTGLADMLTEVDQFLRSPAGHAALEEYYAARGSIGPGFDAGNLVDWVSFTALWLRGKTAPQAPRS
Ga0187779_111035361	3300017959	Tropical Peatland	KAQLADLAAMLAEVDQFLRSAAGHVALEEYYAARGSTGPGFDAGNLVDWVSFTALWLRGRATPQAPRS
Ga0187778_101702052	3300017961	Tropical Peatland	VTGRDAWLAGLAGTLAEVDEFLRSPAGHAALKDFYAARGSIAPGLEAGNLIDAVGFTALWLRLRRPAEQRS
Ga0187778_108380362	3300017961	Tropical Peatland	AGDRAVTGRIGKAQLADLAGMLAGVDQFLRSAAGHAALEQYYAARGSTGPGFDAGNLVDWVSFTELWLRGKAAPQAPRS
Ga0187783_107663852	3300017970	Tropical Peatland	AVTGRGDPAWLAGLTSTLAEVDEFLRSPAGRAAQEDFCRARGGIVPGHAAGNLIDEVSFTALWLRLGGPQERRF
Ga0187781_101242132	3300017972	Tropical Peatland	VTGRIGEARPADLADMLTEVDQFLRSAAGHAALEEYYAARGSIGPGFDAGNLVDWVSFTALWLRGKAAPQAQRS
Ga0187780_102736112	3300017973	Tropical Peatland	VTGRRDTAWLAGLAGTLAEVDEFLRSPAGHAALKDFYAARGSAAPGFEAGNLIDAVGFTALWLRGKGAPQAQRS
Ga0187780_107012492	3300017973	Tropical Peatland	VTGRIGKAQLADLADMLTEVDQFLRSAAGHVALEEYYAARGSTGPGFDAGNLVDWVSFTALWLRGRATPQAPRS
Ga0187782_101852362	3300017975	Tropical Peatland	VTGRIGKAQLAGLAAMLAEVDQFLRSPAGHVALEEYYAARGSAGPGFDAGNLVDWVSFTALWLRGKAAPQAQRS
Ga0187815_101857732	3300018001	Freshwater Sediment	VTGRRDAAWLANLASTLTQVDEFLRSPAGHAALEDFYAARGSIAPGYDTGLLIDDVSFTALWLRGKA
Ga0187805_101077481	3300018007	Freshwater Sediment	VTGRIGKAQLAGLADMLAEVDQFLRSPAGHAALEEYYAARGSTGPGFDAGNLIDWVSFTELWLRGKAAPQAQQRS
Ga0187860_11978882	3300018014	Peatland	MTRRGDAAWLAGLADTLTEVDEFLRTPAGIAALEDFYQARGSIAPGFEAGTLIDEVSFTAFLLRGRAAPQARRP
Ga0187788_102452521	3300018032	Tropical Peatland	PARHLGLGRVRHGAGDRAVTRRDDPAWLADLAETLTEVDEFLRSPAGHAALDDFYAARGSIRPGFDAGNLIDAVSFTALWLRSKAAPQARQS
Ga0187863_103726932	3300018034	Peatland	VTRRDDQAWLAGLAETLTEVDEFLRSPAGHAALNDFYAARGSISPGFDAGNLIDAVGFTALWLRGKAAPQARQS
Ga0187883_105640021	3300018037	Peatland	VTRRDNQAWLAGLAETLTEVDEFLRSPAGHAALNDFYAARGSISPGFDAGNLIDAVGFTALWLRGKAAPQARHS
Ga0187855_100443252	3300018038	Peatland	VTRRDDQAWLAGLAETLTEVDEFLRSPAGHAALNDFYATRGSISPGFDAGNLIDAVGFTALWLRGKAAPQARHS
Ga0187887_101536502	3300018043	Peatland	VTRRDNQAWLAGLAETLTEVDEFLRSPAGHAALNDFYATRGSISPGFDAGNLIDAVGFTALWLRGKAAPQARHS
Ga0187851_105665861	3300018046	Peatland	RRGAGDRAVTRRDNHAWLAGLADTLTEVDEFLRSPAGHAALNDFYATRGSISPGFDAGNLIDAVGFTALWLRGKAAPQARHS
Ga0187766_100933403	3300018058	Tropical Peatland	VTGRIGKAQLADLAGMLAGVDQFLRSAAGHAALEQYYAARGSTGPGFDAGNLVDWVSFTELWLRGKAAPQAPRS
Ga0187766_101254273	3300018058	Tropical Peatland	VTSRISKTRLADLAGMLTEVDQFLRSAAGHAALEEYYAARGSIGPGFDAGNLVDWVSFTALWLRGKAAPQAQRS
Ga0187773_106793021	3300018064	Tropical Peatland	VTGRRDLAWLADLAGTLAEVDEFLRSPAGHAALKDFYAARGSITPGFEAGNLIDAIGFTALWLRGKAAPQEQRS
Ga0210395_100200277	3300020582	Soil	MTSRNDAAWLADLAGTLTEADEFLRSPAGHAALEEFYRAHGSIAPAFEAGNLIDAGSFTALWLRGKAAPQARQS
Ga0179596_104415642	3300021086	Vadose Zone Soil	MTGRKDTAWLAGLADTLTEVGEFLRSPAGHAALEDFYACGGSRAAGFNAGYLIDSAGFTALWLRSQAAQQAPRS
Ga0213874_100502392	3300021377	Plant Roots	VTRRDTAWLAGLADTLTEVDEFLRSPAGHAALKAFYAARGSIAPGFEAGNLIDDVGFTALWLRGQAAPQARRS
Ga0213878_100574002	3300021444	Bulk Soil	VTGRRDTAWLADLAGTLAEVDEFLRSPAGHAALKDFYAARGSAVPGFEAGNLIDAVGFTALWLRGKGAPQAQRS
Ga0187846_100410402	3300021476	Biofilm	VTGRGDAAWLADLAGTLAEVDEFLRSLAGHAALEIFYQARGGIAPAYDAGLLIDEVSFTALWPRGKAAPQAQRS
Ga0187846_100806552	3300021476	Biofilm	MTGRRDQAWLADLAITLTEVDEFLRSPAGHAALTAWYQARGSIVPGFEAGNLIDGVSFTALLLRGRAAQQQAPRS
Ga0207684_112443582	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTGRGDPAWLADLADTLAEVDEFLRSPAGHAALEDFYRARGSIAAGHHAGNLIDDVSFTALWLRLGRPQARRC
Ga0208140_10162092	3300026021	Rice Paddy Soil	MTGRGGEAWLAGLAGTLTEVDEFLRSPAGHAALEDFCAARGSRAAGFNAGYLIDSVGFTALWLRSQAAQQARSS
Ga0208696_10151582	3300027696	Peatlands Soil	VTRRDTAWLAGLADTLTEVDQFLRSPAGHAALTAFYAARGSIAPGFEAGNLIDDVGFTALWLRGKTAPQAQRS
Ga0208696_10422251	3300027696	Peatlands Soil	GRGDAAWLADLAGTLAEVDEFLRSPAGHAALKDFYQARGSNAPGFEAGNLIDAVGFTALWLRLGRPQAQRS
Ga0209773_101233112	3300027829	Bog Forest Soil	VTRRDDPAWLASLAETLTEVDEFLRSPAGHAALDGFYAARGRPGFDAGNLIDAVSFTALSLRSNAAPQARQP
Ga0209180_100182455	3300027846	Vadose Zone Soil	MTGRKDTAWLAGLADTLTEVGEFLRSPAGHAALEDFYACGGSRAAGFNAGYLIGSAGFTALWLRSQAAQQAPRS
Ga0209693_101678172	3300027855	Soil	GDAAWLADLAGTLAEVDEFLRSPAGHAALKDFYQARGSNAPGFEAGNLIDAAGFTALWLRGKGAPQARRS
Ga0209701_107421462	3300027862	Vadose Zone Soil	GVMTGRKDTAWLAGLADTLTEVGEFLRSPAGHAALEDFYACGGSRAAGFNAGYLIGSAGFTALWLRSQAAQQAPRS
Ga0209590_100230182	3300027882	Vadose Zone Soil	MTGRDDAAWLADLAGTLTEVDEFLRTPAGIAALTGFFRARGSVSPRFDAGALIDEVSFTALWLRGRAAPQARRG
Ga0209380_102648762	3300027889	Soil	VTGRGDAAWLADLAGTLAEVDEFLRSPAGHAALKDFYQARGSNAPGFEAGNLIDAAGFTALWLRGKGAPQARRS
Ga0302235_100287132	3300028877	Palsa	VTGRGEAAWLADLAETLTEVDEFLRSPAGHAALKGFYAARGSIAAGFEAGNLIDAVGFTALWLRGRAAPRTRLS
Ga0302235_105020472	3300028877	Palsa	VTRRDNQAWLAGLAETLTEVDEFLRSPAGHAALNDFYAARGSISPGFDAGNLIDAVGFTALWLRGKAAPQARQS
Ga0311371_103202933	3300029951	Palsa	LAETLTEVDEFLRSPAGHAALKGFYAARGSTAAGFEAGNLIDAVGFTALWLRGRAAPRTRLS
Ga0311339_103149261	3300029999	Palsa	VTRRDNQAWLAGLAETLTEVDEFLRSPAGHAALNDFYAARGSISPGFDAGNLIDAVGFTALWLRGKAA
Ga0302181_100185682	3300030056	Palsa	VTGRGEAAWLADLAETLTEVDEFLRSPAGHAALKGFYAARGSTAAGFEAGNLIDAVGFTALWLRGRAAPRTRLS
Ga0302184_100491261	3300030490	Palsa	VTGRGEAAWLADLAETLTEVDEFLRSPAGHAALKGFYAARGSTAAGFEAGNLIDAVGFTALWLRGRAA
Ga0310037_100023889	3300030494	Peatlands Soil	MTGRGDAAWLADLAGTLAEVDEFLRSPAGHAALKDFYQARGSNAPGFEAGNLIDAVGFTALWLRLGRPQAQRS
Ga0310038_102783801	3300030707	Peatlands Soil	VTRRDTAWLAGLADTLTEVDQFLRSPAGHAALTAFYAARGSIAPGFEAGNLIDDVGFTALWLRGKT
Ga0302308_107029531	3300031027	Palsa	VTGRGEAAWLADLAETLTEVDEFLRSPAGHAALKGFYAARGSTAAGFEAGNLIDAVGFTA
Ga0318516_100129992	3300031543	Soil	VTGRRDLAWLADLAGTLAEVDEFLRSPAGHAALKDFYAARGSITPGFEAGNLIDAIGFTALWRRGKAAPQEQRS
Ga0318542_100291563	3300031668	Soil	LAGTLAEVDEFLRSPAGHAALKDFYAARGSITPGFEAGNLIDAIGFTALWRRGKAAPQEQRS
Ga0307372_103923012	3300031671	Soil	MTGREGAAWPAGLAGTLAEVDEFLRTPAGQAALEDFCQARGSIAAGFEAGNLIDAVSFTALWLRGPAAPRARHS
Ga0307476_103251712	3300031715	Hardwood Forest Soil	VTGRISKAQLADLADMLTEVDQFLRSVPGHAALEEYYAARGSTGPGFAAGNLIDWVSFTELWLRGKTAPQAQRS
Ga0318500_105234651	3300031724	Soil	RRDLAWLADLAGTLAEVDEFLRSPAGHAALKDFYAARGSITPGFEAGNLIDAIGFTALWRRGKAAPQEQRS
Ga0318492_107283431	3300031748	Soil	ARHLGLGRVRRGAGDRAVTGRGDKTWLAGLASTLAEVDELLRSPAGHVALEEFYQARGRIAPGYDAGLLTGDVSFTALWLRGKPAPHARRS
Ga0307477_100502233	3300031753	Hardwood Forest Soil	VTRRDDPAWLASLAETLTEVDEFLRSPAGHAALDGFCAARGSIRPGFGAGNLIDAVSFTALWLRSKAAPQARQP
Ga0318536_105323462	3300031893	Soil	VTGRRDLAWLADLAGTLAEVDEFLRSPAGHAALKDFYAARGSITPGFEAGNLIDAIGFTALWRRGKAA
Ga0318507_105433381	3300032025	Soil	VTGRRDLAWLADLAGTLAEVDEFLRSPAGHAALKDFYAARGSITPGFEAGNLIDAIGFTALWRRGKAAPQEQR
Ga0335085_100874592	3300032770	Soil	VTGRRDAAWLAGLADTLTEVDEFLRSPAGHAALKAFYAARGSIAPGFEAGNLIDDVGFTALWLRGNAAPQAQRS
Ga0335085_101567512	3300032770	Soil	VTGRIGEAQLADLADMLTEVDQFLRSAAGHAALEEYYAARGSIGPGFDAGNLVDWVSFTALWLRGKAAPQAQRS
Ga0335085_117641162	3300032770	Soil	RDTAWLAGLADTLTEVDEFLRSPAGHAALKAFYAARGSIGPGFEAGNLIDDVGFTALWLRGQAAPQARQS
Ga0335078_101071383	3300032805	Soil	VTGRIGKTQLTDLADMLTEVDQFLRSAAGHAALEEYYAARGSTGPGCDAGNLVDWVSFTALWLRGKAAPQAQRS
Ga0370514_044756_888_1109	3300034199	Untreated Peat Soil	TRRDNQAWLAGLAETLTEVDEFLRSPAGHAALNDFYAARGSISPGFDAGNLIDAVGFTALWLRGKAAPQARQS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088164

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences