Metagenome / Metatranscriptome Family F087910

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087910
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	48 residues
Representative Sequence	EAVEDEAPALTPEEEAGIEAALESYRQGRVVDAKRAREIIDAALGR
Number of Associated Samples	100
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.27 %
% of genes near scaffold ends (potentially truncated)	79.09 %
% of genes from short scaffolds (< 2000 bps)	94.55 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.909 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (15.454 % of family members)
Environment Ontology (ENVO)	Unclassified (26.364 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (33.636 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.49% β-sheet: 0.00% Coil/Unstructured: 63.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF05016	ParE_toxin	38.18
PF13443	HTH_26	2.73
PF12840	HTH_20	1.82
PF12704	MacB_PCD	1.82
PF03450	CO_deh_flav_C	1.82
PF13365	Trypsin_2	0.91
PF01863	YgjP-like	0.91
PF06863	DUF1254	0.91
PF05569	Peptidase_M56	0.91
PF02738	MoCoBD_1	0.91
PF13751	DDE_Tnp_1_6	0.91
PF07819	PGAP1	0.91
PF06964	Alpha-L-AF_C	0.91
PF00158	Sigma54_activat	0.91
PF03965	Penicillinase_R	0.91
PF00144	Beta-lactamase	0.91
PF02780	Transketolase_C	0.91
PF08818	DUF1801	0.91
PF00027	cNMP_binding	0.91
PF14022	DUF4238	0.91
PF01436	NHL	0.91
PF01925	TauE	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.91
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.91
COG1075	Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold	Lipid transport and metabolism [I]	0.91
COG1451	UTP pyrophosphatase, metal-dependent hydrolase family	General function prediction only [R]	0.91
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.91
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.91
COG2267	Lysophospholipase, alpha-beta hydrolase superfamily	Lipid transport and metabolism [I]	0.91
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.91
COG3534	Alpha-L-arabinofuranosidase	Carbohydrate transport and metabolism [G]	0.91
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.91
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.91
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.91
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.82 %
Unclassified	root	N/A	8.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.91 %
Unclassified	root	N/A	8.18 %
Viruses	superkingdom	All Organisms → Viruses	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.91 %
Unclassified	root	N/A	8.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	51.82 %
Unclassified	root	N/A	8.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	42.73 %
Unclassified	root	N/A	8.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.64 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.91 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.91 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.82 %
Unclassified	root	N/A	8.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.64 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.91 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	0.91 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.91 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.82 %
Unclassified	root	N/A	8.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.64 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.91 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.91 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.91 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.82 %
Unclassified	root	N/A	8.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.64 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.91 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.91 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.91 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.82 %
Unclassified	root	N/A	8.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.64 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.91 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.91 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.91 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	41.82 %
Unclassified	root	N/A	8.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.64 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.91 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.91 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.91 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000881\|JGI10215J12807_1003340	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300000891\|JGI10214J12806_11952072	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300000956\|JGI10216J12902_121011926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300001431\|F14TB_106510328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	791	Open in IMG/M
3300003203\|JGI25406J46586_10133596	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300004463\|Ga0063356_100309903	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300004463\|Ga0063356_104345093	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300004779\|Ga0062380_10026077	All Organisms → cellular organisms → Bacteria → Proteobacteria	1803	Open in IMG/M
3300005172\|Ga0066683_10144561	Not Available	1458	Open in IMG/M
3300005174\|Ga0066680_10556956	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300005175\|Ga0066673_10210646	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300005290\|Ga0065712_10534373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300005332\|Ga0066388_105085234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300005447\|Ga0066689_10089298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1746	Open in IMG/M
3300005518\|Ga0070699_100537708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300005540\|Ga0066697_10528365	All Organisms → cellular organisms → Bacteria → Proteobacteria	665	Open in IMG/M
3300005545\|Ga0070695_101169041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300005549\|Ga0070704_102224447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300005553\|Ga0066695_10621150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300005556\|Ga0066707_10463552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300005566\|Ga0066693_10194567	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300005568\|Ga0066703_10232863	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300005834\|Ga0068851_10282099	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300005842\|Ga0068858_100384483	All Organisms → cellular organisms → Bacteria → Acidobacteria	1347	Open in IMG/M
3300005843\|Ga0068860_100743962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	992	Open in IMG/M
3300005937\|Ga0081455_10046032	All Organisms → cellular organisms → Bacteria	3790	Open in IMG/M
3300006638\|Ga0075522_10124680	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300006797\|Ga0066659_10703346	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300006797\|Ga0066659_11679761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300006894\|Ga0079215_10937729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300006903\|Ga0075426_10964457	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300006954\|Ga0079219_12180504	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300009012\|Ga0066710_100196874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2864	Open in IMG/M
3300009012\|Ga0066710_101108632	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300009032\|Ga0105048_11053805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300009137\|Ga0066709_101916872	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	824	Open in IMG/M
3300009147\|Ga0114129_10794940	All Organisms → cellular organisms → Bacteria → Acidobacteria	1207	Open in IMG/M
3300009171\|Ga0105101_10280265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	806	Open in IMG/M
3300009540\|Ga0073899_10837232	Not Available	654	Open in IMG/M
3300010301\|Ga0134070_10158376	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300010359\|Ga0126376_10573586	All Organisms → Viruses → Predicted Viral	1061	Open in IMG/M
3300011120\|Ga0150983_12667169	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300011269\|Ga0137392_11197618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300011422\|Ga0137425_1075424	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300011443\|Ga0137457_1044552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1278	Open in IMG/M
3300012096\|Ga0137389_11419744	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300012146\|Ga0137322_1038226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300012208\|Ga0137376_11437809	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300012212\|Ga0150985_101589650	Not Available	798	Open in IMG/M
3300012228\|Ga0137459_1203993	Not Available	577	Open in IMG/M
3300012680\|Ga0136612_10391028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300012922\|Ga0137394_11215859	Not Available	617	Open in IMG/M
3300012976\|Ga0134076_10386199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300013500\|Ga0120195_1031549	Not Available	535	Open in IMG/M
3300014157\|Ga0134078_10238931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300014745\|Ga0157377_10827528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300015052\|Ga0137411_1075892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300015200\|Ga0173480_10236093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300015245\|Ga0137409_10201827	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300015360\|Ga0163144_11460448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300015360\|Ga0163144_11590425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300015372\|Ga0132256_103877354	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300015373\|Ga0132257_101983199	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300017657\|Ga0134074_1291581	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300018000\|Ga0184604_10202034	Not Available	681	Open in IMG/M
3300018028\|Ga0184608_10225860	Not Available	822	Open in IMG/M
3300018031\|Ga0184634_10215546	All Organisms → cellular organisms → Bacteria → Proteobacteria	876	Open in IMG/M
3300018056\|Ga0184623_10154152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1062	Open in IMG/M
3300018079\|Ga0184627_10453412	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300018422\|Ga0190265_12629412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300018466\|Ga0190268_11611191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300018468\|Ga0066662_10054434	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300018476\|Ga0190274_10384908	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300018481\|Ga0190271_13730050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300019458\|Ga0187892_10000064	All Organisms → cellular organisms → Bacteria	232721	Open in IMG/M
3300019487\|Ga0187893_10305360	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300020015\|Ga0193734_1070026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300021081\|Ga0210379_10520682	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300022549\|Ga0212091_10427001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300025149\|Ga0209827_10318113	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300025318\|Ga0209519_10168094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10	1296	Open in IMG/M
3300025917\|Ga0207660_11115632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300025926\|Ga0207659_11421300	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300026035\|Ga0207703_11955314	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300026089\|Ga0207648_11641017	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300026089\|Ga0207648_11817300	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300026318\|Ga0209471_1048805	All Organisms → cellular organisms → Bacteria	1975	Open in IMG/M
3300026318\|Ga0209471_1130252	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300026538\|Ga0209056_10139848	All Organisms → cellular organisms → Bacteria	1879	Open in IMG/M
3300026538\|Ga0209056_10688712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300027324\|Ga0209845_1025302	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300027831\|Ga0209797_10033383	All Organisms → cellular organisms → Bacteria → Proteobacteria	2328	Open in IMG/M
3300027875\|Ga0209283_10244689	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300027878\|Ga0209181_10801919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300027882\|Ga0209590_10676265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300028380\|Ga0268265_11978763	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300028381\|Ga0268264_10776706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300028381\|Ga0268264_12026926	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300030570\|Ga0247647_1117175	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300031229\|Ga0299913_11268298	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300031538\|Ga0310888_10654703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300031740\|Ga0307468_100505676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300031944\|Ga0310884_10342139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300031944\|Ga0310884_10818902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300031949\|Ga0214473_10657278	All Organisms → cellular organisms → Bacteria → Acidobacteria	1149	Open in IMG/M
3300032157\|Ga0315912_11168025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300032163\|Ga0315281_10016688	All Organisms → cellular organisms → Bacteria	9782	Open in IMG/M
3300032163\|Ga0315281_12166319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300033407\|Ga0214472_10305412	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300034177\|Ga0364932_0236079	Not Available	692	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.00%
Host-Associated	Host-Associated	19.09%
Engineered	Engineered	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.00%
Aquatic	Environmental → Aquatic	20.00%
Plants	Host-Associated → Plants	19.09%
Wastewater	Engineered → Wastewater	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.55%
Freshwater	Environmental → Aquatic → Freshwater	10.91%
Sediment	Environmental → Aquatic → Sediment	8.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.55%
Cave	Environmental → Terrestrial → Cave	1.82%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.91%
Floodplain	Environmental → Terrestrial → Floodplain	0.91%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.09%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.18%
Loam	Environmental → Terrestrial → Soil → Loam	7.27%
Lake	Environmental → Aquatic → Freshwater → Lake	3.64%
Ice	Environmental → Aquatic → Freshwater → Ice	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.73%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.82%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.91%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.91%
Sand	Environmental → Terrestrial → Soil → Sand	0.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.91%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.64%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.73%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.82%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	1.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.82%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.91%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.91%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.55%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	1.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.82%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.82%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.82%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.82%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.91%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.91%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.91%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.91%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.91%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.91%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.91%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.91%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.91%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.91%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009032	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009540	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-Ph	Engineered	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011422	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT640_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012146	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT400_2	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013500	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T4.rep2	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300022549	Cold Creek_combined assembly	Environmental	Open in IMG/M
3300025149	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 (SPAdes)	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027878	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300030570	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10215J12807_10033402	3300000881	Soil	AVEDEAPALSPEEEAGIEAALESYRQGRVIDARRAREIIDAALGR*
JGI10214J12806_119520721	3300000891	Soil	ELPAGRYVVEAVEDEAPALSPEEEAGIEAALESYRQGRVIDARRAREIIDAALGR*
JGI10216J12902_1210119261	3300000956	Soil	GRYVVEAVEDEAAALTPEEDAGIEAALESYRQGRVVDAKRAREIIDAALGR*
F14TB_1065103281	3300001431	Soil	EEAPVLTPEEEAAGIEAALESYRQGRVVHAKRARQIIHAALRR*
JGI25406J46586_101335961	3300003203	Tabebuia Heterophylla Rhizosphere	GRYVVEAVEDEAPALTPEEEAGIEAALESYRQGRVVDSKRAREIIDAALGR*
Ga0063356_1003099031	3300004463	Arabidopsis Thaliana Rhizosphere	PALSLDEEAGIEAALESYRQGHVVDAKRAREIIDAALGR*
Ga0063356_1043450932	3300004463	Arabidopsis Thaliana Rhizosphere	DPAGRYVIEAVEDEAPALTPEEEAGIVAALESYRQGRVIDSKRAREIIDAALGR*
Ga0062380_100260771	3300004779	Wetland Sediment	MRELPAGRYVVESVDLEAPPLSSEEEAGIEVALESYRQGRTVDAKRAREIINATLGR*
Ga0066683_101445613	3300005172	Soil	EAVDEEAPALSPDEEAGIEAALESYRQGRVVDAKRARQIIDAALGR*
Ga0066680_105569561	3300005174	Soil	VIQAVEDEAPALSAEEEAGIEGALELYRQGRVVAAKHAGKIIDAALDR*
Ga0066673_102106461	3300005175	Soil	APALTPEEEAGIEAALESYRQGRVVDSKRAREIIDAALGR*
Ga0065712_105343731	3300005290	Miscanthus Rhizosphere	EAVEDEAPALTPEEEAGIEAALESYRQGRVVDAKRAREIIDAALGR*
Ga0066388_1050852343	3300005332	Tropical Forest Soil	PAGRYVVEAVEDEAPALTPEEEAGIEAALESYRQGRVVDSKRAREIIDAALGR*
Ga0066689_100892984	3300005447	Soil	EEEAPVLSPEEEAGIEAALESYRQGRVVNAKRAREIIDAALGR*
Ga0070699_1005377081	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VEAVEEEAPVLTQDEEAGIEAALESYRQGRVVDAKRARQIIDVALGR*
Ga0066697_105283651	3300005540	Soil	ALSPDEEAGIEAALESYRQGRIVDAKRARQIIDAALGR*
Ga0070695_1011690412	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	GRYVVEAVEEEAPVLTQDEEAGIEAALESYRQGRVVDAKRARQIIDVALGR*
Ga0070704_1022244472	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	DEAPALSPDEDAGIEAALESYRQGRTVDAKHARQIIDAALGR*
Ga0066695_106211501	3300005553	Soil	ELRDLPAGRYVVEAIEEEAPVLSPEEEAGIEAALESYRQGRVVNAKRAREIIDAALGR*
Ga0066707_104635521	3300005556	Soil	EAPVLSPEEEAGIEAALESYRQGRVVNAKRAREIIDAALGR*
Ga0066693_101945672	3300005566	Soil	VIEDEAPPLSPEEEAGIEAALESYRQGRIVDAKRAREIIDAALWR*
Ga0066703_102328633	3300005568	Soil	VEAVEEEAPVLLPDEEAGIEAALESYRQGRVVDAKRAREIIDAALGR*
Ga0068851_102820992	3300005834	Corn Rhizosphere	LEESRLSTYSLTAGRYVIEAVDEEAPALSADEEAGIEAALESYHQGRVVDVKRARQIIDAALGR*
Ga0068858_1003844831	3300005842	Switchgrass Rhizosphere	EEEAGIEAALESYRQGRVIDSKRAREIIDAALGR*
Ga0068860_1007439621	3300005843	Switchgrass Rhizosphere	RELPAGRYVVEAVDEEAPALSPEEETGIEAALESYRQGRVVDAKRAREIIDAALGR*
Ga0081455_100460324	3300005937	Tabebuia Heterophylla Rhizosphere	LTPEEEAGIEAALESYRQGRVVDSKRTREIIDAALGR*
Ga0075522_101246805	3300006638	Arctic Peat Soil	LSPDEEAGIDAALESYRQGRVVDAKRAREIIDTALGR*
Ga0066659_107033463	3300006797	Soil	LVEQVDEQAPTVTLNEDAGIEEALESYGQGRVVDAKRARAIIDAVLGR*
Ga0066659_116797612	3300006797	Soil	PAELRELPAGRYVVEAIDDDAPALSSDEEAGIEAALESYRQGRIVDAKRARQIIDAALGR
Ga0079215_109377291	3300006894	Agricultural Soil	ELPAGRYVIEPVDEEAPALSPEEEAGSEAALESYRQGRVVDAQRAREIIDAALGR*
Ga0075426_109644571	3300006903	Populus Rhizosphere	SPEEEAGIEAAVESFRQGRVVDAKRAREIIDAAR*
Ga0079219_121805041	3300006954	Agricultural Soil	LSPDEEAGIEAVLESYLQGRVVDADRAREIIHAALGR*
Ga0066710_1001968741	3300009012	Grasslands Soil	EDEAPALTPEEEAGIEAALESYRQGRVVDSKRTREIIDAALGR
Ga0066710_1011086322	3300009012	Grasslands Soil	VLTPDEEAGIAAALESCRQGRVVDAKRTRAIIDAALGR
Ga0105048_110538051	3300009032	Freshwater	PPLTAEEDAGIEAALESYRQGRVVDATRARAIIDAALKR*
Ga0066709_1019168721	3300009137	Grasslands Soil	VPPEVRDLPAGRYIVEAVEDEAPALSPDEEGGIETALESYRQGCVVDAKHARQIIDAALGR*
Ga0114129_107949402	3300009147	Populus Rhizosphere	VFFWTSEIAAGIEAALASYRQGRVVDAKRAREIIDAALGR*
Ga0105101_102802653	3300009171	Freshwater Sediment	RELPAGRYVVEAVEDEAPALSPEEEAGIEAALESYRQGRVVDAKRARHIIDAALGR*
Ga0073899_108372323	3300009540	Activated Sludge	EQELTAEDEAGIEAALESYEQGRTMTQEQARALIDAALRP*
Ga0134070_101583761	3300010301	Grasslands Soil	PTLTPDEEAGIEAALESYRQGRVVDARRARQIIDAALGR*
Ga0126376_105735863	3300010359	Tropical Forest Soil	MEAVEDEAPALTLEEEAGIEAALESYRQGRVVDAKRAREIIDAALGR*
Ga0150983_126671692	3300011120	Forest Soil	LPAGRYVLEALDSEAPDLSADEEAGIDTTLESYRQGRVVDAKRAREIIDAALGR*
Ga0137392_111976182	3300011269	Vadose Zone Soil	ELPAGRYVVEAVDEEAPALSPDEEAGIEAALESYRQGRVVDAKRARQIIDAALGR*
Ga0137425_10754242	3300011422	Soil	RELPAGRYVIEAIDDAPALSAHEEAGLDAALESYRQGRVVDARRARQIIDAALGR*
Ga0137457_10445521	3300011443	Soil	DEAPALSPEDEAGIEAALESYRQGRVVDAKRAREIIDAALGR*
Ga0137389_114197442	3300012096	Vadose Zone Soil	LPAGRYVVEALEDEAPALSPEEDTGIETALESHRQGRIVDARRARTIIDAALER*
Ga0137322_10382261	3300012146	Soil	DLPAGRYVVEAVDEEAPALSPEEEAGIEVALESYRQGRVVDAKRAREIIDTALGR*
Ga0137376_114378091	3300012208	Vadose Zone Soil	DDEAPTLSPEEEAGIEVALESYRQGRVIDAKHAREIIDAALGR*
Ga0150985_1015896503	3300012212	Avena Fatua Rhizosphere	LPAGRYVVEAVDDDAPVLSPEEEAGIETALESYRQGRVVDAKRARQIIDAALGR*
Ga0137459_12039931	3300012228	Soil	AVQDEAPALSPEEESGIEAALESYRQGGAAEAKRAREIIDAALER*
Ga0136612_103910281	3300012680	Polar Desert Sand	VEAIEDDAPALSADEEAGIEAALESYRQGRVVDAKRTRQIIDAALGH*
Ga0137394_112158593	3300012922	Vadose Zone Soil	DEEAGIEAALESYRQGRVVDAKRAREIIDAALGR*
Ga0134076_103861993	3300012976	Grasslands Soil	SPDEEAGIEAALESYRQGRIVDAKRARQIIDAALGR*
Ga0120195_10315491	3300013500	Terrestrial	EEEAGIEAALESYRAGRAVDAKRAREIIDAALGR*
Ga0134078_102389313	3300014157	Grasslands Soil	LTPDEEAGIEAALESYRQGRVVDARRARQIIDAALGR*
Ga0157377_108275282	3300014745	Miscanthus Rhizosphere	EAVEDEAPALTPEEEAGIEAALESYRQGRVVDSKRAREIIDAALGR*
Ga0137411_10758922	3300015052	Vadose Zone Soil	DEEAGIEAALESYRQGRIVDAKRARQIIDAALGR*
Ga0173480_102360932	3300015200	Soil	DEEAGIEAALESYRKGRVVDSKRAREIIDAALGR*
Ga0137409_102018274	3300015245	Vadose Zone Soil	EAVEEEAPVLTQDEEAGIEAALESYRQGRVVDAKRARQIIDVALGR*
Ga0163144_114604483	3300015360	Freshwater Microbial Mat	AGRYVVEAVDDEAPALSPDEEAGIEAALESYRQGRVVDATRSRQIIDAAFGR*
Ga0163144_115904251	3300015360	Freshwater Microbial Mat	AGRYVVEAVDDEAPALSPDEEAGIEAALESYRQGRVVDATRARQIIDAAFGR*
Ga0132256_1038773541	3300015372	Arabidopsis Rhizosphere	PEGRYVVEAVEDEAPALTPEEEAGIEAALESYRQGQVVDSKRAREIIDAAPGR*
Ga0132257_1019831992	3300015373	Arabidopsis Rhizosphere	LLELPAGRYVVESVEEEPPVLTPEEEHGIEAALEPYRQGSIIDGKRAREIIDIASRR*
Ga0134074_12915811	3300017657	Grasslands Soil	LVEQIDEQAPTVTLNEDAGIEEALESYGQGRVVDAKHARAIIDAVLGR
Ga0184604_102020341	3300018000	Groundwater Sediment	FVVEVVEDEVPALSPEEEAGIEAAFESYRQGRVVDAKPAREIIDATLGR
Ga0184608_102258603	3300018028	Groundwater Sediment	EDEVPVLSPEEEAGIEAALESCREGRVVDAKPAREIIDATLGR
Ga0184634_102155462	3300018031	Groundwater Sediment	VLSPEEEAGIEAALESYRQGRVVDAKRAREIIDAALGR
Ga0184623_101541522	3300018056	Groundwater Sediment	LEEEAPTLSPEEEAGIETALESCRQGRVVDAKRVREIIDAALGR
Ga0184627_104534122	3300018079	Groundwater Sediment	AVEENAPILSPDEEAGVEAAFESYRQGRVVDAKRAREIIDAALRR
Ga0190265_126294121	3300018422	Soil	MAPALSPEEDAGTEAALESYRQGRVVDARRAREIIDAALER
Ga0190268_116111911	3300018466	Soil	EGTTLSPEEEAGIEAALESYRQGRIVDAKRAREIIDAALGR
Ga0066662_100544341	3300018468	Grasslands Soil	VESVDDEAPTLSPEEEAGIEVALESYRQGRVIDAKRAREIIDAALGR
Ga0190274_103849082	3300018476	Soil	VGRYVVEAVEDEAQALTPEEEAGIEAALESYRQGRVVDSKRAREIIDAALGR
Ga0190271_137300501	3300018481	Soil	VEAVDEEAPALSPEEEVGIEAALESYRMGRVVDAKRAREIIDAALGR
Ga0187892_1000006441	3300019458	Bio-Ooze	VPAELRELPAGRYLVEAVEDDAPRLTSDEEVGIDAALESYRQGRVVDAGRAREIINAALG
Ga0187893_103053601	3300019487	Microbial Mat On Rocks	AVEDEAPALSPEEEAGIEAALESYRQGRVVDSRRAREIIDAALGR
Ga0193734_10700263	3300020015	Soil	AELRELPAGRYVVEAVDEEAPALSPDEEAGIEAALESYRQGRVVDAKRAREIIDTALGR
Ga0210379_105206822	3300021081	Groundwater Sediment	VVEAIDDDAPSLSPDEEAGIEAALESYRQGRVVDAKRARQIIDAALGH
Ga0212091_104270012	3300022549	Groundwater	AIDDHAPSLSPDEEAGIEAALESYRQGRVVDAKRARQIIDAALGR
Ga0209827_103181131	3300025149	Thermal Springs	YVVEAVDDELRSLSSEEEAGIEVALESYRQGHVVDAKRAREIINAASGR
Ga0209519_101680943	3300025318	Soil	PAGRYVLEAVDDEAPALSPDEEAGIEAALESYRQGRVVDAKRARQIIDAALGR
Ga0207660_111156321	3300025917	Corn Rhizosphere	VVEAVEDEAPALSPEEEAGIEAALESYRHGRVVDAKRAREIIDAALGR
Ga0207659_114213001	3300025926	Miscanthus Rhizosphere	PEEEAGIEAALESYRQGRVIDSKRAREIIDAALGR
Ga0207703_119553142	3300026035	Switchgrass Rhizosphere	LEESRLSTYSLTAGRYVIEAVDEEAPALSADDEAGIEAALESYHQGRVVDVKRARQIIDAALGR
Ga0207648_116410172	3300026089	Miscanthus Rhizosphere	VGRYVVEAVDDEAPALTPEEEAVIEAALESYRQGRVVDSRRAREIIDAALDR
Ga0207648_118173001	3300026089	Miscanthus Rhizosphere	VEAVEDEAPALTFEEEAGIEAALESYRQGRVVDSKRAREIIDAALGR
Ga0209471_10488054	3300026318	Soil	VPPELRELPAGRYLVEAVEEEAPVLLPDEEARIEAALESYRQGRVVDAKRAREIIDAALG
Ga0209471_11302522	3300026318	Soil	LPAGRYVVEPVEDEAPALTPEEEAGIEAALESYRQGRIVDSKRAREIIDAALGR
Ga0209056_101398481	3300026538	Soil	VIAKHQEVYHLPAGRYLVEQVDEQAPTVTLNEDAGIEEALESYGQGRVVDAKRARAIIDAVLGR
Ga0209056_106887122	3300026538	Soil	SPEEEAGIEAALESYRQGRVVDAKRARQIIDAALGR
Ga0209845_10253022	3300027324	Groundwater Sand	RYVVEPVEEAPVLTPEEEAGTDEALESYRQGRVVYAKRARAIIDAALGR
Ga0209797_100333831	3300027831	Wetland Sediment	MRELPAGRYVVESVDLEAPPLSSEEEAGIEVALESYRQGRTVDAKRAREIINATLGR
Ga0209283_102446893	3300027875	Vadose Zone Soil	PELRELPAGRYVVEPLDEEAPSLSPDAEAGIEAALESYRQGRVVDAKRAREIIDAALRR
Ga0209181_108019191	3300027878	Freshwater	PPLTAEEDAGIEAALESYRQGRVVDATRARAIIDAALKR
Ga0209590_106762651	3300027882	Vadose Zone Soil	AELRELPAGRYVVEAVDDEAPGLSPDEEAGIEAALESYRQGRVVDSKRARQIIDTALGR
Ga0268265_119787631	3300028380	Switchgrass Rhizosphere	VEAVEDDAPALTPEEEAGIEAALESYRQGRVIDSKRAREIIDAALGR
Ga0268264_107767063	3300028381	Switchgrass Rhizosphere	LRELPAGRYVVEAVDEEAPALSPEEETGIEAALESYRQGRVVDAKRAREIIDAALGR
Ga0268264_120269263	3300028381	Switchgrass Rhizosphere	HELRELPAGRYVVEAVEEKAPSLTPEEEAGIETALESYRQGRVVDAKRAREIIDAALGR
Ga0247647_11171752	3300030570	Soil	VKEYADEAAALSPEEEAGIEAALESYRQGRVVDAKRAREIID
Ga0299913_112682981	3300031229	Soil	SAEEEAGLEAALESYRQGRVVDARRTREIIDAALGR
Ga0310888_106547032	3300031538	Soil	DDEAPALSPDEEAGIEAALESYRQGRVVDAKRAREIIDAALGR
Ga0307468_1005056763	3300031740	Hardwood Forest Soil	VALSPAEEAGLEAALESYRQGRVVDAKRAREIIDAALGR
Ga0310884_103421393	3300031944	Soil	LYVVEAVEDEAPALSPEEEAGIEAALESYRQGRVIDARRAREIIDAALGR
Ga0310884_108189022	3300031944	Soil	ALSPEEEAGIEAALESYRQGRVVDAKRAREIIDAALGR
Ga0214473_106572783	3300031949	Soil	DAPRLTSDEEAGIETALESYRQGRVVDADRAREIINAALGR
Ga0315912_111680251	3300032157	Soil	PAEQRELPAGRYLVEAVEDEAPRLSADEEAGIEAALESYRQGRIVDAARAREIISAALGR
Ga0315281_100166883	3300032163	Sediment	MVEAVDDEAPDLSVDKEAGVEAALESYRQGHVVDAKRARQIIDAALGG
Ga0315281_121663192	3300032163	Sediment	PAEMRELPAGRYVVESVDLEAPPLSLEEDAGIEAALESYRQGRIVDAKRAREIIDATLGR
Ga0214472_103054122	3300033407	Soil	VVEAVDDEVRSLLPEEGAGIEVALESYRQGHVVDAKRTREIIDAASGRENPPHWKRSP
Ga0364932_0236079_69_224	3300034177	Sediment	VVATIEAVDDEAAALSPDEEAGIEAALESYRQGRIVDGKLARKIIDAALGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087910

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences