Metagenome Family F087995

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087995
Family Type	Metagenome
Number of Sequences	109
Average Sequence Length	56 residues
Representative Sequence	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRPS
Number of Associated Samples	62
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	31.48 %
% of genes near scaffold ends (potentially truncated)	66.06 %
% of genes from short scaffolds (< 2000 bps)	91.74 %
Associated GOLD sequencing projects	55
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.055 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (52.294 % of family members)
Environment Ontology (ENVO)	Unclassified (88.073 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.294 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.69% β-sheet: 0.00% Coil/Unstructured: 29.31%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF13417	GST_N_3	8.26
PF00239	Resolvase	5.50
PF00476	DNA_pol_A	2.75
PF03734	YkuD	1.83
PF06048	DUF927	1.83
PF01964	ThiC_Rad_SAM	0.92
PF13545	HTH_Crp_2	0.92
PF00027	cNMP_binding	0.92
PF08240	ADH_N	0.92
PF04392	ABC_sub_bind	0.92
PF02796	HTH_7	0.92
PF14235	DUF4337	0.92
PF00571	CBS	0.92
PF00325	Crp	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	5.50
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	5.50
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	2.75
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	1.83
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	1.83
COG5519	Predicted ATPase domain of Cch-like helicases, DUF927 family	General function prediction only [R]	1.83
COG0422	4-amino-2-methyl-5-hydroxymethylpyrimidine (HMP) synthase ThiC	Coenzyme transport and metabolism [H]	0.92
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
All Organisms	root	All Organisms	33.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
cellular organisms	root	All Organisms → cellular organisms	33.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.10 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.43 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.83 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	14.68 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.83 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.92 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	11.01 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.83 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.92 %
Escherichia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.83 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.92 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.92 %
Bradyrhizobium zhanjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	0.92 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.92 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.06 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.83 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.92 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.92 %
Bradyrhizobium zhanjiangense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	0.92 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.92 %
Escherichia coli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005764\|Ga0066903_101749523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	1185	Open in IMG/M
3300005764\|Ga0066903_105186086	Not Available	690	Open in IMG/M
3300005764\|Ga0066903_105342896	Not Available	679	Open in IMG/M
3300005764\|Ga0066903_107894528	Not Available	547	Open in IMG/M
3300005764\|Ga0066903_107923401	Not Available	545	Open in IMG/M
3300005764\|Ga0066903_108582500	Not Available	520	Open in IMG/M
3300016270\|Ga0182036_11132762	Not Available	649	Open in IMG/M
3300016270\|Ga0182036_11201134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	631	Open in IMG/M
3300016270\|Ga0182036_11713789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	531	Open in IMG/M
3300016294\|Ga0182041_10422936	Not Available	1139	Open in IMG/M
3300016294\|Ga0182041_12052673	Not Available	533	Open in IMG/M
3300016319\|Ga0182033_11882692	Not Available	544	Open in IMG/M
3300016341\|Ga0182035_10624957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	933	Open in IMG/M
3300016341\|Ga0182035_11475168	Not Available	612	Open in IMG/M
3300016357\|Ga0182032_10283193	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300016371\|Ga0182034_10354232	Not Available	1192	Open in IMG/M
3300016371\|Ga0182034_11824185	Not Available	536	Open in IMG/M
3300016387\|Ga0182040_10921526	Not Available	725	Open in IMG/M
3300016387\|Ga0182040_10983764	Not Available	703	Open in IMG/M
3300016404\|Ga0182037_10311461	Not Available	1269	Open in IMG/M
3300016404\|Ga0182037_11051248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	711	Open in IMG/M
3300016404\|Ga0182037_11137848	Not Available	684	Open in IMG/M
3300016404\|Ga0182037_12162418	Not Available	501	Open in IMG/M
3300021560\|Ga0126371_12486291	Not Available	627	Open in IMG/M
3300021560\|Ga0126371_12735602	Not Available	598	Open in IMG/M
3300026876\|Ga0207837_1023485	Not Available	511	Open in IMG/M
3300026890\|Ga0207781_1027366	Not Available	557	Open in IMG/M
3300027035\|Ga0207776_1038151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	593	Open in IMG/M
3300027680\|Ga0207826_1021424	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300027703\|Ga0207862_1141250	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300031543\|Ga0318516_10020417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3376	Open in IMG/M
3300031544\|Ga0318534_10352348	Not Available	847	Open in IMG/M
3300031544\|Ga0318534_10443678	Not Available	744	Open in IMG/M
3300031545\|Ga0318541_10429463	Not Available	739	Open in IMG/M
3300031546\|Ga0318538_10700978	Not Available	549	Open in IMG/M
3300031549\|Ga0318571_10303430	Not Available	601	Open in IMG/M
3300031564\|Ga0318573_10814250	Not Available	502	Open in IMG/M
3300031572\|Ga0318515_10195426	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300031573\|Ga0310915_10601399	Not Available	779	Open in IMG/M
3300031668\|Ga0318542_10673846	Not Available	540	Open in IMG/M
3300031680\|Ga0318574_10165068	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300031680\|Ga0318574_10616447	Not Available	636	Open in IMG/M
3300031680\|Ga0318574_10953447	Not Available	503	Open in IMG/M
3300031681\|Ga0318572_10062699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2030	Open in IMG/M
3300031681\|Ga0318572_10471156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	748	Open in IMG/M
3300031682\|Ga0318560_10485917	Not Available	669	Open in IMG/M
3300031719\|Ga0306917_10395484	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300031719\|Ga0306917_10420375	Not Available	1045	Open in IMG/M
3300031723\|Ga0318493_10107014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1410	Open in IMG/M
3300031724\|Ga0318500_10716058	Not Available	511	Open in IMG/M
3300031744\|Ga0306918_10702366	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300031744\|Ga0306918_11484003	Not Available	518	Open in IMG/M
3300031748\|Ga0318492_10210973	Not Available	996	Open in IMG/M
3300031764\|Ga0318535_10371526	Not Available	639	Open in IMG/M
3300031769\|Ga0318526_10204063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	808	Open in IMG/M
3300031770\|Ga0318521_10474993	Not Available	750	Open in IMG/M
3300031777\|Ga0318543_10300007	Not Available	718	Open in IMG/M
3300031781\|Ga0318547_10128408	All Organisms → cellular organisms → Bacteria	1475	Open in IMG/M
3300031781\|Ga0318547_10476777	Not Available	770	Open in IMG/M
3300031792\|Ga0318529_10346643	Not Available	691	Open in IMG/M
3300031796\|Ga0318576_10122274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1202	Open in IMG/M
3300031799\|Ga0318565_10650594	Not Available	506	Open in IMG/M
3300031833\|Ga0310917_10121866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1698	Open in IMG/M
3300031833\|Ga0310917_10182794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1397	Open in IMG/M
3300031833\|Ga0310917_10365176	Not Available	980	Open in IMG/M
3300031845\|Ga0318511_10231896	Not Available	826	Open in IMG/M
3300031860\|Ga0318495_10034498	Not Available	2216	Open in IMG/M
3300031890\|Ga0306925_10351585	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300031890\|Ga0306925_11064639	Not Available	820	Open in IMG/M
3300031890\|Ga0306925_11913004	Not Available	563	Open in IMG/M
3300031893\|Ga0318536_10241907	Not Available	917	Open in IMG/M
3300031910\|Ga0306923_11272496	Not Available	782	Open in IMG/M
3300031910\|Ga0306923_12149647	Not Available	561	Open in IMG/M
3300031910\|Ga0306923_12403391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	522	Open in IMG/M
3300031912\|Ga0306921_10405948	Not Available	1590	Open in IMG/M
3300031912\|Ga0306921_11814852	Not Available	655	Open in IMG/M
3300031912\|Ga0306921_12582020	Not Available	525	Open in IMG/M
3300031942\|Ga0310916_10731849	Not Available	836	Open in IMG/M
3300031942\|Ga0310916_11010200	Not Available	694	Open in IMG/M
3300031942\|Ga0310916_11056870	Not Available	676	Open in IMG/M
3300031942\|Ga0310916_11144949	Not Available	645	Open in IMG/M
3300031945\|Ga0310913_10011594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5296	Open in IMG/M
3300031945\|Ga0310913_10750928	Not Available	689	Open in IMG/M
3300031945\|Ga0310913_11309019	Not Available	502	Open in IMG/M
3300031946\|Ga0310910_10379810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium zhanjiangense	1118	Open in IMG/M
3300031946\|Ga0310910_10496824	Not Available	968	Open in IMG/M
3300031947\|Ga0310909_10085267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2512	Open in IMG/M
3300031947\|Ga0310909_10184378	All Organisms → cellular organisms → Bacteria → Proteobacteria	1729	Open in IMG/M
3300031947\|Ga0310909_10769453	Not Available	797	Open in IMG/M
3300031947\|Ga0310909_11050179	Not Available	664	Open in IMG/M
3300031947\|Ga0310909_11525755	Not Available	531	Open in IMG/M
3300031954\|Ga0306926_10187104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2569	Open in IMG/M
3300031954\|Ga0306926_10623436	Not Available	1315	Open in IMG/M
3300031954\|Ga0306926_11990236	Not Available	654	Open in IMG/M
3300032001\|Ga0306922_11475347	Not Available	681	Open in IMG/M
3300032035\|Ga0310911_10797301	Not Available	546	Open in IMG/M
3300032041\|Ga0318549_10191688	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300032060\|Ga0318505_10044660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1876	Open in IMG/M
3300032076\|Ga0306924_10419671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1531	Open in IMG/M
3300032076\|Ga0306924_10804822	Not Available	1047	Open in IMG/M
3300032076\|Ga0306924_11101485	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300032076\|Ga0306924_11655685	Not Available	672	Open in IMG/M
3300032091\|Ga0318577_10491310	Not Available	585	Open in IMG/M
3300032261\|Ga0306920_101808583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	862	Open in IMG/M
3300033289\|Ga0310914_11580530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	559	Open in IMG/M
3300033290\|Ga0318519_10021041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2919	Open in IMG/M
3300033290\|Ga0318519_10031147	All Organisms → cellular organisms → Bacteria	2519	Open in IMG/M
3300033290\|Ga0318519_10730155	Not Available	607	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.91%
Loam	Environmental → Terrestrial → Soil → Loam	10.09%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	88.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	52.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026876	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 58 (SPAdes)	Environmental	Open in IMG/M
3300026890	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51 (SPAdes)	Environmental	Open in IMG/M
3300027035	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066903_1017495233	3300005764	Tropical Forest Soil	MIDTEQLDRLAETFSTQADYCRHMAEEPDGAFDESWVLLAAAWTELAEETKARSRGSRPN
Ga0066903_1051860861	3300005764	Tropical Forest Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLEAAWTKLAEETKARSRGSRPS*
Ga0066903_1053428962	3300005764	Tropical Forest Soil	MNQMDADRFDELAETYSTQANHCRREAEGPLDPWALLAVAWTKLAEETKARSRGSRPS*
Ga0066903_1078945282	3300005764	Tropical Forest Soil	MTDTDHFDRLAETCSTQADYCHHIAEERGGAFDQPWVLLAAAWTELAEETKSRSCGSRAS
Ga0066903_1079234012	3300005764	Tropical Forest Soil	MTDTEQLDRLAETYSTQADYCRHMAEEPGGAFDEPWVLLAAAWTELAEETKARSRGSRPS
Ga0066903_1085825002	3300005764	Tropical Forest Soil	MTDTDDFDRLAETYSTQADYCRHMAEEPGGAFDEPWVLLAAAWTELAEETKARSRGSRPS
Ga0182036_111327622	3300016270	Soil	GCLWDTSVMNQIDADRFDELAETYSTQADHCRRGAEGPLDPWALLAAAWTKLAEETKARGPGSRPS
Ga0182036_112011341	3300016270	Soil	RLDERAERYSTQADYCRREAEGPLDPWALLAAAWTELAEETKARSRGSRPS
Ga0182036_117137891	3300016270	Soil	MIDTEQLGRLAETYSTQADYCRHMAEEPDGAFDELWVLLATAWTELAEETKARS
Ga0182041_104229361	3300016294	Soil	RFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRPS
Ga0182041_120526731	3300016294	Soil	RFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARGPGSRPS
Ga0182033_118826922	3300016319	Soil	GCLWDTSVMNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRPS
Ga0182035_106249571	3300016341	Soil	FDELAETYSTQADHCRREAEGPLDPWALLAVARTKLAEETKARSRGSRSS
Ga0182035_114751681	3300016341	Soil	MNQIDADRLDERAETYSTQADYCRREAEGPLDPWALLAAAWTELAEETKARSRGLRP
Ga0182032_102831932	3300016357	Soil	MTETEQPDRLAQTYSTQADYCRHMAEEPGGAFDESWVLLAAAWTELAEETKARSRGSRPN
Ga0182034_103542321	3300016371	Soil	KAGGGCLWDTSVMNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARAPGSRPS
Ga0182034_118241852	3300016371	Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTELAEETKARSRGLRPN
Ga0182040_109215261	3300016387	Soil	MTDTEHFDSLAETYSTQADYCRHMAEEPDGAFDELWVLLAAAWTELAEETKAR
Ga0182040_109837641	3300016387	Soil	RFDELAETYSTQADHCRREAEGPLDPWALLAVARTKLAEETKARSRGSRSS
Ga0182037_103114611	3300016404	Soil	MIDTEQLGRLAETYNTQADYCRHMAEEPDGAFDELWVLLASAWTELAEETKARSRESRPN
Ga0182037_110512482	3300016404	Soil	MNQIDADRLDERAETYSKQADYCRREAEGPLDPWMLLATAWTKLAEET
Ga0182037_111378483	3300016404	Soil	FDELAETYNTQADHCRREAEGPLDPWALLAVAWTKLAEETKARSRGSQPS
Ga0182037_121624182	3300016404	Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRG
Ga0126371_124862911	3300021560	Tropical Forest Soil	MTDADQFDRLAETYSTQANYCRHMAEGAGAAFDEPWALLAAAWTELAEETKARSRGSQPN
Ga0126371_127356021	3300021560	Tropical Forest Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRPS
Ga0207837_10234852	3300026876	Tropical Forest Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWAKLAEETKARSRGSRPS
Ga0207781_10273662	3300026890	Tropical Forest Soil	MNQIDADRFDELAETYSTQADQCRREAEGPLDPWALLAAAWTKLAEETKARSRLT
Ga0207776_10381512	3300027035	Tropical Forest Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKVRSRPAARP
Ga0207826_10214243	3300027680	Tropical Forest Soil	TSVMNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKVRSRLAAR
Ga0207862_11412502	3300027703	Tropical Forest Soil	GCLSDTSVMNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKVRSRLAARP
Ga0318516_100204174	3300031543	Soil	MNQIDAGRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRPN
Ga0318534_103523481	3300031544	Soil	MTDTEQLDRLAETYSTQADYCRHMAEEPDGAFDEPWVLLAAAWTELAEE
Ga0318534_104436781	3300031544	Soil	MTETEQPDRLAETYSTQADYCRHMAEEPGGAFDESWVLLAAAWTELAEETKARSRGSRPN
Ga0318541_104294633	3300031545	Soil	IDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRLT
Ga0318538_107009781	3300031546	Soil	LAETFSTQADYCRHMAEEPDGAFDESWVLLAAAWTELAEETKARSRGSRPN
Ga0318571_103034302	3300031549	Soil	TMTETDDFDTLAETYSTQADYCRHMAEEPSGAFDEPWMLLAAAWTELAEETKARSRGSQP
Ga0318573_108142502	3300031564	Soil	TDTEHFDSLAETYSTQADYCRHMAEEPDGAFDELWVLLASAWTELAEETKARSRESRPN
Ga0318515_101954262	3300031572	Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWMLLATAWTKLAEETKVRSRLAARP
Ga0310915_106013993	3300031573	Soil	SLAETYSTQADYCRHMAEEPDGAFDELWVLLASAWTELAEETKARSRESRPN
Ga0318542_106738462	3300031668	Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARGPGSRPS
Ga0318574_101650681	3300031680	Soil	DLKAGGGCLWDTSVMNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKVRSRLAARP
Ga0318574_106164471	3300031680	Soil	MNQIDADRLDERAETYSTQADYCRREAEGPLDPWALLAAAWTELAEETKARSRGLRPN
Ga0318574_109534471	3300031680	Soil	MTDTEQLDRLAETYSTQADYCRHMAEESDGAFDESWVLLAAAWTELAEE
Ga0318572_100626991	3300031681	Soil	MNQIDAGRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRP
Ga0318572_104711562	3300031681	Soil	EQLDRLAETYSTQADYCRHMAEEPDGAFDEPWVLLAAAWTELAEETKARSRGSRPS
Ga0318560_104859172	3300031682	Soil	MIDTEQLGRLAETYSTQADYCRHMAEEPDGAFDELWVLLATAWTELAEETK
Ga0306917_103954841	3300031719	Soil	MTDTDHFDRLAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKVRSRLAARP
Ga0306917_104203751	3300031719	Soil	FDWLAETYSTQADYCRHMAEEPGGAFDEPWVLLAVAWTELAEETKARSRASRPS
Ga0318493_101070141	3300031723	Soil	MNQIDAGRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETK
Ga0318500_107160581	3300031724	Soil	MNQIDADRFDELAETYSTQADYCRHEAEGPLDPWMLLATAWTKLADETKARSGIAA
Ga0306918_107023661	3300031744	Soil	MTDADHFDRLAETYSTQADYCRHMAEEPDGAFDEPWVLLAAAWTELAEETKARSRGSRPS
Ga0306918_114840031	3300031744	Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKVRSRLAARP
Ga0318492_102109732	3300031748	Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAVAWTKLAEETKARSRGSQPSR
Ga0318535_103715261	3300031764	Soil	LWDTSAMNQIDAGRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRPN
Ga0318526_102040631	3300031769	Soil	MNQIDAGRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSR
Ga0318521_104749931	3300031770	Soil	MIDTEQLGRLAETYSTQADYCRHMAEEPDGAFDELWVLLATAWTELAEETKARSRGSRPN
Ga0318543_103000072	3300031777	Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRLT
Ga0318547_101284083	3300031781	Soil	MTDTEQLDRLAETYSTQADYCRHMAEEPDGAFDEPWVLLAAAWTELA
Ga0318547_104767771	3300031781	Soil	MTDTEHFDSLAETYSTQADYCRHMAEEPDGAFDELWVLLASAWTELAEETKARSRESRPN
Ga0318529_103466431	3300031792	Soil	LAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRPN
Ga0318576_101222741	3300031796	Soil	TYSTQADYCRHMAEEPGGAFDEPWVLLAAAWTELAEETKARSRGSRPS
Ga0318565_106505942	3300031799	Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWMLLATAWTKLAEETKGKVPDRGRVDD
Ga0310917_101218661	3300031833	Soil	RVKAGGGCLWDTSVMNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRPS
Ga0310917_101827941	3300031833	Soil	MNQIDADRLDERAETYSTQADYCRREAEGPLDPWALLAAAWTELAEETKARSRGL
Ga0310917_103651762	3300031833	Soil	DERAETYSTQADYCRREAEGPLDPWALLAAAWTELAEETKARSRGLRPN
Ga0318511_102318961	3300031845	Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRSS
Ga0318495_100344981	3300031860	Soil	MTDTEQLDRLAETYSTQADYCRHMAEEPDGAFDEPWVLLAAAWTELAEETKARS
Ga0306925_103515851	3300031890	Soil	AGGGCLSDTSVMNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKVRSRLAARP
Ga0306925_110646391	3300031890	Soil	MIDTEQLGRLAETYNTQADYCRHMAEEPDGAFDELWVLLAAAWTELAEETKARSRGSRPN
Ga0306925_119130041	3300031890	Soil	MNQIDADRLDERAETYSTQADYCRREAEGPLDPWALLAAAWTELAEETKARSRGSRPS
Ga0318536_102419072	3300031893	Soil	FDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRPN
Ga0306923_112724961	3300031910	Soil	ELAETYRTQADHCRREAEGPLDPWALLAVAWTKLAEETKAWGPGSRPS
Ga0306923_121496471	3300031910	Soil	CLWDTSVMNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRPS
Ga0306923_124033911	3300031910	Soil	MTDTDHFDRLAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETK
Ga0306921_104059483	3300031912	Soil	GGCLWDTSVMNQIDADRFDELAETYRTQADHCRREAEGPLDPWALLAVAWTKLAEETKAWGPGSRPS
Ga0306921_118148521	3300031912	Soil	GGCLWDTSVMNQIDADRFDELAETYSTQADHCRREGEGPLDPWALLAAAWTKLAEETKARSRLT
Ga0306921_125820201	3300031912	Soil	MNQIYADRFDELAETYSTLADYCRGEAEGPLDPWMLLATAWTKLAEETEA
Ga0310916_107318491	3300031942	Soil	ETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRPS
Ga0310916_110102002	3300031942	Soil	FDELAETYSTQADQCRREAEGPLDPWALLAAAWTKLAEETKARSRLT
Ga0310916_110568702	3300031942	Soil	MIDTEQLGRLAETYNTQADYCRHMAEEPDGAFDELWVLLAAAWTELAEETKAR
Ga0310916_111449492	3300031942	Soil	MTDTDDFDRLAETYSTQADYCRHMAEEPGGAFDEPWVLLAAWTELAEETKARSRGSRPS
Ga0310913_100115941	3300031945	Soil	MNQIDAGRFDELAETYSTQADHCRREAEGPLDPWALLAAGWTKLAEETKARSRG
Ga0310913_107509281	3300031945	Soil	TSVMNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARGPGSRP
Ga0310913_113090192	3300031945	Soil	TSVMNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRP
Ga0310910_103798102	3300031946	Soil	FDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRPS
Ga0310910_104968242	3300031946	Soil	MTDTDDFDRLAETYSTQADYCRHMAEEPGGAFDEPWVLLAVAWTELAEETKARSRASRPS
Ga0310909_100852672	3300031947	Soil	MNQIDAGRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSGGSRPN
Ga0310909_101843781	3300031947	Soil	RLDERAETYSTQADYCRREAEGPLDPWALLAAAWTELAEETKARSRGSRPS
Ga0310909_107694531	3300031947	Soil	EQPDRLAETYSTQADYCRHMAEEPGGAFDESWVLLAAAWTELAEETKARSRGSRPN
Ga0310909_110501791	3300031947	Soil	FAIGLKMIDTEQLGRLAETYNTQADYCRHMAEEPDGAFDELWVLLAAAWTELAEETKARSRGSRPN
Ga0310909_115257551	3300031947	Soil	MTDTEQLDRLAETYSTQADYCRHMAEEPDGAFDEPWVLLAAAWTELAEETKARSRGSRPS
Ga0306926_101871042	3300031954	Soil	MNQIDADRLDERAETYSTQADYCRREAEGPLDPWALLAAAWTELAEETRARSRGLRPN
Ga0306926_106234361	3300031954	Soil	MNQIDADRFDELAETYRTQADHCRREAEGPLDPWALLAVAWTKLAEETKAWGPGSRPS
Ga0306926_119902362	3300031954	Soil	MTDTDDFDRLAETYSTQADYCRHMAEEPGGAFDEPWVLLAVAWTELAEEIKARSRASRPS
Ga0306922_114753471	3300032001	Soil	MTDTEQLDRLAETYSTQADYCRHMAEEPGGAFDEPWVLLAVAWTELAEETKARSRASRPS
Ga0310911_107973013	3300032035	Soil	DADRFDELAETYSTQADHCRREGEGPLDPWALLAAAWTKLAEETKARSRLT
Ga0318549_101916882	3300032041	Soil	VMNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKVRSRLAARP
Ga0318505_100446603	3300032060	Soil	FDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARGPGSRPS
Ga0318514_101699541	3300032066	Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWMLLATAWTKLAEETKARSGIAAELTIIV
Ga0306924_104196713	3300032076	Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWMLLATAWTKLAEETKARSGIAA
Ga0306924_108048222	3300032076	Soil	KMIDTEQLGRLAETYNTQADYCRHMAEEPDGAFDELWVLLAAAWTELAEETKARSRGSRP
Ga0306924_111014851	3300032076	Soil	KSWRGCLWDTSVMNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKVRSRLAARP
Ga0306924_116556851	3300032076	Soil	LWDTSVMNQIDADRFDELAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRL
Ga0318577_104913103	3300032091	Soil	EQLDRLAETYSTQADYCRHMAEEPGGAFDESWVLLAAAWTELAEETKARSRGSRPN
Ga0306920_1018085832	3300032261	Soil	MKQINAVRLDELAEAYSTQADYCRGMAEESGGTFDEPWVLLAAAWTKLAEETKARSRIAAGLTIF
Ga0310914_115805302	3300033289	Soil	TDHFDRLAETYSTQADHCRREAEGPLDPWALLAAAWTKLAEETKARSRGSRPS
Ga0318519_100210412	3300033290	Soil	MNQIDAGRFDELAETYSTQADHCRREAEEPLDPWALLAAAWTKLAEETKARSRGSRPN
Ga0318519_100311475	3300033290	Soil	MTDTEQLDRLAETYSTQADYCRHMAEEPDGAFDEPWVLLAAAWTELAE
Ga0318519_107301552	3300033290	Soil	MNQIDADRFDELAETYSTQADHCRREAEGPLDPWMLLATAWTKLAEETKARSG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087995

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences