Metagenome Family F087918

Basic Information
Family ID	F087918
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	50 residues
Representative Sequence	MVMVLPFLLGLVAALLAVGGRRNAALGLGLITVLVQVWWLVYHATDKLAVSL
Number of Associated Samples	95
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.09 %
% of genes near scaffold ends (potentially truncated)	28.18 %
% of genes from short scaffolds (< 2000 bps)	81.82 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Most Common Taxonomy
Group	Bacteria (90.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (10.909 % of family members)
Environment Ontology (ENVO)	Unclassified (39.091 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.273 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.75% β-sheet: 0.00% Coil/Unstructured: 41.25%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF02600	DsbB	41.82
PF00496	SBP_bac_5	30.91
PF00582	Usp	10.00
PF03129	HGTP_anticodon	1.82
PF04073	tRNA_edit	0.91
PF03597	FixS	0.91
PF07549	Sec_GG	0.91
PF00749	tRNA-synt_1c	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1495	Disulfide bond formation protein DsbB	Posttranslational modification, protein turnover, chaperones [O]	41.82
COG0124	Histidyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.82
COG0423	Glycyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	1.82
COG0441	Threonyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.82
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.82
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.91
COG0341	Preprotein translocase subunit SecF	Intracellular trafficking, secretion, and vesicular transport [U]	0.91
COG0342	Preprotein translocase subunit SecD	Intracellular trafficking, secretion, and vesicular transport [U]	0.91
COG3197	Cytochrome oxidase maturation protein, CcoS/FixS family	Posttranslational modification, protein turnover, chaperones [O]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	89.09 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	29.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.91 %
Unclassified	root	N/A	10.00 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.00 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.45 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.45 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	10.00 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.82 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886012\|MBSR1b_contig_1491420	All Organisms → cellular organisms → Bacteria → Proteobacteria	1092	Open in IMG/M
3300000550\|F24TB_13219851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	757	Open in IMG/M
3300001431\|F14TB_101184723	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300003995\|Ga0055438_10005832	All Organisms → cellular organisms → Bacteria → Proteobacteria	2311	Open in IMG/M
3300004072\|Ga0055512_10071699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	659	Open in IMG/M
3300005093\|Ga0062594_100387824	All Organisms → cellular organisms → Bacteria → Proteobacteria	1120	Open in IMG/M
3300005328\|Ga0070676_10098453	All Organisms → cellular organisms → Bacteria → Proteobacteria	1803	Open in IMG/M
3300005330\|Ga0070690_101529936	Not Available	539	Open in IMG/M
3300005331\|Ga0070670_102185491	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300005347\|Ga0070668_100415328	All Organisms → cellular organisms → Bacteria → Proteobacteria	1151	Open in IMG/M
3300005354\|Ga0070675_100824670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	848	Open in IMG/M
3300005367\|Ga0070667_100304522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1435	Open in IMG/M
3300005367\|Ga0070667_100388934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1268	Open in IMG/M
3300005367\|Ga0070667_102164581	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300005440\|Ga0070705_101588088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300005459\|Ga0068867_100166963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1740	Open in IMG/M
3300005471\|Ga0070698_100632439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1011	Open in IMG/M
3300005518\|Ga0070699_101146373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	713	Open in IMG/M
3300005539\|Ga0068853_100929169	All Organisms → cellular organisms → Bacteria → Proteobacteria	836	Open in IMG/M
3300005549\|Ga0070704_100474608	All Organisms → cellular organisms → Bacteria → Proteobacteria	1081	Open in IMG/M
3300005719\|Ga0068861_102396745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	530	Open in IMG/M
3300005841\|Ga0068863_100055415	All Organisms → cellular organisms → Bacteria → Proteobacteria	3754	Open in IMG/M
3300005937\|Ga0081455_10986796	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300006642\|Ga0075521_10094182	All Organisms → cellular organisms → Bacteria → Proteobacteria	1367	Open in IMG/M
3300006755\|Ga0079222_10944573	All Organisms → cellular organisms → Bacteria → Proteobacteria	731	Open in IMG/M
3300006881\|Ga0068865_101268787	Not Available	654	Open in IMG/M
3300006954\|Ga0079219_10859027	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300007521\|Ga0105044_10111169	All Organisms → cellular organisms → Bacteria → Proteobacteria	3031	Open in IMG/M
3300007799\|Ga0105049_10734296	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300009098\|Ga0105245_12547992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	565	Open in IMG/M
3300009131\|Ga0115027_10410191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	950	Open in IMG/M
3300009527\|Ga0114942_1480608	Not Available	512	Open in IMG/M
3300009545\|Ga0105237_10591399	All Organisms → cellular organisms → Bacteria → Proteobacteria	1117	Open in IMG/M
3300009870\|Ga0131092_10092715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3621	Open in IMG/M
3300009870\|Ga0131092_10124261	All Organisms → cellular organisms → Bacteria → Proteobacteria	2936	Open in IMG/M
3300009870\|Ga0131092_10161891	All Organisms → cellular organisms → Bacteria → Proteobacteria	2431	Open in IMG/M
3300009870\|Ga0131092_10163924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2409	Open in IMG/M
3300010400\|Ga0134122_10992772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	822	Open in IMG/M
3300011438\|Ga0137451_1127912	Not Available	787	Open in IMG/M
3300012900\|Ga0157292_10133660	All Organisms → cellular organisms → Bacteria → Proteobacteria	774	Open in IMG/M
3300013308\|Ga0157375_10331289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1687	Open in IMG/M
3300014266\|Ga0075359_1156895	Not Available	515	Open in IMG/M
3300014326\|Ga0157380_11003117	All Organisms → cellular organisms → Bacteria → Proteobacteria	868	Open in IMG/M
3300015360\|Ga0163144_10414339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1595	Open in IMG/M
3300015371\|Ga0132258_10888090	All Organisms → cellular organisms → Bacteria → Proteobacteria	2250	Open in IMG/M
3300015373\|Ga0132257_102852030	Not Available	630	Open in IMG/M
3300015374\|Ga0132255_105427045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300017792\|Ga0163161_10511898	All Organisms → cellular organisms → Bacteria → Proteobacteria	979	Open in IMG/M
3300017974\|Ga0187777_10363531	All Organisms → cellular organisms → Bacteria → Proteobacteria	996	Open in IMG/M
3300018052\|Ga0184638_1031157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1923	Open in IMG/M
3300018075\|Ga0184632_10270957	All Organisms → cellular organisms → Bacteria → Proteobacteria	739	Open in IMG/M
3300018081\|Ga0184625_10204977	All Organisms → cellular organisms → Bacteria → Proteobacteria	1033	Open in IMG/M
3300018469\|Ga0190270_11956457	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300018476\|Ga0190274_10016039	All Organisms → cellular organisms → Bacteria → Proteobacteria	4788	Open in IMG/M
3300018476\|Ga0190274_11028559	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300018476\|Ga0190274_11976688	Not Available	679	Open in IMG/M
3300018476\|Ga0190274_13155101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	554	Open in IMG/M
3300020057\|Ga0163151_10136473	All Organisms → cellular organisms → Bacteria → Proteobacteria	1533	Open in IMG/M
3300020167\|Ga0194035_1023249	All Organisms → cellular organisms → Bacteria → Proteobacteria	2328	Open in IMG/M
3300020186\|Ga0163153_10007486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	11739	Open in IMG/M
(restricted) 3300021517\|Ga0224723_1061088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1290	Open in IMG/M
3300022213\|Ga0224500_10328823	All Organisms → cellular organisms → Bacteria → Proteobacteria	553	Open in IMG/M
3300022756\|Ga0222622_10699233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	737	Open in IMG/M
3300025321\|Ga0207656_10082324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1448	Open in IMG/M
3300025878\|Ga0209584_10107840	All Organisms → cellular organisms → Bacteria → Proteobacteria	1031	Open in IMG/M
3300025901\|Ga0207688_10518033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	748	Open in IMG/M
3300025907\|Ga0207645_10599870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	748	Open in IMG/M
3300025914\|Ga0207671_11151762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300025925\|Ga0207650_10768273	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300025925\|Ga0207650_11843670	Not Available	511	Open in IMG/M
3300025926\|Ga0207659_10276361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1372	Open in IMG/M
3300025926\|Ga0207659_10302678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1314	Open in IMG/M
3300025938\|Ga0207704_10959743	All Organisms → cellular organisms → Bacteria → Proteobacteria	721	Open in IMG/M
3300025942\|Ga0207689_10000421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	39749	Open in IMG/M
3300025945\|Ga0207679_10490147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1095	Open in IMG/M
3300025986\|Ga0207658_10016691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5053	Open in IMG/M
3300025986\|Ga0207658_10104954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2221	Open in IMG/M
3300025986\|Ga0207658_11332356	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300025986\|Ga0207658_11985739	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300026023\|Ga0207677_10584314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	978	Open in IMG/M
3300026121\|Ga0207683_11317457	All Organisms → cellular organisms → Bacteria → Proteobacteria	668	Open in IMG/M
3300026142\|Ga0207698_11885220	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300027775\|Ga0209177_10433945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300027850\|Ga0209591_10180292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1721	Open in IMG/M
3300027870\|Ga0209023_10022650	All Organisms → cellular organisms → Bacteria → Proteobacteria	5327	Open in IMG/M
3300027871\|Ga0209397_10248091	All Organisms → cellular organisms → Bacteria → Proteobacteria	836	Open in IMG/M
3300027878\|Ga0209181_10123390	All Organisms → cellular organisms → Bacteria → Proteobacteria	2474	Open in IMG/M
3300027900\|Ga0209253_10150184	All Organisms → cellular organisms → Bacteria → Proteobacteria	1886	Open in IMG/M
3300028379\|Ga0268266_10025166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5066	Open in IMG/M
3300028381\|Ga0268264_10341715	All Organisms → cellular organisms → Bacteria → Proteobacteria	1422	Open in IMG/M
3300028587\|Ga0247828_10091815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1419	Open in IMG/M
3300028587\|Ga0247828_10511495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	716	Open in IMG/M
3300028870\|Ga0302254_10174754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	790	Open in IMG/M
3300029987\|Ga0311334_11329615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	605	Open in IMG/M
3300030294\|Ga0311349_10960414	All Organisms → cellular organisms → Bacteria → Proteobacteria	802	Open in IMG/M
3300031521\|Ga0311364_10760526	Not Available	973	Open in IMG/M
3300031938\|Ga0308175_100109908	All Organisms → cellular organisms → Bacteria → Proteobacteria	2561	Open in IMG/M
3300031938\|Ga0308175_102902853	Not Available	535	Open in IMG/M
3300031939\|Ga0308174_11387818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300032164\|Ga0315283_10695290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1096	Open in IMG/M
3300032256\|Ga0315271_10435363	All Organisms → cellular organisms → Bacteria → Proteobacteria	1103	Open in IMG/M
3300032456\|Ga0335394_10029599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6091	Open in IMG/M
3300032954\|Ga0335083_10003728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	19615	Open in IMG/M
3300033408\|Ga0316605_10989155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300033418\|Ga0316625_101330104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	668	Open in IMG/M
3300033807\|Ga0314866_079436	Not Available	571	Open in IMG/M
3300034126\|Ga0370486_013573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1803	Open in IMG/M
3300034156\|Ga0370502_0060683	All Organisms → cellular organisms → Bacteria → Proteobacteria	1193	Open in IMG/M
3300034195\|Ga0370501_0255277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300034281\|Ga0370481_0121266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	891	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.18%
Host-Associated	Host-Associated	38.18%
Engineered	Engineered	3.64%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	38.18%
Terrestrial	Environmental → Terrestrial	35.45%
Aquatic	Environmental → Aquatic	22.73%
Wastewater	Engineered → Wastewater	3.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	31.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.27%
Freshwater	Environmental → Aquatic → Freshwater	15.45%
Sediment	Environmental → Aquatic → Sediment	4.55%
Peat	Environmental → Terrestrial → Peat	3.64%
Activated Sludge	Engineered → Wastewater → Activated Sludge	3.64%
Marine	Environmental → Aquatic → Marine	2.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	16.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.09%
Lake	Environmental → Aquatic → Freshwater → Lake	6.36%
Loam	Environmental → Terrestrial → Soil → Loam	6.36%
Ice	Environmental → Aquatic → Freshwater → Ice	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.64%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	3.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.82%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.82%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.91%
Sediment	Environmental → Aquatic → Marine → Sediment	0.91%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.36%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.55%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	3.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.64%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	3.64%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.91%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.91%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	10.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.45%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.55%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	3.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.64%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.64%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	3.64%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	2.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.73%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.82%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.82%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.82%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.91%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.91%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.91%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.91%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.91%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.91%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.91%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004072	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleA_D2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300007799	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014266	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020057	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2	Environmental	Open in IMG/M
3300020167	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L239-20m	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300021517 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Balambano_FR2_MetaG	Environmental	Open in IMG/M
3300022213	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027850	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01 (SPAdes)	Environmental	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027878	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05 (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032456	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (spades assembly)	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M
3300034126	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_16	Environmental	Open in IMG/M
3300034156	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_18	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034281	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
MBSR1b_0798.00005220	2162886012	Miscanthus Rhizosphere	MVMVLPFLLGFVAALLAVGGRRNAAVGLSLITVVVQVWWLVYHATDKLAVSL
F24TB_132198512	3300000550	Soil	MVMVLPFLLGFVAALLAVAGRRNAALGLSLVTVVVQVWWLVYHATDKLAVSL*
F14TB_1011847232	3300001431	Soil	MVMVLPFLLGFVAALLAVAGRRNAALGLSLVTVVVQVWWLVYHATDKLA
Ga0055438_100058323	3300003995	Natural And Restored Wetlands	MVMVLPFAMGLLAALLACYGRARGALILGLATVVVQVWWLVYHATSALQISL*
Ga0055512_100716991	3300004072	Natural And Restored Wetlands	VVMVLPFILGLLAAACALARKRNAAVALLLVTIVVQVWWLLYHATDKLAVSL
Ga0062594_1003878242	3300005093	Soil	MVMVLPFLLGFVAAVLAYLGARRAALGLGLATAAVQVWWLFYHATDKLAISL*
Ga0070676_100984533	3300005328	Miscanthus Rhizosphere	MVMVLPFLLGFVAALLAVGGRRNAAVGLSLITVVVQVWWLVYHATDKLAVSL*
Ga0070690_1015299362	3300005330	Switchgrass Rhizosphere	MVMVLPFLLGFAAALLAVGGRRNAAVGLSLITVVVQVWWLVYHATDKLAVSL*
Ga0070670_1021854912	3300005331	Switchgrass Rhizosphere	MVMVLPFALGLIVALLAVAGRRNTALGLGLATVLIQVWWLVYHATDKLAVSL*
Ga0070668_1004153282	3300005347	Switchgrass Rhizosphere	MIMVLPFALGLLVALLAVAGRRNTALGLGLVTVLIQVWWLVYHATDKLAVSL*
Ga0070675_1008246702	3300005354	Miscanthus Rhizosphere	MVMVLPFLLSFVAALLAVGGRRNAAVGLSLITVVVQVWWLVYHATDKLAVSL*
Ga0070667_1003045221	3300005367	Switchgrass Rhizosphere	MVMVLPFLLGFVAAVLAYLGARRAALGTGLATVAVQVWWLFYHATDKLAISL*
Ga0070667_1003889342	3300005367	Switchgrass Rhizosphere	MVMVLPFVLAFAAALLGVAGRRKAAIGVALVTVAIQVWWLFYHATDTLAISL*
Ga0070667_1021645811	3300005367	Switchgrass Rhizosphere	GFVAAVLAYVGARRAALGAGLATVAIQVWWLFYHATGKLAISL*
Ga0070705_1015880882	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LLGFAAALLAVGGRRNAAVGLSLITVVVQVWWLVYHATDKLAVSL*
Ga0068867_1001669631	3300005459	Miscanthus Rhizosphere	MVMVLPFVLGFVAAVLAYVGARRAALGAGLATVAIQVWWLFYHATGKLAISL*
Ga0070698_1006324392	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MVMVLPFLLGFVAAWLAVGGRRNAALGLSLITVVVQVWWLVYHATDKLAVSL*
Ga0070699_1011463732	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MIMVLPFALGLIAALLAVAGRRNTALGLGLVTVLIQVWWLVYHATDKLAISL*
Ga0068853_1009291692	3300005539	Corn Rhizosphere	MVMVLPFLLGFVAAVLAYAGARRAALGAGLATIAVQVWWLFYHATDKLAISL*
Ga0070704_1004746081	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	FVAALLAVGGRRNAAVGLSLITVVVQVWWLVYHATDKLAVSL*
Ga0068861_1023967452	3300005719	Switchgrass Rhizosphere	MVMVLPFLLGFVAAVLAYLGARRAALGLGLATVAVQVWWLFYHATDKLAISL*
Ga0068863_1000554152	3300005841	Switchgrass Rhizosphere	MIMVLPFALAFVAALLAVTGRRNAAIGVALATVAIQVWWLFYHATDTLAISL*
Ga0081455_109867962	3300005937	Tabebuia Heterophylla Rhizosphere	MVMVLPFILGLVAAILAYAGARRPALAIGLATVAIQVWWLFYHATDTLAISL*
Ga0075521_100941822	3300006642	Arctic Peat Soil	MVMVLPFVMGLVATLLALGGRRQGALGVGLATVLVQVWWLVYHATDKLAVSL*
Ga0079222_109445731	3300006755	Agricultural Soil	MALPFVLGLVAAVLAYAGACRAALGTGLATVAIQVWWLFYHATDKLAISL*
Ga0068865_1012687871	3300006881	Miscanthus Rhizosphere	AAVLAYLGARRAALGLGLATAAVQVWWLFYHATDKLAISL*
Ga0079219_108590272	3300006954	Agricultural Soil	MVMVLPFLLAFVAALLALGRRRNAAIAVAIATVVIQVWWLFYHATSTLQISL*
Ga0105044_101111694	3300007521	Freshwater	MVLPFVMGLLAALLAMAGFRTGAMRVGLATVLIQVWWLVYHATDKLAVTL*
Ga0105049_107342962	3300007799	Freshwater	MVMVLPFVLALLAALLAMSGFRTGAMRVGLVTVLVQVWWLIYHATDKLAVTL*
Ga0105245_125479922	3300009098	Miscanthus Rhizosphere	AALLAVGGRRNAAVGLSLITVVVQVWWLVYHATDKLAVSL*
Ga0115027_104101911	3300009131	Wetland	TFTVVMVLPFVLALVAALLAMRGRRNAALGVGIVTVVVQVWWLVHHATDKLAIAL*
Ga0114942_14806081	3300009527	Groundwater	MVMVLPFVMGLLAALLAMSGHRTGALRMGVATVLVQVWWLLYHATDRLAVTL*
Ga0105237_105913993	3300009545	Corn Rhizosphere	LAVGGRRNAAVGLSLITVVVQVWWLVYHATDKLAVSL*
Ga0131092_100927155	3300009870	Activated Sludge	MVMVLPFVLALAAAVCALTRRRNAAIVLAIATVVIQVWWLFYHATDTLAISL*
Ga0131092_101242613	3300009870	Activated Sludge	MVMVLPFVLGLLAAVLAYAGARRAAIGTGLVTVGVQVWWLFYHATDKLAISL*
Ga0131092_101618912	3300009870	Activated Sludge	MALPFVLGLLAAVFAYFGRRNSALVAGAVTVAIQVWWLVYHATDKLSIGL*
Ga0131092_101639244	3300009870	Activated Sludge	MVMVLPFVLGFVAAVLAYAGARKAALAIGLATVAVQVWWLFYHATDKLAISL*
Ga0134122_109927722	3300010400	Terrestrial Soil	MVMVLPFALGLIVALLAVAGRRNAALGLGLVTVLIQVWWLVYHATD
Ga0137451_11279122	3300011438	Soil	MIMALPFVLGLVTALLAVGGRRNAALGLGVVTVVIQVWWLVYHATDTLAVSL*
Ga0157292_101336601	3300012900	Soil	MGFLAALLAFVGRRHAAIGLGLATVVVQVWWLFYHATDRLAISL*
Ga0157375_103312893	3300013308	Miscanthus Rhizosphere	MVLPFLLGFVAAVLAYLGARRAALGTGLATVAVQVWWLFYHATDKLAISL*
Ga0075359_11568952	3300014266	Natural And Restored Wetlands	MRRACGVVGELTVVMVLPFVLGLVAALFAMAGRRNAALGIGLVTVVVQVWWLVHHATDKLAITL*
Ga0157380_110031172	3300014326	Switchgrass Rhizosphere	MVMVLPFVLGFVAAVLAYVGARRAALGAALATVAIQVWWLFYHATGKLAISL*
Ga0163144_104143394	3300015360	Freshwater Microbial Mat	RTRIVVMVLPFVMGLLAALLAMSGFRTGAMRVGLATVLIQVWWLVYHATDKLAVTL*
Ga0132258_108880903	3300015371	Arabidopsis Rhizosphere	MVMALPFVLGLAAAVLAYAGARKAALAFGLATVAVQVWWLFYHATDKLAISL*
Ga0132257_1028520302	3300015373	Arabidopsis Rhizosphere	MIMVLPFLLGFVAAWLAFARQRNAALGVGLLTVVVQVWWLFYHATDKLAISL*
Ga0132255_1054270452	3300015374	Arabidopsis Rhizosphere	MALPFVLGLAAAVLAYAGARKAALAFGLATVAVQVWWLFYHATDKLAISL*
Ga0163161_105118982	3300017792	Switchgrass Rhizosphere	MVMVLPFVLGFVAAVLAYVGARRAALGAGLATVAIQVWCLFYHATGKLAISF
Ga0187777_103635312	3300017974	Tropical Peatland	MVMVLPFLLGFLAALLAVLGRRNAALGVGLLTVAVQGWWLFYHATDKLAISL
Ga0184638_10311572	3300018052	Groundwater Sediment	MVMVLPFLLGLVAALLAVGGRRNAALGLGLITVLVQVWWLVYHATDKLAVSL
Ga0184632_102709572	3300018075	Groundwater Sediment	MVMVLPFLLGLVAALLAVGGRRNAALGLGLITVVIQAWWLMYHATDKLAVSL
Ga0184625_102049772	3300018081	Groundwater Sediment	MVMVLPFLLGLVAALLAVGGRRNAALGLGLITVLVQVWWLIYHATDKLAVSL
Ga0190270_119564572	3300018469	Soil	MVMVLPFVLGLVAAVLAYAGARKTALGTGLLTVAVQVWWLFYHATDKLAISL
Ga0190274_100160395	3300018476	Soil	MVMVLPFLLGLVAALLAIGGRRNAALGLALITVVVQVWWLMYHATDKLAVSL
Ga0190274_110285592	3300018476	Soil	MVMVLPFVLGFVAALLAYAGARRAALATGLSTVAVQVWWLFYHATDKLAISL
Ga0190274_119766882	3300018476	Soil	AAVLAYIGARKAALATGLATVAVQVWWLFYHATDKLAISL
Ga0190274_131551011	3300018476	Soil	MVMVLPFAMGFLAALLAFMGRRYAAIGLGLATVVIQVWWLFYHATDSLAI
Ga0163151_101364733	3300020057	Freshwater Microbial Mat	MVLPFVMGLLAALLAMSGFRTGAMRVGLATVLIQVWWLVYHATDKLAVTL
Ga0194035_10232492	3300020167	Anoxic Zone Freshwater	MVMVLPFVMGLLAGLLAYLGWRRAAVGLCLATVVVQVWWLFYHATGKLGLSL
Ga0163153_100074863	3300020186	Freshwater Microbial Mat	MVLPFVMGWLAALLAMSGFRTGAMRVGLATVLIQVWWLVYHATDKLAVTL
(restricted) Ga0224723_10610882	3300021517	Freshwater Sediment	MVMVLPFVLALVAAVLALLGARKPALGVGLATVVLQVWWLFYHATDTLAIAL
Ga0224500_103288232	3300022213	Sediment	MVMVLPFVLGLLAAVLALARQRNAAVATALVAVLVQVWWLLYHATDRLPISL
Ga0222622_106992331	3300022756	Groundwater Sediment	MVMVLPFLLGLIAAFLAVGGRRNTALGLGLVTVLVQVWWLIYHATDKLAVSL
Ga0207656_100823242	3300025321	Corn Rhizosphere	MVMVLPFLLGFVAAVLAYLGARRAALGLGLATAAVQVWWLFYHATDKLAISL
Ga0209584_101078402	3300025878	Arctic Peat Soil	MVMVLPFVMGLVATLLALGGRRQGALGVGLATVLVQVWWLVYHGTDKLAVSL
Ga0207688_105180332	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MVMVLPFLLGFVAAVLAYLGARRAALGTGLATVAVQVWWLFYHATDKLAISL
Ga0207645_105998702	3300025907	Miscanthus Rhizosphere	MVMVLPFLLGFVAAVLAYLGARRAALGLGLATVAVQVWWLFYHATDKLAISL
Ga0207671_111517621	3300025914	Corn Rhizosphere	LAVGGRRNAAVGLSLITVVVQVWWLVYHATDKLAVSL
Ga0207650_107682732	3300025925	Switchgrass Rhizosphere	MVMVLPFVLGFLAAILAYSGARRAALGTGLATVAVQVWWLFYHATDKLAISL
Ga0207650_118436701	3300025925	Switchgrass Rhizosphere	MVMVLPFAMGFLAALLAFAGQRHAAIGLGLATVVVQVWWLFYHATDRLAISL
Ga0207659_102763613	3300025926	Miscanthus Rhizosphere	MVLPFLLGFVAAVLAYLGARRAALGLGLATAAVQVWWLFYHATDKLAISL
Ga0207659_103026781	3300025926	Miscanthus Rhizosphere	MVMVLPFLLSFVAALLAVGGRRNAAVGLSLITVVVQVWWLVYHATDKLAVSL
Ga0207704_109597432	3300025938	Miscanthus Rhizosphere	PFVLAFLAALLAFARQRNAALGLALLTVVVQVWWLFYHATDKLAISL
Ga0207689_1000042117	3300025942	Miscanthus Rhizosphere	MVMVLPFLLGFAAALLAVGGRRNAAVGLSLITVVVQVWWLVYHATDKLAVSL
Ga0207679_104901473	3300025945	Corn Rhizosphere	LLGFVAAVLAYLGARRAALGTGLATVAVQVWWLFYHATDKLAISL
Ga0207658_100166915	3300025986	Switchgrass Rhizosphere	MVMVLPFLLGFVAALLAVGGRRNAAVGLSLITVVVQVWWLVYHATDKLAVS
Ga0207658_101049544	3300025986	Switchgrass Rhizosphere	LLSFVAALLAVGGRRNAAVGLSLITVVVQVWWLVYHATDKLAVSL
Ga0207658_113323562	3300025986	Switchgrass Rhizosphere	MVMVLPFVLAFAAALLGVAGRRKAAIGVALVTVAIQVWWLFYHATDTLAISL
Ga0207658_119857392	3300025986	Switchgrass Rhizosphere	LGFVAAVLAYVGARRAALGAGLATVAIQVWWLFYHATGKLAISL
Ga0207677_105843141	3300026023	Miscanthus Rhizosphere	FLLGFVAALLAVGGRRNAAVGLSLITVVVQVWWLVYHATDKLAVSL
Ga0207683_113174571	3300026121	Miscanthus Rhizosphere	LAYVGARRAALGAGLATVAIQVWWLFYHATGKLAISL
Ga0207698_118852202	3300026142	Corn Rhizosphere	MVLPFLLGFVAAVLAYLGARRAALGLGLATVAVQVWWLFYHATDKLAISL
Ga0209177_104339452	3300027775	Agricultural Soil	MVMVLPFLLAFVAALLALGRRRNAAIAVAIATVVIQVWWLFYHATSTLQISL
Ga0209591_101802924	3300027850	Freshwater	IARTRFMVMVLPFVLGLLAALLAMSGFRTGAMRVGLVTVLVQVWWLIYHATDKLAVTL
Ga0209023_100226504	3300027870	Freshwater And Sediment	MVLPFILGFLAAACALARKRNAAVALLLVTIVVQVWWLLYHATDKLAVSL
Ga0209397_102480911	3300027871	Wetland	FLLALVAALLAMRGRRDAALGVGIVTVVVQVWWLVHHATDKLAIAL
Ga0209181_101233902	3300027878	Freshwater	MVMVLPFVLGLLAALLAMSGFRTGAMRVGLVTVLVQVWWLIYHATDKLAVTL
Ga0209253_101501843	3300027900	Freshwater Lake Sediment	VVMVLPFVLGLVAALFALAGRRNAALGVGAVTVVVQVWWLYYHATDKLAITL
Ga0268266_100251665	3300028379	Switchgrass Rhizosphere	MVMVLPFVLGFVAAVLAYVGARRAALGAGLATVAIQVWWLFYHATGKLAISL
Ga0268264_103417153	3300028381	Switchgrass Rhizosphere	MIMVLPFALAFVAALLAVTGRRNAAIGVALATVAIQVWWLFYHATDTLAISL
Ga0247828_100918154	3300028587	Soil	LPFVLGFVAAVLAYVGARRAALGAGLATVAIQVWWLFYHATDKLAISL
Ga0247828_105114952	3300028587	Soil	MVMVLPFVLGFVAAVLAYVGARRAALGAGLATVAIQVWWLFYHATGK
Ga0302254_101747542	3300028870	Fen	MVMVLPFVLGLVGALLAVAGRRNAALGIGVATVIVQVWWLFYHATDKLAISL
Ga0311334_113296152	3300029987	Fen	MVLPFILALLAGLCAFARQRNAAIALSLATVVVQVWWLLYHATDRLAVSL
Ga0311349_109604142	3300030294	Fen	GMVMVLPFVLGLVGALLAVAGRRNAALGIGVATVIVQVWWLFYHATDKLAISL
Ga0311364_107605261	3300031521	Fen	MVMVLPFVLGLVGALLAVAGRRNAALGIGVATVIVQVWWLFYHATDKLA
Ga0308175_1001099082	3300031938	Soil	MVMVLPFVLGFVAAVLAYFGARRAALGTGLATVVVQVWWLFYHATDKLAISL
Ga0308175_1029028531	3300031938	Soil	MVMVAPFVLGFIAAALAFAGQRKAALGMGLVTVVVQVGWLFYHATDKLAIVL
Ga0308174_113878182	3300031939	Soil	MVMVLPFLLALAAALLAVTRRRNAAIGVALLTVVIQVWWLFHHATDSLAISL
Ga0315283_106952901	3300032164	Sediment	MVMALPFLLGLLAAVFAYFGRRNSALVVGAITVAFQVWWLVYHATDRL
Ga0315271_104353632	3300032256	Sediment	MVMVLPFVMGLLAALLALSGYRTGAMRLGLAAVVVQVWWLVYHATDKLAVTL
Ga0335394_100295994	3300032456	Freshwater	MVLPFVMGLLAALLAMAGFRTGAMRVGLATVLIQVWWLVYHATDKLAVTL
Ga0335083_1000372811	3300032954	Soil	MIMALPFLLGFLAALLAVLGRRNAAVGVGLLTVAVQVWWLFYHATDKLAISL
Ga0316605_109891552	3300033408	Soil	MVLPFVLALVAALLAMRRRRNAALGVGIVTVVVQVWWLVHHATDKLAIVL
Ga0316625_1013301041	3300033418	Soil	MVLPFVLALVAALLAMRGRRNAALGVGIVTVVVQVWWLVHHATDKLAIAL
Ga0314866_079436_112_270	3300033807	Peatland	MIMALPFLLGFLAALLAVLGRRNAALGVGLLTVAVQGWWLFYHATDKLAISL
Ga0370486_013573_1297_1464	3300034126	Untreated Peat Soil	MPAVVMVLPFVMGLLAALLALSGYRTGAMRVGIATVVVQVWWLVYHATDQLAVTL
Ga0370502_0060683_31_198	3300034156	Untreated Peat Soil	MPAVVMVLPFVMGLLAALLALSGYRTGAMRVGLATVVVQVWWLVYHATDQLAVTL
Ga0370501_0255277_389_547	3300034195	Untreated Peat Soil	MVMVLPFLMGLVATLLALGGRRQGALGVGLATVLVQVWWLVYHATDKLAVSL
Ga0370481_0121266_295_447	3300034281	Untreated Peat Soil	MVLPFILALLAGLCAFARQRNAAIALSLATVVVQVWWLLYHATDKLAVSL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters