Metagenome / Metatranscriptome Family F087958

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087958
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	76 residues
Representative Sequence	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNTNDTLSSTGL
Number of Associated Samples	97
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.82 %
% of genes near scaffold ends (potentially truncated)	35.45 %
% of genes from short scaffolds (< 2000 bps)	91.82 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.909 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (10.909 % of family members)
Environment Ontology (ENVO)	Unclassified (37.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.48% β-sheet: 0.00% Coil/Unstructured: 49.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF08445	FR47	51.82
PF00583	Acetyltransf_1	13.64
PF01896	DNA_primase_S	9.09
PF08241	Methyltransf_11	1.82
PF04679	DNA_ligase_A_C	1.82
PF02597	ThiS	0.91
PF00593	TonB_dep_Rec	0.91
PF13298	LigD_N	0.91
PF06684	AA_synth	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.82
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	0.91
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.91 %
Unclassified	root	N/A	9.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.91 %
Unclassified	root	N/A	9.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.91 %
Unclassified	root	N/A	9.09 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	71.82 %
Unclassified	root	N/A	9.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	70.91 %
Unclassified	root	N/A	9.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.45 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	11.82 %
Unclassified	root	N/A	9.09 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.91 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.91 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	10.91 %
Unclassified	root	N/A	9.09 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.91 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.91 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	10.91 %
Unclassified	root	N/A	9.09 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.91 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.91 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	9.09 %
Unclassified	root	N/A	9.09 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1.82 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.91 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	9.09 %
Unclassified	root	N/A	9.09 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1.82 %
Sphingomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig57313	Not Available	602	Open in IMG/M
2170459017\|G14TP7Y01B65MM	Not Available	619	Open in IMG/M
3300001305\|C688J14111_10156341	Not Available	702	Open in IMG/M
3300001686\|C688J18823_10414028	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300001686\|C688J18823_10528903	Not Available	755	Open in IMG/M
3300001867\|JGI12627J18819_10280980	Not Available	670	Open in IMG/M
3300002568\|C688J35102_118316041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	548	Open in IMG/M
3300002568\|C688J35102_118996177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	623	Open in IMG/M
3300002568\|C688J35102_119193135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300002568\|C688J35102_119942251	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300002568\|C688J35102_120226361	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300002568\|C688J35102_120736344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1450	Open in IMG/M
3300002568\|C688J35102_120927765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2448	Open in IMG/M
3300004463\|Ga0063356_101445435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1015	Open in IMG/M
3300004463\|Ga0063356_102301115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300005328\|Ga0070676_10122870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1632	Open in IMG/M
3300005329\|Ga0070683_100040597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	4279	Open in IMG/M
3300005329\|Ga0070683_102059987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300005330\|Ga0070690_100199146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1393	Open in IMG/M
3300005336\|Ga0070680_101473046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300005337\|Ga0070682_100938945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300005338\|Ga0068868_100066137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2873	Open in IMG/M
3300005340\|Ga0070689_100798801	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300005355\|Ga0070671_100999614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	733	Open in IMG/M
3300005356\|Ga0070674_101409406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300005434\|Ga0070709_10616705	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005437\|Ga0070710_10157628	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300005444\|Ga0070694_100201488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1484	Open in IMG/M
3300005459\|Ga0068867_100288299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1349	Open in IMG/M
3300005547\|Ga0070693_101229735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300005548\|Ga0070665_100967402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	864	Open in IMG/M
3300005577\|Ga0068857_101146557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	752	Open in IMG/M
3300005578\|Ga0068854_101753454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300005615\|Ga0070702_100231921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1241	Open in IMG/M
3300005618\|Ga0068864_100285798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1541	Open in IMG/M
3300005713\|Ga0066905_101071672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	714	Open in IMG/M
3300005719\|Ga0068861_100313804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1363	Open in IMG/M
3300005840\|Ga0068870_10057064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2086	Open in IMG/M
3300006048\|Ga0075363_100713861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300006058\|Ga0075432_10501062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300009094\|Ga0111539_10267700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1989	Open in IMG/M
3300009094\|Ga0111539_10515364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1393	Open in IMG/M
3300009098\|Ga0105245_10215811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1849	Open in IMG/M
3300009148\|Ga0105243_11570170	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300009156\|Ga0111538_13072029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	582	Open in IMG/M
3300009176\|Ga0105242_12263534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300009840\|Ga0126313_11618832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	539	Open in IMG/M
3300010041\|Ga0126312_10666735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	750	Open in IMG/M
3300010371\|Ga0134125_11921815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	643	Open in IMG/M
3300010400\|Ga0134122_10480056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1119	Open in IMG/M
3300010401\|Ga0134121_11192778	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300012212\|Ga0150985_101690516	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300012469\|Ga0150984_103559151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	604	Open in IMG/M
3300012911\|Ga0157301_10148910	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300012958\|Ga0164299_10339102	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300012986\|Ga0164304_10108309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1672	Open in IMG/M
3300012987\|Ga0164307_10405174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1006	Open in IMG/M
3300012988\|Ga0164306_10771472	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300013296\|Ga0157374_10639832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1075	Open in IMG/M
3300013297\|Ga0157378_10326101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1493	Open in IMG/M
3300015077\|Ga0173483_10636282	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300015371\|Ga0132258_12840872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1205	Open in IMG/M
3300015373\|Ga0132257_102481871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	673	Open in IMG/M
3300017792\|Ga0163161_11030987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	704	Open in IMG/M
3300019356\|Ga0173481_10107713	Not Available	1083	Open in IMG/M
3300020081\|Ga0206354_10406144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	594	Open in IMG/M
3300025321\|Ga0207656_10124442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1203	Open in IMG/M
3300025898\|Ga0207692_10500989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	770	Open in IMG/M
3300025901\|Ga0207688_10060008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2142	Open in IMG/M
3300025908\|Ga0207643_10032420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2918	Open in IMG/M
3300025911\|Ga0207654_10746416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	705	Open in IMG/M
3300025915\|Ga0207693_10326554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1201	Open in IMG/M
3300025920\|Ga0207649_10323973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1133	Open in IMG/M
3300025923\|Ga0207681_10948867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	721	Open in IMG/M
3300025924\|Ga0207694_11424288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	585	Open in IMG/M
3300025927\|Ga0207687_10489797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1025	Open in IMG/M
3300025931\|Ga0207644_10415785	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300025933\|Ga0207706_11592561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	529	Open in IMG/M
3300025934\|Ga0207686_10434733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1006	Open in IMG/M
3300025935\|Ga0207709_11592488	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300025944\|Ga0207661_11723885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300025945\|Ga0207679_10662754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	945	Open in IMG/M
3300025981\|Ga0207640_11096083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	704	Open in IMG/M
3300025981\|Ga0207640_12173008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300026078\|Ga0207702_11527140	Not Available	661	Open in IMG/M
3300026095\|Ga0207676_10213880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1712	Open in IMG/M
3300026116\|Ga0207674_11673667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	605	Open in IMG/M
3300027524\|Ga0208998_1050162	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300027530\|Ga0209216_1058788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.	651	Open in IMG/M
3300028379\|Ga0268266_10594945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1062	Open in IMG/M
3300028587\|Ga0247828_10008042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3793	Open in IMG/M
3300028587\|Ga0247828_10654610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	648	Open in IMG/M
3300028705\|Ga0307276_10030290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1119	Open in IMG/M
3300028812\|Ga0247825_11287545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	534	Open in IMG/M
3300028889\|Ga0247827_10808624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	621	Open in IMG/M
3300030336\|Ga0247826_10002070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	6005	Open in IMG/M
3300030336\|Ga0247826_10050370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2318	Open in IMG/M
3300031152\|Ga0307501_10101291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	728	Open in IMG/M
3300031547\|Ga0310887_10178327	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300031548\|Ga0307408_101142867	Not Available	724	Open in IMG/M
3300031824\|Ga0307413_11604499	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300031847\|Ga0310907_10388231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300031995\|Ga0307409_101673857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	665	Open in IMG/M
3300031996\|Ga0308176_11983866	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300032012\|Ga0310902_10490241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	800	Open in IMG/M
3300032013\|Ga0310906_10214366	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300032205\|Ga0307472_101287140	Not Available	703	Open in IMG/M
3300033551\|Ga0247830_10585039	Not Available	883	Open in IMG/M
3300034268\|Ga0372943_0255229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1102	Open in IMG/M
3300034819\|Ga0373958_0201275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.73%
Host-Associated	Host-Associated	46.36%
Engineered	Engineered	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.82%
Plants	Host-Associated → Plants	46.36%
Unclassified	Environmental → Unclassified	0.91%
Solid Waste	Engineered → Solid Waste	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.09%
Unclassified	Environmental → Unclassified → Unclassified	0.91%
Roots	Host-Associated → Plants → Roots	0.91%
Grass	Engineered → Solid Waste → Grass	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.36%
Loam	Environmental → Terrestrial → Soil → Loam	25.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.73%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.91%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.91%
Composting	Engineered → Solid Waste → Grass → Composting	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	10.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	9.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.82%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.91%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	10.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.45%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.73%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.82%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.91%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.91%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027524	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027530	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_01949260	2124908016		LSVMRRRRRSLRELLSDLRLSPEEAAEARAGQCMEALFDQERCACHDLGEHEEAEIEAERRRWDHAQPANTSVTTSSTGR
4ZMR_01247190	2170459017	Switchgrass, Maize And Mischanthus Litter	MRRHRRSLRELIAELRLTPEEREYARSEECMEALFDSERCACGSLGEREEAELEAERRRWAHPSKTNI
C688J14111_101563411	3300001305	Soil	MRRPHRLSQLLAHLRLTPEERDYARAEECMEALFDSPRCACGSLGEREQAELEAERRRWAHVPPSNSSDTV
C688J18823_104140282	3300001686	Soil	MRRRHRSLRELIAELRLSPEERDHARAEECMEALFDSARCACGSLGEREEAEIEAERRRWAHAQPANVSETVSSTGL*
C688J18823_105289032	3300001686	Soil	MRRPHRSLRELIAELHRSPEERFDALAEECMEALFDPVRCSCVRLGEREEAALEAERRRWDHAQPSNTSVTLSSTGL*
JGI12627J18819_102809801	3300001867	Forest Soil	MRWRRRTLRELLAGLRFTPEEAQDARAEHCMEALFDAERCECHAMGEREEAELEAERRRWAHAQSSNTNATLSSTGL
C688J35102_1183160411	3300002568	Soil	MRRRHRTLRELLAEIRRSPDDEAADARAGQCAEALFDQERCACHDLGEREEAALEAERRRWDHVQPANTNVTTSSTGL*
C688J35102_1189961772	3300002568	Soil	MSRRHRTLRELIAELRLSPDEAREARAEECMETLFDSARCACGGLGEREEAEIEAERRRWAHPQPSKDSETLSSTGL*
C688J35102_1191931352	3300002568	Soil	MRRPHRLSQLLAHLRLTPEERDYARAEECMEALFDSPRCACGSLGEREQAELEAERRRWAHVPPSNSSDTVSSTGL*
C688J35102_1199422512	3300002568	Soil	MRRRHRSLRELIAELRLTPEERRDARAEECMETLFDPVRCSCLRLGEREDAAVEAERRRREHPQPSNSSTTLSSTGL*
C688J35102_1202263612	3300002568	Soil	MPGRHRTLRELIACLRLTPDEARDVHAEECMETLFDRERCACADLGEREEAEVEAERRRWAHPQASDASVTQSSTRL*
C688J35102_1207363443	3300002568	Soil	VPRRHRTLRELLAELRLSPEERAEACAEECIEALHDPVRCAAVHLGEREQAELEAQRRRWAQPSNVSTTRSSTGR*
C688J35102_1209277652	3300002568	Soil	MRRRHRTLRELLADLRLSPEEAREARAEECMESLFDSARCACGGLGEREEAEIEAERRRWACAHPPNDSEIVSSTGV*
Ga0063356_1014454352	3300004463	Arabidopsis Thaliana Rhizosphere	MRRRRRTLRELLSELRYTPEEAQDARAGHCMEALFDAERCECHALGEREEAELEAERRRWDHTQSTNTNATLSSSGL*
Ga0063356_1023011152	3300004463	Arabidopsis Thaliana Rhizosphere	MRRRRRTLRELVAGLRLTPDEIDDARVEHCVEALFDRERCECANLGEREEAALEAERRRWDHDHSSNLSTTTSSTGL*
Ga0070676_101228702	3300005328	Miscanthus Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWTHTQSSNTNATLSSTGL*
Ga0070683_1000405973	3300005329	Corn Rhizosphere	MRRRRRSLRELLSDLRLSPEEAAEARAGQCMEALFDQERCACHDLGEHEEAEIEAERRRWDHAQPANTSVTTSSTGR*
Ga0070683_1020599871	3300005329	Corn Rhizosphere	SCPRSNVAFVMHRRRRTLRELLSDVRLSPDEAAEARAGECMEALFDQERCACHDLGEREEAAVEAERRRWDHLQSANTNVTTSSTGR*
Ga0070690_1001991463	3300005330	Switchgrass Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNANDTLSSTGL*
Ga0070680_1014730462	3300005336	Corn Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAEHCMEALFDAERCECHALGEREQAELEAERRRWTHTQPSNANDTLSSTGL*
Ga0070682_1009389451	3300005337	Corn Rhizosphere	AELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWTHTQSSNTNATLSSTGL*
Ga0068868_1000661372	3300005338	Miscanthus Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWTHTQSSNTNATLSSTGP*
Ga0070689_1007988012	3300005340	Switchgrass Rhizosphere	MRRRRRTLRELLAELRYTPEEAQDARAGHCVEALFDAERCECHALGEREQAEIEAERRRWAHTQPSNTNDTLSSTGL*
Ga0070671_1009996142	3300005355	Switchgrass Rhizosphere	MRGRHRTLRELIADLRLSPEEAREARAEECMETLFDSARCACGGLGEREEAEIEAERRRWAHVQDSNTSETASSTGL*
Ga0070674_1014094061	3300005356	Miscanthus Rhizosphere	RAAMRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNANDTLSSTGL*
Ga0070709_106167052	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNTNDTLSSTGL*
Ga0070710_101576282	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRRRTLRELLAELRFTPEEAQDARAGHCVEALFDAERCECHALGEREQAELEAERRRWAHTQSSNTNDTLSSTGL*
Ga0070694_1002014882	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAEIEAERRRWAHTQPSNTNDTLSSTGL*
Ga0068867_1002882991	3300005459	Miscanthus Rhizosphere	AELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNANDTLSSTGL*
Ga0070693_1012297351	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	CPRSNVPSVMRRRRRSLRELLSDLRLSPEEAAEARAGQCMEALFDQERCACHDLGEHEEAEIEAERRRWDHAQPANTSVTTSSTGR*
Ga0070665_1009674022	3300005548	Switchgrass Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAEIEAERRRWAHTQPSNTNDTLSSSGL*
Ga0068857_1011465572	3300005577	Corn Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCVEALFDAERCECHALGEREQAEIEAERRRWAHTQPSNTNDTLSSTGL*
Ga0068854_1017534541	3300005578	Corn Rhizosphere	AAMRRRRRTLRELLAELRFTPEEAQDARAEHCMEALFDAERCECHALGEREQAELEAERRRWTHTQPSNANDTLSSTGL*
Ga0070702_1002319212	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRRRRRSLRELLSDLRLSPEEAAEARAGQCMEALFDQERCACHDLGEHEEAEIEAERRRWDHAQPANTSVTTSSTGW*
Ga0068864_1002857981	3300005618	Switchgrass Rhizosphere	RELLAELRFTPEEAQDARAEHCMEALFDAERCECHALGEREQAELEAERRRWTHTQPSNANDTLSSTGL*
Ga0066905_1010716722	3300005713	Tropical Forest Soil	MRRRRRTLRELLAKLRYTPEEAQDARAEQCMEALFDAERCECHALGEREEAELEAERRRWAHTQSSNTNATLSSTGL*
Ga0068861_1003138043	3300005719	Switchgrass Rhizosphere	GPSCRLCSSFPRSNLARVMRRHRRSLRELIAELRLTPEEREYARSEECMETLFDSARCACGSLGEREQAELEAERRRWAHTPPSNSSTTLSSTGL*
Ga0068870_100570644	3300005840	Miscanthus Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWTHTQPSNANDTLSSTGL*
Ga0075363_1007138611	3300006048	Populus Endosphere	SCRLCSSFPRSNVDGVMRRRRRTLRELLTELRFTPEEAQDARAGQCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNTNDTLSSTGL*
Ga0075432_105010622	3300006058	Populus Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERVALAALGEREQAELEAERRRWAHTQSSNANDTLSSTGL*
Ga0111539_102677002	3300009094	Populus Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARTGHCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNANDTLSSTGL*
Ga0111539_105153642	3300009094	Populus Rhizosphere	MRRRRRTLRELLAGLRFTPDEAQDARADHCMEALFDAERCECHAMGEREEAELEAERRRWAHAQSSNTNATLSSTGL*
Ga0105245_102158111	3300009098	Miscanthus Rhizosphere	MRRRRRTLRELLAELRYTPEEAQDARAGHCVEALFDAERCECHALGEREQAEIEAERRRWAHTQPSNTNDTLSSSGL*
Ga0105243_115701702	3300009148	Miscanthus Rhizosphere	MQRRRRTLRELLADLRLSPEEAEDARAEHCVEALFDRERCECANLGEREEAAVEAERRRWVQPHPSNISTTRSSTGL*
Ga0111538_130720292	3300009156	Populus Rhizosphere	MGRHRTLRELIAELRLSPDEAREARAEECMEALFDSARCSCGSLGEREEAEIEAERRRWAQPSKTNITVSSTGL*
Ga0105242_122635342	3300009176	Miscanthus Rhizosphere	MRPRRRSLRELLADLRLSPEEAEDARGEHCVEALFDRERCECANLGEREEAAVEAERRRWVQPHPSNISTTRSSTGL*
Ga0126313_116188321	3300009840	Serpentine Soil	RSLRELIAELRLTPEEAREARAEECMESLFDSARCACGSLGEREEAEIEAERRRWAQPAGSNASETLSSTGL*
Ga0126312_106667352	3300010041	Serpentine Soil	MRLRHRTLRELLAALRLSPEERSDARAEECMEALFDPERCACVRLGEREQAALEVERRRWAQGQRSNANATRSPTGR*
Ga0134125_119218151	3300010371	Terrestrial Soil	MRRRRRTLRELLAELRYTPEEAQDARAGHCVEALFDAERCECHALGEREQAELEAERRRWTHTQSSNTNATLSSTG
Ga0134122_104800562	3300010400	Terrestrial Soil	MRRRRRSLRELLSDLRLSPEEAAEARAGQCMEALFDQERCACHDLGEREEAAVEAERRRWDHLQSANTNVTTSSTGR*
Ga0134121_111927782	3300010401	Terrestrial Soil	MRRRRRTLRELLAELRFTPEEAQDARAEHCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNANDTLSSTGL*
Ga0150985_1016905162	3300012212	Avena Fatua Rhizosphere	MSRRHRTLRELIAELRLSPDEAREARAEECMETLFDSARCACGGLGEREEAEIEAERRRWAHPQPPKDSETMSSTGL*
Ga0150984_1035591512	3300012469	Avena Fatua Rhizosphere	MSRRHRTLRELIAELRLSPDEAREARAEECMETLFDSARCACGGLGEREEAEIEAERRRWACAHPPNDSEIVSSTGV*
Ga0157301_101489102	3300012911	Soil	MRRHRRSLRELIAELRLTPEEREYARSEECMETLFDSARCACGSLGEREQAELEAERRRWAHTPPSNSSTTLSSTGL*
Ga0164299_103391022	3300012958	Soil	MRWRHRTLRELLAELRFTPDEAQDARADHCMEALFDAERCECHALGEREQAELDAERRRWDHTQSSNTNATLSSTGL*
Ga0164304_101083092	3300012986	Soil	MRWRHRTLRELFAELRFTPEEAQDARAEHCVEALFDAERCECHALGEREQAELDAERRRWDHTQSSNTNATLSSTGL*
Ga0164307_104051742	3300012987	Soil	MRRRRRTLRELLAELRYTPEEAQDARAGHCMEALFDAERCECHALGEREQAEIEAERRRWAHTQPSNTNDTLSSTGL*
Ga0164306_107714722	3300012988	Soil	MRWRHRTLRELLAELRFTPDEAQDARADHCMEALFDAERCECHALGEREQAELDAERRRWDHSQSSNTNATLSSTGL*
Ga0157374_106398321	3300013296	Miscanthus Rhizosphere	MRRRRRTLRELLAELRFTPAEAQDARAGHCMEALFDAERCECHALGERAQAELEAERRRWAHTQSSNANDTLSSTGL*
Ga0157378_103261012	3300013297	Miscanthus Rhizosphere	MRRRRRTLRELLAELRYTPEEAQDARAGHCVEALFDAERCECHALGEREQAELEAERRRWTHTQSSNTNATLSSTGL*
Ga0173483_106362822	3300015077	Soil	MRRRRRSLRELLSDLRLSPDEAAEARAGQCMEALFDQERCACHDLGEHEEAEIEAERRRWDHAQPANTSVTTSSTGR*
Ga0132258_128408722	3300015371	Arabidopsis Rhizosphere	MRRRRRTLRELLAELRYTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNTNDTLSSTGL*
Ga0132257_1024818712	3300015373	Arabidopsis Rhizosphere	MRRRRRTLRELLAELRYTPEEARDARAGQCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNTNDTLSSTGL*
Ga0163161_110309871	3300017792	Switchgrass Rhizosphere	RELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWTHTQSSNTNATLSSTGL
Ga0173481_101077132	3300019356	Soil	MRRRRRSLRELLSDLRLSPDEAAEARAGQCMEALFDQERCACHDLGEHEEAEIEAERRRWDHAQPANTSVTT
Ga0206354_104061442	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNANDTLSSTGL
Ga0207656_101244421	3300025321	Corn Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWTHTQSSNTNATL
Ga0207692_105009891	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LLAELRFTPEEAQDARAGHCVEALFDAERCECHALGEREQAELEAERRRWAHTQSSNTNDTLSSTGL
Ga0207688_100600082	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWTHTQSSNTNATLSSTGL
Ga0207643_100324205	3300025908	Miscanthus Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAEHCMEALFDAERCECHALGEREQAELEAERRRWTHTQPSNANDTLSSTGL
Ga0207654_107464162	3300025911	Corn Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWAHTQ
Ga0207693_103265541	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LRELLAELRFTPEEAQDARAGHCVEALFDAERCECHALGEREQAELEAERRRWAHTQSSNTNDTLSSTGL
Ga0207649_103239732	3300025920	Corn Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCVEALFDAERCECHALGEREQAELEAERRRWTHTQSSNTNATLSSTGL
Ga0207681_109488671	3300025923	Switchgrass Rhizosphere	TLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNANDTLSSTGL
Ga0207694_114242882	3300025924	Corn Rhizosphere	NVPSVMRRRRRSLRELLSDLRLSPEEAAEARAGQCMEALFDQERCACHDLGEHEEAEIEAERRRWDHAQPANTSVTTSSTGR
Ga0207687_104897971	3300025927	Miscanthus Rhizosphere	LRYTPEEAQDARAGHCGEALFDAERCECHALGEREQAEIEAERRRWAHTQPSNTNDTLSSSGL
Ga0207644_104157852	3300025931	Switchgrass Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWTHTQPSNANDTLSSTGL
Ga0207706_115925611	3300025933	Corn Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWAHTQSS
Ga0207686_104347332	3300025934	Miscanthus Rhizosphere	PRSNVRAAMRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWTHTQSSNTNATLSSTGL
Ga0207709_115924882	3300025935	Miscanthus Rhizosphere	MQRRRRTLRELLADLRLSPEEAEDARAEHCVEALFDRERCECANLGEREEAAVEAERRRWVQPHPSNISTTRSSTGL
Ga0207661_117238852	3300025944	Corn Rhizosphere	MRRRRRTLRELLAELRYTPEEAQDARAGHCVEALFDAERCECHALGEREQAELEAERRRWTHTQPSNANDTLSSTGL
Ga0207679_106627542	3300025945	Corn Rhizosphere	MRRRRRTLRELLAELRFTPEEAQDARAEHCMEALFDAERCECHALGEREQAEIEAERRRWAHTQPSNTNDTLSSTGL
Ga0207640_110960832	3300025981	Corn Rhizosphere	RRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWTHTQSSNTNATLSSTGL
Ga0207640_121730082	3300025981	Corn Rhizosphere	DLRLSPEEAEDARAEHCVEALFDRERCECANLGEREEAAVEAERRRWVQPHPSNISTTRSSTGL
Ga0207702_115271401	3300026078	Corn Rhizosphere	MRRRRRSLRELLSDLRLSPEEAAEARAGQCMEALFDQERCACHDLGEHEEAEIEAERRRWDHAQPANTSVT
Ga0207676_102138801	3300026095	Switchgrass Rhizosphere	RELLAELRFTPEEAQDARAEHCMEALFDAERCECHALGEREQAELEAERRRWTHTQPSNANDTLSSTGL
Ga0207674_116736671	3300026116	Corn Rhizosphere	MRRRRRTLRELLAELRYTPEEAQDARAGHCVEALFDAERCECHALGEREQAEIEAERRRWAHTQPSN
Ga0208998_10501622	3300027524	Forest Soil	MRPRRRSLRELLADLRLTPEEFEDARAEHCVEALFDRERCECANLGEREEAEIEAERRRWVQPHPSSNISTTRSSTGL
Ga0209216_10587882	3300027530	Forest Soil	MRWRRRTLRELLAGLRFTPEEAQDARAEHCMEALFDRERCECHSLGEREEAEIEAERRRWVQPHPSNISTTRSSSGL
Ga0268266_105949452	3300028379	Switchgrass Rhizosphere	LRELLTELRYTPEEAQDARAGHCMEALFDAERCECHALGEREQAEIEAERRRWAHTQSSNANDTLSSTGL
Ga0247828_100080424	3300028587	Soil	MRRRRRTLRELLVELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWTHTQPSNTNATLSSTGL
Ga0247828_106546102	3300028587	Soil	MRRHRRSLRELIAELRLTPEEREYARSEECMETLFDSARCACGSLGEREQAELEAERRRWAHTPPSNSSTTLSSTGL
Ga0307276_100302902	3300028705	Soil	MRRRHRSLRELIGELRLTPEERVDARAEECMEALFDPARCACSRLGEREEAEVEAERRRWAHDQPSNSSTTLSSTGL
Ga0247825_112875452	3300028812	Soil	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNANDTLSSTGLYARLGYRPVEDS
Ga0247827_108086242	3300028889	Soil	MRRRRPTLRELIAHLRLTPEEARDARAEHCIEALFDAERCECHNLGEREEAGIEAERRRWTGAQPPNSSTTVSSTGR
Ga0247826_100020705	3300030336	Soil	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWAHTQS
Ga0247826_100503702	3300030336	Soil	MRPRRRSLRELLADLRLSPEEAEDARGEHCVEALFDRERCECANLGEREEAAIEAERRRWVQPHPSNSSTTRSSTGL
Ga0307501_101012912	3300031152	Soil	MRPRRRSLRELLADLRLSPEEAEDARGEHCVEALFDRERCECANLGEREEAALEAERRRWVQPHPSNSSTTRSSTGL
Ga0310887_101783272	3300031547	Soil	MRRRRRTLRELLAGLRFTPEEAQDARAGHCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNANDTLSSTGL
Ga0307408_1011428672	3300031548	Rhizosphere	MRRRHRTLRELIAALRLTPEEAREARAEECMESLFDSARCACGGLGEREEAEIEAERRRWAQSNDSETLSSTGL
Ga0307413_116044992	3300031824	Rhizosphere	MRRRHRSLRELIAELRLTPEEAREARAEECMESLFDSARCACGSLGEREEAEIEAERRRWAQPAGSNASETLSSTGL
Ga0310907_103882311	3300031847	Soil	LCSSFPRSNVRAAMRRRRRTLRELLAELRFTPEEAQDARAGQCMEALFDAERCECHAIGEREQAELEAERRRWAHTQSSNTNDTLSSTGL
Ga0307409_1016738572	3300031995	Rhizosphere	MRRRRRTLRELLADLRLSPEERFDARADACMEVLFDPERCRCTDLGEHQEAVLEAERRRWAGAQPEKVSTTRSSTGR
Ga0308176_119838662	3300031996	Soil	MRRRPRLSELLAHLRLTPEEREYARAEECMETLFDSARCACGSLGEREQAELEAERRRWAHEAPSNSSETMSSSGL
Ga0310902_104902412	3300032012	Soil	RRRTLRELLTELRFTPEEAQDARAGQCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNTNDTLSSTGL
Ga0310906_102143662	3300032013	Soil	MRRRRRTLRELLAELRFTPEEAQDARAGQCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNTNDTLSSTGL
Ga0307472_1012871401	3300032205	Hardwood Forest Soil	MRRRRRTLRELLAELRFTPEEAQDARAGHCMEALFDAERCECHALGQREQAELEAERRRWAHTQSSNANDTL
Ga0247830_105850392	3300033551	Soil	RRSLRELLADLRLSPEEAEDARGEHCVEALFDRERCECANLGEREEAAIEAERRRWVQPHPSNSSTTRSSTGL
Ga0372943_0255229_132_365	3300034268	Soil	MRRRHRSLRELIAELRLTPEERLDARAEECMESLFDPARCSCVRLGEREEAAVEAERRRWDHVESSNSSTTLSSTGL
Ga0373958_0201275_199_432	3300034819	Rhizosphere Soil	MRRRRRTLRELLAELRFTPDEAQDARADHCMEALFDAERCECHALGEREQAELEAERRRWAHTQSSNTNDTLSSTGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087958

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences