Metagenome / Metatranscriptome Family F088040

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F088040
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	80 residues
Representative Sequence	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPIPRTAQQVSALSGSWAGPRPA
Number of Associated Samples	61
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.72 %
% of genes near scaffold ends (potentially truncated)	35.78 %
% of genes from short scaffolds (< 2000 bps)	85.32 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (81.651 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.945 % of family members)
Environment Ontology (ENVO)	Unclassified (59.633 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.138 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.56% β-sheet: 0.00% Coil/Unstructured: 44.44%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF04226	Transgly_assoc	1.83
PF00975	Thioesterase	1.83
PF02371	Transposase_20	1.83
PF13417	GST_N_3	0.92
PF08241	Methyltransf_11	0.92
PF00027	cNMP_binding	0.92
PF00313	CSD	0.92
PF13460	NAD_binding_10	0.92
PF13436	Gly-zipper_OmpA	0.92
PF13410	GST_C_2	0.92
PF12158	DUF3592	0.92
PF00691	OmpA	0.92
PF02272	DHHA1	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.83
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
All Organisms	root	All Organisms	18.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
cellular organisms	root	All Organisms → cellular organisms	18.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	18.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.01 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.34 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.75 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.92 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.75 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.92 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.75 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	0.92 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	81.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.75 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.92 %
Bradyrhizobium macuxiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	0.92 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1008710	Not Available	1646	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10009144	Not Available	2727	Open in IMG/M
3300004633\|Ga0066395_10215086	Not Available	1013	Open in IMG/M
3300004633\|Ga0066395_10420538	Not Available	757	Open in IMG/M
3300004633\|Ga0066395_10976219	Not Available	516	Open in IMG/M
3300005332\|Ga0066388_100313096	All Organisms → cellular organisms → Bacteria → Proteobacteria	2215	Open in IMG/M
3300005332\|Ga0066388_100914912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1453	Open in IMG/M
3300005332\|Ga0066388_101395592	Not Available	1216	Open in IMG/M
3300005332\|Ga0066388_102036303	Not Available	1030	Open in IMG/M
3300005332\|Ga0066388_102994121	Not Available	863	Open in IMG/M
3300005332\|Ga0066388_106179546	Not Available	605	Open in IMG/M
3300005363\|Ga0008090_10083141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1308	Open in IMG/M
3300005363\|Ga0008090_15813542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1010	Open in IMG/M
3300005764\|Ga0066903_100532104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2006	Open in IMG/M
3300005764\|Ga0066903_101519491	Not Available	1265	Open in IMG/M
3300005764\|Ga0066903_106634186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	602	Open in IMG/M
3300010048\|Ga0126373_11371912	Not Available	772	Open in IMG/M
3300010358\|Ga0126370_10821400	Not Available	831	Open in IMG/M
3300010360\|Ga0126372_10863358	Not Available	903	Open in IMG/M
3300010360\|Ga0126372_11993106	Not Available	627	Open in IMG/M
3300010361\|Ga0126378_10363654	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300010361\|Ga0126378_11867331	Not Available	684	Open in IMG/M
3300010366\|Ga0126379_10051435	All Organisms → cellular organisms → Bacteria	3394	Open in IMG/M
3300010366\|Ga0126379_13745064	Not Available	509	Open in IMG/M
3300010376\|Ga0126381_100555142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1628	Open in IMG/M
3300010376\|Ga0126381_102299074	Not Available	774	Open in IMG/M
3300010398\|Ga0126383_10631318	Not Available	1145	Open in IMG/M
3300010868\|Ga0124844_1001254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	3218	Open in IMG/M
3300012971\|Ga0126369_10253787	Not Available	1732	Open in IMG/M
3300012971\|Ga0126369_13133958	Not Available	541	Open in IMG/M
3300012971\|Ga0126369_13378374	Not Available	523	Open in IMG/M
3300016270\|Ga0182036_10119947	Not Available	1823	Open in IMG/M
3300016270\|Ga0182036_10693156	Not Available	823	Open in IMG/M
3300016341\|Ga0182035_10082096	All Organisms → cellular organisms → Bacteria → Proteobacteria	2304	Open in IMG/M
3300016341\|Ga0182035_11952097	Not Available	533	Open in IMG/M
3300016357\|Ga0182032_10466771	Not Available	1032	Open in IMG/M
3300016371\|Ga0182034_10480187	Not Available	1033	Open in IMG/M
3300016371\|Ga0182034_11063907	Not Available	700	Open in IMG/M
3300016371\|Ga0182034_11594554	Not Available	573	Open in IMG/M
3300016404\|Ga0182037_10488457	Not Available	1030	Open in IMG/M
3300016404\|Ga0182037_10952137	Not Available	746	Open in IMG/M
3300016422\|Ga0182039_10097914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2157	Open in IMG/M
3300016422\|Ga0182039_10550123	Not Available	1003	Open in IMG/M
3300016445\|Ga0182038_11069827	Not Available	716	Open in IMG/M
3300016445\|Ga0182038_11186476	Not Available	680	Open in IMG/M
3300017959\|Ga0187779_10217391	Not Available	1200	Open in IMG/M
3300017973\|Ga0187780_10388019	Not Available	990	Open in IMG/M
3300017999\|Ga0187767_10217192	Not Available	613	Open in IMG/M
3300018058\|Ga0187766_10046831	Not Available	2534	Open in IMG/M
3300021560\|Ga0126371_10151304	All Organisms → cellular organisms → Bacteria	2382	Open in IMG/M
3300021560\|Ga0126371_10199864	Not Available	2093	Open in IMG/M
3300021560\|Ga0126371_10389002	Not Available	1535	Open in IMG/M
3300021560\|Ga0126371_12451755	Not Available	631	Open in IMG/M
3300027003\|Ga0207722_1004959	Not Available	1645	Open in IMG/M
3300027049\|Ga0207806_1010861	Not Available	1115	Open in IMG/M
3300027680\|Ga0207826_1083693	Not Available	879	Open in IMG/M
3300027703\|Ga0207862_1007836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3116	Open in IMG/M
3300031057\|Ga0170834_110146362	Not Available	547	Open in IMG/M
3300031543\|Ga0318516_10181974	Not Available	1211	Open in IMG/M
3300031543\|Ga0318516_10322523	Not Available	892	Open in IMG/M
3300031543\|Ga0318516_10355542	Not Available	845	Open in IMG/M
3300031545\|Ga0318541_10141688	Not Available	1315	Open in IMG/M
3300031545\|Ga0318541_10419672	Not Available	748	Open in IMG/M
3300031545\|Ga0318541_10728759	Not Available	553	Open in IMG/M
3300031546\|Ga0318538_10564605	Not Available	617	Open in IMG/M
3300031564\|Ga0318573_10554345	Not Available	619	Open in IMG/M
3300031573\|Ga0310915_10083352	Not Available	2131	Open in IMG/M
3300031573\|Ga0310915_10372921	Not Available	1013	Open in IMG/M
3300031573\|Ga0310915_11280934	Not Available	505	Open in IMG/M
3300031680\|Ga0318574_10157076	Not Available	1294	Open in IMG/M
3300031681\|Ga0318572_10347937	Not Available	879	Open in IMG/M
3300031736\|Ga0318501_10320601	Not Available	829	Open in IMG/M
3300031736\|Ga0318501_10524181	Not Available	647	Open in IMG/M
3300031768\|Ga0318509_10085857	Not Available	1676	Open in IMG/M
3300031781\|Ga0318547_10263824	Not Available	1041	Open in IMG/M
3300031792\|Ga0318529_10227865	Not Available	866	Open in IMG/M
3300031792\|Ga0318529_10229669	Not Available	862	Open in IMG/M
3300031796\|Ga0318576_10628446	Not Available	506	Open in IMG/M
3300031879\|Ga0306919_10005184	All Organisms → cellular organisms → Bacteria	6887	Open in IMG/M
3300031879\|Ga0306919_10450839	Not Available	990	Open in IMG/M
3300031879\|Ga0306919_10666615	Not Available	802	Open in IMG/M
3300031880\|Ga0318544_10398963	Not Available	535	Open in IMG/M
3300031890\|Ga0306925_10097027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3134	Open in IMG/M
3300031890\|Ga0306925_10538892	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300031912\|Ga0306921_10248549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2084	Open in IMG/M
3300031912\|Ga0306921_10333026	Not Available	1776	Open in IMG/M
3300031912\|Ga0306921_12353089	Not Available	557	Open in IMG/M
3300031941\|Ga0310912_10705631	Not Available	782	Open in IMG/M
3300031942\|Ga0310916_10048220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium macuxiense	3241	Open in IMG/M
3300031945\|Ga0310913_10382123	Not Available	998	Open in IMG/M
3300031945\|Ga0310913_10735023	Not Available	697	Open in IMG/M
3300031946\|Ga0310910_10303580	All Organisms → cellular organisms → Bacteria → Proteobacteria	1256	Open in IMG/M
3300031946\|Ga0310910_10551871	Not Available	914	Open in IMG/M
3300031946\|Ga0310910_10857850	Not Available	713	Open in IMG/M
3300031954\|Ga0306926_10612141	Not Available	1329	Open in IMG/M
3300031954\|Ga0306926_12577818	Not Available	555	Open in IMG/M
3300032001\|Ga0306922_11192348	Not Available	775	Open in IMG/M
3300032044\|Ga0318558_10579407	Not Available	561	Open in IMG/M
3300032060\|Ga0318505_10406858	Not Available	643	Open in IMG/M
3300032064\|Ga0318510_10271810	Not Available	701	Open in IMG/M
3300032091\|Ga0318577_10052531	Not Available	1833	Open in IMG/M
3300032094\|Ga0318540_10065726	Not Available	1657	Open in IMG/M
3300032094\|Ga0318540_10176369	Not Available	1028	Open in IMG/M
3300032261\|Ga0306920_100593965	Not Available	1638	Open in IMG/M
3300032261\|Ga0306920_101503725	Not Available	961	Open in IMG/M
3300032261\|Ga0306920_102454260	Not Available	718	Open in IMG/M
3300033289\|Ga0310914_10464104	Not Available	1146	Open in IMG/M
3300033289\|Ga0310914_11249078	Not Available	645	Open in IMG/M
3300033289\|Ga0310914_11528300	Not Available	571	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.73%
Loam	Environmental → Terrestrial → Soil → Loam	15.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.67%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	62.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.51%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.67%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.67%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.75%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.83%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027003	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10087102	3300000580	Forest Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKALAPTKPIPRTTQQVSTFGGSAEPRPA*
AF_2010_repII_A1DRAFT_100091442	3300000597	Forest Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA*
Ga0066395_102150863	3300004633	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAADDVLRITYLDLARRWRKMAHEAESLERKALAPTKPIPRTAQQVSALSGSWAGPRPA*
Ga0066395_104205382	3300004633	Tropical Forest Soil	LPVRLRKWLVGTTMVLNRADECRQRADECRRSAAQVADNVLRVTYLDLARRWRMMAHEAELLERKAMGPPKSTSRTAENVSAVLSGSWAGTRAT*
Ga0066395_109762191	3300004633	Tropical Forest Soil	MVLNRADECRQRADECRRNAAQLVADDALRGAYLDLARLWRKMAHEAESLERKAAGQTKPMPQTAEQAFALM*
Ga0066388_1003130964	3300005332	Tropical Forest Soil	MVLNRADECRQRADECRRSAAQVADEVLRVTYLDLARRWRKMAHEAELLERKAVGPTKSTPGTAEQVSAFSGLRARTRAT*
Ga0066388_1009149122	3300005332	Tropical Forest Soil	RQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHKAESLERKAMAPNETNTRTAQQVSALSGSWAGPRPA*
Ga0066388_1013955924	3300005332	Tropical Forest Soil	RADECRRGAAQAADDVLRVTYLDLARRWRKMAHDAESLERKAMAPTKPIPRTAQEVSGLSGSWAGPRPA*
Ga0066388_1020363031	3300005332	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKRTPRRAQQVSALSGLQGGPRPA*
Ga0066388_1029941212	3300005332	Tropical Forest Soil	MVLNRADECRQRADECRRSAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAVGPPKSTSRTAENVSVLSSSWAGTRAT*
Ga0066388_1061795462	3300005332	Tropical Forest Soil	RRSAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAMGLPKSTPGTAEQVSALSAFGRDLGRRSLTA*
Ga0008090_100831412	3300005363	Tropical Rainforest Soil	MVLNRADECRQRADECRRGAAQAADDVLRITYLDLARRWRKMAQEAESLERKALAPTKPIPRTAQQASALSGSWAGPRPA*
Ga0008090_158135421	3300005363	Tropical Rainforest Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA*
Ga0066903_1005321043	3300005764	Tropical Forest Soil	MVLNRADECRRRADECRRGAAQAADDVLRVTYLDLARRWRKMAHDAESLERKAMAPTKPIPRTAQEVSGLSGSWAGPRPA*
Ga0066903_1015194913	3300005764	Tropical Forest Soil	MVLNRSDECRQRADECRRSAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAMGLPKSTPGTAEQVSALSAFGRDLGRRSLTA*
Ga0066903_1066341861	3300005764	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAPDDVLRETYLDLARRWRKMAHEAESLERKALAPTKPIPRTAQQV
Ga0126373_113719121	3300010048	Tropical Forest Soil	MVLNRADECRQRADECRRNAAQLVADDALRGAYLDLARLWRKMAHEAESLERKAMAPTKRIPRRAQQVSALSGLRGGPRPA*
Ga0126370_108214003	3300010358	Tropical Forest Soil	MALNRADECRQRADECRRCAAETADDVLRVTYLDLARRWRKMAHEAESMKRKAMGPTKPIPRTAERVSALSGSWAGPRQA*
Ga0126372_108633581	3300010360	Tropical Forest Soil	MALNRADECRQRADECRRSAAETADDVLRVTYLDLARRWRMMAHEAESMERKAMGPTNPIPRTAERVSAISGLW
Ga0126372_119931061	3300010360	Tropical Forest Soil	MVLNRADECRRNAAQLVADDALRGAYLDLARLWRKMAHEAESLERKAAGQTKPMPQTAEQAFALM*
Ga0126378_103636543	3300010361	Tropical Forest Soil	MALNRADECRQRADECRRSAAETADDVLRVTYLDLARRWRMMAHEAESMKRKAMGPTKPIPRTAERVSALSGSWAGPRQA*
Ga0126378_118673311	3300010361	Tropical Forest Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTSQQVSTLSGSAEPRPA*
Ga0126379_100514358	3300010366	Tropical Forest Soil	MALNRADECRQRADECRRSAAETADDVLRVTYLDLARRWRMMAHEAESMKRKAMDPTKPIPRTAERVSALSGSWAGPRQA*
Ga0126379_137450642	3300010366	Tropical Forest Soil	MVLNRADECRQRADECRRNAAQLVADDVLRGAYLDLARLWRKMAHEAESLERKAAGQTKPMPQTAEQAFALM*
Ga0126381_1005551422	3300010376	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHKAESLERKAMAPNETNTRTAQQVSALSESWAGPRPA*
Ga0126381_1022990742	3300010376	Tropical Forest Soil	ALAQAECLPVRLRKWLVGTTMVLNRADECRQRADECRGSAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAVGPPKSTSRTAENVSVLSSSWAGTRAT*
Ga0126383_106313182	3300010398	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTSQQVSTLSGSAEPRPA*
Ga0124844_10012543	3300010868	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHKAESLERKAMAPNETNTRTAQQVSALSGSWAGPRPA*
Ga0126369_102537871	3300012971	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAADDVLRITYLDLARRWRKMAHEAESLERKALAPTKPIPRTAQQVSALSGSLAGPRPA*
Ga0126369_131339582	3300012971	Tropical Forest Soil	APKMALNRADECRQRADECRRSAAETADDVLRVTYLDLARRWRMMAHEAESMKRKAMGPTKPIPRTAERVSALSGSWAGPRQA*
Ga0126369_133783742	3300012971	Tropical Forest Soil	MVLNRADECRQRADECRGSAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAMGPPKSTSRTAENVSAVLSGSWAGTR
Ga0182036_101199472	3300016270	Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAIAPTKPILRTTQQVSTFGGSAEPRPA
Ga0182036_106931561	3300016270	Soil	AMVLNRADECRRRADECRRGAAQAADDMLRATYLDLARRWRKMAHEAESLERKAAGPTKSISRTAEQVFALSGSGPRPV
Ga0182035_100820961	3300016341	Soil	LNRADECRRRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERRAAGPTKPIPRTAEQVFALSGSGSRPV
Ga0182035_119520972	3300016341	Soil	ECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPIPRTAQQVSALSGSWAGPRPA
Ga0182032_104667712	3300016357	Soil	MVLNRADECRQRADECRRSAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAMGPPKSTSRTAENVSAVLSGSWAGTRAT
Ga0182034_104801872	3300016371	Soil	RKWLGTTMVLNRADECRQRADECRRSAAQVADDMLRVTYLDLAHRWRMMAHEAELLEQKAMGPPKSTSRTAENVSAVLSGSWAGTRAT
Ga0182034_110639071	3300016371	Soil	VRLRKWLGTTMVLNRADECRQRADECRRSATQVADDVLRVTYLDLARRWRMMAHEAELLERKAVGPPKSTSRTAENVSVFSSSWAGTRAT
Ga0182034_115945541	3300016371	Soil	MVLNRAAECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAELLERKAASPTKAIPRTAEQVFALSGSRPRPV
Ga0182037_104884572	3300016404	Soil	MVLNRADECRQRANECRRRAAQVADDVLRVTYLDLARRWRVMAHEAELLERKAMGPLKSTPRAAEQVSALGGLWARSRAT
Ga0182037_109521371	3300016404	Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKRIPRRAQQVSALSGLRGGPRPA
Ga0182039_100979142	3300016422	Soil	MVLNRADECRQRADECRRSAAQVANDVLRVTYLDLARRWRMMAHEAELLERKAVGPPKSTSRTAENVSVLSSSWAGTRAT
Ga0182039_105501231	3300016422	Soil	RADECRRRADECRRGAAQAADDMLRATYLDLARRWRKMAHEAESLERKAAGPTKSISRTAEQVFALSGSGPRPV
Ga0182038_110698272	3300016445	Soil	AIFAAMCLLSTSVGRMPVCTFTEVAWGTTMVLNRADECRQRADECRRSAVQAADEVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPIPCTAERVSALSGSWAGPRPA
Ga0182038_111864761	3300016445	Soil	MALNRPDECRQRADECRRSAAQVADDVLRETYLDLARRWRMMAHEAELLERKAVGPPKPTPRTGEQVSALSGLWARPRSDVA
Ga0187779_102173912	3300017959	Tropical Peatland	MVPNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAREAESLERKAVGPTKPMPRTAEQVFALSGSGPRPL
Ga0187780_103880192	3300017973	Tropical Peatland	MLPNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWREMAHEAESLERKAVGPTKPMPRTAEQVFALSGSGPRPL
Ga0187767_102171921	3300017999	Tropical Peatland	MLPNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAREAESLERKAVGPTKPMPRTAEPVFALSGSGPRPV
Ga0187766_100468313	3300018058	Tropical Peatland	MLPNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAQSLQRKAAGPTKPMPRTAEPVFALSGSGPRPV
Ga0126371_101513043	3300021560	Tropical Forest Soil	MALNRADECRQRADECRRSAAETADDVLRVTYLDLARRWRMMAHEAESMKRKAMGPTKPIPRTAERVSALSGSWAGPRQA
Ga0126371_101998645	3300021560	Tropical Forest Soil	MVLNRADECRQRADECRRNAAQLVADDALRGAYLDLARLWRKMAHEAESLERKAAGQTKPMPQTAEQAFALM
Ga0126371_103890023	3300021560	Tropical Forest Soil	MVLNRADECRQRADECRRSAAQVADDVLRVTYLDLARRWRTMAHEAELLERKAMGPPKSTSRTAENVSAVLSG
Ga0126371_124517551	3300021560	Tropical Forest Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHKAESLERKALAPNETNSRTAQQVSALSGSWAGPRPA
Ga0207722_10049591	3300027003	Tropical Forest Soil	MVLNRADECRQRADECRRSAAQAADDVLRVTYLDLAHRWRMMAHEAESMERKAMGPTKPILRTAERVFALSGSWAGSRPA
Ga0207806_10108611	3300027049	Tropical Forest Soil	MPVCTFTEVAWGTTMVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAAGPTKPIPRTAEQVFALSGSGPRPV
Ga0207826_10836931	3300027680	Tropical Forest Soil	RADECRRSAAQAADDVLRVTYLDLAHRWRMMAHEAESMERKAMGPTKPILRTAERVFALSGSWAGSRPA
Ga0207862_10078361	3300027703	Tropical Forest Soil	MVRNRADECRQRADECRRSAAQVADDVLRVTYLDLARRWRTMAHEAESLERKAMGPTKPIPRTAEQVCALGGSWAGARAGVA
Ga0170834_1101463621	3300031057	Forest Soil	MVLNRADECRQRADECRSGAAQAADDVLRVTYLDLARRWRKMALEAESLERKAAGPTKQMPRIAEQVFALSGTGPRPA
Ga0318516_101819742	3300031543	Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA
Ga0318516_103225232	3300031543	Soil	MVLNRADECRRRADECRRGAAQAADDMLRATYLDLARRWRKMAHEAESLERKAAGPTKSISRTAEQVFALSGSGPRPV
Ga0318516_103555421	3300031543	Soil	MVLNRADECRRRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERRAAGPTKPIPRTAEQVFALSGSGSRPV
Ga0318541_101416881	3300031545	Soil	MVLNPAAECRQRADECRRSAAQVTDDVLRVTYLDLARRWRMMAHQAESLERKATSATKPASPIAEQ
Ga0318541_104196722	3300031545	Soil	MVLNRADECRQRADECRRSAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAVGPPKSTSRTAENVSVLSSSWAGTRAT
Ga0318541_107287591	3300031545	Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQ
Ga0318538_105646052	3300031546	Soil	MVLNRADECRQRADECRRSATQVADDVLRVTYLDLARRWRMMAHEAELLERKAVGPPKSTSRTAENVSVLSSSWAGTRAT
Ga0318573_105543451	3300031564	Soil	MVLNRADECRRRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAAGPTKSISRTAEQVFALSGSGPRPV
Ga0310915_100833525	3300031573	Soil	MPVCTFTEVAWGTTMVLNRADECRHRADECRRSAAQAADDVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPIPRTAERVSALSGSWAGPRPA
Ga0310915_103729212	3300031573	Soil	MVLNRADECRQRANECRRRAAQVADDVLRVTYLDLARRWRVMAHEAELLERKAMGPLKSTPRAAEQVSALGGFWARSRAT
Ga0310915_112809341	3300031573	Soil	MVLNRAAECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAELLERKAASPTKPIPRTAEQVFALSGSRP
Ga0318574_101570761	3300031680	Soil	MMLNRVDECRQRANECRRRAAQVADDVLRVTYLDLARRWRMMAHEAELLERKAVGPPKSTSRTAENVSVLSSSWAGTRAT
Ga0318572_103479371	3300031681	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA
Ga0318501_103206012	3300031736	Soil	ITMVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA
Ga0318501_105241812	3300031736	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKALVPTKPIPRTAQQVSALSGSWAGPRPA
Ga0318509_100858571	3300031768	Soil	MVLNRADECRRRADECRRGAAQAADDMLRATYLDLARRWRKMAHEAESLERRAAGPTKPIPRTAEQVFALSGSGSRPV
Ga0318547_102638241	3300031781	Soil	VITMVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA
Ga0318529_102278651	3300031792	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTLGGSAEPRPA
Ga0318529_102296691	3300031792	Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVST
Ga0318576_106284461	3300031796	Soil	ARLYVYGGGLGATMVLNRADECRQRADECRRSAAQAADDVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPIPRTAERVSALSGSWAGPRPA
Ga0306919_100051841	3300031879	Soil	MVLNRADECRRRADECRRGAAQAADDMLRATYLDLARRWRKMAHEAESLERKAAGPTKSISRTAEQVFALSGSGPR
Ga0306919_104508391	3300031879	Soil	MPVCTFTEVAWGTTMVLNRADECRQRADECRRSAAQAADDVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPILRTAERVFALSGSWAGSRPA
Ga0306919_106666151	3300031879	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKRIPRRAQQVSAFSGLRGGPRPA
Ga0318544_103989632	3300031880	Soil	MVLNRADECRQRADECRRAAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPIPRTAQQVPALSGSWAGPRPA
Ga0306925_100970276	3300031890	Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTLGGSAEPRPA
Ga0306925_105388923	3300031890	Soil	MALNRPDECRQRADECRRSAAQVADDVLRETYLDLARRWRMMAHEAELLERKTVGPPKSTPRTGEQVSALSGLWARPRSDVA
Ga0306921_102485491	3300031912	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLAHRWRKMAHEAESLERKAAGPTKPIPLTAEHVFALSGSEPRPV
Ga0306921_103330261	3300031912	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPIPRTAQQVSALSGSWAGPRPA
Ga0306921_123530891	3300031912	Soil	MVLNRAAECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAELLERKAASPTKPIPRTAEQVFALSGSRPRPV
Ga0310912_107056311	3300031941	Soil	STSVGRMPVCTFTEVAWGTTMVLNRADECRQRADECRRSAAQAADDVLRVTYLDLAHRWRMMAHEAESMERKAMGPTKPIPRTAERVSALSGSWAGPRPA
Ga0310916_100482201	3300031942	Soil	MVLNRADECRQRADECRRSAVQAADEVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPIPRTAERVSALSGSWAGPRPA
Ga0310913_103821231	3300031945	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPIPRTAQQVPALSGSWAGPRPA
Ga0310913_107350231	3300031945	Soil	MPVCTFTEVAWGTTMVLNRADECRQRADECRRSAAQAADDVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPILRTAERVFALSGSWAGPRPA
Ga0310910_103035801	3300031946	Soil	MVLNRADECRQRADECRRSAAQAADDVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPILRTAERVFALSGSWAGSRPA
Ga0310910_105518713	3300031946	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKRIPRRAQQVSALSGLRGGPR
Ga0310910_108578502	3300031946	Soil	FVISAAMCLFSTSVGRMPVCTFTEVAWGTTMVLNRADECRQRADECRRSAVQAADEVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPIPCTAERVSALSGSWAGPRPA
Ga0306926_106121414	3300031954	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTLG
Ga0306926_125778181	3300031954	Soil	MVLNPADECRQRADECRRSAAQVTDDVLRVTYLDLARRWRMMAHQAESLERKATSATKPASHTAEQVSASRGF
Ga0306922_111923482	3300032001	Soil	MVPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTF
Ga0318558_105794071	3300032044	Soil	MVLNRADECRRRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA
Ga0318505_104068581	3300032060	Soil	QRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTFGGSAEPRPA
Ga0318510_102718102	3300032064	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKRIPRRAQQVSALSGLRGGPRPA
Ga0318577_100525311	3300032091	Soil	MIPNRASECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTLGGSAEPRPA
Ga0318540_100657261	3300032094	Soil	RADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKPILRTTQQVSTLGGSAEPRPA
Ga0318540_101763692	3300032094	Soil	ITMVLNRADECRRRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERRAAGPTKPIPRTAEQVFALSGSGSRPV
Ga0306920_1005939653	3300032261	Soil	MVLNRADECRQRADECRRGAAQAADDVLRVTYLDLARRWRKMAHEAESLERKAMAPTKRIPRRAQVSALSGLRGGPRPA
Ga0306920_1015037252	3300032261	Soil	LFSTSVGRMPVCTFTEVAWGTTMVLNRADECRQRADECRRSAVQAADEVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPIPCTAERVSALSGSWAGPRPA
Ga0306920_1024542601	3300032261	Soil	MVLNRPDECRQRADECRRRAAQVADDVLRVTYLDLARRWRVMAHEAEMLERKAVGPPKSTPRTALGG
Ga0310914_104641041	3300033289	Soil	MVLNRPDECRQRADECRRRAAQVADDVLRVTYLDLARRWRVMAHEAEMLERKAVGPPKSTPRTAEQVSALGGLWARSRAT
Ga0310914_112490781	3300033289	Soil	SSGSCAIFAAMCLLSTSVGRMPVCTFTEVAWGTTMVLNRADECRQRADECRRSAAQAADDVLRVTYLDLARRWRMMAHEAESMERKAMGPTKPILRTAERVFALSGSWAGSRPA
Ga0310914_115283002	3300033289	Soil	YLLQMCLFSTSVARMPVCTVTAVAWRTTMVLNRADECRQRADECRRSAAQATDDVLRATYLDLARRWRMMAHEAESMERKAMGLTKPIPRTAERVSALSGSWAGPRPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088040

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences