Metagenome / Metatranscriptome Family F087939

Basic Information
Family ID	F087939
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	47 residues
Representative Sequence	DVAASPVPTAKGHADSLDRPGLGIDVDEDRVRQHRVAIATRNVA
Number of Associated Samples	100
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.82 %
% of genes near scaffold ends (potentially truncated)	98.18 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Bacteria (83.636 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (8.182 % of family members)
Environment Ontology (ENVO)	Unclassified (34.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.455 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.50% β-sheet: 0.00% Coil/Unstructured: 87.50%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00753	Lactamase_B	7.27
PF03797	Autotransporter	6.36
PF13531	SBP_bac_11	4.55
PF11937	DUF3455	3.64
PF00496	SBP_bac_5	2.73
PF10518	TAT_signal	2.73
PF12833	HTH_18	1.82
PF13683	rve_3	1.82
PF06035	Peptidase_C93	1.82
PF13379	NMT1_2	1.82
PF05853	BKACE	0.91
PF00015	MCPsignal	0.91
PF02894	GFO_IDH_MocA_C	0.91
PF14525	AraC_binding_2	0.91
PF08240	ADH_N	0.91
PF02738	MoCoBD_1	0.91
PF02518	HATPase_c	0.91
PF03775	MinC_C	0.91
PF08448	PAS_4	0.91
PF00528	BPD_transp_1	0.91
PF03992	ABM	0.91
PF01717	Meth_synt_2	0.91
PF00392	GntR	0.91
PF13578	Methyltransf_24	0.91
PF17167	Glyco_hydro_36	0.91
PF13085	Fer2_3	0.91
PF03401	TctC	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	1.82
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	1.82
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.91
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.91
COG0850	Septum site-determining protein MinC	Cell cycle control, cell division, chromosome partitioning [D]	0.91
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.91
COG3246	Uncharacterized conserved protein, DUF849 family	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.64 %
Unclassified	root	N/A	16.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.64 %
Unclassified	root	N/A	16.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.64 %
Unclassified	root	N/A	16.36 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.64 %
Unclassified	root	N/A	16.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	59.09 %
Unclassified	root	N/A	16.36 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	46.36 %
Unclassified	root	N/A	16.36 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.82 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.91 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	16.36 %
Unclassified	root	N/A	16.36 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	1.82 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.91 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.91 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.91 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.36 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	14.55 %
Jannaschia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Jannaschia	1.82 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.91 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.91 %
Azorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium	0.91 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.91 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.36 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.64 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.82 %
unclassified Jannaschia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Jannaschia → unclassified Jannaschia	1.82 %
Bradyrhizobium uaiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium uaiense	0.91 %
Microvirga rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga rosea	0.91 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.91 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.91 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.91 %
Azorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium	0.91 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.91 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.36 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	3.64 %
Jannaschia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Jannaschia → unclassified Jannaschia → Jannaschia sp.	1.82 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.82 %
Bradyrhizobium uaiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium uaiense	0.91 %
Microvirga rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga rosea	0.91 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.91 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.91 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.91 %
Azorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium	0.91 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.91 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111006\|2214567195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	527	Open in IMG/M
3300001398\|JGI20207J14881_1060728	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300002077\|JGI24744J21845_10009989	All Organisms → cellular organisms → Bacteria	1947	Open in IMG/M
3300003990\|Ga0055455_10201235	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300004062\|Ga0055500_10147990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	554	Open in IMG/M
3300004480\|Ga0062592_101020633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga rosea	758	Open in IMG/M
3300004480\|Ga0062592_102633512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Jannaschia → unclassified Jannaschia → Jannaschia sp.	508	Open in IMG/M
3300005295\|Ga0065707_10478162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300005334\|Ga0068869_101084534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	700	Open in IMG/M
3300005335\|Ga0070666_10057875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2620	Open in IMG/M
3300005335\|Ga0070666_11381540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	526	Open in IMG/M
3300005344\|Ga0070661_100526282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	949	Open in IMG/M
3300005355\|Ga0070671_100020200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5428	Open in IMG/M
3300005542\|Ga0070732_10259923	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300005546\|Ga0070696_101132983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300005546\|Ga0070696_101397218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Jannaschia → unclassified Jannaschia → Jannaschia sp.	597	Open in IMG/M
3300005614\|Ga0068856_100443634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1318	Open in IMG/M
3300005614\|Ga0068856_100909513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	899	Open in IMG/M
3300005764\|Ga0066903_104039725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	786	Open in IMG/M
3300005983\|Ga0081540_1057416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1882	Open in IMG/M
3300006028\|Ga0070717_10842752	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300006042\|Ga0075368_10541638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	522	Open in IMG/M
3300006052\|Ga0075029_101260822	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300006237\|Ga0097621_102057930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	546	Open in IMG/M
3300006579\|Ga0074054_11785075	Not Available	665	Open in IMG/M
3300006638\|Ga0075522_10392809	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300006845\|Ga0075421_102704197	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300006871\|Ga0075434_102009231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	583	Open in IMG/M
3300009101\|Ga0105247_10588029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	824	Open in IMG/M
3300009101\|Ga0105247_10783800	Not Available	726	Open in IMG/M
3300009167\|Ga0113563_11671158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	755	Open in IMG/M
3300009662\|Ga0105856_1102305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium	837	Open in IMG/M
3300009762\|Ga0116130_1058593	Not Available	1214	Open in IMG/M
3300010046\|Ga0126384_10331468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1262	Open in IMG/M
3300010359\|Ga0126376_12743232	Not Available	542	Open in IMG/M
3300010361\|Ga0126378_12009845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	659	Open in IMG/M
3300010376\|Ga0126381_100964136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1229	Open in IMG/M
3300010396\|Ga0134126_12169965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	606	Open in IMG/M
3300010398\|Ga0126383_10773976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1042	Open in IMG/M
3300010401\|Ga0134121_10816946	Not Available	897	Open in IMG/M
3300011427\|Ga0137448_1057540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	995	Open in IMG/M
3300011442\|Ga0137437_1118242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	911	Open in IMG/M
3300011444\|Ga0137463_1116230	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300012363\|Ga0137390_10477691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1221	Open in IMG/M
3300012363\|Ga0137390_11218462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	700	Open in IMG/M
3300012891\|Ga0157305_10001825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2512	Open in IMG/M
3300012948\|Ga0126375_10416887	Not Available	976	Open in IMG/M
3300012964\|Ga0153916_11532159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	742	Open in IMG/M
3300012986\|Ga0164304_10395922	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300012987\|Ga0164307_11486990	Not Available	572	Open in IMG/M
3300012988\|Ga0164306_10678396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	816	Open in IMG/M
3300013104\|Ga0157370_10583448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1024	Open in IMG/M
3300014321\|Ga0075353_1242193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	500	Open in IMG/M
3300014325\|Ga0163163_10434485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1372	Open in IMG/M
3300014838\|Ga0182030_11272520	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300015077\|Ga0173483_10277317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	810	Open in IMG/M
3300015164\|Ga0167652_1090086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium uaiense	503	Open in IMG/M
3300015190\|Ga0167651_1079223	Not Available	651	Open in IMG/M
3300015203\|Ga0167650_1017921	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300015372\|Ga0132256_100218442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1961	Open in IMG/M
3300015373\|Ga0132257_103933165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	540	Open in IMG/M
3300017936\|Ga0187821_10199996	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300017936\|Ga0187821_10434909	Not Available	542	Open in IMG/M
3300017973\|Ga0187780_10213353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1347	Open in IMG/M
3300018058\|Ga0187766_10845158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	642	Open in IMG/M
3300018070\|Ga0184631_10278639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	693	Open in IMG/M
3300021560\|Ga0126371_11223548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	887	Open in IMG/M
3300022553\|Ga0212124_10365883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	760	Open in IMG/M
3300023067\|Ga0247743_1006823	All Organisms → cellular organisms → Bacteria → Proteobacteria	1346	Open in IMG/M
3300024056\|Ga0124853_1275428	All Organisms → cellular organisms → Bacteria	2234	Open in IMG/M
3300025326\|Ga0209342_10466328	Not Available	1058	Open in IMG/M
3300025457\|Ga0208850_1023548	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300025464\|Ga0208076_1074705	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300025527\|Ga0208714_1007232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2961	Open in IMG/M
3300025560\|Ga0210108_1126812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	516	Open in IMG/M
3300025725\|Ga0209638_1013250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4211	Open in IMG/M
3300025817\|Ga0210144_1042050	All Organisms → cellular organisms → Bacteria → Proteobacteria	1408	Open in IMG/M
3300025829\|Ga0209484_10051215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	900	Open in IMG/M
3300025862\|Ga0209483_1307643	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300025888\|Ga0209540_10238991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1059	Open in IMG/M
3300025900\|Ga0207710_10558005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	597	Open in IMG/M
3300025900\|Ga0207710_10579398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	586	Open in IMG/M
3300025900\|Ga0207710_10710165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	527	Open in IMG/M
3300025931\|Ga0207644_10023544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4220	Open in IMG/M
3300025942\|Ga0207689_11610388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	540	Open in IMG/M
3300026048\|Ga0208915_1031984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	500	Open in IMG/M
3300026053\|Ga0208422_1032664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	626	Open in IMG/M
3300026273\|Ga0209881_1157284	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300026344\|Ga0256800_1005947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	657	Open in IMG/M
3300026717\|Ga0207526_101413	Not Available	714	Open in IMG/M
3300027000\|Ga0207803_1005042	Not Available	2015	Open in IMG/M
3300027517\|Ga0209113_1014706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1006	Open in IMG/M
3300027854\|Ga0209517_10268839	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300028381\|Ga0268264_10688071	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300029907\|Ga0311329_10762245	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300031152\|Ga0307501_10209405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	562	Open in IMG/M
3300031232\|Ga0302323_101424277	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300031724\|Ga0318500_10046425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1825	Open in IMG/M
3300031847\|Ga0310907_10170246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1017	Open in IMG/M
3300032003\|Ga0310897_10002861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4576	Open in IMG/M
3300032017\|Ga0310899_10215502	Not Available	857	Open in IMG/M
3300032075\|Ga0310890_10118115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1698	Open in IMG/M
3300032722\|Ga0316231_1061629	Not Available	1983	Open in IMG/M
3300032782\|Ga0335082_11001910	Not Available	700	Open in IMG/M
3300032782\|Ga0335082_11444039	Not Available	559	Open in IMG/M
3300032783\|Ga0335079_11245610	Not Available	746	Open in IMG/M
3300033158\|Ga0335077_11935774	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300033475\|Ga0310811_10015390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10001	Open in IMG/M
3300033513\|Ga0316628_103519224	Not Available	565	Open in IMG/M
3300034195\|Ga0370501_0308390	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.36%
Host-Associated	Host-Associated	23.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.00%
Plants	Host-Associated → Plants	23.64%
Aquatic	Environmental → Aquatic	16.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.73%
Freshwater	Environmental → Aquatic → Freshwater	8.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.18%
Sediment	Environmental → Aquatic → Sediment	4.55%
Marine	Environmental → Aquatic → Marine	3.64%
Roots	Host-Associated → Plants → Roots	2.73%
Peat	Environmental → Terrestrial → Peat	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.36%
Loam	Environmental → Terrestrial → Soil → Loam	6.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.82%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.91%
Lake	Environmental → Aquatic → Freshwater → Lake	0.91%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.00%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	8.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.64%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.64%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.64%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.82%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.91%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.91%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	8.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.36%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.55%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.64%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.73%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.73%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.91%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.91%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.91%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.91%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.91%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.91%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.91%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.91%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.91%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300001398	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012	Environmental	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004062	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqA_D2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015164	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015190	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4a, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025817	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025829	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026048	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026053	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300026344	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 C5	Environmental	Open in IMG/M
3300026717	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A2-12 (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027517	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032722	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18027	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087939

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2213611604	2209111006	Arabidopsis Rhizosphere	DVAASPVPTAKGHADSLDRPGLGIDVDEDRVRQHRVAIATRNVA
JGI20207J14881_10607282	3300001398	Arctic Peat Soil	IPNIHWALTMTHTALAADVTATPVPTARGHADSLDRPGLGVEVDMDCVNRHRVHIAVRDVA*
JGI24744J21845_100099891	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	DIAKSPLPTGKGFAESLDRPGLGIEVDEDRVSRHRVQIAARSVA*
Ga0055455_102012352	3300003990	Natural And Restored Wetlands	TAQPLPTAQGHADVLDRPGLGVEVDEERVRAHRVAIEVRELA*
Ga0055500_101479902	3300004062	Natural And Restored Wetlands	TGLAEDVAVSPIPTAKGHVDSLDRPGLGVDVDEAQIRRHRVAIATRNVA*
Ga0062592_1010206332	3300004480	Soil	EDVARSPLPTGKGFAETLDRPGLGIEVDEDRVRRHRVQIATRSVA*
Ga0062592_1026335121	3300004480	Soil	LTHFGLAEDVAVSAIPAAGGHVDILDRPGLGVDVDEDRVRHHRVAIATRNVA*
Ga0065707_104781622	3300005295	Switchgrass Rhizosphere	FGLAEDVAVSAIPTAGGHVDILDRPGLGVDVDEDRVRHHRVAIATRNVA*
Ga0068869_1010845341	3300005334	Miscanthus Rhizosphere	NIGWALTLTHFGLAEDVAVSAIPTAGGHVDILDRPGLGVDVDEDRVRHHRVAIATRNVA*
Ga0070666_100578751	3300005335	Switchgrass Rhizosphere	SPVPTAKGHADSLDRPGLGIDVDEDCVRQHRVAIATRNVA*
Ga0070666_113815401	3300005335	Switchgrass Rhizosphere	SLPTGKGFAESLDRPGLGVDVDEDRVRRHRVQITARSVA*
Ga0070661_1005262821	3300005344	Corn Rhizosphere	THLGLAEDVAKSSLPTGKGFAESLDRPGLGVDVDEDRIRRHRVQITARSVA*
Ga0070671_1000202001	3300005355	Switchgrass Rhizosphere	HTGIADDVVTQPIPTARGHVDSLDRPGLGVDVDEDAVRRYRVTIAARNVA*
Ga0070732_102599231	3300005542	Surface Soil	ACVIPNIAWGLTLTHLALAEDVTAQPLATARGHAESIDRPGLGINVDEDRVRAHRVAIAARNVA*
Ga0070696_1011329833	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	GLAEDVAASPVPTAKGHADSLDRPGLGIDVDEDRVRQHRVAIATRNVA*
Ga0070696_1013972181	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	WALTLTHFGLAEDVAVSAIPAAGGHVDILDRPGLGVDVDEDRVRHHRVAIATRNVA*
Ga0068856_1004436343	3300005614	Corn Rhizosphere	IPTARGHVESLERPGLGVDVDEDLVRRHRVEVTAREFA*
Ga0068856_1009095133	3300005614	Corn Rhizosphere	GKGFAESLDRPGLGVDVDEDRIRRHRVQITARSVA*
Ga0066903_1040397251	3300005764	Tropical Forest Soil	EDVAVHPVPTGKGHAESLDRPGLGIDVDEDRVRRHRVPIAGRNVA*
Ga0081540_10574161	3300005983	Tabebuia Heterophylla Rhizosphere	HTGLAEDISAAPIPTANGHVQVLERPGLGVDVDENRVRGHAVAISARNIA*
Ga0070717_108427521	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GIADDIVTQPIPTAKGHVNSLDQPGLGIDVDEDLVRRHRVMIAARDVA*
Ga0075368_105416381	3300006042	Populus Endosphere	DVAKSSLPTGKGFAESLDRPGLGVDVDEDRIRRHRVQITARSVA*
Ga0075029_1012608222	3300006052	Watersheds	AWALTLTHIALAEDVTAQPIQTARGHVDSIDRPGLGIDVDENSVRRHRVQIASRAVA*
Ga0097621_1020579301	3300006237	Miscanthus Rhizosphere	LPTGKGFAESLDRPGLGVDVDEDRVRRHRVQITARSVA*
Ga0074054_117850752	3300006579	Soil	HLGLAEDIAKSPLPTGKGFADSLDRPGIGIEVDEDRVRRHRVQIAARSVA*
Ga0075522_103928092	3300006638	Arctic Peat Soil	TAQPLATARGHVEALDRPGLGIDVDDEHVRRHRVAIPSRNVA*
Ga0075421_1027041971	3300006845	Populus Rhizosphere	GELTEDVTAQPIRIHQGHADILERPGLGIDVDEDRVRRYRVGSPSRYVA*
Ga0075434_1020092312	3300006871	Populus Rhizosphere	KGHADSLDRPGLGIDVDEDCVRQHRVAIATRNVA*
Ga0105247_105880293	3300009101	Switchgrass Rhizosphere	AASPVPTAKGHADSLDRPGLGIDVDEDRVRQHRVAIATRNVA*
Ga0105247_107838003	3300009101	Switchgrass Rhizosphere	VPTAKGHADNLDHPGLGIDVDEDRVRQHRVAIATRNVA*
Ga0113563_116711581	3300009167	Freshwater Wetlands	VTAQPVPTGKGYADSLDRPGLGIDIDEDRVRHHRVQIATRNVA*
Ga0105856_11023052	3300009662	Permafrost Soil	KGFAESLDRPGLGIDVDEDRVRRHRVPIAARSTV*
Ga0116130_10585932	3300009762	Peatland	LAEDVTAQPIRTARGHVDAIDRPGLGIDVDEDRVRRHRVAIPTRNVA*
Ga0126384_103314681	3300010046	Tropical Forest Soil	GLAEDVARSPLPTGKGHAESLDRPGLGVDVDEDRVSRHRVQIAARSVA*
Ga0126376_127432321	3300010359	Tropical Forest Soil	VPTARGHVEVDSLDGPGLGIDVDEDRVHRYRVVIGTHNVA*
Ga0126378_120098452	3300010361	Tropical Forest Soil	AAALHAASVVPNIKWGLTLTHTGLADDVVTLPVPTAKGHVESLERSGLGINVDEDRIRGYRVHIAAKNIA*
Ga0126381_1009641363	3300010376	Tropical Forest Soil	AVHPVPTGKGHAESLDRPGLGIDVDEDRVRRHRVPIAGRNVA*
Ga0134126_121699652	3300010396	Terrestrial Soil	LTLTHTSLAEDVTAQPIATLRGHAERIERPGLGIDVDEDRVRRHRVQIATRNVA*
Ga0126383_107739762	3300010398	Tropical Forest Soil	VAVHPVPAGKGHAESLDRPGLGIDVDEDRVRRHRVPIASRNVA*
Ga0134121_108169462	3300010401	Terrestrial Soil	LTHTGIADDIVTQPIPTAKGHVNSRDQPGLGIDVDEDLVRRHRVMIAARDVA*
Ga0137448_10575402	3300011427	Soil	IPNIAWGLTLTHTSLGEDVTAQPVPTGQGFADSLDRPGLGVDVDEDRVRRHPVQIAARNVA*
Ga0137437_11182421	3300011442	Soil	EDVTAQPVPTGQGHADSLDRPGLGVDVDEDRVRRHRVQIAARNVA*
Ga0137463_11162301	3300011444	Soil	TGLAEDVVASPLATAKGHVQGLDRPGLGVDVDEDRVRRHRVAIATRNVV*
Ga0137390_104776911	3300012363	Vadose Zone Soil	VASVIPNIAWGLTLTHTGLAEDVAVSPVPTAKGHVDSLERPGLGVDIDENRVRRHRVAIAARNVA*
Ga0137390_112184621	3300012363	Vadose Zone Soil	AWGLTLTHTGLAEDVVVSPLPTAKGHVEDLDQPGLGVDVDENRVRCHRVAIATRNVAR*
Ga0157305_100018251	3300012891	Soil	KSPLPTGKGFAESLDRPGLGIEVDEDRVSRHRVQIAARSVA*
Ga0126375_104168871	3300012948	Tropical Forest Soil	VLPNIDWGLTLTHTGLAEDISAWPIPIVIGHVDVLERPGLGVDTDEDRVRRHRIAIGTRNVA*
Ga0153916_115321591	3300012964	Freshwater Wetlands	LGEDVTAQPIRTAQGHVESLDRPGLGVDVDEDRVRRHRVQIATRNVA*
Ga0164304_103959221	3300012986	Soil	EDVAASPVPTAKGHADSLDRPGLGIDVDEDCVRQHRVAIATRNVA*
Ga0164307_114869902	3300012987	Soil	TAQPIPTAKGHVDGLDRPGLGVDVDDDRIRRHRVAMAARNVA*
Ga0164306_106783961	3300012988	Soil	QPIPTARGHVESLERPGLGVDVDEDLVRRHRVEVTAREFA*
Ga0157370_105834482	3300013104	Corn Rhizosphere	AWALTLTHTGLAADVTAQPIPTARGHVESLERPGLGVDVDEDLVRRHRVEVTAREFA*
Ga0075353_12421931	3300014321	Natural And Restored Wetlands	TLTHVGLAEDIAKSPLPTGKGFVESLDRPGLGIEVDEDRVRRHRVQIAAQSVA*
Ga0163163_104344852	3300014325	Switchgrass Rhizosphere	TGIADDVVTQPIPTAGGHVDSLDRPGLGVDVDEDVVRRYRVTIAVRNVA*
Ga0182030_112725201	3300014838	Bog	LATGKGYAESIDRPGLGIDVDEDRVRRHRVPIAGRDLA*
Ga0173483_102773171	3300015077	Soil	IGWALTLTHFGLAEDVAVSAIPAAGGHVDILDRPGLGVDVDEDRVRHHRVAIATRNVA*
Ga0167652_10900862	3300015164	Glacier Forefield Soil	DVTGHPVPTAHGQVECLDRPGLGVEVDEDRVRHHRVQIGS*
Ga0167651_10792232	3300015190	Glacier Forefield Soil	ALGEDVTAHPIATGHGHVDGLDRPGLGIGVDEDRVRRHRVAIATRNVA*
Ga0167650_10179212	3300015203	Glacier Forefield Soil	ITAQPIPTGQGHVETLDRPGLGVDVDEDRVRRHRVQIAPRNVA*
Ga0132256_1002184423	3300015372	Arabidopsis Rhizosphere	THTGIADDVVTQPIPTARGHVDSLDRPGLGVDVDEDVVRRYRVGIAARNVA*
Ga0132257_1039331651	3300015373	Arabidopsis Rhizosphere	AIPTAGGHVDILDRPGLGVDVDEDRVRHHRVAIATRNVA*
Ga0187821_101999961	3300017936	Freshwater Sediment	LTHSGLAEDVTAQPIRADRGHADSIERPGLGIEVDEDCVQRHRVPIAARHVA
Ga0187821_104349091	3300017936	Freshwater Sediment	THIGLAEDVTAQPVRNARGHVEGIDRPGLGIDVDEDRVQRHRVQIAARNVA
Ga0187780_102133531	3300017973	Tropical Peatland	GLTLTHTGLAEDVTAQPIPTARGHVDSLDRPGLGIDVDEDRVRRHRVTIAARNVA
Ga0187766_108451582	3300018058	Tropical Peatland	GLTLTHTGLAEDVAISPLPTAKGHVDGLDRPGLGVDVDEECVRRHQVLGRE
Ga0184631_102786392	3300018070	Groundwater Sediment	TAQPVPTANGHVDCLNRPGLGVEVDEDRVRRHRVPIATRNVA
Ga0126371_112235482	3300021560	Tropical Forest Soil	PVPTGKGHAESLDRPGLGIDVDEDRVRRHRVPIASRNVA
Ga0212124_103658832	3300022553	Freshwater	VIPNIAWGLTLTHTALDEDITAQPIQTAKGHVESLERPGLGVDIDEDRVRRHRVQIATRNVA
Ga0247743_10068231	3300023067	Soil	PTGKGFAESLDRPGLGIEVDEDRVSRHRVQIAARSVA
Ga0124853_12754284	3300024056	Freshwater Wetlands	VTAQPLPTANGHVASLDRPGLGVDVDEDRVRQHRVHIAARNVA
Ga0209342_104663282	3300025326	Soil	TAQPVPTANGNVDCLDRPGLGVEIDENRVRRHRVQIATRNVA
Ga0208850_10235481	3300025457	Arctic Peat Soil	PIRTDKGHADSIDRPGLGIEVDEDRVRRHRVQIATRNVA
Ga0208076_10747051	3300025464	Arctic Peat Soil	QPIPTARGHVDGFDRPGLGVDVDDDLVRRHRVPIATRNVA
Ga0208714_10072323	3300025527	Arctic Peat Soil	EDVTAQPLATARGHAEALDRPGLGIDVDDEHVRRRRVAIPTRNVA
Ga0210108_11268122	3300025560	Natural And Restored Wetlands	EDVATSPLPTGKGFAESLDRPGLGIEVDEDRVRRHRVQIAARASPRHVA
Ga0209638_10132505	3300025725	Arctic Peat Soil	MIRQSLTHTGLAQDVTAQPIAIVQGHVESLDRPGLGIDVDEDRVRRHRVPVATRNMA
Ga0210144_10420501	3300025817	Natural And Restored Wetlands	PVPTAKGHVARLDRPGLGIEVDEERVQRHRVPIAAREVA
Ga0209484_100512151	3300025829	Arctic Peat Soil	GEDVTAQPIPTARGHVESLDRPGLGIDVDEDRVRRHRVPIATRSLA
Ga0209483_13076431	3300025862	Arctic Peat Soil	TAQPLATARGHVEALDRPGLGIDVDDEHVRRHRVAIPSRNVA
Ga0209540_102389913	3300025888	Arctic Peat Soil	ARGQVESLDRPGLGIDVDEDRVRRHRVPIVMRNMA
Ga0207710_105580051	3300025900	Switchgrass Rhizosphere	ASPVPTAKGHADSLDRPGLGIDVDEDRVRQHRVAIATRNVA
Ga0207710_105793982	3300025900	Switchgrass Rhizosphere	HTGLAEDVAASPVPTAKGHADSLDRPGLGIDVDEDCVRQHRVAIATRNVA
Ga0207710_107101651	3300025900	Switchgrass Rhizosphere	TGIADDVVTQPIPTARGHVDSLDRPGLGVDVDEDAVRRYRVTIAARNVA
Ga0207644_100235449	3300025931	Switchgrass Rhizosphere	HTGIADDVVTQPIPTARGHVDSLDRPGLGVDVDEDAVRRYRVTIAARNVA
Ga0207689_116103881	3300025942	Miscanthus Rhizosphere	PNIGWALTLTHFGLAEDVAVSAIPTAGGHVDILDRPGLGVDVDEDRVRHHRVAIATRNVA
Ga0208915_10319841	3300026048	Natural And Restored Wetlands	TLTHVGLAEDIAKSPLPTGKGFVESLDRPGLGIEVDEDRVRRHRVQIAAQSVA
Ga0208422_10326642	3300026053	Natural And Restored Wetlands	EDVATSPLPTGKGFAESLDRPGLGIEVDEDRVRRHRVQIAARSVA
Ga0209881_11572841	3300026273	Soil	PIPTGQGHVDTLDRPGLGVDVDEDRVRRHRVHIPARQVA
Ga0256800_10059471	3300026344	Sediment	IGLAEDVATQPLPTAKGHADSLDRPGLGIDVDENRVRRHRVGISTRNVA
Ga0207526_1014131	3300026717	Soil	GLAEDIAKSPLPTGKGFAESLDRPGLGIEVDEDRVSRHRVQIAARSVA
Ga0207803_10050421	3300027000	Tropical Forest Soil	LAEDVTAQPVPTANGHTACLDRPGLGVEVDEDRVRRHRVQIAARNVA
Ga0209113_10147062	3300027517	Forest Soil	LTLTHTALGEDVTGHPIPTARGHVEGLDRPGLGVVVDEDRVRRHRVQIAAREMA
Ga0209517_102688393	3300027854	Peatlands Soil	TLTHSGLAEDVTAQPILTDKDHADSIERPGLGIEVDEDRVRRHRVQIATRNVA
Ga0268264_106880711	3300028381	Switchgrass Rhizosphere	VAASPVPTAKGHADSLDRPGLGIDVDEDCVRQHRVAIATRNVA
Ga0311329_107622452	3300029907	Bog	IAWGLTLTHTSLGEDVTAQPLATGKGYAESLDRPGLGVDVDDDRVRRHRVHIAARDVA
Ga0307501_102094052	3300031152	Soil	DVTARPIVTARGHVEGLDGPGLGVDVDEDRVRRHRVRIAARNVA
Ga0302323_1014242771	3300031232	Fen	PIPTARGHVELIDRPGLGVDVDEDRVRRSRIGIAARAVR
Ga0318500_100464251	3300031724	Soil	TKGFVDSLDRPGLGVDVDEDAVRRHRVTIAARNVA
Ga0310907_101702461	3300031847	Soil	LTLTHFGLAEDVAVSAIPAAGGHVNILDRPGLGVDVDEDRVRHHRVAIATRNVA
Ga0310897_100028611	3300032003	Soil	LTHFGLAEDVAVSAIPAAGGHVNILDRPGLGVDVDEDRVRHHRVAIATRNVA
Ga0310899_102155022	3300032017	Soil	IAGDVVTRPIPTARGHVDSLDRPGLGVDVDEDVVRRYRVAIAARNVA
Ga0310890_101181151	3300032075	Soil	WALTLTHFGLAEDVAVSAIPAAGGHVNILDRPGLGVDVDEDRVRHHRVAIATRNVA
Ga0316231_10616291	3300032722	Freshwater	TAKPIPTANGHVELVDRPGLGVDVDEDRVRHHRIPITARSVA
Ga0335082_110019101	3300032782	Soil	VVASPTPTAKGHADSLERPGLGVDVDENRVRRHRVAIATRNVA
Ga0335082_114440392	3300032782	Soil	PTARGHVEVLDRPGLGIEVDEARVHAHRVAIGVRDVA
Ga0335079_112456101	3300032783	Soil	TLTHTALAEDVTALPIETARGHVDRMDRPGLGIDVDEDRVRRHRVTIASRNVA
Ga0335077_119357741	3300033158	Soil	AEDVTAQPVATARGHVETLDRPGLGIEVDIDRVNRHRVDIASRAVA
Ga0310811_100153901	3300033475	Soil	IPTARGHVESLDRPGLGVIVDEDRVRRHRVPIATREMA
Ga0316628_1035192242	3300033513	Soil	LTLTHTALGEDVTARPIPTVRGHVESLDRPGLGVVVDEERVRHNRVPIAARNIA
Ga0370501_0308390_446_571	3300034195	Untreated Peat Soil	AKPLVTGKGFAESLDRLGLGIDVDEDRVRRHRVAIAARNVT

Hidden Markov Model


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