NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F088008

Metagenome / Metatranscriptome Family F088008

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F088008
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 52 residues
Representative Sequence VLLHLIIKGLFRRNVIALNSLLIKIASFTVCNRANNLASVLNVVTIPCLFAL
Number of Associated Samples 13
Number of Associated Scaffolds 105

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 84.40 %
% of genes near scaffold ends (potentially truncated) 20.18 %
% of genes from short scaffolds (< 2000 bps) 22.02 %
Associated GOLD sequencing projects 13
AlphaFold2 3D model prediction Yes
3D model pTM-score0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Eukaryota (76.147 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza
(81.651 % of family members)
Environment Ontology (ENVO) Unclassified
(82.569 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(72.477 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 62.50%    β-sheet: 0.00%    Coil/Unstructured: 37.50%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 105 Family Scaffolds
PF07727RVT_2 8.57
PF00400WD40 3.81
PF05699Dimer_Tnp_hAT 1.90
PF13843DDE_Tnp_1_7 1.90
PF00069Pkinase 1.90
PF08022FAD_binding_8 0.95
PF01624MutS_I 0.95
PF13384HTH_23 0.95
PF02796HTH_7 0.95
PF13358DDE_3 0.95
PF04082Fungal_trans 0.95
PF13649Methyltransf_25 0.95
PF00227Proteasome 0.95
PF08284RVP_2 0.95
PF07690MFS_1 0.95
PF11913DUF3431 0.95
PF00083Sugar_tr 0.95
PF06985HET 0.95
PF00067p450 0.95
PF14681UPRTase 0.95
PF03184DDE_1 0.95
PF01265Cyto_heme_lyase 0.95
PF10156Med17 0.95
PF13087AAA_12 0.95
PF12796Ank_2 0.95
PF08719NADAR 0.95
PF09949APP1_cat 0.95
PF00078RVT_1 0.95
PF10312Cactin_mid 0.95
PF13359DDE_Tnp_4 0.95
PF00795CN_hydrolase 0.95
PF00673Ribosomal_L5_C 0.95

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 105 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 7.62
COG0094Ribosomal protein L5Translation, ribosomal structure and biogenesis [J] 0.95
COG0249DNA mismatch repair ATPase MutSReplication, recombination and repair [L] 0.95
COG063820S proteasome, alpha and beta subunitsPosttranslational modification, protein turnover, chaperones [O] 0.95
COG2124Cytochrome P450Defense mechanisms [V] 0.95
COG3236N-glycosidase YbiA/RibX (riboflavin biosynthesis, damage control), NADAR superfamilyDefense mechanisms [V] 0.95
COG3484Predicted proteasome-type proteasePosttranslational modification, protein turnover, chaperones [O] 0.95
COG5405ATP-dependent protease HslVU (ClpYQ), peptidase subunitPosttranslational modification, protein turnover, chaperones [O] 0.95


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.06 %
UnclassifiedrootN/A22.94 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300012206|Ga0137380_10992304Not Available718Open in IMG/M
3300012206|Ga0137380_11121853Not Available670Open in IMG/M
3300012206|Ga0137380_11559275Not Available545Open in IMG/M
3300012206|Ga0137380_11600111Not Available536Open in IMG/M
3300012208|Ga0137376_11120155Not Available673Open in IMG/M
3300012209|Ga0137379_11154931Not Available680Open in IMG/M
3300012209|Ga0137379_11163622Not Available678Open in IMG/M
3300012209|Ga0137379_11514882Not Available571Open in IMG/M
3300012209|Ga0137379_11740337Not Available519Open in IMG/M
3300012351|Ga0137386_10316455All Organisms → cellular organisms → Eukaryota → Opisthokonta1123Open in IMG/M
3300012351|Ga0137386_10666953Not Available748Open in IMG/M
3300012351|Ga0137386_11298540Not Available504Open in IMG/M
3300012357|Ga0137384_11000274All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales672Open in IMG/M
3300012925|Ga0137419_11918713Not Available508Open in IMG/M
3300019890|Ga0193728_1190637Not Available868Open in IMG/M
3300024347|Ga0179591_1059704All Organisms → Viruses → Predicted Viral4318Open in IMG/M
3300024347|Ga0179591_1136693Not Available1235Open in IMG/M
3300026325|Ga0209152_10258012Not Available648Open in IMG/M
3300028794|Ga0307515_10001034All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina63620Open in IMG/M
3300028794|Ga0307515_10001034All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina63620Open in IMG/M
3300028794|Ga0307515_10003363All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Leotiomycetes → Helotiales → Rutstroemiaceae → Rutstroemia → unclassified Rutstroemia → Rutstroemia sp. NJR-2017a BVV233744Open in IMG/M
3300028794|Ga0307515_10004544All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes28620Open in IMG/M
3300028794|Ga0307515_10005549All Organisms → cellular organisms → Eukaryota → Opisthokonta25545Open in IMG/M
3300028794|Ga0307515_10020520All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporomycetidae incertae sedis → Gloniaceae → Glonium → Glonium stellatum11780Open in IMG/M
3300028794|Ga0307515_10024604All Organisms → cellular organisms → Eukaryota → Opisthokonta10483Open in IMG/M
3300028794|Ga0307515_10028024All Organisms → cellular organisms → Eukaryota → Opisthokonta9592Open in IMG/M
3300028794|Ga0307515_10035129Not Available8168Open in IMG/M
3300028794|Ga0307515_10040388All Organisms → cellular organisms → Eukaryota → Opisthokonta7379Open in IMG/M
3300028794|Ga0307515_10041286All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Chaetothyriomycetidae → Chaetothyriales → unclassified Chaetothyriales → Chaetothyriales sp. CBS 1349167258Open in IMG/M
3300028794|Ga0307515_10053011Not Available5998Open in IMG/M
3300031008|Ga0074038_11580064Not Available684Open in IMG/M
3300032756|Ga0315742_11662542All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales693Open in IMG/M
3300033179|Ga0307507_10000074All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina156177Open in IMG/M
3300033179|Ga0307507_10000079All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina148885Open in IMG/M
3300033179|Ga0307507_10000149All Organisms → cellular organisms → Eukaryota122711Open in IMG/M
3300033179|Ga0307507_10000190All Organisms → cellular organisms → Eukaryota → Opisthokonta113237Open in IMG/M
3300033179|Ga0307507_10000208All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina111118Open in IMG/M
3300033179|Ga0307507_10000250All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina104947Open in IMG/M
3300033179|Ga0307507_10000254All Organisms → cellular organisms → Eukaryota → Opisthokonta104356Open in IMG/M
3300033179|Ga0307507_10000264All Organisms → cellular organisms → Eukaryota → Opisthokonta102915Open in IMG/M
3300033179|Ga0307507_10000284All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes100922Open in IMG/M
3300033179|Ga0307507_10000323All Organisms → cellular organisms → Eukaryota → Opisthokonta96752Open in IMG/M
3300033179|Ga0307507_10000339All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina95112Open in IMG/M
3300033179|Ga0307507_10000457All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina85314Open in IMG/M
3300033179|Ga0307507_10000515All Organisms → cellular organisms → Eukaryota → Opisthokonta81630Open in IMG/M
3300033179|Ga0307507_10000516All Organisms → cellular organisms → Eukaryota → Opisthokonta81616Open in IMG/M
3300033179|Ga0307507_10000588All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes78395Open in IMG/M
3300033179|Ga0307507_10000589All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina78348Open in IMG/M
3300033179|Ga0307507_10000603All Organisms → cellular organisms → Eukaryota → Opisthokonta77640Open in IMG/M
3300033179|Ga0307507_10000632All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes76078Open in IMG/M
3300033179|Ga0307507_10000634All Organisms → cellular organisms → Eukaryota76015Open in IMG/M
3300033179|Ga0307507_10000634All Organisms → cellular organisms → Eukaryota76015Open in IMG/M
3300033179|Ga0307507_10000663Not Available74690Open in IMG/M
3300033179|Ga0307507_10000703All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina73410Open in IMG/M
3300033179|Ga0307507_10000745All Organisms → cellular organisms → Eukaryota71759Open in IMG/M
3300033179|Ga0307507_10000796All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina69772Open in IMG/M
3300033179|Ga0307507_10000811All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina69081Open in IMG/M
3300033179|Ga0307507_10000815All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae69028Open in IMG/M
3300033179|Ga0307507_10000861All Organisms → cellular organisms → Eukaryota → Opisthokonta67443Open in IMG/M
3300033179|Ga0307507_10000909All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina65863Open in IMG/M
3300033179|Ga0307507_10000954All Organisms → cellular organisms → Eukaryota → Opisthokonta64422Open in IMG/M
3300033179|Ga0307507_10001007All Organisms → cellular organisms → Eukaryota → Opisthokonta62797Open in IMG/M
3300033179|Ga0307507_10001112All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina59715Open in IMG/M
3300033179|Ga0307507_10001131All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina59166Open in IMG/M
3300033179|Ga0307507_10001176All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae58176Open in IMG/M
3300033179|Ga0307507_10001231All Organisms → cellular organisms → Eukaryota → Opisthokonta57132Open in IMG/M
3300033179|Ga0307507_10001321All Organisms → cellular organisms → Eukaryota → Opisthokonta55398Open in IMG/M
3300033179|Ga0307507_10001369All Organisms → cellular organisms → Eukaryota54619Open in IMG/M
3300033179|Ga0307507_10001375All Organisms → cellular organisms → Eukaryota → Opisthokonta54556Open in IMG/M
3300033179|Ga0307507_10001375All Organisms → cellular organisms → Eukaryota → Opisthokonta54556Open in IMG/M
3300033179|Ga0307507_10001613All Organisms → cellular organisms → Eukaryota → Opisthokonta49900Open in IMG/M
3300033179|Ga0307507_10001650All Organisms → cellular organisms → Eukaryota49395Open in IMG/M
3300033179|Ga0307507_10001707All Organisms → cellular organisms → Eukaryota → Opisthokonta48513Open in IMG/M
3300033179|Ga0307507_10001869All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporomycetidae incertae sedis → Gloniaceae → Glonium → Glonium stellatum45928Open in IMG/M
3300033179|Ga0307507_10001960All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes44656Open in IMG/M
3300033179|Ga0307507_10001961All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes44635Open in IMG/M
3300033179|Ga0307507_10001991All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Sordariomycetidae → Sordariales → Chaetomiaceae → Chaetomium → Chaetomium globosum → Chaetomium globosum CBS 148.5144294Open in IMG/M
3300033179|Ga0307507_10002068All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota43475Open in IMG/M
3300033179|Ga0307507_10002083All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Chaetothyriomycetidae → Chaetothyriales → unclassified Chaetothyriales → Chaetothyriales sp. CBS 13491643244Open in IMG/M
3300033179|Ga0307507_10002165All Organisms → cellular organisms → Eukaryota → Opisthokonta42176Open in IMG/M
3300033179|Ga0307507_10002228All Organisms → cellular organisms → Eukaryota → Opisthokonta41414Open in IMG/M
3300033179|Ga0307507_10002250All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina41212Open in IMG/M
3300033179|Ga0307507_10002322All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes40408Open in IMG/M
3300033179|Ga0307507_10002558Not Available37773Open in IMG/M
3300033179|Ga0307507_10002760All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes35897Open in IMG/M
3300033179|Ga0307507_10003114All Organisms → cellular organisms → Eukaryota → Opisthokonta33044Open in IMG/M
3300033179|Ga0307507_10003218All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae32231Open in IMG/M
3300033179|Ga0307507_10003276All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporomycetidae incertae sedis → Gloniaceae → Glonium → Glonium stellatum31837Open in IMG/M
3300033179|Ga0307507_10003497All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Massarineae → Periconiaceae → Periconia → Periconia macrospinosa30253Open in IMG/M
3300033179|Ga0307507_10004020All Organisms → cellular organisms → Eukaryota → Opisthokonta26973Open in IMG/M
3300033179|Ga0307507_10005329All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Chaetothyriomycetidae → Chaetothyriales → unclassified Chaetothyriales → Chaetothyriales sp. CBS 13491621255Open in IMG/M
3300033179|Ga0307507_10005554All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya20605Open in IMG/M
3300033179|Ga0307507_10005554All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya20605Open in IMG/M
3300033179|Ga0307507_10005635All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporomycetidae incertae sedis → Gloniaceae → Glonium → Glonium stellatum20345Open in IMG/M
3300033179|Ga0307507_10005657All Organisms → cellular organisms → Eukaryota → Opisthokonta20283Open in IMG/M
3300033179|Ga0307507_10005896All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina19496Open in IMG/M
3300033179|Ga0307507_10007377All Organisms → cellular organisms → Eukaryota → Opisthokonta16051Open in IMG/M
3300033179|Ga0307507_10008405All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → Eurotiomycetes → Chaetothyriomycetidae → Chaetothyriales → Herpotrichiellaceae → Rhinocladiella → Rhinocladiella mackenziei → Rhinocladiella mackenziei CBS 650.9314292Open in IMG/M
3300033179|Ga0307507_10010894All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota11604Open in IMG/M
3300033179|Ga0307507_10013760All Organisms → cellular organisms → Eukaryota → Opisthokonta9764Open in IMG/M
3300033179|Ga0307507_10015297All Organisms → cellular organisms → Eukaryota → Opisthokonta9041Open in IMG/M
3300033179|Ga0307507_10019220All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Dothideomycetes incertae sedis → Zopfiaceae → Zopfia → Zopfia rhizophila → Zopfia rhizophila CBS 207.267705Open in IMG/M
3300033179|Ga0307507_10028717Not Available5917Open in IMG/M
3300033179|Ga0307507_10066435All Organisms → cellular organisms → Eukaryota → Opisthokonta3306Open in IMG/M
3300033179|Ga0307507_10307941Not Available965Open in IMG/M
3300033179|Ga0307507_10321022Not Available932Open in IMG/M
3300033179|Ga0307507_10339359All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales891Open in IMG/M
3300033179|Ga0307507_10446568Not Available716Open in IMG/M
3300033179|Ga0307507_10612736Not Available560Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza81.65%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.92%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.92%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300028794Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EMHost-AssociatedOpen in IMG/M
3300031008Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Litter N1 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300032756Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined AssemblyEnvironmentalOpen in IMG/M
3300033179Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EMHost-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0137380_1099230413300012206Vadose Zone SoilMIN*SVWVLLQLIIKGSFSLNVIALNSLLIKIISFAVYNRANNSASVLD
Ga0137380_1112185313300012206Vadose Zone SoilMIKGLFSLNVIALNSLLIKIISFTVCDRANNSVSILNVVTISYLFALYTISPLNSYIIY
Ga0137380_1155927513300012206Vadose Zone SoilMIKGLFSLNVIVLNSLLIKIISFAIYDKANNLASVFNVITISCLFAFYVISLL
Ga0137380_1160011113300012206Vadose Zone SoilLIIKGSFSLNVIALNNLLIKIASFAVCDKANNSASILDVITISYLFALQAIGPPNSFI
Ga0137376_1112015513300012208Vadose Zone SoilVLSQLMIKGSFSLNVIALNNLLIKIASFAVCDKANNLASVLDVVTVLCLFAFYAINPLNSFILYFCEL
Ga0137379_1115493113300012209Vadose Zone SoilMIKGLFSLNIITLNNLLIKIASFTVCDKANNSVSVLNIVTISYLFAL*
Ga0137379_1116362213300012209Vadose Zone SoilMIKGLFSLNVIALNSLLIKIGSFTIYDRANNSAFMLNIVIISC
Ga0137379_1151488213300012209Vadose Zone SoilMIKGLFSLNVIVLNSLLIKIVFFAVCDRANNLAFMLNIVIISCLFALYVIGPLNS
Ga0137379_1174033713300012209Vadose Zone SoilVLLQLIIKGLFSLNVIALNSLLIKMAFFTVCDRANNSVFVLDIVTISCLFTLYAIGPL
Ga0137386_1031645533300012351Vadose Zone SoilSFSLNVLALNNLLIKIASFTVCDRANNSASVLDVVTVSCLFALQAIPPRIAS*
Ga0137386_1066695333300012351Vadose Zone SoilVLLQLMIKGLFSLNIIALNNLLIKIASFTVCDKANNLAFVLNVVIISCLFAL
Ga0137386_1129854013300012351Vadose Zone SoilMIKGSFSLNVIALNNLLIKIVSFAICDRANNSASMLNIVIIPCLFTLYAIGP
Ga0137384_1100027423300012357Vadose Zone SoilLIIKGLFSLNVIALNSLLIKIVSFAVCDRANNSAFMLNIITISCLFALYAIGPLN
Ga0137419_1191871313300012925Vadose Zone SoilLIIKGLFSLNIITLNSLLIKIASFTVYNRANNLASVLNVVTIPYLFTL*
Ga0193728_119063713300019890SoilFSLNVIALNSLLIKIASFTVYNRANNLASMLNVITIPYLFAL
Ga0179591_105970413300024347Vadose Zone SoilVLSQLIIKGSFSLNVITLSSLLIKIASFTVYNRANNLASILDVITISYLFAL
Ga0179591_113669313300024347Vadose Zone SoilVLLQLIIKGLFRYNVIALNNLLIKIASFTVYNRANNLASVLNVITIPYLFTL
Ga0209152_1025801213300026325SoilLIIKGLFSLNIITLNNLLIKIISFTIYNRANNLAFILNIITI
Ga0307515_10001034233300028794EctomycorrhizaVLLQLIIKGSFSCNVITLNSLLIKIASFAVYNRANSLASVLNVITVPCLFAL
Ga0307515_10001034293300028794EctomycorrhizaVLSHLIIKGSFSYNVITLNSLLIKIASFTICNRANNLAFILDVITVLYLFAL
Ga0307515_1000336393300028794EctomycorrhizaVLLQLIIKGSFSLNVITLSILLIKIASFTICNRANNSAFMLNVVTISCLFAL
Ga0307515_1000454413300028794EctomycorrhizaVLLHLIIKGSFSCNVIALNSLLIKIAFFAVCNRANNLASMLDIVTIPCLFAL
Ga0307515_1000554933300028794EctomycorrhizaVLSQLIIKGLFSCNVIILNSLLIKIASFTICNRANSLASVLNVITIPYLFTL
Ga0307515_1002052053300028794EctomycorrhizaVLSHLIIKGLFSYNVIALNSLLIKIASFTVCNRANNLTSVLDVITIPYLFAL
Ga0307515_1002460423300028794EctomycorrhizaVLSHLIIKGSFSCNVIALNSLLIKIASFTVCNRANNLASMLDVITIPYLFTL
Ga0307515_1002802443300028794EctomycorrhizaVLSHLIIKGSFSYNVITLNSLLMKIASFTVYNRANNSASVLDVVTIPYLFAL
Ga0307515_1003512923300028794EctomycorrhizaVLLQLIIKGLFSYNVITLNSLLIKIASFTICNRANSLASMLNVITIPYLFAL
Ga0307515_1004038813300028794EctomycorrhizaVLSYLIIKGLFSYNVIALNSLLMKIASFTICNRANNLASMLDVITVPYLFTL
Ga0307515_1004128633300028794EctomycorrhizaVLSQLIIKGSFSYNVIALNSLLIKIASFAVCNRANSLAFMLNVVTIPYLFAL
Ga0307515_1005301113300028794EctomycorrhizaVLLQLIIKGLFSYNVITLNSLLIKIASFTVCNRANSSAFILDVITIPCLFTL
Ga0074038_1158006413300031008SoilLMIKGSFSLNVIALSSLLMKIASFAVCDRANNSASALDVVPCLFALQAIGPLNSFIIYPC
Ga0315742_1166254213300032756Forest SoilLMIKGSFSLNVIALSSLLIKIASFAVCDRANNSASALDVVPCLFALQAIGPLNSFIMYPCELFLS
Ga0307507_10000074123300033179EctomycorrhizaVLSHLIIKGSFRRNIIALNSLLIKIASFTVYNRANNSASVLNVITIPYLFAL
Ga0307507_10000079283300033179EctomycorrhizaMLLYLIIKGLFRRNVIALNSLLIKIAFFTVCNRANNLAFILNVITIPCLFAL
Ga0307507_10000149103300033179EctomycorrhizaVLLHLIIKGLFRRNVIALNSLLIKIASFTVCNRANNLASVLNVVTIPCLFAL
Ga0307507_10000190103300033179EctomycorrhizaVLLYLIIKGSFRRNIITLNSLLIKIASFTVCNRANNSASVLNVITIPCLFAF
Ga0307507_1000020823300033179EctomycorrhizaVLLHLIIKGLFRRNVIALNSLLIKIASFTVYNRANNSASILNVITVPCLFAL
Ga0307507_10000250233300033179EctomycorrhizaVLLHLIIKGSFRCNIIALNSLLIKIASFTVYNRANNLASMLNIITIPYLFAL
Ga0307507_10000254193300033179EctomycorrhizaVLSHLIIKGLFRCNVITLNNLLIKIASFTVCNRANNLASVLNIITIPCLFAL
Ga0307507_10000264183300033179EctomycorrhizaMLLHLIIKGLFRYNVITLNSLLIKIAFFTVYNRANNLASMLNIITIPYLFTL
Ga0307507_10000284343300033179EctomycorrhizaVLLYLIIKGLFRRNVIALNSLLIKIASFTIYNRANNSAFILNVVTIPYLFAL
Ga0307507_10000323283300033179EctomycorrhizaMLLHLIIKGLFRRNIIALNSLLIKIASFTIYNRANNLASMLNVITVSYLFAL
Ga0307507_10000339313300033179EctomycorrhizaVLSHLIIKGLFRRNVIALNSLLIKIASFTICNRANNLASVLDVITISYLFTL
Ga0307507_10000457233300033179EctomycorrhizaVLSHLIIKGLFRCNVIALNSLLVKIASFAVCNRANNSASVLNVITIPYLFAL
Ga0307507_10000515463300033179EctomycorrhizaMLLHLIIKGLFRRNVITLNSLLIKIASFTICNRANNSASVLNVITIPYLFAL
Ga0307507_10000516133300033179EctomycorrhizaVLLHLIIKGLFSCNIITLNNLLIKIAPFTVYNRANNLASVLDVITIPCLFAL
Ga0307507_1000058833300033179EctomycorrhizaVLSHLIIKGLFRRNVITLNSLLVKIASFTICNRANNLASMLNVITIPCLFAL
Ga0307507_1000058933300033179EctomycorrhizaMLSHLIIKGLFRRNVIALNSLLIKIASFTVCDRANNLASMLNVVTIPCLFAL
Ga0307507_10000603173300033179EctomycorrhizaVLLHLIIKGLFRCNVIALNSLLIKIASFTVYNRANNSASVLDVITVPCLFAL
Ga0307507_10000632313300033179EctomycorrhizaVLSHLIIKGLFRCNVITLNSLLIKIASFTVYNRANNLASVLNVVTVPYLFAL
Ga0307507_10000634183300033179EctomycorrhizaVLLHLIIKGLFRRNVIALNSLLVKIASFTVYNRANNSASVLDVITIPCLFAL
Ga0307507_10000634223300033179EctomycorrhizaVLLHLIIKGLFKCNVITLNSLLVKIASFTIYNRANNSASMLNVITIPCLFAL
Ga0307507_10000663103300033179EctomycorrhizaVLLQLIIKGLFSLSIITLNSLPIKIVSFTVYNKANNLASMLNVITIPYLFAL
Ga0307507_10000703303300033179EctomycorrhizaVLSHLIIKGLFRRNVITLNSLLIKIASFTICNRVNNSASVLNVVTIPCLFAL
Ga0307507_1000074553300033179EctomycorrhizaVLSHLIIKGLFRRNVIALNSLLVKIAFFTIYNRANNLASVLNIITIPYLFAI
Ga0307507_1000079663300033179EctomycorrhizaVLLHLIIKGLFRRNVITLNSLLVKIASFTVYNRANNSASVLDVITIPCLFAL
Ga0307507_10000811143300033179EctomycorrhizaVLLHLIIKGLFSCNIIALNNLLIKIALFTIYNRANNLAFMLNIITIPCLFAF
Ga0307507_1000081573300033179EctomycorrhizaVLLHLIIKGSFRCNIITLNNLLIKIAFFPICNRANNLAFILNVITIPYLFAL
Ga0307507_1000086133300033179EctomycorrhizaMLSHLIIKGSFRRNVIALNSLLIKIASFTVCNRANNSASMLNVVTVPCLFAL
Ga0307507_10000909113300033179EctomycorrhizaVLSHLIIKGLFRRNVITLNSLLVKIASFAIYNRANNLASMLDVITIPCLFAL
Ga0307507_1000095483300033179EctomycorrhizaVLSHLIIKGLFSLNIIALNSLLIEIASFTVYNRANNLASMLNVVTVPCLFAL
Ga0307507_1000100723300033179EctomycorrhizaVLLHLIIKGLFRCNVIALNNLLIKIASFTVCNRANNLASMLNVITIPYLFAL
Ga0307507_10001112153300033179EctomycorrhizaVLLHLIIKGLFRCNVIALNSLLIKIAFFTVCNRANNLASILNVITIPCLFAL
Ga0307507_1000113123300033179EctomycorrhizaVLLHLIIKSLFRRNVIALNSLLVKIASFTICNRANNSTSILNVITIPCLFTL
Ga0307507_10001176413300033179EctomycorrhizaVLLHLIIKGSFRRNVIALNSLLVKIASFTICDRVNNSASVLNVIIIPCLFAL
Ga0307507_10001231123300033179EctomycorrhizaVLSHLIIKGSFSYNVIALNNLLIKIASFAVYNRANNLASVLNVVTIPCLFAL
Ga0307507_1000132113300033179EctomycorrhizaMSSVISWSVYILSHLIIKGLFRRNVIALNSLLIKIASFTVYNRANNSASMLNVVTIPCLFAL
Ga0307507_10001369123300033179EctomycorrhizaVLLYLIIKGSFRRNVIALNSLLVKIAFFTVCNRANNSASMLNVITIPCLFAL
Ga0307507_1000137513300033179EctomycorrhizaVLLQLITKGLFSLNIITLNSLLIKIASFTIYNRANNLASVLNVVTIPYLFTL
Ga0307507_10001375123300033179EctomycorrhizaVLSHLIIKGLFRCNVIALNSLLIKIASFTVCNRANNLASVLNVITIPCLFAL
Ga0307507_1000161363300033179EctomycorrhizaVLLYLIINSSFSLNIIALNSLLIKIASFAVYNRANNSASILNVITIPYLFTL
Ga0307507_1000165043300033179EctomycorrhizaVLLHLIIKGLFRHNVITLNSLLVKIAFFTVYNRANNLASVLNIITIPYLFAL
Ga0307507_1000170793300033179EctomycorrhizaVLLHLIIKGLFRRNVIALNSLLVKIASFTVCNRANNLASVLDVITIPCLFAL
Ga0307507_10001869183300033179EctomycorrhizaVLLHLIIKGLFRRNVIALNSLLVKTASFTIYNRANNSASMLNIITIPYLFAL
Ga0307507_10001960103300033179EctomycorrhizaVLSHLIIKGLFRRNVIALNSLLIKIASFAIYNRANNSASVLNVITIPYLFAL
Ga0307507_1000196133300033179EctomycorrhizaVLLHLIIKGLFSLNIITLNNLLIKIAFFTIYNKANNLASMLDVI
Ga0307507_1000199163300033179EctomycorrhizaVLLQLIIKGSFSLNIITLNSRLIKIAFFTVYNRANNSASILNVITIPCLFTL
Ga0307507_10002068123300033179EctomycorrhizaVLLHLIIKGSFRRNVITLNSLLIKIASFTVCVRANNLASVLNVVTIPCLFAL
Ga0307507_1000208313300033179EctomycorrhizaMLSHLIIKGSFRRNVIALNSLLIKIASFTIYNRANNLASVLNVITIPYLFAL
Ga0307507_10002165153300033179EctomycorrhizaVLLYLIIKGLFSLNVIALNSLLIKIASFTVCNRANNSASVLNVVTVPCLFAL
Ga0307507_1000222843300033179EctomycorrhizaVLSHLIIKGFFRRNVIALNSLLIKIASFTIYNRANNLASVLNIITIPCLFAL
Ga0307507_1000225023300033179EctomycorrhizaMLLHLIIKGSFRRNVIALNSLLIKIASFTVCNRANNSAFVLNVITIPCLFAL
Ga0307507_10002322133300033179EctomycorrhizaVLLYLIIKGLFRCNVIALNSLLIKIASFTVCNRANNLASILNVVTIPYLFAL
Ga0307507_1000255883300033179EctomycorrhizaVLLHLIIKGSFRRNVIALNSLLVKIASFTVCNRANNSASMLNVVTVPYLFAL
Ga0307507_1000276013300033179EctomycorrhizaVLLHLIIKGLFRRNVIALNSLLVKIASFTVYNRANNLASILNVITIPYLFAL
Ga0307507_1000311413300033179EctomycorrhizaVLLHLIIKGSFRRNVIALNSLLVKIASFTICNRANNSASVLNVVTIPCLFAL
Ga0307507_10003218173300033179EctomycorrhizaVLLHLIIKGLFRRNVITLNSLLIKIASFTIYNRANNLASILDVITVPCLFAL
Ga0307507_1000327693300033179EctomycorrhizaVLSHLIIKGSFRRNVIALNSLLVKIASFTVYNRANNSASMLNIITIPCLFAL
Ga0307507_1000349743300033179EctomycorrhizaVLSHLIIKGLFRRNVIALNSLLVKIASFTVYNRANNSASVLNVITIPCLFAL
Ga0307507_1000402033300033179EctomycorrhizaVLLYLIIKGLFRYNIIALNSLLIKIASFTVYNRANNLAFMLNVITIPCLFAL
Ga0307507_10005329103300033179EctomycorrhizaVLLHLIIKGLFSCNVIALNNLLIKIAFFAVCNRANNSASVLNVVTIPCLFAL
Ga0307507_1000555423300033179EctomycorrhizaVLSHLIIKGLFSLNVITLNSLLIKIASFTICNRANNSASVLNIITIPYLFTL
Ga0307507_1000555463300033179EctomycorrhizaVLSHLIIKGLFRRNVIALNSLLIKIAFFTIYNRANNLASVLNVVTIPCLFAL
Ga0307507_10005635133300033179EctomycorrhizaVLSHLIIKGLFRYNVITLNNLLIKIAFFAVCNRANNLASVLDIVTIPYLFTL
Ga0307507_1000565743300033179EctomycorrhizaMSSIISRSVYILLHLIIKGSFRRNIITLNSLLIKIASFAVYNRANNLASMLNVVTIPYLFAL
Ga0307507_1000589673300033179EctomycorrhizaMLSHLIIKGLFRRNVIALNSLLIKIAFFTVCNRANNLASMLDVITIPYLFAL
Ga0307507_1000737753300033179EctomycorrhizaVLLYLIIKGLFRRNVITLNSLLVKIASFTIYNRANNSASMLDVITIPCLFAL
Ga0307507_1000840523300033179EctomycorrhizaVLLHLIIKGLFRRNVIALNSLLIKIASFTICNRANNLASMLNVITIPSLFAL
Ga0307507_1001089413300033179EctomycorrhizaVLLHLIIKGSFRRNVIALNSLLVKIASFTVYNRANNSASILNVVTIPCLFAL
Ga0307507_1001376073300033179EctomycorrhizaVLLYLIIKGLFRRNVITLNSLLVKIASFTIYNRANNSASVLNIITIPCLFAL
Ga0307507_1001529743300033179EctomycorrhizaVLLHLIIKGLFRRNVITLNSLLIKIASFTIYNRANNSASILDVITVPCLFTL
Ga0307507_1001922013300033179EctomycorrhizaVLSQLIIKGLFRCNVITLNNLLIKIASFTVYNRANNLASVLNVITIPCLFTL
Ga0307507_1002871723300033179EctomycorrhizaVLSHLIIKGLFSCNIIALNNLLIKIAFFAVYNRANNSASVLNVITVPCLFAL
Ga0307507_1006643513300033179EctomycorrhizaVLLYLIIKGSFRRNVITLNSLLVKIASFTICNRANNLASILNVITIPCLFAL
Ga0307507_1030794113300033179EctomycorrhizaVLLHLIIKGLFSCNIIALNNLLIKIASFAVYNRANNLASVLNVVTISCLFALYIIGPLNSFIIY
Ga0307507_1032102213300033179EctomycorrhizaMFFIINXNVWVLLQLMIKGLFSLNIIALNSLLIKIAFFAICDRANNLVFVLNVVT
Ga0307507_1033935913300033179EctomycorrhizaVLLQLMIKGLFSLNVIALNSLLIKMASFAVCNRANNLASVLNIVTVFCLFAFYVISPLN
Ga0307507_1044656813300033179EctomycorrhizaIIKGSFRRNVIALNSLLIKIASFTICNRVNNLASVLNVVTIPYLFAL
Ga0307507_1061273613300033179EctomycorrhizaLIIKGSFSLNIIALNNLLIKITSFTVCNRANNLASILDVITIPYLFAL


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