NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F088013

Metagenome / Metatranscriptome Family F088013

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088013
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 56 residues
Representative Sequence WGFILLLFVGLSQAIYPSDHFDFAAKLDSQSKYDELVNAAVEGDHTLFVRWIASER
Number of Associated Samples 63
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 97.25 %
% of genes from short scaffolds (< 2000 bps) 99.08 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Eukaryota (99.083 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(68.807 % of family members)
Environment Ontology (ENVO) Unclassified
(39.450 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(93.578 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 54.76%    β-sheet: 0.00%    Coil/Unstructured: 45.24%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.08 %
UnclassifiedrootN/A0.92 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300011333|Ga0127502_10454034All Organisms → cellular organisms → Eukaryota → Sar515Open in IMG/M
3300012212|Ga0150985_103523875All Organisms → cellular organisms → Eukaryota687Open in IMG/M
3300012212|Ga0150985_112014214All Organisms → cellular organisms → Eukaryota → Sar653Open in IMG/M
3300012469|Ga0150984_101705742All Organisms → cellular organisms → Eukaryota705Open in IMG/M
3300012469|Ga0150984_113170038All Organisms → cellular organisms → Eukaryota → Sar705Open in IMG/M
3300012469|Ga0150984_121859319All Organisms → cellular organisms → Eukaryota → Sar682Open in IMG/M
3300019258|Ga0181504_1283049All Organisms → cellular organisms → Eukaryota → Sar687Open in IMG/M
3300030537|Ga0247642_1010936All Organisms → cellular organisms → Eukaryota709Open in IMG/M
3300030537|Ga0247642_1011833All Organisms → cellular organisms → Eukaryota698Open in IMG/M
3300030547|Ga0247656_1164175All Organisms → cellular organisms → Eukaryota → Sar570Open in IMG/M
3300030550|Ga0247631_1048298All Organisms → cellular organisms → Eukaryota → Sar697Open in IMG/M
3300030551|Ga0247638_1069834All Organisms → cellular organisms → Eukaryota → Sar727Open in IMG/M
3300030551|Ga0247638_1077866All Organisms → cellular organisms → Eukaryota → Sar703Open in IMG/M
3300030552|Ga0247654_1081725All Organisms → cellular organisms → Eukaryota → Sar657Open in IMG/M
3300030553|Ga0247645_1073836All Organisms → cellular organisms → Eukaryota713Open in IMG/M
3300030553|Ga0247645_1114505All Organisms → cellular organisms → Eukaryota636Open in IMG/M
3300030554|Ga0247640_1089333All Organisms → cellular organisms → Eukaryota → Sar699Open in IMG/M
3300030554|Ga0247640_1157209All Organisms → cellular organisms → Eukaryota → Sar565Open in IMG/M
3300030555|Ga0247618_1071133All Organisms → cellular organisms → Eukaryota664Open in IMG/M
3300030563|Ga0247653_1000734All Organisms → cellular organisms → Eukaryota1215Open in IMG/M
3300030563|Ga0247653_1013363All Organisms → cellular organisms → Eukaryota → Sar760Open in IMG/M
3300030563|Ga0247653_1023282All Organisms → cellular organisms → Eukaryota → Sar689Open in IMG/M
3300030563|Ga0247653_1024242All Organisms → cellular organisms → Eukaryota → Sar685Open in IMG/M
3300030565|Ga0247635_1127698All Organisms → cellular organisms → Eukaryota → Sar688Open in IMG/M
3300030573|Ga0210272_1132398All Organisms → cellular organisms → Eukaryota → Sar662Open in IMG/M
3300030573|Ga0210272_1161622All Organisms → cellular organisms → Eukaryota → Sar627Open in IMG/M
3300030574|Ga0247648_1103922All Organisms → cellular organisms → Eukaryota641Open in IMG/M
3300030574|Ga0247648_1121374All Organisms → cellular organisms → Eukaryota → Sar611Open in IMG/M
3300030579|Ga0247633_10314331All Organisms → cellular organisms → Eukaryota518Open in IMG/M
3300030585|Ga0247639_1121290All Organisms → cellular organisms → Eukaryota703Open in IMG/M
3300030585|Ga0247639_1171002All Organisms → cellular organisms → Eukaryota → Sar629Open in IMG/M
3300030589|Ga0210255_10062686All Organisms → cellular organisms → Eukaryota → Sar730Open in IMG/M
3300030591|Ga0247626_1161594All Organisms → cellular organisms → Eukaryota620Open in IMG/M
3300030592|Ga0247612_1109162All Organisms → cellular organisms → Eukaryota → Sar645Open in IMG/M
3300030597|Ga0210286_1151615All Organisms → cellular organisms → Eukaryota → Sar665Open in IMG/M
3300030599|Ga0247630_1089119All Organisms → cellular organisms → Eukaryota684Open in IMG/M
3300030600|Ga0247659_1056810All Organisms → cellular organisms → Eukaryota → Sar736Open in IMG/M
3300030601|Ga0247650_1047491All Organisms → cellular organisms → Eukaryota → Sar688Open in IMG/M
3300030601|Ga0247650_1070636All Organisms → cellular organisms → Eukaryota633Open in IMG/M
3300030607|Ga0247615_10180127All Organisms → cellular organisms → Eukaryota → Sar683Open in IMG/M
3300030608|Ga0247651_10117143All Organisms → cellular organisms → Eukaryota → Sar714Open in IMG/M
3300030608|Ga0247651_10123510All Organisms → cellular organisms → Eukaryota → Sar703Open in IMG/M
3300030608|Ga0247651_10158396All Organisms → cellular organisms → Eukaryota → Sar654Open in IMG/M
3300030609|Ga0247634_10205849All Organisms → cellular organisms → Eukaryota718Open in IMG/M
3300030609|Ga0247634_10269094All Organisms → cellular organisms → Eukaryota → Sar661Open in IMG/M
3300030610|Ga0247613_10185246All Organisms → cellular organisms → Eukaryota717Open in IMG/M
3300030610|Ga0247613_10213025All Organisms → cellular organisms → Eukaryota → Sar684Open in IMG/M
3300030610|Ga0247613_10273977All Organisms → cellular organisms → Eukaryota627Open in IMG/M
3300030610|Ga0247613_10322757All Organisms → cellular organisms → Eukaryota → Sar590Open in IMG/M
3300030614|Ga0247657_10104474All Organisms → cellular organisms → Eukaryota → Sar679Open in IMG/M
3300030621|Ga0247655_10122111All Organisms → cellular organisms → Eukaryota689Open in IMG/M
3300030622|Ga0265391_10137057All Organisms → cellular organisms → Eukaryota → Sar675Open in IMG/M
3300030623|Ga0265392_1078877All Organisms → cellular organisms → Eukaryota → Sar709Open in IMG/M
3300030626|Ga0210291_11515637All Organisms → cellular organisms → Eukaryota → Sar677Open in IMG/M
3300030626|Ga0210291_12022065All Organisms → cellular organisms → Eukaryota → Sar689Open in IMG/M
3300030628|Ga0247629_10192017All Organisms → cellular organisms → Eukaryota → Sar691Open in IMG/M
3300030634|Ga0247636_10161314All Organisms → cellular organisms → Eukaryota → Sar683Open in IMG/M
3300030634|Ga0247636_10163786All Organisms → cellular organisms → Eukaryota680Open in IMG/M
3300030738|Ga0265462_11068299All Organisms → cellular organisms → Eukaryota → Sar703Open in IMG/M
3300030743|Ga0265461_11593414All Organisms → cellular organisms → Eukaryota → Sar714Open in IMG/M
3300030777|Ga0075402_10002798All Organisms → cellular organisms → Eukaryota626Open in IMG/M
3300030777|Ga0075402_12345336All Organisms → cellular organisms → Eukaryota505Open in IMG/M
3300030778|Ga0075398_12126817All Organisms → cellular organisms → Eukaryota → Sar594Open in IMG/M
3300030778|Ga0075398_12142884All Organisms → cellular organisms → Eukaryota663Open in IMG/M
3300030839|Ga0073999_10166621All Organisms → cellular organisms → Eukaryota → Sar692Open in IMG/M
3300030841|Ga0075384_11480596All Organisms → cellular organisms → Eukaryota → Sar706Open in IMG/M
3300030845|Ga0075397_10905222All Organisms → cellular organisms → Eukaryota → Sar632Open in IMG/M
3300030845|Ga0075397_11192656All Organisms → cellular organisms → Eukaryota → Sar702Open in IMG/M
3300030846|Ga0075403_10939124All Organisms → cellular organisms → Eukaryota671Open in IMG/M
3300030847|Ga0075405_11679610All Organisms → cellular organisms → Eukaryota655Open in IMG/M
3300030850|Ga0075387_11237354All Organisms → cellular organisms → Eukaryota → Sar622Open in IMG/M
3300030851|Ga0075380_11585325All Organisms → cellular organisms → Eukaryota → Sar690Open in IMG/M
3300030923|Ga0138296_1377450All Organisms → cellular organisms → Eukaryota → Sar574Open in IMG/M
3300030934|Ga0075391_11338133All Organisms → cellular organisms → Eukaryota → Sar666Open in IMG/M
3300030947|Ga0075390_11199931All Organisms → cellular organisms → Eukaryota661Open in IMG/M
3300030947|Ga0075390_11278206All Organisms → cellular organisms → Eukaryota → Sar605Open in IMG/M
3300030971|Ga0075375_12041386All Organisms → cellular organisms → Eukaryota592Open in IMG/M
3300030972|Ga0075400_11731842All Organisms → cellular organisms → Eukaryota652Open in IMG/M
3300030972|Ga0075400_11806133All Organisms → cellular organisms → Eukaryota → Sar591Open in IMG/M
3300030974|Ga0075371_11866085All Organisms → cellular organisms → Eukaryota633Open in IMG/M
3300030979|Ga0068589_11868919All Organisms → cellular organisms → Eukaryota → Sar707Open in IMG/M
3300030988|Ga0308183_1085077All Organisms → cellular organisms → Eukaryota → Sar697Open in IMG/M
3300030988|Ga0308183_1111030All Organisms → cellular organisms → Eukaryota → Sar636Open in IMG/M
3300031057|Ga0170834_101203613All Organisms → cellular organisms → Eukaryota710Open in IMG/M
3300031057|Ga0170834_103601700All Organisms → cellular organisms → Eukaryota → Sar719Open in IMG/M
3300031057|Ga0170834_107693211All Organisms → cellular organisms → Eukaryota → Sar684Open in IMG/M
3300031057|Ga0170834_108029780All Organisms → cellular organisms → Eukaryota710Open in IMG/M
3300031057|Ga0170834_108242745All Organisms → cellular organisms → Eukaryota → Sar724Open in IMG/M
3300031057|Ga0170834_110275422All Organisms → cellular organisms → Eukaryota → Sar682Open in IMG/M
3300031057|Ga0170834_110931080All Organisms → cellular organisms → Eukaryota → Sar684Open in IMG/M
3300031057|Ga0170834_112186520All Organisms → cellular organisms → Eukaryota → Sar677Open in IMG/M
3300031122|Ga0170822_10834868All Organisms → cellular organisms → Eukaryota703Open in IMG/M
3300031122|Ga0170822_11056879All Organisms → cellular organisms → Eukaryota696Open in IMG/M
3300031122|Ga0170822_11739245All Organisms → cellular organisms → Eukaryota → Sar676Open in IMG/M
3300031122|Ga0170822_13207910All Organisms → cellular organisms → Eukaryota → Sar691Open in IMG/M
3300031128|Ga0170823_11368029All Organisms → cellular organisms → Eukaryota → Sar677Open in IMG/M
3300031231|Ga0170824_107271348All Organisms → cellular organisms → Eukaryota → Sar702Open in IMG/M
3300031231|Ga0170824_110226988All Organisms → cellular organisms → Eukaryota710Open in IMG/M
3300031446|Ga0170820_12661828All Organisms → cellular organisms → Eukaryota676Open in IMG/M
3300031446|Ga0170820_13853566All Organisms → cellular organisms → Eukaryota631Open in IMG/M
3300031446|Ga0170820_16659793All Organisms → cellular organisms → Eukaryota → Sar655Open in IMG/M
3300031446|Ga0170820_17871776All Organisms → cellular organisms → Eukaryota → Sar642Open in IMG/M
3300031469|Ga0170819_10376826All Organisms → cellular organisms → Eukaryota680Open in IMG/M
3300031469|Ga0170819_11113471All Organisms → cellular organisms → Eukaryota701Open in IMG/M
3300031469|Ga0170819_12882720All Organisms → cellular organisms → Eukaryota685Open in IMG/M
3300031469|Ga0170819_14146123All Organisms → cellular organisms → Eukaryota691Open in IMG/M
3300031474|Ga0170818_107098571All Organisms → cellular organisms → Eukaryota699Open in IMG/M
3300031474|Ga0170818_111637136All Organisms → cellular organisms → Eukaryota689Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil68.81%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil22.94%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere2.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.83%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.83%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.92%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300011333Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300019258Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030537Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb7 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030547Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db9 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030550Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb8 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030551Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb3 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030552Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db7 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030553Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb10 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030554Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb5 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030555Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Ab7 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030563Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb6 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030565Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb12 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030573Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO036SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030574Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db1 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030579Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb10 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030585Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb4 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030589Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR019SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030591Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb3 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030592Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Ab1 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030597Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE046SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030599Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bb7 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030600Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb12 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030601Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db3 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030607Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Anb4 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030608Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb4 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030609Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb11 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030610Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Ab2 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030614Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Dnb10 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030621Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db8 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030622Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300030623Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE043SO (Eukaryote Community Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300030626Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030628Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb6 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030634Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb1 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030738Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assemblyEnvironmentalOpen in IMG/M
3300030741Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assemblyEnvironmentalOpen in IMG/M
3300030743Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assemblyEnvironmentalOpen in IMG/M
3300030777Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030778Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030839Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFB (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030841Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030845Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030846Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030847Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030850Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030851Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030923Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300030934Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030947Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030971Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030972Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030974Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030979Forest soil microbial communities from France, for metatranscriptomics studies - Site 11 - Champenoux / Amance forest (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030988Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0127502_1045403423300011333SoilWGFIVLLFVGLSQAIYPADHFDFAVKVDTQSKYDELVKEAVEGDHTLFVRWIASER*
Ga0150985_10352387513300012212Avena Fatua RhizosphereLMQQGLWGLFVLLFVGLSQGIYPADHFDTVAKIDSQSKYDELVNAAVEGDHTLFVRWIASER*
Ga0150985_11201421413300012212Avena Fatua RhizosphereKKKGMNGLFGLMAVLFVGLSGAIYPADHFDYATKIDSKDTYDALFKSAVEGDHTLFVRWIASER*
Ga0150984_10170574213300012469Avena Fatua RhizosphereVMTGFSGFLVVLFVGLSQAIYPPGHFDLAAKIDSLTKYEELVNAAVEGDHTLFVRWIASER*
Ga0150984_11317003823300012469Avena Fatua RhizosphereMQGLWGLFVLLYVGLSQAIYPAGHFDLAAKIDSQAKYDELVNAAVEGDHTLFVRWIASER
Ga0150984_12185931913300012469Avena Fatua RhizosphereFVGLSGAIYPADHFDYATKIDSKDTYDALVKSAVEGDHTLFVRWIASER*
Ga0181504_128304923300019258PeatlandGMWALALLFIGLCQAIYPPDHFDYVTKVDSQAKYDELVNAAVEGDHTLFVRWIASER
Ga0247642_101093613300030537SoilVMTGFSGFLVVLFVGLSQAIYPPGHFDLAAKIDSLTKYEELVNAAVEGDHTLFVRWIASE
Ga0247642_101183333300030537SoilGLWGLLAVLFVGLSHAIYPTDHFDYATKIDSQDTYDALVNSAVEGDHTLFVRWIASER
Ga0247656_116417533300030547SoilFLGAIFLLLVGLSQAIYPPDHFDFSSKIDSQSKLDEEVKKAVEGDHTLFVRWIASER
Ga0247631_104829813300030550SoilPSMAGFWGFILLLFVGLSQAIYPSDHFDFAAKLDSQSKYDELVNAAVEGDHTLFVRWIASER
Ga0247638_106983413300030551SoilSQILMAGFLGAIFLLLVGLSQAIYPPDHFDFSSKIDSQSKLDEEVKKAVEGDHTLFVRWIASER
Ga0247638_107786633300030551SoilPIILMAGFWGFILVLFVGLSQAIYPPDHFDFSSKIDSQSKFDELVKSAVEGDHTLFVRWIASER
Ga0247654_108172523300030552SoilVLFVGLSQAIYPPDHFDFSSKIDSQSKFDELVKSAVEGDHTLFVRWIASER
Ga0247645_107383613300030553SoilGFWAFVLLLFVGLSQAIYPSDHFDFAAKIDSQGKYDELVNAAVEGDHTLFVRWIASER
Ga0247645_111450523300030553SoilGTIPDVMTGFSGFLVVLFVGLSKAIYPPGHFDLAAKIDSLTKYEELVNAAVDGDHTLFVRWIASER
Ga0247640_108933323300030554SoilPLSMAGFWGFILLLFVGLSQAIYPSDLKSTKLDDQAKYDELVNAAVAGDHTLFVRWIASE
Ga0247640_115720923300030554SoilFWGFILVLFVGLSQAIYPPDHFDFSSKIDSQSKFDELVKSAVEGDHTLFVRWIASER
Ga0247618_107113333300030555SoilVGLSQAIYPPGHFDRVEKIDSLTKYEELVNAAVEGDHTLFVRWIASER
Ga0247653_100073433300030563SoilPLSMAGFWGFILLLFVGLSQAIYPSDLKSTKLDDQAKYDELLNAAVEGDHTLFVRWIASE
Ga0247653_101336333300030563SoilAIFLLLVGLSQAIYPPDHFDFSSKIDSQSKLDEEVKKAVEGDHTLFVRWIASER
Ga0247653_102328223300030563SoilGFWGFILVLFVGLSQAIYPPDHFDFSSKIDSQSKFDELVKSAVEGDHTLFVRWIASER
Ga0247653_102424213300030563SoilFVGLAQAIYPPGHFDLAEKIDSQTKYEELVNAAVEGDHTLFVRWIASER
Ga0247635_112769813300030565SoilPLSMAGFWGFILLLFVGLSQAIYPSDLKSTKLDDQAKYDELVNAAVEGDHTLFVRWIASE
Ga0210272_113239823300030573SoilVTLLFVGLCQAIYPPDHFDYATKLDSQAKYDEMVKAAVEGDHTLFVRWIASER
Ga0210272_116162223300030573SoilGLCQAIYPPDHFDYASKVDSQAKYDELVNGAVEGDHTLFLRWIASER
Ga0247648_110392213300030574SoilTGFSGLLVVLFVGLAQAIYPPGHFDLAEKIDSQTKYEELVNAAVEGDHTLFVRWIASER
Ga0247648_112137433300030574SoilAIFLLLVGLSQAIYPADHFDFSTKIDSATKLDDEVKKAVEGDHTLFVRWIASER
Ga0247633_1031433123300030579SoilGFLVLLLVGLSQAIYPPGHFDHCDKIDSQTKYDELVNAAVEGDHTLFVRWIASER
Ga0247639_112129013300030585SoilAPLILMVGLWGFIVLLFVGLSQAIYPADHFDFAAKVDTQSKYDELVKEAVEGDHTLFVRWIASER
Ga0247639_117100233300030585SoilMAGFWGFILVLFVGLSQAIYPPDHFDFSSKIDSQSKFDELVKSAVEGDHTLFVRWIASER
Ga0210255_1006268613300030589SoilSEPMWAVVLLFIGLCQAIYPPDHFDYASKVDSQAKYDELVNGAVEGDHTLFLRWIASER
Ga0247626_116159413300030591SoilFSQILMAGFLGAIFLLLVGLSQAIYPPDHFDFSSKIDSQSKLDEEVKKAVEGDHTLFVRWIASER
Ga0247612_110916223300030592SoilVGLSQAIYPPDHFDFSSKIDSQSKLDEEVKKAVEGDHTLFVRWIASER
Ga0210286_115161513300030597SoilLLFIGLCQAIYPPDHFDYASKVDSQAKYDELVNGAVEGDHTLFLRWIASER
Ga0247630_108911933300030599SoilFSGFLVVLFVGLSQAIYPPGHFDLAEKIDSLTKYEELVNAAVEGDHTLFVRWIASER
Ga0247659_105681013300030600SoilVLIFSQILMAGFLGAIFLLLVGLSQAIYPPDHFDFSSKIDSQSKLDEEVKKAVEGDHTLFVRWIASER
Ga0247650_104749123300030601SoilAGFWGFILVLFVGLSQAIYPPDHFDFSSKIDSQSKFDELVKSAVEGDHTLFVRWIASER
Ga0247650_107063613300030601SoilTGFSGFLVVLFVGLSQAIYPPGHFDLAEKIDSLTKYEELVNAAVEGDHTLFVRWIASER
Ga0247615_1018012723300030607SoilLMAGFLGAIFLLLVGLSQAIYPADHFDFSTKIDSATKLDDEVKKAVEGDHTLFVRWIASE
Ga0247651_1011714313300030608SoilGFLGLFLVLFVGLSQAIYPPDHFDFASKVDSQSKLDELVKSAVEGDHTLFVRWIASER
Ga0247651_1012351013300030608SoilMRNVLWGLALLLGLSNAIYPSDHFDYATNIDTQNKYDELIQGAIEGDHTLFVRWIASER
Ga0247651_1015839623300030608SoilGVLGANFLLMAGLSQAIYPPDHFDFSSKIDSQSKLDEEVKKAVEGDHTLFVRWIASER
Ga0247634_1020584913300030609SoilGFSGLLVVLFVGLAQAIYPPGHFDLAEKIDSQTKYEELVNAAVEGDHTLFVRWIASER
Ga0247634_1026909433300030609SoilGFWGFILLLFVGLSQAIYPSDLKSTKLDDQAKYDELVNAAVAGDHTLFVRWIASER
Ga0247613_1018524613300030610SoilPLILMVGLWGFIVLLFVGLSQAIYPADHFDFAAKVDTQSKYDELVKEAVEGDHTLFVRWIASER
Ga0247613_1021302513300030610SoilAGFLGAIFLLLVGLSQAIYPPDHFDFSSKIDSQSKLDEEVKKAVEGDHTLFVRWIASER
Ga0247613_1027397723300030610SoilVLSHMVGFWGFLVLFFVGLSQAIYATDHWDHVSKIDSQAKYDELVNAAVEGDHTLFVRWIASER
Ga0247613_1032275713300030610SoilAGFLGAIFLLLVGLSQAIYPADHFDFSTKIDSATKLDDEVKKAVEGDHTLFVRWIASER
Ga0247657_1010447413300030614SoilAFVLLLFVGLSQAIYPSDHFDFAAKIDSQGKYDELVNAAVEGDHTLFVRWIASER
Ga0247655_1012211113300030621SoilGFILLLFVGLSQAIYPSDHFDFAAKLDSQSKYDELVNAAVEGDHTLFIRWIASER
Ga0265391_1013705713300030622SoilPIALLLIGLCQAIYPPDHFDYATKIDSQAKYDELVNAAVEGDHTLFVRWIASER
Ga0265392_107887723300030623SoilLCSEPMWAVVLLFIGLCQAIYPPDHFDYASKVDSQAKYDELVNGAVEGDHTLFLRWIASE
Ga0210291_1151563713300030626SoilYWSLLFFVCLSVAIYPADHFDFATKLDSVEMYDELVGKAVEGDHTLFVRWVASER
Ga0210291_1202206523300030626SoilWAVTLLFVGLCQAIYPPDHFDYATKLDSQAKYDEMAKAAVEGDHTLFVRWIASER
Ga0247629_1019201723300030628SoilLMAGFWGFILVLFVGLSQAIYPPDHFDFSSKIDSQSKFDELVKSAVEGDHTLFVRWIASE
Ga0247636_1016131413300030634SoilAGFLGLFLVLFVGLSQAIYPPDHFDFASKVDSQSKLDELVKSAVEGDHTLFVRWIASER
Ga0247636_1016378623300030634SoilWGFILLLFVGLSQAIYPSDHFDFAAKLDSQSKYDELVNAAVEGDHTLFVRWIASER
Ga0265462_1106829913300030738SoilAILVKMRYWSLLFFVCLSVAIYPADHFDFATKLDSVEMYDELVGKAVEGDHTLFVRWVASER
Ga0265459_1185594433300030741SoilGLCLGNIYPEGHFTYVTKLDSAGQYDELVSKAVEGDHTLFVRWIASER
Ga0265461_1159341423300030743SoilLLFFVCLSVAIYPADHFDFATKLDSVEMYDELVGKAVEGDHTLFVRWVASER
Ga0075402_1000279813300030777SoilCVGLSQAIYPPGHFDSVAKVDSQSKYDELVNAAVEGDHTLFVRWIASER
Ga0075402_1234533613300030777SoilGFWGFILLLFVGLSQAIYPSDHFDFATKLDDQAKYDELVNAAVEGDHTLFVRWIASER
Ga0075398_1212681733300030778SoilLVLACVGLSQAIYPPGHFDSVAKVDSQSKYDELVNAAVEGDHTLFVRWIASER
Ga0075398_1214288413300030778SoilVVLLLFVGLSQAIYPSDHFDFAAKIDSQGKYDELVNAAVEGDHTLFVRWIASER
Ga0073999_1016662123300030839SoilLGFLVLACVGLSQAIYPAGHFDLVAKLDSQAKYDELVNAAVEGDHTLFVRWIASER
Ga0075384_1148059613300030841SoilGFLGFLVLACVGLSQAIYPAGHFDLVAKVDSQEKYDDLVNAAVEGDHTLFVRWIASER
Ga0075397_1090522213300030845SoilCVGLSQAIYPSDHFDFAAKIDSQPKYDELVNAAVEGDHTLFVRWIASER
Ga0075397_1119265623300030845SoilLWSLALLFVGLSHAIYPSDHFDFVAKLDSKEKYDDLVKSAVEGDHTVFVRWIASER
Ga0075403_1093912413300030846SoilLFVGLSQAIYPSDHFDFATKLDDQAKYDELVNAAVEGDHTLFVRWIASER
Ga0075405_1167961013300030847SoilRLLVVLFVGLSQAIYPPGHFDLAEKIDSQDKYDQLVNAAVEGDHTLFVRWIASER
Ga0075387_1123735423300030850SoilGSIYPADLFDHATKLDSADKYNELVNKAVEGDHTLFVRWIASER
Ga0075380_1158532533300030851SoilLWGLALLLGLSNAIYPSDHFDFATNIDTQAKYDELVQGAVEGDHTLFVRWIASER
Ga0138296_137745013300030923SoilSGDPMSGFLGFLVLACVGLSQAIYPAGHFDLVAKVDSQVKYDELVNAAVEGDHTLFVRWIASER
Ga0075391_1133813323300030934SoilLLFVGLSYGSIYPADHFDHATKLDSADKYNELVNKAVEGDHTLFVRWIASER
Ga0075390_1119993123300030947SoilLSQAIYPAGHFDLVAKVDSQSKYDELVNAAVEGDHTLFVRWIASER
Ga0075390_1127820613300030947SoilGLSNAIYPSDHFDFATNIDTQAKYDELVQGAVEGDHTLFVRWIASER
Ga0075375_1204138613300030971SoilFLGFLVLACVGLSQAIYPPGHFDSVAKVDSQSKYDELVNAAVEGDHTLFVRWIASER
Ga0075400_1173184213300030972SoilSQAIYPSDHFDFAAKIDSQGKYDELVNAAVEGDHTLFVRWIASER
Ga0075400_1180613313300030972SoilGFLVLACVGLSQAIYPAGHFDLVAKVDSQEKYDDLVNAAVEGDHTLFVRWIASER
Ga0075371_1186608513300030974SoilARFWGFILLLCVGLSQAIYPSDHFDFAAKIDSQPKYDELVNAAVEGDHTLFVRWIASER
Ga0068589_1186891913300030979SoilRNVLWGLALLLGLSNAIYPSDHFDYVTNIDTQTKYDELVQGAIEGDHTLFVRWIASER
Ga0308183_108507733300030988SoilLLTMQQGLWGLFVLLFVGLSQGIYPADHFDTVAKIDSQSKYDELVNAAVEGDHTLFVRWIASER
Ga0308183_111103013300030988SoilGLLVVLFVGLAQAIYPPGHFDLAEKIDSQTKYEELVNAAVEGDHTLFVRWIASER
Ga0170834_10120361313300031057Forest SoilLVLMARFWGFILLLCVGLSQAIYPSDHFDFAAKIDSQPKYDELVNAAVEGDHTLFVRWIASER
Ga0170834_10360170023300031057Forest SoilPMSGFLGFLVLACVGLSQAIYPAGHFDLVAKVDSQEKYDDLVNAAVEGDHTLFVRWIASE
Ga0170834_10769321113300031057Forest SoilLFLLFVGLSYGSIYPADHFDHATKLDSADKYNELVNKAVEGDHTLFVRWIASER
Ga0170834_10802978013300031057Forest SoilPMTGFLGFVVLACIGLSQAIYPPGHFDLVAKVDSQAKYDELVNAAVEGDHTLFVRWIASE
Ga0170834_10824274523300031057Forest SoilVLWSLALLFVGLSHAIYPSDHFDFVAKLDSKEKYDDLVKSAVEGDHTVFVRWIASER
Ga0170834_11027542213300031057Forest SoilWSFLVLLCVGMSQAIYPPGHWDRATKIDTEAKYDELVKNAVEGDHTLFIRWIASER
Ga0170834_11093108013300031057Forest SoilLFLLFVGLSYAGIYPADHFDHATKLDSADKYNELVKQAVEGDHTLFVRWIASER
Ga0170834_11218652023300031057Forest SoilALLFIGLSQAIYPPDHFDYARKIDSQAKYDEEVNAAVAGDHTLFVRWIASER
Ga0170822_1083486823300031122Forest SoilLVLMARFWGFILLFCVGLSQAIYPSDHFDFAAKIDSQPKYDELVNAAVEGDHTLFVRWIASER
Ga0170822_1105687923300031122Forest SoilFLGFVVLACIGLSQAIYPPGHFDLVAKVDSQAKYDELVNAAVEGDHTLFVRWIASER
Ga0170822_1173924513300031122Forest SoilACVGLSQAIYPAGHFDLVAKVDSQEKYDDLVNAAVEGDHTLFVRWIASER
Ga0170822_1320791013300031122Forest SoilFRMKWALFLLFVGLSYGSIYPADHFDHATKLDSADKYNELVNKAVEGDHTLFVRWIASER
Ga0170823_1136802913300031128Forest SoilALFLLFVGLSYGSIYPADHFDHATKLDSADKYNELVNKAVEGDHTLFVRWIASER
Ga0170824_10727134813300031231Forest SoilVWGILVLLFVGLVQSAGPMYADDHWNFVSKIDSQGKYDELVSAAVEGDHTLFVRWIASER
Ga0170824_11022698813300031231Forest SoilMQGLWGLFILLYVGLSQAIYPAGHFDLVAKIDSQAKYDELVNAAVEGDHTLFVRWIASER
Ga0170820_1266182823300031446Forest SoilWAFVLLLFVGLSQAIYPSDHFDFAAKIDSQGKYDELVNAAVEGDHTLFVRWIASERGG
Ga0170820_1385356613300031446Forest SoilRFWGFILLFCVGLSQAIYPSDHFDFAAKIDSQPKYDELVNAAVEGDHTLFVRWIASER
Ga0170820_1665979313300031446Forest SoilIFVLLLVGLVQSGGPMYADDHWNFVSKIDSQGKYDELVSAAVEGDHTLFVRWIASER
Ga0170820_1787177623300031446Forest SoilLLFVGLSYGGIYPTDHFDHATKLDSADKYNELVNKAVEGDHTLFVRWIASER
Ga0170819_1037682613300031469Forest SoilILLLFVGLSQAIYPSDHFDFATKLDDQAKYDELVNAAVEGDHTLFVRWIASER
Ga0170819_1111347123300031469Forest SoilTGFWAFVLLLFVGLSQAIYPSDHFDFAAKIDSQGKYDELVNAAVEGDHTLFVRWIASER
Ga0170819_1288272013300031469Forest SoilFLVVLFVGLSQAIYPPGHFDHASNIDSQAKYDELVNAAVEGDHTLFVRWIASER
Ga0170819_1414612323300031469Forest SoilGLFVLLYVGLSQAIYPAGHFDLAAKIDSQAKYDELVNAAVEGDHTLFVRWIASER
Ga0170818_10709857113300031474Forest SoilTGFWAFVLLLFVGLSQAIYPSDHFDFAAKLDSQDKYDELVNAAVEGDHTLFVRWIASER
Ga0170818_11163713623300031474Forest SoilDDPMTGFLGFLVLACVGLSQAIYPPGHFDSVAKVDSQSKYDELVNAAVEGDHTLFVRWIASER

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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