Metagenome Family F088138

Basic Information
Family ID	F088138
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	48 residues
Representative Sequence	LSDEGDEDEDDTGRLSELIALAEAGLQAEEAEDDTGRLSELIALAEVGL
Number of Associated Samples	58
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	11.76 %
% of genes near scaffold ends (potentially truncated)	9.17 %
% of genes from short scaffolds (< 2000 bps)	15.60 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (93.578 % of family members)
Environment Ontology (ENVO)	Unclassified (94.495 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (93.578 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.55% β-sheet: 0.00% Coil/Unstructured: 45.45%
Feature Viewer

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Scaffold	Taxonomy	Length	IMG/M Link
3300015267\|Ga0182122_1028572	Not Available	651	Open in IMG/M
3300015268\|Ga0182154_1053576	Not Available	552	Open in IMG/M
3300015282\|Ga0182124_1067861	Not Available	533	Open in IMG/M
3300015288\|Ga0182173_1062702	Not Available	554	Open in IMG/M
3300015289\|Ga0182138_1016204	Not Available	813	Open in IMG/M
3300015298\|Ga0182106_1036362	Not Available	686	Open in IMG/M
3300015321\|Ga0182127_1088830	Not Available	561	Open in IMG/M
3300015323\|Ga0182129_1064863	Not Available	600	Open in IMG/M
3300015347\|Ga0182177_1228887	Not Available	519	Open in IMG/M
3300017413\|Ga0182222_1069280	Not Available	566	Open in IMG/M
3300017417\|Ga0182230_1028328	Not Available	978	Open in IMG/M
3300017424\|Ga0182219_1127210	Not Available	518	Open in IMG/M
3300017424\|Ga0182219_1136382	Not Available	507	Open in IMG/M
3300017425\|Ga0182224_1113113	Not Available	570	Open in IMG/M
3300017433\|Ga0182206_1078198	Not Available	632	Open in IMG/M
3300017683\|Ga0182218_1038079	Not Available	768	Open in IMG/M
3300025937\|Ga0207669_11334973	Not Available	610	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	98.17%
Environmental	Environmental	0.92%
Engineered	Engineered	0.92%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	98.17%
Terrestrial	Environmental → Terrestrial	0.92%
Bioreactor	Engineered → Bioreactor	0.92%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	93.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.67%
Soil	Environmental → Terrestrial → Soil	0.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.92%
Anaerobic	Engineered → Bioreactor → Anaerobic	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	93.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.92%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	93.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.75%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.92%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	93.58%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.92%
Food Waste	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Food Waste	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015267	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015268	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015269	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015274	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015275	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015276	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015277	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015282	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015283	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015285	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015287	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015288	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015289	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015292	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015295	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015298	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015299	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015303	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015304	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015307	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015308	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015314	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015321	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015322	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015323	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015341	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015345	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015361	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300017407	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017411	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017413	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017417	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017424	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017425	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017427	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017430	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017433	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017436	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017680	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017682	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017683	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017684	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017686	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017690	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300021971	Food waste and fibre mixture microbial community, University of Toronto, Ontario, Canada - LBfeed2 spades	Engineered	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0105243_130427451	3300009148	Miscanthus Rhizosphere	EDEDDTARLSDLIALAEVGLQAEEAEDDTSRLSELIALAEAGL*
Ga0157378_130704401	3300013297	Miscanthus Rhizosphere	VLSDEGDEDEDDTTRLSELIALAEAGTQAQEAEDDTGRLNELIALAEAGM*
Ga0157378_131964452	3300013297	Miscanthus Rhizosphere	VLDNEGDEDEDDNGRLSDLITLAEVGLQVEKDEDDTGRLSEPIALAEAGL*
Ga0182122_10285723	3300015267	Miscanthus Phyllosphere	VGLQVEEAKDNTGRLSELIALAEAGLQEEEAEDDTSRLSELI
Ga0182154_10535762	3300015268	Miscanthus Phyllosphere	DDTARLSELIALAEAGLQTEEAEDDTGRLSELIALAEVGL*
Ga0182113_10380822	3300015269	Miscanthus Phyllosphere	VLADDWGEDEDDTAQLSDLIALAEAGLQAEEAEDDTGRLCELFALAETGL*
Ga0182113_10541992	3300015269	Miscanthus Phyllosphere	VETSEGGEDEDNTSRLSELIALAEVGLQVEEDEDDIGRLSELIVLTEKGL*
Ga0182188_10461862	3300015274	Miscanthus Phyllosphere	VLSDEGDEGEDDIARLSDLIALAETGLQAEEVEDDTGRLSELIALAETGL*
Ga0182188_10469162	3300015274	Miscanthus Phyllosphere	VLFDGGDEDEDDTARLSELIALAEAWLQAEEAEDDTGRLRELIALAEAG
Ga0182172_10261222	3300015275	Miscanthus Phyllosphere	VGLQAEEAEDDTSRLSELIALAEAGLQAEEAEDDTGRLSELIALAEVGL*
Ga0182170_10584751	3300015276	Miscanthus Phyllosphere	VLADDGDEDEDDTAQLSDLIALAEAGLQAEEAEDDIGRLSELIALAETGL*
Ga0182170_10669682	3300015276	Miscanthus Phyllosphere	VGLQAEEAEDNTSRLSELIALAETGMQAKEAEDDTGRLSELIALAEAGLHA*
Ga0182170_10684231	3300015276	Miscanthus Phyllosphere	VLSNEGDEDEDDTARLSDLITLAEMGLQAEEAKEDNSRLSELIALAEVGLRPA*
Ga0182128_10488732	3300015277	Miscanthus Phyllosphere	VLSDEGDEDEDDTGRLSELIALAEADMQAKDDDDNTGRLSELIALAEVGL*
Ga0182124_10132841	3300015282	Miscanthus Phyllosphere	VLAGDGDEDEDDTARLSDIIALAEAGLQAEEAEDDTGRLSELIAQAEM
Ga0182124_10561803	3300015282	Miscanthus Phyllosphere	VLPDEGDEDEDDAGRLSKLIALAEAGLQAKEDDDDTGRLSEL
Ga0182124_10678611	3300015282	Miscanthus Phyllosphere	VEEAEDDTGRLSELIALAEVGLQVEEAEDDTGRLSELIALADAGLQAEEA
Ga0182156_10646282	3300015283	Miscanthus Phyllosphere	VLSDEGDEDEDDTARLSELIALAEAGLQAEEAEDDTGRLSDLIALAETGLQAEEAED
Ga0182186_10571732	3300015285	Miscanthus Phyllosphere	PIVLADDGDEDEDDTVRLSDLIALAETGLQVEEAEEDTGRLSELIAQADAGL*
Ga0182171_10288281	3300015287	Miscanthus Phyllosphere	VLSDEGDEDEDDTARLSELIALAETGLQAEEAEDDTSRLSELIAL
Ga0182173_10627021	3300015288	Miscanthus Phyllosphere	RKRAGHNVESPIVLSDEEDEDEDDTARLSELIALAEVGLQAEEAEDDTGRLSELIALAEAGL*
Ga0182138_10162042	3300015289	Miscanthus Phyllosphere	VLSDEGDKDEDDTARLSELIALAEAGLQAEEAEDDTGRLSELIALAEVGL*
Ga0182138_10228681	3300015289	Miscanthus Phyllosphere	RTVQSSIVLSDEGDEDEDDTTRLSELIALAEAGTQAQEAEDDTGRLNELIALAEAGMQA*
Ga0182125_10208253	3300015291	Miscanthus Phyllosphere	LSDLITLAEVGLQAEEAEDDTGRLSEFTALAEAGL*
Ga0182141_10205651	3300015292	Miscanthus Phyllosphere	GDEDEDDTTRLSELIALAEAGLQTEEAEDDTGRQSELIALVEVGL*
Ga0182175_10800821	3300015295	Miscanthus Phyllosphere	VLSDEGDEDENDTTRLSDLIALAEVGLQVEKAEDDTGRLSELISLAEAG
Ga0182175_10840652	3300015295	Miscanthus Phyllosphere	VGLQAEEAEDDTGRLSELITLAEVGLQAEEAKEDTGRLSELVGLAEA
Ga0182175_10995381	3300015295	Miscanthus Phyllosphere	VLSGERDEDEDDTGRLSELIALAEAGLQGKEDEDDTGRLSELIALVEVGLQAE
Ga0182157_10315902	3300015296	Miscanthus Phyllosphere	VEEAEDDTGRLSELIALAEAGLQAEETKDDTSRLSELITLA*
Ga0182157_10588593	3300015296	Miscanthus Phyllosphere	VLSDEGDEDEDDTGRLSELIALAEVGLQAEEADDDTSRLSELIAL
Ga0182106_10363622	3300015298	Miscanthus Phyllosphere	VLSAEEDEDEDDTVRLSDLIALVEAGLQAEEAEDDTGRLSDLIALAEVGL*
Ga0182107_10400182	3300015299	Miscanthus Phyllosphere	VLSDEGDEDEDDTVRLSDLIALAKVEEVEDDTVRLSELIALARAAL*
Ga0182107_10406211	3300015299	Miscanthus Phyllosphere	VLSDEGDEDEDDTVRLSELIALAEVGIQAQEAKDDTGRLSELIALVEAGL*
Ga0182107_10436012	3300015299	Miscanthus Phyllosphere	VLSDEGDEDEDDTNRLSELIGLAEVGIQMQEVEDNTGRLSELIALVEAGLQAEEDDDGFFT*
Ga0182123_10360521	3300015303	Miscanthus Phyllosphere	LSDEEDDDKDDTARLSDPIALAEAGLQTEEAKDDIGRLRELIALAEAGLQGG*
Ga0182112_10485671	3300015304	Miscanthus Phyllosphere	VEEAEDDTDRSSELITLAEVGLQAEEAEEDTGRLSELIGLAEAGL*
Ga0182112_11024302	3300015304	Miscanthus Phyllosphere	VVADEGGKDEDDTARLSDLIALEEADLQAEEDEDGTGRLSELITLA
Ga0182144_11098872	3300015307	Miscanthus Phyllosphere	VLSDEGDKDEDNTARLSDLIALAEAGLQAEEAKDDTGRLSELIALAEAGLQVE
Ga0182144_11102751	3300015307	Miscanthus Phyllosphere	MLSDERDEDEDDTGRLSELIALAEAGIQAQEAEDDIGRLSELISLAKAGIQA*
Ga0182142_11134311	3300015308	Miscanthus Phyllosphere	VLDNEGDEDEDDTARLSILIALAEAGLQAEKDEDDTGRLSELIAVAEAGL*
Ga0182140_10476472	3300015314	Miscanthus Phyllosphere	LSDLIALAEVGLQVEEDEDDIGRLSELIVLTEKGL*
Ga0182140_10570012	3300015314	Miscanthus Phyllosphere	VLTDEGGEDEDNTGRLSEIIALVEAGLQAQEAEDDTGRLSELTALA
Ga0182140_10988611	3300015314	Miscanthus Phyllosphere	VLSDEGDEDEDDTTRLSELIALAEAGTQAQEAEDDTGRLSELIALAEASI*
Ga0182127_10415443	3300015321	Miscanthus Phyllosphere	VLDNEGDEDEDDTARLSILIALAEAGLQAEKDEDDTGRLSEL
Ga0182127_10715453	3300015321	Miscanthus Phyllosphere	DTGRLSELIALAEADLQTEEAEDDTDRLSELITLADVGLQAEEDGR*
Ga0182127_10888301	3300015321	Miscanthus Phyllosphere	VQSPIVWSDEGDEDKDDTARLSKLIALAEAGLQVEEAEDDIGRLRELIALAEAGL*
Ga0182127_11240592	3300015321	Miscanthus Phyllosphere	VLSDEGDEDEDDTTRLSELIALAEAGTQAQEAEDDTGRLSELIALAEAGMQA*
Ga0182110_10680471	3300015322	Miscanthus Phyllosphere	VLSDEGDEDEDDIARLSELIALAETGLQVEEAEDDTGRLSELI
Ga0182129_10445951	3300015323	Miscanthus Phyllosphere	MQAQEAEDDTDRLSELIALALAGMQAKEAEDDTGRLSKLIALVEAGL*
Ga0182129_10648632	3300015323	Miscanthus Phyllosphere	VLCDEGDEDEDDTGRLSELIALAEAGMQTQEAEDDTGSLSELIALAKMGM*
Ga0182187_10655252	3300015341	Miscanthus Phyllosphere	VLDNEGDEDEDDIARLSDLIALAEVGLHVKKNEDDTGSLSKFIALA
Ga0182187_11206951	3300015341	Miscanthus Phyllosphere	VLSDEGDEDEDDTARLSDLIALAEAGLQAEEAKDDTGRLSELIALA*
Ga0182155_11014871	3300015343	Miscanthus Phyllosphere	VEEAEDDTSRLSELIALAEAGLQAEEAEDDTGRLSKLITLAEAGL*
Ga0182155_11541092	3300015343	Miscanthus Phyllosphere	VLADDRDENEDSTAQLSDLIALTEVGLQAKEDEDDTGRLRELIALAEAGL*
Ga0182189_10221162	3300015344	Miscanthus Phyllosphere	AEAGLQAEKAEDDIGRLSELIGLAEAGLQAQEAEDDTERLSELIALAEAGL*
Ga0182189_10442732	3300015344	Miscanthus Phyllosphere	VLCDDGDEDEDDTGRLSELIALAEAGIQTQEAEDDTGRLSKLISLAEAGIQA*
Ga0182111_12250211	3300015345	Miscanthus Phyllosphere	VLSDEGDEDEGDTARLSDLIALAEVSLQAKEDEDDTGGLSELIALAEVGL*
Ga0182139_10526782	3300015346	Miscanthus Phyllosphere	DTGRLSELIALAEVGLQAEEAKDDTGRLSELIALAEAGL*
Ga0182139_11279852	3300015346	Miscanthus Phyllosphere	LSDFIALAEAGLQAEEAKDDTGRLSKLIALAEAGL*
Ga0182177_10382491	3300015347	Miscanthus Phyllosphere	EDEDETARLSDLIALAEARLQVEKDEDDTGRLSELIALA*
Ga0182177_10850951	3300015347	Miscanthus Phyllosphere	VLSDEGDEDEDDTARWSDLIALAETGLQAEDAEDDIARLSELIALAE
Ga0182177_11896622	3300015347	Miscanthus Phyllosphere	MRGGEDEDNIGRLSELIALAEAGLQAEEAEDDTGRLRGLITLAEVGLHVEKAKDDT
Ga0182177_12288872	3300015347	Miscanthus Phyllosphere	MLSNEGDEDEDDTGRLSELIVLAEAGLQAKEAEDDTGRLSELIALAEASL*
Ga0182161_11627772	3300015351	Miscanthus Phyllosphere	VVADDGDEDQDNTARLSDLIALAEVGLQAEEDEDDTGRLSELIALEEASL*
Ga0182161_12039552	3300015351	Miscanthus Phyllosphere	MLSDEGNEDEDDTATLSELIALAEVGLQADETEDDTGRLSELIALAEAGL*
Ga0182161_12368221	3300015351	Miscanthus Phyllosphere	DDTTRLSELIAIEEAGLQVEEAKDDTDRLSKLIALADAGL*
Ga0182161_12618982	3300015351	Miscanthus Phyllosphere	VLSDGGDEDEDGTAKLSDLIALAEAGLQVEETEDDTGRLSELIALAEAGLQA*
Ga0182161_12630181	3300015351	Miscanthus Phyllosphere	MLAYDGDEDEDDTARLSDLIALVEASLQVEEVEEDTSRLNEL
Ga0182159_12219042	3300015355	Miscanthus Phyllosphere	VLSDEGDEDEDDTTRLSELIALAEAGTQAQEAEDDTGRLNELIALAEAGMQA*
Ga0182159_13460371	3300015355	Miscanthus Phyllosphere	LFDEGDEDEDDTTRLSELIALAEAGLQTEEAEDDTGRLSELIALAEVGL*
Ga0182159_13464702	3300015355	Miscanthus Phyllosphere	DTGRLSQLIALAEAGLQTQEAEDDTGRLSELIALEEVGL*
Ga0182145_10770201	3300015361	Miscanthus Phyllosphere	MSDDGDEDEDDTAWLSDLIALAEAGLQAEEDEDDTGRLSKLITLAEV
Ga0182220_10990462	3300017407	Miscanthus Phyllosphere	VEDDTGRLSELIALVEVGLQAEEAEDDIGRLSELIALAEAGL
Ga0182220_11080411	3300017407	Miscanthus Phyllosphere	SRAGRTVQSPILLSDEGDEDEDDTGRLSELVALAEVGLQVLEAEDDTGRLSELIALAEVG
Ga0182220_11100041	3300017407	Miscanthus Phyllosphere	LQAEEVDDDTGRLSELIALAEVGLQAEEAEDDTGKLSELITLAEAGLQAEEDDNAF
Ga0182208_10529222	3300017411	Miscanthus Phyllosphere	LSDKEDEDEDDTVRLSVLIALAEAGLQVEEAEDDTGRLSELIALAEAGL
Ga0182208_10923911	3300017411	Miscanthus Phyllosphere	VEEAEDDTGRLSGLIALAEASLQAEEVEDDTGRLTKLIALAEVG
Ga0182208_11156711	3300017411	Miscanthus Phyllosphere	VLSDEGDEDKNDTARLSDLIALAEAGLHAEEADDDTGRLSELIALAEVGLQVKEA
Ga0182208_11184702	3300017411	Miscanthus Phyllosphere	LIVLSDEGDEDEDNTGRLSELIALAEAGLQAYEVEDDTGRLSELIALAEAGL
Ga0182222_10692802	3300017413	Miscanthus Phyllosphere	DDTARLSDLIALAEAGLQADEAEDDNSRLSELIALAKAGMQA
Ga0182230_10283281	3300017417	Miscanthus Phyllosphere	LQVKEDEDDTGRLSELIALAEVGLQAEEAEDDTGRLNELIALAEAGL
Ga0182230_10762362	3300017417	Miscanthus Phyllosphere	VLADDGDEDEDNTARLSDLIALAEAGLQAEEDEDDTSRLSELIA
Ga0182230_10768511	3300017417	Miscanthus Phyllosphere	VLSDEGDEDEDDTARLSNLIALAEAGLQAEEAEDDTGRLSELIALAEAGLQAEEDDDAFF
Ga0182219_10561191	3300017424	Miscanthus Phyllosphere	LTGGATARGNEDEDDTSRLSEFIALAEAGIQAQEAEDDTGRLSELIALAEVGL
Ga0182219_10653632	3300017424	Miscanthus Phyllosphere	VLSDEGDEDEDDTTRLSDLIALAEAGLQTKEAEDDTSRLSELITLAEVCL
Ga0182219_10847172	3300017424	Miscanthus Phyllosphere	MLAYDGDEDEDDTARLSDLIALVEVGLQVEEAEDDTGRLGELIAQADAGL
Ga0182219_11272102	3300017424	Miscanthus Phyllosphere	KKRAGRTVQSPIVLSDEGDEDEDDTARLSELIALAEAGLQAEEAEDDTGRLSELIALAEAGL
Ga0182219_11287401	3300017424	Miscanthus Phyllosphere	DEGDEDEDDTGRLSELIALAKAGLQAEEAEDDTGRLSELIALAEAGL
Ga0182219_11363821	3300017424	Miscanthus Phyllosphere	DEDEDDTGRLSELIALAEAGLQAKEDEDDTGRLSELIALVEVGL
Ga0182224_10958191	3300017425	Miscanthus Phyllosphere	VLSDEGDEDEDDTARLSELIALAEMGLQAEEAEDDTDRLSKLIALAEAGL
Ga0182224_11131132	3300017425	Miscanthus Phyllosphere	VLSDEGDEDENDTGRLSELIALAETGLQTQEADYDTDRLSELVALAEAGL
Ga0182190_10950862	3300017427	Miscanthus Phyllosphere	VEEAEDDIGRLSELIALAEVGLQAKEAKDDAGRLSELIAL
Ga0182190_11446521	3300017427	Miscanthus Phyllosphere	VEKDEDDTGRLSELIVLAEAGLQAQKAKDDTGRLSEPIALAEMG
Ga0182192_10981421	3300017430	Miscanthus Phyllosphere	EEAEDDTGRLSKLIALAEVSLRAEEAEDNSGRLSELIALAEADL
Ga0182192_11084271	3300017430	Miscanthus Phyllosphere	VLADDGDEDEDDTARLSDLIALVEAGLQAEEVDDDTGRLSELIALAEAGL
Ga0182206_10781981	3300017433	Miscanthus Phyllosphere	DEGDDDEDDTARLNDLIALAEVGLQAEDAEDDTGRLNELIALAKAGL
Ga0182206_11058161	3300017433	Miscanthus Phyllosphere	VLSDEGDEDEDGTARLSNLIALAEVDLQAKEAKDDPGRLSELIALAEVGL
Ga0182209_11218252	3300017436	Miscanthus Phyllosphere	VLSDEGDEDENDTTRLSDLIALAEAGLQAEEAEDDTGRLSELIALAEAGL
Ga0182233_10776391	3300017680	Miscanthus Phyllosphere	VLADDGGDEDEDDTTRLSDLIALVEVGLQAEEAEEDISRLSELI
Ga0182233_10787001	3300017680	Miscanthus Phyllosphere	GLQAEEAEDDTGRLNELIALAETGLQAEEAEDDTGRLSELIALTEVGL
Ga0182229_10209871	3300017682	Miscanthus Phyllosphere	IVLCDDGDEDEDDTGRLSELIALAEAGIQAQEAEDDTGRLSELIALAEVGIQA
Ga0182218_10380791	3300017683	Miscanthus Phyllosphere	VEEAKDDTGRLSELIALAEAGLQAEEAEDDTDRLSELIALAEMGL
Ga0182225_10695882	3300017684	Miscanthus Phyllosphere	VLSDEGDEDEDDTARLSDLIALAEVGLQVEEDEDNIGRLSELIALAEEVL
Ga0182205_10147491	3300017686	Miscanthus Phyllosphere	VLCDDGDEDEDDTGRLSELIALAEVGIQAQEADDDTGRLSELISLAEAGIQA
Ga0182223_10420731	3300017690	Miscanthus Phyllosphere	VLADDGDEDEDDTARLSDLIALVEAGLQVEEAEDDTGRLGEL
Ga0227318_104317302	3300021971	Food Waste	MATVELMEEEDDDTSRLSELIALAEAGLHEEEEDDMSRLSELIALAEAGLRAQE
Ga0207642_111467271	3300025899	Miscanthus Rhizosphere	VLCDDGDEDEDDTSRLSELIALAEAGIQAQEAEDDTVRLSELIALAEVG
Ga0207669_113349732	3300025937	Miscanthus Rhizosphere	LSDEGDEDEDDTGRLSELIALAEAGLQAEEAEDDTGRLSELIALAEVGL
Ga0209486_103798173	3300027886	Agricultural Soil	MATVELMEEEDDDTSRLSELIALAEAGLHEEEEDDMSRLSELIALAE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F088138

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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