Metagenome / Metatranscriptome Family F088044

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088044
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	68 residues
Representative Sequence	MSDQDEAARRMAFFEQLAREAAAAGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Number of Associated Samples	71
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.77 %
% of genes near scaffold ends (potentially truncated)	32.11 %
% of genes from short scaffolds (< 2000 bps)	78.90 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.064 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.367 % of family members)
Environment Ontology (ENVO)	Unclassified (57.798 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.294 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.53% β-sheet: 0.00% Coil/Unstructured: 73.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF12728	HTH_17	50.46
PF00589	Phage_integrase	6.42
PF04255	DUF433	2.75
PF13604	AAA_30	1.83
PF00400	WD40	1.83
PF04945	YHS	0.92
PF08751	TrwC	0.92
PF01048	PNP_UDP_1	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	2.75
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.92
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.92
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.82 %
Unclassified	root	N/A	20.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.06 %
Unclassified	root	N/A	20.18 %
Viruses	superkingdom	All Organisms → Viruses	2.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.06 %
Unclassified	root	N/A	20.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.75 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	69.72 %
Unclassified	root	N/A	20.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	69.72 %
Unclassified	root	N/A	20.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	66.06 %
Unclassified	root	N/A	20.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	50.46 %
Unclassified	root	N/A	20.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.75 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.83 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	49.54 %
Unclassified	root	N/A	20.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.75 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.83 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.92 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	49.54 %
Unclassified	root	N/A	20.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.75 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.83 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.92 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	49.54 %
Unclassified	root	N/A	20.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.75 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.83 %
Mesorhizobium sp. M2A.F.Ca.ET.067.02.1.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M2A.F.Ca.ET.067.02.1.1	0.92 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10548869	Not Available	672	Open in IMG/M
3300005332\|Ga0066388_100392479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2034	Open in IMG/M
3300005332\|Ga0066388_100421344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1978	Open in IMG/M
3300005332\|Ga0066388_102614772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	919	Open in IMG/M
3300005363\|Ga0008090_15833190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1126	Open in IMG/M
3300005713\|Ga0066905_101951041	Not Available	544	Open in IMG/M
3300005764\|Ga0066903_100122337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3622	Open in IMG/M
3300005764\|Ga0066903_100890812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1608	Open in IMG/M
3300005764\|Ga0066903_100997086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1530	Open in IMG/M
3300005764\|Ga0066903_102029019	Not Available	1105	Open in IMG/M
3300005764\|Ga0066903_102284738	Not Available	1044	Open in IMG/M
3300005764\|Ga0066903_104009152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	789	Open in IMG/M
3300005764\|Ga0066903_108077358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	539	Open in IMG/M
3300010047\|Ga0126382_10688011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	856	Open in IMG/M
3300010048\|Ga0126373_10158297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2160	Open in IMG/M
3300010048\|Ga0126373_11208311	Not Available	822	Open in IMG/M
3300010358\|Ga0126370_10249446	All Organisms → Viruses → Predicted Viral	1376	Open in IMG/M
3300010358\|Ga0126370_12190856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	544	Open in IMG/M
3300010358\|Ga0126370_12378918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	526	Open in IMG/M
3300010361\|Ga0126378_10205383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2048	Open in IMG/M
3300010361\|Ga0126378_11865964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	684	Open in IMG/M
3300010361\|Ga0126378_12024470	Not Available	656	Open in IMG/M
3300010366\|Ga0126379_11710265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	734	Open in IMG/M
3300010366\|Ga0126379_12936243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	570	Open in IMG/M
3300010376\|Ga0126381_100277638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2284	Open in IMG/M
3300010376\|Ga0126381_100863216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1302	Open in IMG/M
3300010398\|Ga0126383_10329979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1538	Open in IMG/M
3300010937\|Ga0137776_1681471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7882	Open in IMG/M
3300012971\|Ga0126369_10422403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1376	Open in IMG/M
3300012971\|Ga0126369_11841414	Not Available	694	Open in IMG/M
3300016270\|Ga0182036_10088863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2068	Open in IMG/M
3300016270\|Ga0182036_10695487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	822	Open in IMG/M
3300016319\|Ga0182033_10318009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1291	Open in IMG/M
3300016341\|Ga0182035_10230868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1483	Open in IMG/M
3300016341\|Ga0182035_11205940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	676	Open in IMG/M
3300016357\|Ga0182032_10799149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	797	Open in IMG/M
3300016357\|Ga0182032_11221368	Not Available	647	Open in IMG/M
3300016422\|Ga0182039_10352740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1236	Open in IMG/M
3300017959\|Ga0187779_10114318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1638	Open in IMG/M
3300017972\|Ga0187781_10833247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	670	Open in IMG/M
3300017974\|Ga0187777_10178782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1424	Open in IMG/M
3300018064\|Ga0187773_10928095	Not Available	565	Open in IMG/M
3300021560\|Ga0126371_10006996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	10071	Open in IMG/M
3300021560\|Ga0126371_10075069	All Organisms → cellular organisms → Bacteria	3300	Open in IMG/M
3300021560\|Ga0126371_10590038	Not Available	1260	Open in IMG/M
3300021560\|Ga0126371_10695720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1165	Open in IMG/M
3300025922\|Ga0207646_10469480	All Organisms → cellular organisms → Bacteria → Acidobacteria	1135	Open in IMG/M
3300027874\|Ga0209465_10170057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1085	Open in IMG/M
3300031543\|Ga0318516_10002036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8180	Open in IMG/M
3300031543\|Ga0318516_10003910	All Organisms → cellular organisms → Bacteria	6510	Open in IMG/M
3300031543\|Ga0318516_10162896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1282	Open in IMG/M
3300031543\|Ga0318516_10484663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	710	Open in IMG/M
3300031543\|Ga0318516_10696035	Not Available	577	Open in IMG/M
3300031543\|Ga0318516_10840038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	518	Open in IMG/M
3300031544\|Ga0318534_10029273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2993	Open in IMG/M
3300031544\|Ga0318534_10146949	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300031546\|Ga0318538_10021190	All Organisms → cellular organisms → Bacteria	2901	Open in IMG/M
3300031546\|Ga0318538_10148557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1237	Open in IMG/M
3300031546\|Ga0318538_10573943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	612	Open in IMG/M
3300031564\|Ga0318573_10664376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	560	Open in IMG/M
3300031640\|Ga0318555_10093677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1576	Open in IMG/M
3300031680\|Ga0318574_10850972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	534	Open in IMG/M
3300031719\|Ga0306917_10126939	All Organisms → Viruses → Predicted Viral	1866	Open in IMG/M
3300031719\|Ga0306917_10244159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1374	Open in IMG/M
3300031723\|Ga0318493_10219450	All Organisms → Viruses → Predicted Viral	1009	Open in IMG/M
3300031724\|Ga0318500_10464680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	634	Open in IMG/M
3300031736\|Ga0318501_10547312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	633	Open in IMG/M
3300031744\|Ga0306918_10913460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	684	Open in IMG/M
3300031748\|Ga0318492_10050651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. M2A.F.Ca.ET.067.02.1.1	1938	Open in IMG/M
3300031765\|Ga0318554_10538228	Not Available	660	Open in IMG/M
3300031770\|Ga0318521_10356661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	867	Open in IMG/M
3300031771\|Ga0318546_10725326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	699	Open in IMG/M
3300031777\|Ga0318543_10459841	Not Available	570	Open in IMG/M
3300031797\|Ga0318550_10068269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1631	Open in IMG/M
3300031799\|Ga0318565_10415267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	652	Open in IMG/M
3300031819\|Ga0318568_10530249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	734	Open in IMG/M
3300031821\|Ga0318567_10129090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1387	Open in IMG/M
3300031821\|Ga0318567_10450361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	730	Open in IMG/M
3300031831\|Ga0318564_10299065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	710	Open in IMG/M
3300031833\|Ga0310917_10040661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2805	Open in IMG/M
3300031846\|Ga0318512_10328622	Not Available	763	Open in IMG/M
3300031846\|Ga0318512_10454701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	647	Open in IMG/M
3300031880\|Ga0318544_10100822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1088	Open in IMG/M
3300031890\|Ga0306925_11923161	Not Available	561	Open in IMG/M
3300031890\|Ga0306925_12006425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	546	Open in IMG/M
3300031896\|Ga0318551_10204576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1093	Open in IMG/M
3300031912\|Ga0306921_12487316	Not Available	538	Open in IMG/M
3300031941\|Ga0310912_10052949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2859	Open in IMG/M
3300031941\|Ga0310912_10738682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	762	Open in IMG/M
3300031954\|Ga0306926_10856643	Not Available	1091	Open in IMG/M
3300032001\|Ga0306922_10436490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1400	Open in IMG/M
3300032001\|Ga0306922_12121442	Not Available	544	Open in IMG/M
3300032055\|Ga0318575_10072230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1630	Open in IMG/M
3300032059\|Ga0318533_10088722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2123	Open in IMG/M
3300032060\|Ga0318505_10463010	Not Available	599	Open in IMG/M
3300032067\|Ga0318524_10723095	Not Available	525	Open in IMG/M
3300032068\|Ga0318553_10002924	All Organisms → cellular organisms → Bacteria	6676	Open in IMG/M
3300032068\|Ga0318553_10354699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	768	Open in IMG/M
3300032091\|Ga0318577_10404323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	652	Open in IMG/M
3300032261\|Ga0306920_100972012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1238	Open in IMG/M
3300032770\|Ga0335085_10019990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9579	Open in IMG/M
3300032783\|Ga0335079_10135064	All Organisms → cellular organisms → Bacteria	2777	Open in IMG/M
3300032805\|Ga0335078_10003283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24129	Open in IMG/M
3300032805\|Ga0335078_12322675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	560	Open in IMG/M
3300032828\|Ga0335080_10216399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2103	Open in IMG/M
3300032892\|Ga0335081_12207071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	579	Open in IMG/M
3300033290\|Ga0318519_10714157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	613	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.08%
Aquatic	Environmental → Aquatic	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.08%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.06%
Loam	Environmental → Terrestrial → Soil → Loam	12.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.17%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	57.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.17%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.92%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.50%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.67%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.92%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_105488692	3300004633	Tropical Forest Soil	MDFEAIAREAAAINDQDECDDPDCACHQDTGDRAGDGAAEVTMTEVYADEISWGPPGGW*
Ga0066388_1003924793	3300005332	Tropical Forest Soil	MDFEAIAREAAAINDQDECDDPDCACHQDTGDRPGDGAAEVTMTEVYADETSWGLPGGW*
Ga0066388_1004213442	3300005332	Tropical Forest Soil	MSDQDEAARRMAFFQQLAREAAAAGAQDECDDPDCACHGNVGDRPGDGAAEVTMTEVYEDEPG*
Ga0066388_1026147722	3300005332	Tropical Forest Soil	MSDQDEAARRMAFFQQLARESAAPGAQDECDDPDCACHQDAGDRPGDGAAEVTMTEVYEDDPGWGRPSGW*
Ga0008090_158331903	3300005363	Tropical Rainforest Soil	MSDQDETARRMAFFEQLAREAAAAGVQDECDNPDCACHGDVGERPGDGAAEVTMTEVYEDEPGWGQPSGW*
Ga0066905_1019510412	3300005713	Tropical Forest Soil	MIDQNEAARRMAFFQQLAQEAAAAGVQDECDDPDCACHGDVGDRLGDGAAKVTMTEVYDDQTGWCHPSGW*
Ga0066903_1001223374	3300005764	Tropical Forest Soil	MSDQDETARRMAFFEQLAREAAAAGMQDECDNPDCACHRDVGVRPGDGAAEVTMTEVYEDEPGWGHPGGW*
Ga0066903_1008908122	3300005764	Tropical Forest Soil	MSDQDETARRIAFFEQLARAAAAAGVQDECDNADCACHRDVGERPGDGAAEVTMTEVYEDEPGWGQPSGW*
Ga0066903_1009970862	3300005764	Tropical Forest Soil	MLMSDQDEAARRMAFFQQLAREAAAAGVQDECDNPDCACHGDVGDRPGDGVAEVTMTEVCEDEPGWGRPCGR*
Ga0066903_1020290192	3300005764	Tropical Forest Soil	MDFEAIAREAAAINDQDECDDPECACHQDTGDRPGDGAAEVTMTEVYADETSWGLPGGW*
Ga0066903_1022847382	3300005764	Tropical Forest Soil	MSDQDEAARRMAFFQQLAREAAAAGVQDECDNPDCACHQEAGDRPGDGAAEVTMTVVYEDEPGWGRSGGW*
Ga0066903_1040091522	3300005764	Tropical Forest Soil	MRDQNEAARRMAFFQQLAREAEVAGAQDECDDPDCACHEDAGGRPGDGAAEVTMTEVYEDEPGWGRQGGR*
Ga0066903_1080773582	3300005764	Tropical Forest Soil	MTDQNEAARRMAFFRQLAQEAAAGVQDECDDPDCACHGDVGDRPGDGVAKVTMTEVYEDEPGWGQPRGW*
Ga0126382_106880111	3300010047	Tropical Forest Soil	MSDQDETARRMAFFEQQAREAAAAGVQDECDNPDCACHQEAGDRPGDGAAEVTMTEVYEDEPGWGRPGGW*
Ga0126373_101582974	3300010048	Tropical Forest Soil	MDFEAIAREAAAINDQDECDDPDCACHQDTGDRPGDGAAEVTMTEVYADEISWGPPGGW*
Ga0126373_112083111	3300010048	Tropical Forest Soil	MSDQDEAARRMAFFQQLAREAADAGVQDECDNPDCACHQEAGDRPGDGAAEVTMTEVYEDEPGWGHPSGW*
Ga0126370_102494463	3300010358	Tropical Forest Soil	MDFEAIAREAAAINDQDECDDPECACHQDTGDRPGDGAAEVTMTEVYADETS*
Ga0126370_121908561	3300010358	Tropical Forest Soil	LMSDQDEAARRMAFFQQLAREAADAGVQDECDNPDCACHQEAGDRPGDGAAEVTMTEVYEDEPGWGRPGGW*
Ga0126370_123789182	3300010358	Tropical Forest Soil	MSDQDETARRMAFFEQLAREAAAAGVHDECDNADCACHRDVGERPGDGAAEVTMTEVYEDEPGWGQPSGW*
Ga0126378_102053832	3300010361	Tropical Forest Soil	MTDQNEAARRMAFFEQLAREAAAAGVQDECDDPDCACHGDVGDRPGDGAAEITMTEVYEDEPGWGHPGGW*
Ga0126378_118659642	3300010361	Tropical Forest Soil	RAARKGSRELMIDQNEAARRMAFFQQLAQEAAAAGVQDECDDPDCACHGDVGDRLGDGAAKVTMTEVYDDQTGWCHPSGW*
Ga0126378_120244701	3300010361	Tropical Forest Soil	VDFNERLAREATAINDQDECDDPDCACHGDVADQRGDGAAEVTMTEVYEDEPGWGHPGGW
Ga0126379_117102651	3300010366	Tropical Forest Soil	MSDQYEAARRMAFFQQLAREAAAAGVQDECDDPDCACHGDVDDRPGDGAAEVTMTEVYEDEPGWGHPSGW*
Ga0126379_129362431	3300010366	Tropical Forest Soil	MSDQDEAARRMAFFQQLAREAAAAGAQDECDDPDCACRQDAGDRPGDGAAGVTMTEVYEKRTRMGPPLRLVKRRGRETSLGQRK*
Ga0126381_1002776382	3300010376	Tropical Forest Soil	MDFEAIAREAAAINDQDECDDPDCACHQNTGDRAGDGAAEVTMTEVYADEISWGLPGGW*
Ga0126381_1008632162	3300010376	Tropical Forest Soil	MIDQNEAARRMAFFQQLAQEAAAAGVQDECDDPDCACHGDVGDRLGAGAAKVTMTEVYDDQTGWCHPSGW*
Ga0126383_103299792	3300010398	Tropical Forest Soil	MSDQDETARRMAFFEQLAREAAAAGVQDECDNPDCACHRDVGERPGDGAAEVTMTEVYEDKPGWGQPSGW*
Ga0137776_16814715	3300010937	Sediment	MSDHDEAARRMAFFEQLAREAAAAGMQDECDNPDCACHGDTGERPGDGAAEVTMTEVYEDEPGWGHPSGW*
Ga0126369_104224032	3300012971	Tropical Forest Soil	MDFEAIAREAAAINDQDECDDPDCACHQDTGDRPGDGAAEVTMTEVYADEISWGLPGGW*
Ga0126369_118414142	3300012971	Tropical Forest Soil	MSDQDETARRMAFFEQLAREAAAAGVHDECDNADCACHRDVGKRPGDGAAEVTMTEVYEDEPGWGQ
Ga0182036_100888632	3300016270	Soil	MRDQNEAARRMAFFEQLARESAAGGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0182036_106954871	3300016270	Soil	EAARRMAFFEQLARESAAGGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0182033_103180091	3300016319	Soil	EAARRMAFFEQLAREAAAAGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0182035_102308682	3300016341	Soil	MRDQNEAARRMAFFEQLAREAAAAGVQDECDDPDCACHQDVGERPGDGAAEVTMTEVYEDEPGWGHPGGW
Ga0182035_112059401	3300016341	Soil	ARRMAFFEQLAREAAAAGVQDECDNPDCACHGDVGERPGDGAAEVTMTEVYEDEPGWGQPSGW
Ga0182032_107991492	3300016357	Soil	MSDQDEAARRMAFFEQLAREAAAAGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0182032_112213682	3300016357	Soil	MSDQDEAARRMAFFQQLAREAAAAGAQDECDNPDCACHQDVGERPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0182039_103527401	3300016422	Soil	DQNEAARRMAFFEQLAREAAAAGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0187779_101143182	3300017959	Tropical Peatland	MNDQGEAAHHMAFFQQLAREAAAAGAQDECDDPDCACHQDAGERPGDGAAEVTMTEVYEDEPGWDRTCGW
Ga0187781_108332472	3300017972	Tropical Peatland	MTDQNEAARRMAFFQQLAREAAAAGVQDECDDPDCACHGDVADQRGDGAAEVTMTEAYEDEPGWGHPGGW
Ga0187777_101787822	3300017974	Tropical Peatland	MTDQNEEARRMAFFEQLAREAAATGVQDECDDPDCTCHQDAGDRPGDGAAEVTMTEVYEDEPGWGHPSGLVTRHGRETSLGQSK
Ga0187773_109280952	3300018064	Tropical Peatland	MRDQNEAARRMAFFQQLEREAAAAGVQDECDDPDCACHQDAGERPGDGAAEVTMTEVYEDEPGCDRPCGW
Ga0126371_100069964	3300021560	Tropical Forest Soil	MSDQDEAARRMAFFQQLARESAAPGAQDECDDPDCACHQDAGDRPGDGAAEVTMTEVYEDDPGWGRPSGW
Ga0126371_100750692	3300021560	Tropical Forest Soil	MLMSDQDEAARRMAFFQQLAREAAAAGVQDECDNPDCACHGDVGDRPGDGVAEVTMTEVCEDEPGWGRPCGR
Ga0126371_105900382	3300021560	Tropical Forest Soil	MDFEAIAREAAAINDQDECDDPECACHQDTGDRPGDGAAEVTMTEVYADEISWGLPGGW
Ga0126371_106957202	3300021560	Tropical Forest Soil	MTDQNEVARRMAFFEQRVREAAAAGVQDECDDPDCACHGDVADQRGDGAAEVTMTEVYEDEPGWGHPGGW
Ga0207646_104694802	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSNQDDTARRMAFFERLAREAAAAGPQDKCDNPDCACHQDAGERPGDGAAEVTMTEVYEDDPGWGRPCDW
Ga0209465_101700573	3300027874	Tropical Forest Soil	MDFEAIAREAAAINDQDECDDPDCACHQDTGDRAGDGAAEVTMTEVYADEISWGPPGGW
Ga0318516_100020363	3300031543	Soil	MRDQNEAARRMAFFEQLAREAAAAGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0318516_100039103	3300031543	Soil	MRDQNEAARRMAFFQQLAREAEVAGAQDECDDPDCACHEDAGDRPGDGVAEVTMTEVYEDEPGSGRPGGR
Ga0318516_101628962	3300031543	Soil	MSDQDEAARRMAFFQQLAREAAAAGAQDECDDPDCACHQDTGDRPGDGAAEVTMTEVYADEP
Ga0318516_104846632	3300031543	Soil	MSDQDEAARRMAFFQQLAREAAAAGIQDECDDPDCACHGDDGDRPGDGAAEVTMTEVCEGEPGWGHPSGW
Ga0318516_106960351	3300031543	Soil	MSDQDETARRMAFFEQLAREAAAAGVQDECDNPDCACHGDVGERPGDGAAEVTMTEVYEDEPGWGQPSGW
Ga0318516_108400382	3300031543	Soil	KETALDFNERVAREAAAINDQDECDDPDCACHQDAGERPGDGAAEVTMTEVYKDEPAWDRTCGW
Ga0318534_100292733	3300031544	Soil	MTDQNEAARRMAFFEQLARESAAGGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0318534_101469494	3300031544	Soil	MSDQDEAARRMAFFQQLAREAAAAGVQDECDNPDCACHQEAGDRPGDGAAEVTMTEVYEVEPGWGHPGGW
Ga0318538_100211902	3300031546	Soil	MAFFEQLAREAAAAGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0318538_101485572	3300031546	Soil	MTDQNEAARRMAFFEQLARESAAGGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEVEPGWGHPGGW
Ga0318538_105739432	3300031546	Soil	AARRMAFFEQLAREAAAAGVQDECDDPDCACHQDVGERPGDGAAEVTMTEVYEDEPGWGHPGGW
Ga0318573_106643762	3300031564	Soil	ARRMASFEQLAREAAAAGVQDECDDPDCACHQDVGERPGDGAAEVTMTEVYEDEPGWGHPGGW
Ga0318555_100936771	3300031640	Soil	MRDQNEAARRMAFFQQLAREAEVAGAQDECDDPDCACHEDAGDRPGDGVAEVTMTEVYEDEPGSG
Ga0318574_108509721	3300031680	Soil	ELMTDQNEAARRMAFFQQLAQEAAAAGVQDECDDPDCACHGDVGDRPGDGAAKVTMTEVYDDQTGWCHPSGW
Ga0318572_102754362	3300031681	Soil	LDFNERVAREAAAINDQDECDDPDCACHQDAGERPGDGAAEVTMTEVYKDEPAWDRTCGW
Ga0306917_101269391	3300031719	Soil	MRDQNEAARRMAFFEQLAREAAAAGVQDECDDPDCACHGDVGDRPGDGAAKVTMTEVYDDQTGWCHPSGW
Ga0306917_102441591	3300031719	Soil	GSRELMSDQDETARRMAFFEQLAREAAAAGVQDECDNPDCACHGDVGERPGDGAAEVTMTEVYEDEPGWGQPSGW
Ga0318493_102194501	3300031723	Soil	VDFNERTAREAKAISDQDECDDPDCACHQDVGERPGDGAAEVTMTEVYEDEPGWGHPGGW
Ga0318500_104646801	3300031724	Soil	ALRRDRTDRRVRDVRQGGRGLMSDQDEAARRMAFFQQLAREAAAAGAQDECDDPDCACHQDTGDRPGDGAAEVTMTEVYADEP
Ga0318501_105473122	3300031736	Soil	LMTDQNEAARRMAFFEQLAREAAAAGVQDECDDPDCACHQDVGERPGDGAAEVTMTEVYEDEPGWGHPGGW
Ga0306918_109134601	3300031744	Soil	QNEAARRMAFFEQLAREAAAAGVQDECDDPDCACHQDVGERPGDGAAEVTMTEVYEDEPGWGHPGGW
Ga0318492_100506513	3300031748	Soil	MSDQDEAARRMAFFQQLAREAAAAGVQDECDNPDCACHQEAGDRPGDGAAEVTMTEVYEDEPGWGQPSGW
Ga0318554_105382281	3300031765	Soil	MSDQDEMARRMAFFEQLAREAAAAGVQDECDDPDCACRRDVGERPGDGAAEVTMTEVYEDEPGWSQPSGW
Ga0318521_103566612	3300031770	Soil	MAFFQQLAREAAAAGVQDECDNPDCACHQEAGDRPGDGAAEVTMTEVYEVEPGWGHPGGW
Ga0318546_107253262	3300031771	Soil	MSDQDETARRMAFFEQLAREAAAAGVQDECDNPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGQPSGW
Ga0318543_104598412	3300031777	Soil	MTDQNEAARRMAFFEQLAREAAAAGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0318550_100682692	3300031797	Soil	MTDQNEAARRMAFFEQLAREAAAGGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0318565_104152672	3300031799	Soil	MTDQNEAARRMAFFQQLAQEAAAAGVQDECDDPDCACHGDVGDRPGDGAAKVTMTEVYDDQTGWCHPSGW
Ga0318568_105302492	3300031819	Soil	MSDQDEAARRRAFFEQLAREAAAAGAQDECDNPDCACHQDVGERPGDGAAEVTMTEVYEDEPGWGHPGGW
Ga0318567_101290904	3300031821	Soil	MSDQDEAARRMAFFQQLAREAAAAGAQDECDDPDCACHQDTGDRPGDGAAEVTMTEVYADGP
Ga0318567_104503611	3300031821	Soil	DETARRMAFFEQLAREAAAAGVQDECDNPDCACHGDVGERPGDGAAEVTMTEVYEDEPGWGQPSGW
Ga0318564_102990653	3300031831	Soil	QNEAARRMAFFEQLARESAAGGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0310917_100406611	3300031833	Soil	MRDQDEAARRMAFFEQLAREAAAAGAQDECDNPDCACHQDVGERPGDGAAEVTMTEVYEDEPGWGHPGGW
Ga0318512_103286222	3300031846	Soil	MSDQDEAARRMAFFQQLAREAAAAGAQDECDNPDCACHRDAGDRPGDGAAEVTMTEVCEGEPGWGHPSGW
Ga0318512_104547011	3300031846	Soil	SRELMSDQDEAARRMAFFQQLAREAAVAGIQDECDDPDCACRRDVGERPGDGAAEVTMTEVYEDEPGWGQPSGW
Ga0318544_101008224	3300031880	Soil	HGSRELMRDQNEAARRMAFFEQLAREAAAAGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0306925_119231611	3300031890	Soil	MTDQNEAARRMAFFEQLAREAAAAGVQDECDDPDCACHQDVGERPGDGAAEVTMTEVYEDEPGWGHPGGW
Ga0306925_120064252	3300031890	Soil	RELMSDQDETARRMAFFEQLAREAAAAGVQDECDNPDCACHGDVGERPGDGAAEVTMTEVYEDEPGWGQPSGW
Ga0318551_102045764	3300031896	Soil	AARRMAFFQQLAREAAAAGVQDECDNPDCACHQEAGDRPGDGAAEVTMTEVYEVEPGWGHPGGW
Ga0306921_124873161	3300031912	Soil	MSDQDEAARRMAFFQQLAREAAAAGAQDECDDPDCACHQDTGDRPGDGAAEVTMTEVYAD
Ga0310912_100529492	3300031941	Soil	MSDQDETARRMAFFEQLAREAAAAGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0310912_107386822	3300031941	Soil	MSDQDETARRMAFFEQLAREAAAAGVQDQCDNPDCACHRDVGERPGDGAAEVTMTEVYEDEPGWSQPSGW
Ga0306926_108566433	3300031954	Soil	MSDQDEAARRMAFFQQLAREAAAAGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEVEPGWGHPGG
Ga0306922_104364901	3300032001	Soil	MTDQNEAARRMAFFEQLARESAAGGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEP
Ga0306922_121214422	3300032001	Soil	MSDQDEAARRMAFFQQLAREAAAAGIQDECDDPDCACHGDDGDRPGDGAAEVTMTEVCEGEPGW
Ga0318575_100722301	3300032055	Soil	DEAARRMAFFQQLAREAAAAGAQDECDDPDCACHQDTGDRPGDGAAEVTMTEVYADEP
Ga0318533_100887225	3300032059	Soil	KGSRELMTDQNEAARRMAFFEQLAREAAAAGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0318505_104630101	3300032060	Soil	MSDQDEAARRMAFFQQLAREAAAAGAQDECDNPGCACHRDAGDRPGDGAAEVTMTEVYEDEPG
Ga0318524_107230952	3300032067	Soil	MTDQNEAARRMAFFEQLAREAAAAGVQDECDDPDCACHQDVGERPGDGAAEVTMTEVYEDEPGWGHPGSS
Ga0318553_100029244	3300032068	Soil	MRDQNEAARRMAFFQQLAREAAAAGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0318553_103546991	3300032068	Soil	DQNEAARRMAFFEQLAREAAAAGVQDECDDPDCACHQDVGERPGDGAAEVTMTEVYEDEPGWGHPGGW
Ga0306924_115481673	3300032076	Soil	VAREAAAINDQDECDDPDCACHQDAGERPGDGAAEVTMTEIYDDEPGWDRACGS
Ga0318577_104043231	3300032091	Soil	EQLARESAAGGVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHPSGW
Ga0306920_1009720121	3300032261	Soil	MSDQDETARRMAFFEQLAREAAAAGVQDQCDNPDCACHRDVGERPGDGAAEVTMTEVYEDEPGWDQPGGW
Ga0335085_100199908	3300032770	Soil	MAFFQQLAREAVAAGVQDECDDPDCACHQDAVARPGDGAAEVTMTEVYEDEAGWGHPSGW
Ga0335079_101350642	3300032783	Soil	MRDQNEAARRMAFFQQLAREAAAAGVQDECDDPDCACHGDVSDRPGDGAAGVTMTEVYGDEPGWGRPCGR
Ga0335078_1000328326	3300032805	Soil	MSDQDEAARRMAFFQQLVREAAAADVQDECDDPDCACHGDVGDRPGDGAAEVTMTEVYEDEPGWGHHCDR
Ga0335078_123226752	3300032805	Soil	RAAHRVRAARKGSRELRRDQNEAARRMAFFQQLAREAAAAGVQDECDDADCACHGDVSDRPGDGAAGVTMTEVYGDEPGWGRPCGR
Ga0335080_102163995	3300032828	Soil	MSNRDEAARRMAFFQQLAREAVAAGVQDECDDPDCACHQDAVARPGDGAAEVTMTEVYEDEAGWGHPSGW
Ga0335081_122070712	3300032892	Soil	MRDQNEAARRMAFFQQLAREAAAAGVQDECDDADCACHGDVSDRPGDGAAGVTMTEVYGDEPGWGRPCGR
Ga0318519_107141572	3300033290	Soil	AFFQQLAREAAAAGIQDECDDPDCACHGDDGDRPGDGAAEVTMTEVCEGEPGWGHPSGW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088044

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences