NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F087984

Metagenome Family F087984

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F087984
Family Type Metagenome
Number of Sequences 109
Average Sequence Length 39 residues
Representative Sequence VLGGGSFFYGLGGFDFSYDEVKRAVVIGLIGFFLFIASAA
Number of Associated Samples 5
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Eukaryota
% of genes with valid RBS motifs 96.26 %
% of genes near scaffold ends (potentially truncated) 0.92 %
% of genes from short scaffolds (< 2000 bps) 11.93 %
Associated GOLD sequencing projects 5
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Eukaryota (64.220 % of family members)
NCBI Taxonomy ID 2759
Taxonomy All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza
(100.000 % of family members)
Environment Ontology (ENVO) Unclassified
(100.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(61.468 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 32.35%    β-sheet: 0.00%    Coil/Unstructured: 67.65%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF00078RVT_1 24.00
PF12796Ank_2 6.00
PF03732Retrotrans_gag 2.00
PF14529Exo_endo_phos_2 2.00
PF03358FMN_red 1.00
PF00443UCH 1.00
PF05225HTH_psq 1.00
PF09337zf-H2C2 1.00
PF08583Cmc1 1.00
PF00075RNase_H 1.00
PF02225PA 1.00
PF13650Asp_protease_2 1.00
PF03221HTH_Tnp_Tc5 1.00
PF00076RRM_1 1.00
PF00665rve 1.00
PF14214Helitron_like_N 1.00
PF01636APH 1.00
PF05729NACHT 1.00
PF00098zf-CCHC 1.00
PF00856SET 1.00
PF00850Hist_deacetyl 1.00
PF00385Chromo 1.00
PF05970PIF1 1.00
PF05699Dimer_Tnp_hAT 1.00
PF12271Chs7 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0123Acetoin utilization deacetylase AcuC or a related deacetylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 2.00
COG0507ATPase/5’-3’ helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)Replication, recombination and repair [L] 1.00
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 1.00
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 1.00
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 1.00
COG4584TransposaseMobilome: prophages, transposons [X] 1.00
COG5207Uncharacterized Zn-finger protein, UBP-typeGeneral function prediction only [R] 1.00
COG5533Ubiquitin C-terminal hydrolasePosttranslational modification, protein turnover, chaperones [O] 1.00


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms65.14 %
UnclassifiedrootN/A34.86 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300028786|Ga0307517_10000300All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae85596Open in IMG/M
3300028786|Ga0307517_10000301All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae85521Open in IMG/M
3300028786|Ga0307517_10000320All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae83345Open in IMG/M
3300028786|Ga0307517_10000700All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae57784Open in IMG/M
3300028786|Ga0307517_10001001All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae47909Open in IMG/M
3300028786|Ga0307517_10001001All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae47909Open in IMG/M
3300028786|Ga0307517_10001092All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales45897Open in IMG/M
3300028786|Ga0307517_10001195All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya43790Open in IMG/M
3300028786|Ga0307517_10001216All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes43308Open in IMG/M
3300028786|Ga0307517_10001255All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi42613Open in IMG/M
3300028786|Ga0307517_10001626All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales37302Open in IMG/M
3300028786|Ga0307517_10001652All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya36834Open in IMG/M
3300028786|Ga0307517_10001860All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae34533Open in IMG/M
3300028786|Ga0307517_10002005All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales33131Open in IMG/M
3300028786|Ga0307517_10002210All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina31433Open in IMG/M
3300028786|Ga0307517_10002210All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina31433Open in IMG/M
3300028786|Ga0307517_10002252All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae31136Open in IMG/M
3300028786|Ga0307517_10002327All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii30659Open in IMG/M
3300028786|Ga0307517_10002710All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae28269Open in IMG/M
3300028786|Ga0307517_10003360All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae24911Open in IMG/M
3300028786|Ga0307517_10004023All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales22751Open in IMG/M
3300028786|Ga0307517_10004390Not Available21665Open in IMG/M
3300028786|Ga0307517_10006171All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes17850Open in IMG/M
3300028786|Ga0307517_10006472All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae17325Open in IMG/M
3300028786|Ga0307517_10007827All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes → Morchella sextelata15485Open in IMG/M
3300028786|Ga0307517_10007827All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes → Morchella sextelata15485Open in IMG/M
3300028786|Ga0307517_10007827All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes → Morchella sextelata15485Open in IMG/M
3300028786|Ga0307517_10009778All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella13535Open in IMG/M
3300028786|Ga0307517_10020884Not Available8311Open in IMG/M
3300028786|Ga0307517_10069930Not Available3170Open in IMG/M
3300028786|Ga0307517_10099419Not Available2306Open in IMG/M
3300028786|Ga0307517_10407646Not Available717Open in IMG/M
3300028786|Ga0307517_10544562Not Available581Open in IMG/M
3300028794|Ga0307515_10206747Not Available1820Open in IMG/M
3300028794|Ga0307515_10232557Not Available1632Open in IMG/M
3300028794|Ga0307515_10285731All Organisms → Viruses → Predicted Viral1351Open in IMG/M
3300028794|Ga0307515_10343527Not Available1143Open in IMG/M
3300028794|Ga0307515_10426175Not Available946Open in IMG/M
3300028794|Ga0307515_10497756Not Available830Open in IMG/M
3300028794|Ga0307515_10589957Not Available721Open in IMG/M
3300028794|Ga0307515_10911109Not Available511Open in IMG/M
3300031456|Ga0307513_10000046All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales158222Open in IMG/M
3300031456|Ga0307513_10001460All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae33978Open in IMG/M
3300031456|Ga0307513_10001971All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae29061Open in IMG/M
3300031456|Ga0307513_10002078All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii28128Open in IMG/M
3300031456|Ga0307513_10002526Not Available25287Open in IMG/M
3300031456|Ga0307513_10003416All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae21572Open in IMG/M
3300031456|Ga0307513_10004242All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii19174Open in IMG/M
3300031456|Ga0307513_10004503All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes18588Open in IMG/M
3300031456|Ga0307513_10004886All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella17784Open in IMG/M
3300031456|Ga0307513_10005500All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes16727Open in IMG/M
3300031456|Ga0307513_10006369All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii15433Open in IMG/M
3300031456|Ga0307513_10007548All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae14064Open in IMG/M
3300031456|Ga0307513_10007548All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae14064Open in IMG/M
3300031456|Ga0307513_10012877All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Choiromyces → Choiromyces venosus → Choiromyces venosus 120613-110291Open in IMG/M
3300031456|Ga0307513_10013440All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae10045Open in IMG/M
3300031456|Ga0307513_10026707Not Available6648Open in IMG/M
3300031456|Ga0307513_10029291All Organisms → cellular organisms → Eukaryota → Opisthokonta6280Open in IMG/M
3300031456|Ga0307513_10029291All Organisms → cellular organisms → Eukaryota → Opisthokonta6280Open in IMG/M
3300031456|Ga0307513_10029417Not Available6263Open in IMG/M
3300031456|Ga0307513_10034167All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes5709Open in IMG/M
3300031456|Ga0307513_10035894All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii5540Open in IMG/M
3300031456|Ga0307513_10063064Not Available3912Open in IMG/M
3300031456|Ga0307513_10071405Not Available3623Open in IMG/M
3300031456|Ga0307513_10110967Not Available2736Open in IMG/M
3300031456|Ga0307513_10490092Not Available947Open in IMG/M
3300031507|Ga0307509_10000669All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales58279Open in IMG/M
3300031507|Ga0307509_10003010All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales26349Open in IMG/M
3300031507|Ga0307509_10003045All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae26083Open in IMG/M
3300031507|Ga0307509_10004472All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii20122Open in IMG/M
3300031507|Ga0307509_10004491All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes20058Open in IMG/M
3300031507|Ga0307509_10004820All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes19176Open in IMG/M
3300031507|Ga0307509_10004984All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes18762Open in IMG/M
3300031507|Ga0307509_10005211All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes18217Open in IMG/M
3300031507|Ga0307509_10005311All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales18016Open in IMG/M
3300031507|Ga0307509_10005606All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella17391Open in IMG/M
3300031507|Ga0307509_10006041All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina16510Open in IMG/M
3300031507|Ga0307509_10006679All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae15390Open in IMG/M
3300031507|Ga0307509_10008226All Organisms → cellular organisms → Eukaryota13343Open in IMG/M
3300031507|Ga0307509_10009496All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi12143Open in IMG/M
3300031507|Ga0307509_10015853All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes8761Open in IMG/M
3300031507|Ga0307509_10015868Not Available8753Open in IMG/M
3300031507|Ga0307509_10021252Not Available7343Open in IMG/M
3300031507|Ga0307509_10021252Not Available7343Open in IMG/M
3300031507|Ga0307509_10022511Not Available7101Open in IMG/M
3300031507|Ga0307509_10024056All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Tuber → Tuber borchii6827Open in IMG/M
3300031507|Ga0307509_10073895Not Available3548Open in IMG/M
3300031507|Ga0307509_10141894All Organisms → cellular organisms → Eukaryota → Opisthokonta2335Open in IMG/M
3300031507|Ga0307509_10147939Not Available2270Open in IMG/M
3300033180|Ga0307510_10007277All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales13185Open in IMG/M
3300033180|Ga0307510_10010414All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae11041Open in IMG/M
3300033180|Ga0307510_10013072All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae9846Open in IMG/M
3300033180|Ga0307510_10024800All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes6924Open in IMG/M
3300033180|Ga0307510_10031100All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Choiromyces → Choiromyces venosus → Choiromyces venosus 120613-16036Open in IMG/M
3300033180|Ga0307510_10034648Not Available5650Open in IMG/M
3300033180|Ga0307510_10034648Not Available5650Open in IMG/M
3300033180|Ga0307510_10051096Not Available4376Open in IMG/M
3300033180|Ga0307510_10056921Not Available4065Open in IMG/M
3300033180|Ga0307510_10056921Not Available4065Open in IMG/M
3300033180|Ga0307510_10058168All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda4006Open in IMG/M
3300033180|Ga0307510_10060756Not Available3884Open in IMG/M
3300033180|Ga0307510_10073480All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Morchellaceae → Morchella → Morchella sect. Distantes3387Open in IMG/M
3300033180|Ga0307510_10081348Not Available3141Open in IMG/M
3300033180|Ga0307510_10087140Not Available2990Open in IMG/M
3300033180|Ga0307510_10105333All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → Pezizomycetes → Pezizales → Tuberaceae → Choiromyces → Choiromyces venosus → Choiromyces venosus 120613-12589Open in IMG/M
3300033180|Ga0307510_10202019Not Available1521Open in IMG/M
3300033180|Ga0307510_10231217Not Available1351Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza100.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300028786Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EMHost-AssociatedOpen in IMG/M
3300028794Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EMHost-AssociatedOpen in IMG/M
3300031456Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EMHost-AssociatedOpen in IMG/M
3300031507Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EMHost-AssociatedOpen in IMG/M
3300033180Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EMHost-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0307517_1000030023300028786EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKRAGRRLLIGFLSP
Ga0307517_10000301423300028786EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKRAVVIGLIGFFLFIASAA
Ga0307517_10000320153300028786EctomycorrhizaVLGGGSFFYGLGGFDFAYDEVKRAGRHLLIGFLSP
Ga0307517_1000070083300028786EctomycorrhizaVLGGGGFFYGLGGFDFSYEEVKRAVVIGLIGFFLFIASTA
Ga0307517_10001001353300028786EctomycorrhizaVLGGGSFFYSLRGFDFSYDEVKRAVVIGLTGFFLFIASAA
Ga0307517_10001001423300028786EctomycorrhizaVLGGASFFYGLGGFDCSYDEVKRAVVIGLIGFFLFIVSTA
Ga0307517_10001092193300028786EctomycorrhizaVLGEGGFVYGLAGFDFSYDEVKRAGRRLLIGFLSP
Ga0307517_10001195483300028786EctomycorrhizaVLGGGSFFYGLWGFDFSYDEVKRAGRRLLIGFLSP
Ga0307517_1000121653300028786EctomycorrhizaVLGGGGVFYGLGGFDFSYDEVKWAVVIGLIGIFLFIA
Ga0307517_1000125523300028786EctomycorrhizaVLAWGSFFYGLGRFDFSYDEVKRAVVLGLICFFHFIASAA
Ga0307517_1000162673300028786EctomycorrhizaVLGGGRFFYGLGGFDFSYDEVKRAVVIGLIGFFLLIASAT
Ga0307517_10001652203300028786EctomycorrhizaVLGGGGFFYGLGGFDFSYNEVKRAVVIGLIGFFLFIASAA
Ga0307517_10001860343300028786EctomycorrhizaMGGGFFYGLGGFHFSYEEVKRAVVIGLIGFFLFIASAA
Ga0307517_10002005183300028786EctomycorrhizaVLGWGSFIYGFGGFDFSYDEVKRAVVIGLIGFFLFIASSA
Ga0307517_10002210303300028786EctomycorrhizaVLGRGGFFYGLRGFDLSYDEVKRAVVIGLIGFFLFIASVA
Ga0307517_10002210323300028786EctomycorrhizaVLGGGGFFYGLRGFDFSYDEVKRAVVIGLIGFFLFIASAA
Ga0307517_1000225213300028786EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKRAVGIGLIGFFLFIASAA
Ga0307517_1000232743300028786EctomycorrhizaVLGGGSFFYGLGGFDVSYDEVKRAVVIGLIGFFLLIASAA
Ga0307517_10002710323300028786EctomycorrhizaVLGGGSFFYGLVGFDFSYDEVKRAVVIGLIGFFLFIASAA
Ga0307517_1000336023300028786EctomycorrhizaVLGGGSFFYGLRGFDFSYDEVKRAVVIGLIAFFLFIASAA
Ga0307517_10004023133300028786EctomycorrhizaVLGGGSFFNGLGGFDFSYDEVKRAVVIGLIGFLLFIASAA
Ga0307517_1000439033300028786EctomycorrhizaVLGGGSFFYGVGGFDFSYDKGKPEVVIGLIGFFLFIASAA
Ga0307517_1000617153300028786EctomycorrhizaVLGGGSFFYGLGGFDSSYAELKPVVVIWLIGFVLFIASAV
Ga0307517_1000647223300028786EctomycorrhizaVLGGGSFFYGLRGFDFSYNEVKRAVVIGLIGFFLFIASAA
Ga0307517_10007827163300028786EctomycorrhizaVLGGGSFFFGLGGFDFSYDEVKRAVVIGVIGFFLFIASAA
Ga0307517_10007827173300028786EctomycorrhizaVLGGGSFLYGLGGFDFSYDEVKRAVVIWLIGFFLFIASAA
Ga0307517_1000782773300028786EctomycorrhizaVLGGGSFFYGFRGFDFSYDEVKRAVVIGLIGFFLFIASAA
Ga0307517_10009778113300028786EctomycorrhizaVLAGGSFSYGLGGFDFSYDEVKRGVVIGLIGFFLFIASAA
Ga0307517_1002088433300028786EctomycorrhizaVLGGGSFFYGFGGFDFSYDEVKRAVVIGLIGFFSS
Ga0307517_1006993013300028786EctomycorrhizaVLGGGSFFYGLGGFDFSYDDVKRAVVIGPIVFFLFIASAA
Ga0307517_1009941913300028786EctomycorrhizaVLGGGSFFDGLGGFDFSYDEVKRAGRRLLIGFLSP
Ga0307517_1040764623300028786EctomycorrhizaVLGGGSFFYGLVGFDFSYDEVKWAVVIGLIGFFLFIASAA
Ga0307517_1054456213300028786EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKRAVVTGLIGFFLFLASAA
Ga0307515_1020674723300028794EctomycorrhizaVLGGGGFFYGLGGFDFSYDEVKRAVVIGLIGFFLFIASAA
Ga0307515_1023226223300028794EctomycorrhizaVLGGGDFSYGFGVFDFSHEEVMQAIVIGPIGFVLFIARAA
Ga0307515_1023255733300028794EctomycorrhizaVLGGGSFFSGLRGFDFAYDEVKRAVVIELIGFFLFIASAA
Ga0307515_1028573113300028794EctomycorrhizaVLGGGSFCYGLGGFDFSYDEVKRAVVIGLIGFFLFIASAA
Ga0307515_1034352713300028794EctomycorrhizaVLGWRSFFSGLVGFDFSYDEVKRAVVIGLIGFFLFIASTA
Ga0307515_1042617513300028794EctomycorrhizaVLGGGSFFYSLGGFDFSYDEVKRAVVIGLIGFFLSIASAA
Ga0307515_1049775613300028794EctomycorrhizaVLGGGSFFYGLAGFDFSYDEVKRAPVVIGLIGFFLFIASAA
Ga0307515_1058995713300028794EctomycorrhizaVLGGGGFFYGLGRFDFSYDEVKRAVVIGLIGFFLSIASAA
Ga0307515_1091110913300028794EctomycorrhizaLGGGSFFYGLGGFDFSYDEVKQAVVIGLIAFFLFIASAA
Ga0307513_100000461873300031456EctomycorrhizaVLGRGSFFSDLGGFDFSYDEVKRAVVIGLIGFFLFIASPA
Ga0307513_10001460213300031456EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKRPVVIGLIGFFLFIASAA
Ga0307513_1000197133300031456EctomycorrhizaVLGGGSFFYGLEGFDFSYDEVKRVVVIGLIGFFLFIASAA
Ga0307513_10002078353300031456EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKRAVVIRLIGFFLFIASAA
Ga0307513_1000252653300031456EctomycorrhizaVLGAGSFFYGFGGFDFSYDEVKRAVVIGLIGFFLFIAGAA
Ga0307513_10003416233300031456EctomycorrhizaVLVGGGFFYRLEGFDFSYDEVKRAVVLGLIGFFLFIASAA
Ga0307513_10004242163300031456EctomycorrhizaVLGGGSFFYGVRRFDFSYDEVKRVVVIGPIGCFLFIASAA
Ga0307513_10004503203300031456EctomycorrhizaVLGEGSFFYGLRGFDFSYDEVKRAVVIGLIGFFLFIARAA
Ga0307513_10004886103300031456EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKRAVVIGLIGFFLFLASAA
Ga0307513_1000550013300031456EctomycorrhizaVLGGGSFFYALGGFDFAYDKVKRAVVIGLIGFFVFIASAA
Ga0307513_10006369183300031456EctomycorrhizaMPGGGSFFYGLGGFDFSYDEVKRPVVIGLIGFFLFIASAA
Ga0307513_1000754813300031456EctomycorrhizaVLGGGSFFYGFGGFDFSYDNVKRAGRRLLIGFLSP
Ga0307513_1000754873300031456EctomycorrhizaVLGAGSFFYALGGFDFSYDEVKRAVVIGLIGFFLFIASAA
Ga0307513_1001287713300031456EctomycorrhizaVLGGGGFFYGLGGVDFSYDEVKRAVVIGLIGFFLFIASAA
Ga0307513_10013440133300031456EctomycorrhizaVLGWGSFFYGLGGFDFSYDEVKLAVVIGLIGFFLFIASAA
Ga0307513_1002183833300031456EctomycorrhizaVLGKGGFSYGFGVFDFSHEEVKRAVVVTYRFFLFIACTA
Ga0307513_1002670783300031456EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKGAVVIGLIGFFLFIASAA
Ga0307513_1002929133300031456EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKRAGRRLLISFLSP
Ga0307513_1002929163300031456EctomycorrhizaVLGGGSFFYGLGGFDFSYDKVKRAVVIGLIGFFSLHS
Ga0307513_1002941753300031456EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKRAVVIGLIGFFLFIASTA
Ga0307513_1003416733300031456EctomycorrhizaVLGRGSFFYGLGGFDFSYDDVKRAGRRLLIGFLSP
Ga0307513_1003589463300031456EctomycorrhizaVLGGGSFFYGLGGFDLSYDEVKRAVVIGLIGFFLFIASAA
Ga0307513_1006306433300031456EctomycorrhizaVLCEGGFSYGFGGFDFSYDEVKREGRRLLIGFLSP
Ga0307513_1007140543300031456EctomycorrhizaVLGKGGFSYGFGVFDFSYDEVKRAGGRLLIGFLSQ
Ga0307513_1011096743300031456EctomycorrhizaVLGGGSFFYGLGGCDFSYDEVKRAVVIWLIGFFLFIASAA
Ga0307513_1049009233300031456EctomycorrhizaVLGGGSFFYGLGGFDFSYDKVKRAVVIGLIGFFLFIASAA
Ga0307509_1000066913300031507EctomycorrhizaVLGEGSFFYALGGFDFSYDEVKLAVVIGLIGFFLFIASAA
Ga0307509_10003010213300031507EctomycorrhizaVLGGGSYFYGLVGFDFSYDEVKRAVVIGLIGFFLFIASAP
Ga0307509_10003045253300031507EctomycorrhizaVLGGGSHFYGLGGFHFSYDEVKRAVVIGLIGFFLFRASAA
Ga0307509_10004472123300031507EctomycorrhizaVLGGGSFFDGLRGFDFSYDEVKRAVVIGLIGFFLFTASAP
Ga0307509_10004491223300031507EctomycorrhizaVLGGGGFFYGLGGFDFSYDEVKRAGRRLLIGFLSP
Ga0307509_1000482053300031507EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKRAVVIGLIGFFLSIASAA
Ga0307509_10004984113300031507EctomycorrhizaMYESYVLGGGSLFYGLGGFNFSSDEVKLAVVIGLIGFFLFIASAA
Ga0307509_1000521173300031507EctomycorrhizaVLGGGSFLCGLGGFDFSYDEVKRAVVIGLIGFVLFIASAA
Ga0307509_1000531193300031507EctomycorrhizaVLGEGGFFHGFGGFDFSYDEVKRALVIGPIGFFLFLASAA
Ga0307509_10005606143300031507EctomycorrhizaVLGGGSFFYGLGGFDFSYEEVKQAVVIGLIGFFLFIASAQ
Ga0307509_10006041183300031507EctomycorrhizaVLGGGGFFYGLGGFDFSYDEVKRAVVIGLIGFFLFIASTA
Ga0307509_10006679173300031507EctomycorrhizaMCRRCESYLLGGGSFFYGLEGFDVSYDEVKRVVVIGLIGFFLFIASAA
Ga0307509_1000822613300031507EctomycorrhizaVLGGGCFFYGLGGFDFSYDELKRAIVIGLIGFFLFIARAA
Ga0307509_1000949683300031507EctomycorrhizaVLGGGSFFDGLGGLDFSYDEVKRAGRRLLIGFLSP
Ga0307509_1001585353300031507EctomycorrhizaVLGGGSFIYGLGGFDLTYDEVQRAVVIGLIGFFLFIASAA
Ga0307509_1001586893300031507EctomycorrhizaVIGGGSFFYGLGGFDFSYDEVKRAGRPLLIGFLSP
Ga0307509_1002125233300031507EctomycorrhizaMLGRGSFFYGLGGFDLSYDEVKRAVVIGLLGFFLFIASAA
Ga0307509_1002125293300031507EctomycorrhizaVLGGGSFIYGLAGFDFSHDEVKRAVVIGLIGFFLFIASAA
Ga0307509_1002251113300031507EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKRAVVIGLIGFFLFITSAA
Ga0307509_1002405683300031507EctomycorrhizaVLGGGGFFYGLAGFDFSYDEVKRAGRRLLIGFLSP
Ga0307509_1007389543300031507EctomycorrhizaVLGGGCFFYGFGVFDFSYDEVKRAVVIGLIGFFLFIASAA
Ga0307509_1014189423300031507EctomycorrhizaVLGRGGFFYGLGGFDISYDEVKRAGGRLLIGFLSP
Ga0307509_1014793943300031507EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKRAVVIGFIGFFLFIASTA
Ga0307510_1000727773300033180EctomycorrhizaVPGGGSFFYGLVEFDFSYDEVKRAVVIGLIGFFLFIASAT
Ga0307510_1001041483300033180EctomycorrhizaVLGEGGFFYGLEGFDFSYDEVKRALVIGLIGFFLFIASAA
Ga0307510_1001307213300033180EctomycorrhizaVLGGGSFFYGLGGFDFSYDELKRAVVIGLIGFFLFIASAA
Ga0307510_10024800153300033180EctomycorrhizaVLGGGGFFYGLGGFDFSYDEVKWAVVIGLIGFFLFIASAA
Ga0307510_1003110023300033180EctomycorrhizaVLGGGSFFHGLGGFCFSYDEVKRAVVIGLIGFFLFIASAA
Ga0307510_1003464833300033180EctomycorrhizaVLGGGSFFYGLRGFDFSNDEVKQAVVIGLIGFFLFIASAA
Ga0307510_1003464843300033180EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKRAVVIGLIGFFLLIASAA
Ga0307510_1005109663300033180EctomycorrhizaVLGGGSFFYGLGGFDFSYDQVKRAGRRLLIGFLSP
Ga0307510_1005692153300033180EctomycorrhizaVLGGGRFFYGLAGFDFSYNEVKRAVVIGLIGFFLFIASAA
Ga0307510_1005692173300033180EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKRAGRPLLIGLLSS
Ga0307510_1005816833300033180EctomycorrhizaVLVGGTFFYGLRGFDFSYDEVKRVVVIGLIGFFLFIASPA
Ga0307510_1006075633300033180EctomycorrhizaVLGEGGFFYGLGGFDFSYDEVKRAGRRLLIGFLSP
Ga0307510_1007348043300033180EctomycorrhizaVLGGGNFSYGLGVFDFSHEEVKRAGVIGFIGFFLFIASAA
Ga0307510_1008134833300033180EctomycorrhizaVLGGGSFFYGLGGFHFSYDEVKLALLIGLIGFFLFIASAA
Ga0307510_1008714013300033180EctomycorrhizaVLGGGGFFYGLRGFDFSYDEVKRAVVIGLIGFFLFIVAHTHQQK
Ga0307510_1010533323300033180EctomycorrhizaVLGGGSFFYGLGGFDFSYDEVKWTGRRLFIGFFLSIASAA
Ga0307510_1020201923300033180EctomycorrhizaVLGGGGFFYGLGGFDFSYDELKRAVVIGLIGFVLSIASAA
Ga0307510_1023121713300033180EctomycorrhizaVLGGASFFYGLGGFDFSYDEVKRAVVIGLIGFFLFIASAA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.