Metagenome / Metatranscriptome Family F088042

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088042
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	70 residues
Representative Sequence	MKRLLRVALTVSLTALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRL
Number of Associated Samples	81
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.46 %
% of genes near scaffold ends (potentially truncated)	94.50 %
% of genes from short scaffolds (< 2000 bps)	91.74 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.046 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (63.303 % of family members)
Environment Ontology (ENVO)	Unclassified (75.229 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (64.220 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 21.05% β-sheet: 0.00% Coil/Unstructured: 78.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF05345	He_PIG	5.50
PF00082	Peptidase_S8	2.75
PF11854	MtrB_PioB	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.05 %
Unclassified	root	N/A	44.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.05 %
Unclassified	root	N/A	44.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.05 %
Unclassified	root	N/A	44.95 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.05 %
Unclassified	root	N/A	44.95 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	54.13 %
Unclassified	root	N/A	44.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	53.21 %
Unclassified	root	N/A	44.95 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.92 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	53.21 %
Unclassified	root	N/A	44.95 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.92 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.92 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	53.21 %
Unclassified	root	N/A	44.95 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.92 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101868893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1899	Open in IMG/M
3300004479\|Ga0062595_101357141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	644	Open in IMG/M
3300005363\|Ga0008090_10203178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1024	Open in IMG/M
3300005363\|Ga0008090_10203743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	562	Open in IMG/M
3300005435\|Ga0070714_101757222	Not Available	606	Open in IMG/M
3300005437\|Ga0070710_10874010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	647	Open in IMG/M
3300005542\|Ga0070732_10053879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2327	Open in IMG/M
3300005764\|Ga0066903_104456103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	747	Open in IMG/M
3300005764\|Ga0066903_106736091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	597	Open in IMG/M
3300010048\|Ga0126373_11058144	Not Available	877	Open in IMG/M
3300010360\|Ga0126372_10252443	Not Available	1514	Open in IMG/M
3300010361\|Ga0126378_12600607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	578	Open in IMG/M
3300010366\|Ga0126379_13888215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	500	Open in IMG/M
3300010376\|Ga0126381_101104595	Not Available	1145	Open in IMG/M
3300016341\|Ga0182035_10614357	Not Available	940	Open in IMG/M
3300016387\|Ga0182040_10442853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1028	Open in IMG/M
3300016387\|Ga0182040_10667922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	847	Open in IMG/M
3300016404\|Ga0182037_11923567	Not Available	530	Open in IMG/M
3300016445\|Ga0182038_10382028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1176	Open in IMG/M
3300017937\|Ga0187809_10045056	Not Available	1419	Open in IMG/M
3300018058\|Ga0187766_10324733	Not Available	1002	Open in IMG/M
3300020581\|Ga0210399_10745886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	802	Open in IMG/M
3300021361\|Ga0213872_10236279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	774	Open in IMG/M
3300021361\|Ga0213872_10354335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	602	Open in IMG/M
3300021441\|Ga0213871_10292429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	524	Open in IMG/M
3300025905\|Ga0207685_10112751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	1181	Open in IMG/M
3300026078\|Ga0207702_12373574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	518	Open in IMG/M
3300027014\|Ga0207815_1014541	Not Available	992	Open in IMG/M
3300027874\|Ga0209465_10067726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1727	Open in IMG/M
3300031543\|Ga0318516_10173441	Not Available	1241	Open in IMG/M
3300031543\|Ga0318516_10462177	Not Available	729	Open in IMG/M
3300031543\|Ga0318516_10673404	Not Available	588	Open in IMG/M
3300031544\|Ga0318534_10298272	Not Available	928	Open in IMG/M
3300031544\|Ga0318534_10391571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	798	Open in IMG/M
3300031546\|Ga0318538_10131904	Not Available	1311	Open in IMG/M
3300031546\|Ga0318538_10258152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	936	Open in IMG/M
3300031546\|Ga0318538_10386213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	757	Open in IMG/M
3300031561\|Ga0318528_10140359	Not Available	1284	Open in IMG/M
3300031561\|Ga0318528_10157501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1210	Open in IMG/M
3300031572\|Ga0318515_10245807	Not Available	959	Open in IMG/M
3300031572\|Ga0318515_10620047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	574	Open in IMG/M
3300031573\|Ga0310915_10430860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	937	Open in IMG/M
3300031640\|Ga0318555_10681390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	556	Open in IMG/M
3300031679\|Ga0318561_10026855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2743	Open in IMG/M
3300031680\|Ga0318574_10221830	Not Available	1089	Open in IMG/M
3300031680\|Ga0318574_10279927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	968	Open in IMG/M
3300031681\|Ga0318572_10162066	Not Available	1296	Open in IMG/M
3300031681\|Ga0318572_10676412	Not Available	614	Open in IMG/M
3300031713\|Ga0318496_10134906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1341	Open in IMG/M
3300031736\|Ga0318501_10343950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	801	Open in IMG/M
3300031744\|Ga0306918_10200414	Not Available	1504	Open in IMG/M
3300031744\|Ga0306918_11485884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	518	Open in IMG/M
3300031748\|Ga0318492_10771267	Not Available	517	Open in IMG/M
3300031751\|Ga0318494_10011026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4281	Open in IMG/M
3300031751\|Ga0318494_10474514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	728	Open in IMG/M
3300031754\|Ga0307475_10191765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1632	Open in IMG/M
3300031763\|Ga0318537_10130904	Not Available	933	Open in IMG/M
3300031763\|Ga0318537_10156382	Not Available	849	Open in IMG/M
3300031765\|Ga0318554_10723348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	558	Open in IMG/M
3300031768\|Ga0318509_10160347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1243	Open in IMG/M
3300031771\|Ga0318546_10211109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1328	Open in IMG/M
3300031771\|Ga0318546_10212387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1324	Open in IMG/M
3300031778\|Ga0318498_10279229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	751	Open in IMG/M
3300031779\|Ga0318566_10116595	Not Available	1316	Open in IMG/M
3300031779\|Ga0318566_10126204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1263	Open in IMG/M
3300031780\|Ga0318508_1210550	Not Available	557	Open in IMG/M
3300031782\|Ga0318552_10147629	Not Available	1180	Open in IMG/M
3300031793\|Ga0318548_10106635	Not Available	1345	Open in IMG/M
3300031793\|Ga0318548_10459125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	623	Open in IMG/M
3300031796\|Ga0318576_10188450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	969	Open in IMG/M
3300031831\|Ga0318564_10061827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1642	Open in IMG/M
3300031833\|Ga0310917_10148511	Not Available	1545	Open in IMG/M
3300031845\|Ga0318511_10315301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	708	Open in IMG/M
3300031846\|Ga0318512_10117201	Not Available	1264	Open in IMG/M
3300031880\|Ga0318544_10096192	Not Available	1113	Open in IMG/M
3300031896\|Ga0318551_10148924	Not Available	1276	Open in IMG/M
3300031896\|Ga0318551_10680577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	595	Open in IMG/M
3300031910\|Ga0306923_12315583	Not Available	535	Open in IMG/M
3300031912\|Ga0306921_10206041	Not Available	2304	Open in IMG/M
3300031941\|Ga0310912_10724562	Not Available	770	Open in IMG/M
3300031945\|Ga0310913_10569859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	803	Open in IMG/M
3300031947\|Ga0310909_10356179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1228	Open in IMG/M
3300031947\|Ga0310909_10519083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	998	Open in IMG/M
3300031954\|Ga0306926_10394926	Not Available	1707	Open in IMG/M
3300031954\|Ga0306926_11637270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	737	Open in IMG/M
3300032001\|Ga0306922_10633592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1130	Open in IMG/M
3300032008\|Ga0318562_10605989	Not Available	632	Open in IMG/M
3300032008\|Ga0318562_10751590	Not Available	559	Open in IMG/M
3300032009\|Ga0318563_10112344	Not Available	1446	Open in IMG/M
3300032035\|Ga0310911_10899400	Not Available	511	Open in IMG/M
3300032039\|Ga0318559_10182104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	962	Open in IMG/M
3300032044\|Ga0318558_10245443	Not Available	880	Open in IMG/M
3300032052\|Ga0318506_10345777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	659	Open in IMG/M
3300032055\|Ga0318575_10129541	Not Available	1243	Open in IMG/M
3300032066\|Ga0318514_10111976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1393	Open in IMG/M
3300032067\|Ga0318524_10646262	Not Available	557	Open in IMG/M
3300032090\|Ga0318518_10117426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1338	Open in IMG/M
3300032091\|Ga0318577_10126668	Not Available	1208	Open in IMG/M
3300032091\|Ga0318577_10544170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	553	Open in IMG/M
3300032770\|Ga0335085_11083335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	860	Open in IMG/M
3300033289\|Ga0310914_10531034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1063	Open in IMG/M
3300033289\|Ga0310914_11380860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	607	Open in IMG/M
3300033290\|Ga0318519_10189094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1170	Open in IMG/M
3300033290\|Ga0318519_10994823	Not Available	520	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.33%
Host-Associated	Host-Associated	3.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.41%
Plants	Host-Associated → Plants	3.67%
Aquatic	Environmental → Aquatic	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.75%
Freshwater	Environmental → Aquatic → Freshwater	0.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.24%
Loam	Environmental → Terrestrial → Soil → Loam	7.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.83%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	77.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.75%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.83%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	63.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.75%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.83%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1018688931	3300000364	Soil	MVSMTLLTVAGCAPYVRSDVNTALLSQVHCGSFAWAGEFRSNSPLRSTIANPLNESRLRAAIAS
Ga0062595_1013571411	3300004479	Soil	MKPVVCAALAVLLTAVTLAACAPYVRSDVNTALISQVHCGSFAWAGAFRSSSPLRSTIANPVNESRLRTAIASRLGGP
Ga0008090_102031782	3300005363	Tropical Rainforest Soil	MKRLMCVAFTVSLTALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIASHLG
Ga0008090_102037432	3300005363	Tropical Rainforest Soil	MKRLLRAALTVSLTALTLSACAPYVRSDVNTAAISRVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIASHLG
Ga0070714_1017572221	3300005435	Agricultural Soil	MKRLLYSVLGMSMCAFLIAACAPNVRSDVNTALISQVRCGSFAWAGEFRSNSALRSTIANPLNE
Ga0070713_1006235522	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKRPLYFLPGMSMCALLLAACAPYVRSDVNTALISQVRCGSFAWAGEFRSNSALRSTIANPLNES
Ga0070710_108740102	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKPVTCAVIVGWLAALTLAACAPYVRSDVNTSLIGQVHCGSFAWAGAFRSSSPLRSTIANPVNEDRLRTAIASHLGSPIQPGPGNADCLV
Ga0070732_100538793	3300005542	Surface Soil	MKRLLYAGLTVLLTALTLSACAPYVKSDVNTALISRVHCGSFAWAGEFRSSSPLRGGIANPV
Ga0066903_1044561031	3300005764	Tropical Forest Soil	MKRLLRAALTVSLTALTLSACGPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLR
Ga0066903_1067360911	3300005764	Tropical Forest Soil	MKRLLSAALTLSLSALILSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRTAIAS
Ga0126373_110581442	3300010048	Tropical Forest Soil	MRRLLPAALLSSALAVTLAGCAPYVRSDVNTALVGRVHCGSFAWAGEFRSNSPLRSTIANPV
Ga0126372_102524433	3300010360	Tropical Forest Soil	MKRLLYSFLGVSMCALLVAACAPYVRSDVNTALISQVRCGSFAWAGEFRSNSALRSTIANPLNESRLR
Ga0126378_126006072	3300010361	Tropical Forest Soil	MKRLLRAALTTSLTALMLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRSAIAS
Ga0126379_138882152	3300010366	Tropical Forest Soil	MKRLLRAALTISVTALTLSACGPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIAS
Ga0126381_1011045952	3300010376	Tropical Forest Soil	MKHLLRAALSVSLTAVILSACAPYVRSDVNNAAISHVHCGTFAWAGEFRSNSPLRSTIA
Ga0182035_101469461	3300016341	Soil	MKRLLYSLLGVSLVTLLVAACAPYVRSDVNTALIGQVRCASFAWAGEFRSNSALRSSIANPVNESRLRAAIAAHLGGMVQPAPGNADCLI
Ga0182035_106143572	3300016341	Soil	MKRLSHVALTVALTAVTLAACAPYVRSDVNTAAISRVHCGTFAWAGEFRSN
Ga0182040_104428531	3300016387	Soil	MKRLLRAALTVSLTALTLSACGPYVRSDVNTAAISHVHCGTFAWVGEFRSNSPLRSTIANPVNESRLRAAIASHLGGVIQPAPG
Ga0182040_106679222	3300016387	Soil	VELRPVLEGSKRMKRLLPLAVTVSFAAVTLVACAPYVKSDVNTALVGRVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIAAHL
Ga0182037_119235672	3300016404	Soil	MKRLLRAALTVSLTALTLSACGPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIA
Ga0182038_103820282	3300016445	Soil	VLEGSKRMKRLLPLAVTVSFAAVTLVACAPYVKSDVNTALVGRVHCGTFAWAGEFRSNSPLRSTI
Ga0187809_100450563	3300017937	Freshwater Sediment	MKRLLPVALAVSLTALTLPACGPYVRSDVNAAAISRVRCGTFAWAGEFRSNS
Ga0187766_103247332	3300018058	Tropical Peatland	MKRLLHVALTAVLTAVTLAACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRL
Ga0210399_107458862	3300020581	Soil	MKRVLCAAVTLSMSLLAVAACAPYVRSDVNTALIGQVHCGSFAWAGEFRSNSALRSTIASPLNESRLRAAIAAHLGGRIQ
Ga0213872_102362791	3300021361	Rhizosphere	MKRLSYAVSIVSLAASLLSACGPYVKSDVNGALIGQVHCGTFAWAGEFRSTSPLRSTIANPLNESRLRAAIASHLGGIIQP
Ga0213872_103543351	3300021361	Rhizosphere	MKRVLYAVLTAALGASTLVACAPYVRSDVNTNLIGQVRCGSFAWAGEFRSSSPLRSTVANPLNEGRLRAAIAYHLGAVV
Ga0213871_102924292	3300021441	Rhizosphere	MKRLSYAVSIVSLAASLLSACGPYVKSDVNGALIGQVHCGTFAWAGEFRSTSPLRSTIANPLNESRLRAAIASHLGGIIQPAPGGADCLVGYGI
Ga0207685_101127512	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKRLLYSLPGMSMCALLLAACAPYVRSDVNTALISQVRCGSFAWAGEFRSNSALRSTIANPLNESRL
Ga0207702_123735742	3300026078	Corn Rhizosphere	MKRLLYSLPGMSMCALLLAACAPYVRSDVNTALISQVRCGSFAWAGEFRSNSALRSTIANPLNESRLRAAISAHLGGPVQAAAGNAD
Ga0207815_10145412	3300027014	Tropical Forest Soil	MKRLSRAALTASLTALTLSACGPYVRSDVNAAAISRVHCGTFAWAGEFRS
Ga0209465_100677262	3300027874	Tropical Forest Soil	MKRLLPAALTLSLTALLLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNEGRLRSAIASHLVAASA
Ga0318516_101734411	3300031543	Soil	MKRLLRAALTISVTALTLSACGPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIAN
Ga0318516_104621772	3300031543	Soil	MKRLLRAALTVSLSALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIAN
Ga0318516_106734042	3300031543	Soil	MKRLLRAALTVSLTALTLSACGPYVRSDVNTAAISHVHCGTFAWAGEFRSNSP
Ga0318534_102982722	3300031544	Soil	MKRLLRVALTVSLTALTLSACSPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIA
Ga0318534_103915711	3300031544	Soil	MKRLLRAALTVSLTALTLSACGPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIASHLGGVIQPAPGN
Ga0318538_101319041	3300031546	Soil	MKRLLRVALTVSLTALTLSACTPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRL
Ga0318538_102581522	3300031546	Soil	MKRLLRAALTVSLSALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRA
Ga0318538_103862131	3300031546	Soil	MKRLLPLAVTVSFAAVTIVACAPYVKSDVNTALVGRVHCGTFAWAGEFRSNSPLRSTIANPVNESRLR
Ga0318528_101403591	3300031561	Soil	MKRLLRVALTVSLTALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRL
Ga0318528_101575012	3300031561	Soil	MKQLLYAALTVSLTALTLSACGPYVKSDVNTALISRVHCGSFAWAGGFRNSSPLRSTIANPVNESRLRAAIAAHLGGPIQPAPG
Ga0318515_102458071	3300031572	Soil	MKRLLRVALTVSLTALTLSACTPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTI
Ga0318515_106200471	3300031572	Soil	MKRLLHAALTVSLTALTLSACAPYVRSDVNTAAVSRVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRTAIASHLG
Ga0310915_104308601	3300031573	Soil	MKRLLRAALTVSLTALTLSACGPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIASHLG
Ga0318555_106813902	3300031640	Soil	MKRLLHAALTVSLTALTLSACAPYVRSDVNTAAVSRVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRTAIASHLGGVIQPAPGNADCLVGYG
Ga0318561_100268553	3300031679	Soil	MKRLLRAALTISVTALTLSACGPYVRSDVNTAAISHVHCGTFAWAGEFRSN
Ga0318574_102218301	3300031680	Soil	MKRLLRVALTVSLTALTLSACSPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTI
Ga0318574_102799272	3300031680	Soil	VELRPVLEGSKRMKRLLPLAVTVSFAAVTLVACAPYVKSDVNTALVGRVHCGTFAWAGEFRSNSPLRSTIANPVNESRLR
Ga0318572_101620662	3300031681	Soil	MKRLLYSLLGVSLVALLVAACAPYVRSDVNTALIGQVRCASFAWAGEFRSNSALRSSIANPVNESRLRAAIAAHLGGIVQPA
Ga0318572_106764122	3300031681	Soil	MKHLLLAAVTVSLTTLSLSACAPYVRSDVNSAAISRVHCGTFAWAGEFRSNSPLRSTIANPVN
Ga0318496_101349063	3300031713	Soil	VELRPVLEGSKRMKRLLPLAVTVSFAAVTLVACAPYVKSDVNTALVGRVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIAAH
Ga0318501_103439501	3300031736	Soil	MKRLLRVALTVSLTALTLSACTPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIASHLGGMV
Ga0306918_102004141	3300031744	Soil	MKRLLYSLLGVSLVTLLVAACAPYVRSDVNTALIGQVRCASFAWAGEFRSNSALRSSIANPVNESRLRAA
Ga0306918_114858842	3300031744	Soil	MKRLLRAALTVSLTALTLSACGPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRA
Ga0318492_107712672	3300031748	Soil	MKRLLRAALTVSLSALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNS
Ga0318494_100110261	3300031751	Soil	VELRPVLEGSKRMKRLLPLAVTVSFAAVTLVACAPYVKSDVNTALVGRVHCGTFAWAGEFRSNSPLRSTIA
Ga0318494_104745142	3300031751	Soil	MKRLLRVALTVSLSALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIASH
Ga0307475_101917653	3300031754	Hardwood Forest Soil	MKRLLYAALTVSMSLLAVAACAPYVRSDVNTALVSQVHCVSFAWAGEFRSNSPLRSTIANPLNESRLRAAIASHLGGRVQPEPGN
Ga0318537_101309041	3300031763	Soil	MKRLLRATFTVSLTALVLSACAPYVRSDVNTAAISRVHCGTFAWAGEFRSNSPLRSTIAN
Ga0318537_101563822	3300031763	Soil	MKRLLRVALTVSLSALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTI
Ga0318554_101708482	3300031765	Soil	MKRLLRAALTVSLTALTLSACGPYVRSDVNTAAISHVHCGTFAWAGKF
Ga0318554_107233481	3300031765	Soil	MKRLWLTALTASLTTLSGCAPYVRSDVNTALIGRVHCGSFAWAGEFRSSNPLRSTIANPVNESRLRAAIAAHLGVPIQPVPGNADCLVGY
Ga0318509_101603471	3300031768	Soil	VELRPVLEGSKRMKRLLPLAVTVSFAAVTLVACAPYVKSDVNTALVGRVHCGTFAWAGEFRSNSPLRST
Ga0318546_102111092	3300031771	Soil	MKRLLRVALTVSLTALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIASHLGGMVQPAPGSAD
Ga0318546_102123872	3300031771	Soil	MKRLLRAALTVSLTALTLSACGPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIASHLGGVIQPAPGNADCLVGYGI
Ga0318498_102792291	3300031778	Soil	MKQLLYAALTVSLTALTLSACGPYVKSDVNTALISRVHCGSFAWAGGFRNSSPLRSTIANPVNESRLRAAIAAHLG
Ga0318566_101165952	3300031779	Soil	MKRLLYSLLGVSLVALLVAACAPYVRSDVNTALIGQVRCASFAWAGEFRSNSALRSSIANPVNESRLRAAIAAHLGGIVQPAPG
Ga0318566_101262041	3300031779	Soil	MKRLLRVALTVSLSALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIASHLGGMV
Ga0318508_12105501	3300031780	Soil	MKRLLRAALTISVTALTLSACGPYVRSDVNTAAISHVHCGTFAWAGEFRSSSPLRS
Ga0318552_101476292	3300031782	Soil	MKRLLRVALTVSLSALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNES
Ga0318548_101066353	3300031793	Soil	MKRLLYSLLGVSLVALLVAACAPYVRSDVNTALIGQVRCASFAWAGEFRSNSALRSSIANPVNESRLRAAIAAHLGGMVQP
Ga0318548_104591251	3300031793	Soil	MKQLLYAALTVSLTALTLSACGPYVKSDVNTALISRVHCGSFAWAGGFRNSSPLRSTIANPVNESRLRAA
Ga0318576_101884502	3300031796	Soil	MKRLLSAALTTSVTALLCACGPYVRSDVNTAAISHVHCGTFAWAGEFRSSSPLRSTIANPVNESRLRAAIA
Ga0318523_101572172	3300031798	Soil	VLEGSKRMKRLLPLAVTVSFAAVTLVACAPYVKSDVNTALVGRVHCGTFAWAGEFRS
Ga0318564_100618271	3300031831	Soil	MKRLLRAALTISVTALTLSACGPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIASHLGGVVQPA
Ga0310917_101485111	3300031833	Soil	MKRLLYSLLGVSLVTLLVAACAPYVRSDVNTALIGQVRCASFAWAGEFRSNSALRSSIANPVNESRLRAAIAAHLGGIVQPAP
Ga0318511_103153012	3300031845	Soil	VELRPVLEGSKRMKRLLPLAVTVSFAAVTLVACAPYVKSDVNTALVGRVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIAAHE
Ga0318512_101172012	3300031846	Soil	MKHLLLAAVTVSLTTLSLSACAPYVRSDVNSAAISRVHCGTFAWAGEFRSNSPLRSTIAN
Ga0318544_100961921	3300031880	Soil	MKRLLRVALTVSLSALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNS
Ga0306925_112154332	3300031890	Soil	MKRLLRAALTVSLSALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEF
Ga0318551_101489242	3300031896	Soil	MKQLLYAALTVSLTALTLSACGPYVKSDVNTALISRVHCGSFAWAGGFRNSSPLRSTIA
Ga0318551_106805771	3300031896	Soil	MKRLLRAALTVSLSALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIASHLGGMVQPAPGSADCLVGYG
Ga0306923_123155831	3300031910	Soil	MKCVLRAALTVSLSALTLNACAPYVHSDVNTAAIGRVHCGSFAWAGEFRSNSPLRSTIANPV
Ga0306921_102060413	3300031912	Soil	MKRLLRVALTVSLTALTLSACTPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIAN
Ga0310912_107245622	3300031941	Soil	MKRLLRVALTVSLTALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSP
Ga0310913_105698591	3300031945	Soil	MKRLLRVALTVSLTALTLSACTPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIASHLGGMVQPAPGSADCLVGYGI
Ga0310909_103561792	3300031947	Soil	MKHLLLAAVTVSLTTLSLSACAPYVRSDVNSAAISRVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIASHLGGVI
Ga0310909_105190832	3300031947	Soil	VLEGSKRMKRLLPLAVTVSFAAVTLVACAPYVKSDVNTALVGRVHCGTFAWAGEFRSNSPLRSTIAN
Ga0306926_103949261	3300031954	Soil	MKRLLRAALTVSLSALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNE
Ga0306926_116372701	3300031954	Soil	MKRLLSAALTTSVTALLCACGPYVRSDVNTAAISHVHCGTFAWAGEFRSSSPLRSTIANPVNESRLRAAIASH
Ga0306922_106335922	3300032001	Soil	MKRLLPLAVTVSFAAVTIVACAPYVKSDVNTALVGRVHCGTFAWAGEFRSNSPLRSTIANPVNESR
Ga0318562_106059891	3300032008	Soil	MKRLLYSLLGVSLVALLVAACAPYVRSDVNTALIGQVRCASFAWAGEFRSNSALRSSIANPVNESRLRAAIAAHLGG
Ga0318562_107515901	3300032008	Soil	MKRLLSAALTTSVTALLCACGPYVRSDVNTAAISHVHCGTFAWAGEFRSSSPLRS
Ga0318563_101123443	3300032009	Soil	MKRLLYSLLGVSLVALLVAACAPYVRSDVNTALIGQVRCASFAWAGEFRSNSALRSSIANPVNESRLRAAIAAHLGGMVQPA
Ga0310911_108994002	3300032035	Soil	MKRLLRVALTVSLTALTLSACSPYVRSDVNTAAISHVHCGTFAWAGEFRSNS
Ga0318559_101821042	3300032039	Soil	MKRLLPLAVTVSFAAVTIVACAPYVKSDVNTALVGRVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIAAHLGGRIQPGPGNADCLV
Ga0318558_102454431	3300032044	Soil	MKRLLRAALTVSLTALTLSACGPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNES
Ga0318506_103457772	3300032052	Soil	MKCVLRAALTVSLSALTLNACAPYVHSDVNTAAISRVHCGSFAWAGEFRSNSPLRSTIANPVNESRLRAAIASHLGAPIQPAPGNA
Ga0318575_101295411	3300032055	Soil	MKRLLRATFTVSLIALVLSACAPYVRSDVNTAAISRVHCGTFAWAGEFRSNSPLRSTIAN
Ga0318514_101119762	3300032066	Soil	MKRLLRVALTVSLSALTLSACAPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIASHLGGMVQPAPGSADC
Ga0318524_106462621	3300032067	Soil	MKRLLHAALTVSLTALTLSACAPYVRSDVNTAAVSRVHCGTFAWAGEFRSNSPLRSTI
Ga0318518_101174262	3300032090	Soil	MKRLLRVALTVSLTALTLSACSPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIASHLGGMVQPAP
Ga0318577_101266682	3300032091	Soil	MKRLLRAALTVSLTALTLSACGPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRS
Ga0318577_105441701	3300032091	Soil	MKRLLRVALTVSLTALTLSACTPYVRSDVNTAAISHVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRA
Ga0335085_110833352	3300032770	Soil	MKPVMCAVIVGWLAALTLAACAPYVRSDVNTALIGQVHCGSFAWAGTFRSSSPLRSTIANPVNENRL
Ga0310914_105310341	3300033289	Soil	VLEGSKRMKRLLPLAVTVSFAAVTLVACAPYVKSDVNTALVGRVHCGTFAWAGEFRSNSPLRSTIA
Ga0310914_113808602	3300033289	Soil	MKRLLPLAVTVSFAAVTIVACAPYVKSDVNTALVGRVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIAAHLGGR
Ga0318519_101890942	3300033290	Soil	VELRPVLEGSKRMKRLLPLAVTVSFAAVTLVACAPYVKSDVNTALVGRVHCGTFAWAGEFRSNSPLRSTIANPVNESRLRAAIAAHLGGRIQP
Ga0318519_109948232	3300033290	Soil	MKCVLRAALTVSLSALTLNACAPYVHSDVNTAAISRVHCGSFAWAGEFRSNSPLR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088042

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences