Metagenome Family F087895

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087895
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	50 residues
Representative Sequence	MSKAIKTVKSKSQLQSLLSKISKGKSLLQQWIELDPIYVGEKTKADY
Number of Associated Samples	93
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.64 %
% of genes near scaffold ends (potentially truncated)	99.09 %
% of genes from short scaffolds (< 2000 bps)	92.73 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.364 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (36.364 % of family members)
Environment Ontology (ENVO)	Unclassified (82.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (86.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.67% β-sheet: 0.00% Coil/Unstructured: 77.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF05050	Methyltransf_21	17.27
PF00730	HhH-GPD	10.00
PF03332	PMM	6.36
PF03796	DnaB_C	5.45
PF07733	DNA_pol3_alpha	4.55
PF13186	SPASM	4.55
PF02348	CTP_transf_3	1.82
PF11953	DUF3470	0.91
PF13365	Trypsin_2	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	10.00
COG0177	Endonuclease III	Replication, recombination and repair [L]	10.00
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	10.00
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	10.00
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	10.00
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	6.36
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	5.45
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	5.45
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	4.55
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	4.55
COG1083	CMP-N-acetylneuraminic acid synthetase, NeuA/PseF family	Cell wall/membrane/envelope biogenesis [M]	1.82
COG1212	CMP-2-keto-3-deoxyoctulosonic acid synthetase	Cell wall/membrane/envelope biogenesis [M]	1.82
COG1861	Spore coat polysaccharide biosynthesis protein SpsF, cytidylyltransferase family	Cell wall/membrane/envelope biogenesis [M]	1.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.55 %
Unclassified	root	N/A	25.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.00 %
Unclassified	root	N/A	25.45 %
Viruses	superkingdom	All Organisms → Viruses	14.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.36 %
Unclassified	root	N/A	25.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.55 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	3.64 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.64 %
Unclassified	root	N/A	25.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.55 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	10.00 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	3.64 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.55 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	10.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.36 %
Candidatus Pacearchaeota	clade	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota	3.64 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.82 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.55 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	10.00 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.64 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.64 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.55 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	10.00 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.64 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.64 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.91 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.55 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	10.00 %
Candidatus Endolissoclinum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum	3.64 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.64 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	0.91 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.55 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	10.00 %
unclassified Candidatus Endolissoclinum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum	3.64 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.64 %
unclassified Saprospirales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales	0.91 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.55 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	10.00 %
Candidatus Endolissoclinum sp. TMED37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	3.64 %
Candidatus Pacearchaeota archaeon	species	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	3.64 %
Saprospirales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	0.91 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10212624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	612	Open in IMG/M
3300001349\|JGI20160J14292_10106140	All Organisms → cellular organisms → Bacteria → Proteobacteria	984	Open in IMG/M
3300001450\|JGI24006J15134_10075928	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300001589\|JGI24005J15628_10097440	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	996	Open in IMG/M
3300001947\|GOS2218_1002572	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300005433\|Ga0066830_10010536	All Organisms → cellular organisms → Bacteria → Proteobacteria	1757	Open in IMG/M
3300006870\|Ga0075479_10244052	Not Available	713	Open in IMG/M
3300007229\|Ga0075468_10218435	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300009000\|Ga0102960_1141121	Not Available	870	Open in IMG/M
3300009001\|Ga0102963_1334985	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300009077\|Ga0115552_1086129	All Organisms → Viruses → Predicted Viral	1375	Open in IMG/M
3300009077\|Ga0115552_1137557	All Organisms → Viruses → Predicted Viral	1033	Open in IMG/M
3300009124\|Ga0118687_10327879	All Organisms → cellular organisms → Bacteria → Proteobacteria	581	Open in IMG/M
3300009172\|Ga0114995_10093057	All Organisms → Viruses → Predicted Viral	1693	Open in IMG/M
3300009173\|Ga0114996_10150861	All Organisms → cellular organisms → Bacteria → Proteobacteria	1914	Open in IMG/M
3300009173\|Ga0114996_11067054	Not Available	571	Open in IMG/M
3300009409\|Ga0114993_10848740	All Organisms → cellular organisms → Bacteria → Proteobacteria	657	Open in IMG/M
3300009422\|Ga0114998_10176108	Not Available	1022	Open in IMG/M
3300009422\|Ga0114998_10262191	All Organisms → cellular organisms → Bacteria → Proteobacteria	813	Open in IMG/M
3300009425\|Ga0114997_10368780	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	781	Open in IMG/M
3300009425\|Ga0114997_10501685	Not Available	646	Open in IMG/M
3300009496\|Ga0115570_10194901	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	919	Open in IMG/M
3300009496\|Ga0115570_10351918	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	631	Open in IMG/M
3300009496\|Ga0115570_10492070	Not Available	512	Open in IMG/M
3300009498\|Ga0115568_10457056	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300009706\|Ga0115002_10428141	Not Available	974	Open in IMG/M
3300009785\|Ga0115001_10898171	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300012936\|Ga0163109_10851279	Not Available	666	Open in IMG/M
3300012936\|Ga0163109_11399313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	509	Open in IMG/M
3300012954\|Ga0163111_10341176	All Organisms → cellular organisms → Bacteria → Proteobacteria	1343	Open in IMG/M
3300014959\|Ga0134299_1033689	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	782	Open in IMG/M
3300017697\|Ga0180120_10040914	All Organisms → cellular organisms → Bacteria → Proteobacteria	2112	Open in IMG/M
3300017706\|Ga0181377_1098749	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	504	Open in IMG/M
3300017714\|Ga0181412_1119677	Not Available	608	Open in IMG/M
3300017720\|Ga0181383_1092125	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300017724\|Ga0181388_1046357	Not Available	1053	Open in IMG/M
3300017724\|Ga0181388_1113804	All Organisms → cellular organisms → Bacteria → Proteobacteria	644	Open in IMG/M
3300017725\|Ga0181398_1029240	All Organisms → Viruses → Predicted Viral	1355	Open in IMG/M
3300017727\|Ga0181401_1063492	All Organisms → cellular organisms → Bacteria → Proteobacteria	987	Open in IMG/M
3300017732\|Ga0181415_1114808	All Organisms → cellular organisms → Bacteria → Proteobacteria	607	Open in IMG/M
3300017735\|Ga0181431_1157891	Not Available	503	Open in IMG/M
3300017746\|Ga0181389_1050676	All Organisms → Viruses → Predicted Viral	1213	Open in IMG/M
3300017750\|Ga0181405_1066292	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	936	Open in IMG/M
3300017753\|Ga0181407_1025647	All Organisms → Viruses → Predicted Viral	1606	Open in IMG/M
3300017753\|Ga0181407_1132385	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	620	Open in IMG/M
3300017758\|Ga0181409_1068739	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1076	Open in IMG/M
3300017759\|Ga0181414_1129988	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300017764\|Ga0181385_1026826	All Organisms → cellular organisms → Bacteria → Proteobacteria	1832	Open in IMG/M
3300017765\|Ga0181413_1020256	All Organisms → Viruses → Predicted Viral	2084	Open in IMG/M
3300017767\|Ga0181406_1019260	Not Available	2166	Open in IMG/M
3300017767\|Ga0181406_1237592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	536	Open in IMG/M
3300017770\|Ga0187217_1018813	All Organisms → Viruses → Predicted Viral	2486	Open in IMG/M
3300017783\|Ga0181379_1093648	Not Available	1105	Open in IMG/M
3300017786\|Ga0181424_10174667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	916	Open in IMG/M
3300018428\|Ga0181568_11043370	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300019765\|Ga0194024_1043525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	989	Open in IMG/M
3300020055\|Ga0181575_10717269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	507	Open in IMG/M
3300020056\|Ga0181574_10369771	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	846	Open in IMG/M
3300020187\|Ga0206130_10380145	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300020194\|Ga0181597_10342345	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300020292\|Ga0211663_1056709	Not Available	578	Open in IMG/M
3300020438\|Ga0211576_10210305	Not Available	1033	Open in IMG/M
3300020440\|Ga0211518_10152272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	1170	Open in IMG/M
3300021959\|Ga0222716_10117209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1778	Open in IMG/M
3300021959\|Ga0222716_10550670	Not Available	639	Open in IMG/M
3300021964\|Ga0222719_10771582	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300022926\|Ga0255753_1387905	Not Available	509	Open in IMG/M
3300023172\|Ga0255766_10101255	All Organisms → Viruses → Predicted Viral	1735	Open in IMG/M
3300025048\|Ga0207905_1053779	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300025099\|Ga0208669_1081530	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	694	Open in IMG/M
3300025120\|Ga0209535_1106665	All Organisms → cellular organisms → Bacteria → Proteobacteria	988	Open in IMG/M
3300025120\|Ga0209535_1110759	Not Available	958	Open in IMG/M
3300025127\|Ga0209348_1182646	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	597	Open in IMG/M
3300025137\|Ga0209336_10081670	Not Available	942	Open in IMG/M
3300025138\|Ga0209634_1093198	All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon	1351	Open in IMG/M
3300025138\|Ga0209634_1131755	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300025168\|Ga0209337_1023626	Not Available	3529	Open in IMG/M
3300025425\|Ga0208646_1084012	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300025654\|Ga0209196_1050105	All Organisms → Viruses → Predicted Viral	1400	Open in IMG/M
3300025680\|Ga0209306_1224826	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	504	Open in IMG/M
3300025694\|Ga0209406_1011201	All Organisms → Viruses → Predicted Viral	4501	Open in IMG/M
3300025696\|Ga0209532_1080201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1182	Open in IMG/M
3300025699\|Ga0209715_1187486	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300025769\|Ga0208767_1279442	Not Available	503	Open in IMG/M
3300025818\|Ga0208542_1067322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1081	Open in IMG/M
3300025860\|Ga0209119_1176582	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	852	Open in IMG/M
3300025886\|Ga0209632_10105803	All Organisms → Viruses → Predicted Viral	1632	Open in IMG/M
3300025894\|Ga0209335_10087039	All Organisms → Viruses → Predicted Viral	1687	Open in IMG/M
3300026187\|Ga0209929_1093268	All Organisms → cellular organisms → Bacteria → Proteobacteria	790	Open in IMG/M
3300026257\|Ga0208407_1091623	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300027687\|Ga0209710_1239130	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300027752\|Ga0209192_10036264	All Organisms → Viruses → Predicted Viral	2305	Open in IMG/M
3300027752\|Ga0209192_10134195	Not Available	991	Open in IMG/M
3300027752\|Ga0209192_10135709	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300027752\|Ga0209192_10154314	All Organisms → cellular organisms → Bacteria → Proteobacteria	904	Open in IMG/M
3300027779\|Ga0209709_10152862	All Organisms → Viruses → Predicted Viral	1129	Open in IMG/M
3300027780\|Ga0209502_10137891	All Organisms → cellular organisms → Bacteria	1188	Open in IMG/M
3300027801\|Ga0209091_10111367	All Organisms → cellular organisms → Bacteria → Proteobacteria	1459	Open in IMG/M
3300027847\|Ga0209402_10276915	Not Available	1058	Open in IMG/M
3300028125\|Ga0256368_1039596	Not Available	839	Open in IMG/M
3300028197\|Ga0257110_1335916	Not Available	532	Open in IMG/M
3300029448\|Ga0183755_1017918	All Organisms → Viruses → Predicted Viral	2442	Open in IMG/M
3300031519\|Ga0307488_10332724	Not Available	964	Open in IMG/M
3300031588\|Ga0302137_1312240	Not Available	511	Open in IMG/M
3300031605\|Ga0302132_10126376	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300031623\|Ga0302123_10470370	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300031625\|Ga0302135_10118427	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300031625\|Ga0302135_10384163	All Organisms → cellular organisms → Bacteria → Proteobacteria	545	Open in IMG/M
3300031626\|Ga0302121_10103555	Not Available	835	Open in IMG/M
3300031637\|Ga0302138_10073814	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	94.55%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.64%
Freshwater	Environmental → Aquatic → Freshwater	0.91%
Sediment	Environmental → Aquatic → Sediment	0.91%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	40.00%
Strait	Environmental → Aquatic → Marine → Strait	19.09%
Pelagic	Environmental → Aquatic → Marine → Pelagic	10.00%
Coastal	Environmental → Aquatic → Marine → Coastal	7.27%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	6.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified	6.36%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	5.45%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	3.64%
River	Environmental → Aquatic → Freshwater → River	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	37.27%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	19.09%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	10.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.27%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	6.36%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	5.45%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	5.45%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	3.64%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.73%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	36.36%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	19.09%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	9.09%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	5.45%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	4.55%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	3.64%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.64%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	2.73%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.73%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	2.73%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.91%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.91%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.91%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.91%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.91%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.91%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.91%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.91%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.91%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.91%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300001947	Marine microbial communities from the Gulf of Maine, Canada - GS002	Environmental	Open in IMG/M
3300005433	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45B	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009172	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300014959	Marine microbial communities to study oil droplet degradation from Trondheimsfjord, Norway - 0148 : 4 days incubation	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300017706	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaG	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental	Open in IMG/M
3300017746	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019765	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MG	Environmental	Open in IMG/M
3300020055	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020187	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020292	Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555930-ERR599113)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022926	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG	Environmental	Open in IMG/M
3300023172	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG	Environmental	Open in IMG/M
3300025048	Marine viral communities from the Subarctic Pacific Ocean - LP-49 (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025425	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK8 (SPAdes)	Environmental	Open in IMG/M
3300025654	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509 (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300025696	Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)	Environmental	Open in IMG/M
3300025699	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025860	Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300025894	Pelagic Microbial community sample from North Sea - COGITO 998_met_09 (SPAdes)	Environmental	Open in IMG/M
3300026187	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300026257	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)	Environmental	Open in IMG/M
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental	Open in IMG/M
3300027752	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental	Open in IMG/M
3300027801	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128 (SPAdes)	Environmental	Open in IMG/M
3300027847	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)	Environmental	Open in IMG/M
3300028125	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB	Environmental	Open in IMG/M
3300028197	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031588	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_SCM	Environmental	Open in IMG/M
3300031605	Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1	Environmental	Open in IMG/M
3300031623	Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1	Environmental	Open in IMG/M
3300031625	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_surface	Environmental	Open in IMG/M
3300031626	Marine microbial communities from Western Arctic Ocean, Canada - CB21_surface	Environmental	Open in IMG/M
3300031637	Marine microbial communities from Western Arctic Ocean, Canada - CBN3_32.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_102126242	3300000116	Marine	MSKAINTVKDKSQLQSLLSKISKGKNLLSQWITLDPIYVGGITK
JGI20160J14292_101061402	3300001349	Pelagic Marine	MAKAIKTVKEKSQLQSLLSKITKGKSLLQQWIELDPIYVGEKNSADYEQSIHRHLMDSAEQIR
JGI24006J15134_100759281	3300001450	Marine	MSKAIKTVKSKSQLQSLLSNISKGKSLLQQWIELDPIYVGEK
JGI24005J15628_100974401	3300001589	Marine	MAKWIRTVKKKSQLKSLLSTVSQGKELLRKWIELDPIYVGERTSADYEQSIHKHLLDSV
GOS2218_10025721	3300001947	Marine	MSKKIKTVKTKKELQSLLVNIRKGKDLLKQWIDLDPIYVGEKTKANYVESIHKQLLESTK
Ga0066830_100105361	3300005433	Marine	MAKAIKTVKEKSQLETLLSGIDKGKTLLQQWINLDPIYVGEKKSADYEKSI
Ga0075479_102440521	3300006870	Aqueous	MVKKIKTVKGKEELQSLLSTVSRGKELLQEWINLDPIYVGERTSANYEL
Ga0075468_102184351	3300007229	Aqueous	MAKAIKTVKEKSQLQSLLSKISKGKPLLQQWIDLDPIYVG
Ga0102960_11411211	3300009000	Pond Water	MAKAIKTVKEKSQLLSLLKNISKGKDLLRDWINLEPIYVGKKTSADYTYSIQKHLLESV
Ga0102963_13349851	3300009001	Pond Water	MAKTIKTVKDKTKLQSLLVGVAKGRDLLQSWINLDPIYVGHISSAEYEES
Ga0115552_10861293	3300009077	Pelagic Marine	MPKAINTVKDKSQLQSLLSKISKGKNLLSQWITLDPIYVGGI
Ga0115552_11375572	3300009077	Pelagic Marine	MSKAINTVKDKSQLQSLLSKISKGKNLLSQWITLDPIYVGGI
Ga0118687_103278792	3300009124	Sediment	MYMAKAIKTVKEKSQLQSLLLGVEKGKTLLEDWIALDPIY
Ga0114995_100930571	3300009172	Marine	VSKAINTVKSKSQLQSLLSKISKGKSLLQQWIELDPIYVGEKTKADY
Ga0114996_101508611	3300009173	Marine	MAKAIKTVKEKLQLQSLLLKISKGKSLLQQWIELDPIYVGEKTKADYGESIHKH
Ga0114996_110670542	3300009173	Marine	MAKTIRTVKEKSQLKSLLSTVSQGKELLSKWIELDPIYVGERTSADYE
Ga0114993_108487402	3300009409	Marine	MAKAIKTVKEKSQLQSLLSKISKGKSLLQQWIELDPI
Ga0114998_101761081	3300009422	Marine	MSKAIKTVKSKSQLQSLLSKISKGKSLLQQWIELDPIYVGEKTKADY
Ga0114998_102621911	3300009422	Marine	MAKAIKIVKEKSQLQSLLSKISKGKSLLQQWIDLDPIYVGEKNSAD
Ga0114997_103687803	3300009425	Marine	MSKAIKTVKEKSQLQSLLSGITNGKELLQEWIDLDPVYVGERTSANYAMSIRQHLLDSVKEV
Ga0114997_105016852	3300009425	Marine	MAKTIRTVKEKSQLRSLLSTVSQGKELLSKWIELDPIYVGERTSADYEQSI
Ga0115570_101949012	3300009496	Pelagic Marine	MPKAINTVKDKSQLQSLLSKISKGKNLLSQWITLDPIYVGGITKANYLESIHK
Ga0115570_103519182	3300009496	Pelagic Marine	MSKAINTVKDKSQLQSLLSKISKGKNLLSQWITLDPIYVGG
Ga0115570_104920702	3300009496	Pelagic Marine	MVKAIKTVKTRSQLQSLLSGVDKGKALLEEWIALDPIYVGEKNSADYEQSIHRHLIESTE
Ga0115568_104570561	3300009498	Pelagic Marine	MAKAIKTVKEKLQLQSLLSKISKGKSLLQQWIELDPI
Ga0115002_104281411	3300009706	Marine	MSKAIKTVKSKSQLQSLLSNISKGKSLLQQWIELDPIYVG
Ga0115001_108981711	3300009785	Marine	VSKAIKTVKSKSQLQSLLSKISKGKSLLQQWIELDPIYVGEKTKADY
Ga0163109_108512791	3300012936	Surface Seawater	MAKAIKTVKEKKELQSLLSTITTGKDLLRSWIDLDPIYVGEKTSANYE
Ga0163109_113993131	3300012936	Surface Seawater	MSKSIKTVKTRSQLQSLLSNINEGRELLNEWIDLDPIFVGEKTKANYLE
Ga0163111_103411762	3300012954	Surface Seawater	MAKAIKTVKEKSQLETLLSGIDKGKTLLQQWINLDPIYVGEKKSADYEKSIHRHLL
Ga0134299_10336891	3300014959	Marine	MSKAINTVKDKSQLQSLLSKISKGKNLLSQWITLDPI
Ga0180120_100409141	3300017697	Freshwater To Marine Saline Gradient	MVKKIKTVKGKEELQSLLSTVSRGKELLQEWINLDPIYVGERTSANYELSIHKHLIDSTKEI
Ga0181377_10987492	3300017706	Marine	MAKAINTVKDKSQVQSLLSKISKGKNLLSQWIDLDPIYVGEKTKADYKESIHKQLIESTQ
Ga0181412_11196772	3300017714	Seawater	MTKAIKSVKEKTQLQSLLSNVSKGKELLQDWINLEPIYVGKKTSADY
Ga0181383_10921252	3300017720	Seawater	MAKAIKTVKEKSQLQSLLSKITIGKSLLQQWIELDPIYVGEKNSADYEQSIHRHLMDSAE
Ga0181388_10463571	3300017724	Seawater	MAKAIKTVKEKSQLHSLISSVTKGQELLRDWIDLEPIYVGKKTSAD
Ga0181388_11138042	3300017724	Seawater	MAKAIKTVKEKSQLQSLLSKITKGKSLLQQWIELDPIYVGE
Ga0181398_10292403	3300017725	Seawater	MSKSIKTVKTSSQLQSLLSNISNGKELLKEWIDLDPIFVGEKTKANY
Ga0181401_10634922	3300017727	Seawater	MAKAIKTVKEKSQLQSLLSKITKGKSLLQQWIELDPIYVGEKNSADYEQSIHRHLMDSAEQI
Ga0181415_11148082	3300017732	Seawater	MSKAIKTVKEKKQLQPLLSTITAGKDLLKSWIDLDPIYVGEKTS
Ga0181431_11578912	3300017735	Seawater	MTKAIKSVKEKTQLQSLLSNVSKGKELLQDWINLEP
Ga0181389_10506764	3300017746	Seawater	MSKAIKTVKEKSQLQSLLLGITNGKELLQEWIDLDPVYVGKRTSADY
Ga0181405_10662922	3300017750	Seawater	MAKWIRTVKKKSQLKSLLSTVSQGKELLRKWIELDPIYVGERTSADYEQSIHKHLLDSVKEVTVDG
Ga0181407_10256475	3300017753	Seawater	MSKAIKTVKEKSQLQSLLLGIKNGKELLQEWIDLDPVYVGKRTSADYEQSIHKHLLD
Ga0181407_11323851	3300017753	Seawater	MAKWIRTVKKKSQLKSLLSTVSQGKELLRKWIELDPIYVGERTSADYEQSIHKHLLD
Ga0181409_10687391	3300017758	Seawater	MSKKIKTVKEKLQLKSLLSTIGKGKDLLQDWISLDPIYV
Ga0181414_11299881	3300017759	Seawater	MSKAIKTVKEKKQLQPLLSTITAGKDLLKSWIDLDPIYVGEKTSANYELSIHKHLIEST
Ga0181385_10268264	3300017764	Seawater	MSKKIKTVKSKSQLQSLLSTISKGKDLLNQWIKLDPIYVGEKTKANYVESIHK
Ga0181413_10202565	3300017765	Seawater	MSKAIKTVKEKSQLQSLLLGITNGKELLQEWIDLDPVYVGKRTSADYEQSIHKHLLD
Ga0181406_10192601	3300017767	Seawater	MSKAIKTVKEKSQLQSLLLGITNGKELLQEWIDLDPVYVGERTSADYE
Ga0181406_12375922	3300017767	Seawater	MSKKIKTVKSKSQLQTLLFKVSKGKDLLDQWIDLDPIFVGEKQS
Ga0187217_10188134	3300017770	Seawater	MAKAIKTVKEKSQLHSLISSVTKGQELLRDWIDLEPIY
Ga0181379_10936483	3300017783	Seawater	MAKAIKTVKAKSQLQSLLSCVGKGKELLQDWINLEPIYVGKKTS
Ga0181424_101746671	3300017786	Seawater	MSKKIKTVKSKSQLQTLLSKVSKGKDLLNQWIELDPIFVGEQQSADYMMSIHKHLL
Ga0181568_110433701	3300018428	Salt Marsh	VSKAIKTVKSKSQLQSLLSGVEKGKTLLEDWIALDPIYVGKSTSANYRE
Ga0194024_10435253	3300019765	Freshwater	MVKAIKTVKTRSQLQSLLSGVDKGKALLEEWIALDPIYVGEKNSADYEQ
Ga0181575_107172691	3300020055	Salt Marsh	MAKAIKTVKNKLQLQSLLVGIEEGRELLEQWINLDPIYKGEITSADYRASIH
Ga0181574_103697711	3300020056	Salt Marsh	MSKKIKTVKGKEQLQSLLSTISRGKELLQDWIDLEPIFAGKK
Ga0206130_103801452	3300020187	Seawater	MAKAIKTVKEKSQLQSLLSKITKGKSLLQQWIELDPIYVGEKNSADYEQS
Ga0181597_103423452	3300020194	Salt Marsh	MAKAIKTVKEKSQLQSLLSGVEKGKTLLEDWIALDPIYVGKSTSANYRESIH
Ga0211663_10567092	3300020292	Marine	MAKAIKTVKEKKELQSLLSTITTGKDLLRSWIDLDPIYVGEKTSANYELSIHK
Ga0211576_102103052	3300020438	Marine	MAKAIKTVKEKSQLHSLISSVTKGQELLRDWIDLEPIYVGKKTSE
Ga0211518_101522722	3300020440	Marine	MSKKIKTVKNKSELQSLLSKVSKGKELLHQWIDLDPIFVGETQSADYMMSIRK
Ga0222716_101172094	3300021959	Estuarine Water	MVKAIKTVKTRSQLQSLLSGVDKGKALLEEWIALDPIYVGEKNSANYEQS
Ga0222716_105506702	3300021959	Estuarine Water	MAKPIRTVKSKLQLQSLLQGIDAGKELLQSWINLEPIYVGQKTSAE
Ga0222719_107715822	3300021964	Estuarine Water	MYMAKAIKTVKEKSQLQSLLLGVEKGKTLLEDWIALDP
Ga0255753_13879052	3300022926	Salt Marsh	MVKAIKTVKTRSQLQSLLSGVDKGKALLEEWIALDPIYVGEKNSADY
Ga0255766_101012554	3300023172	Salt Marsh	MVKAIKTVKTRSQLQSLLSDVNKGKALLEEWIALDPIYVGEKNSADYEQSIHRHLIES
Ga0207905_10537791	3300025048	Marine	MAKAIKTVKEKSQLQSLLSKISKGKSLLQQWIELDPIYVGEKNSADYKQSIHRHLLDSTEQV
Ga0208669_10815301	3300025099	Marine	MSKAINTVKDKSQLQSLLSKISKGKNLLSQWITLD
Ga0209535_11066652	3300025120	Marine	MAKAIKTVKEKSQLQSLLSKISKGKPLLQQWIDLDPIYVGKK
Ga0209535_11107591	3300025120	Marine	MAKTIRTVKEKSQLKSLLSTVSQGKELLSKWIELDPIYVGERTSADYEQSIHKHLLESVKEVTVNG
Ga0209348_11826462	3300025127	Marine	MTKKIKTVKEKKQLQKLLSTISQGKDLLQDWINLEPIYVGEKTSADYTSSIQKHLLDSVKEV
Ga0209336_100816701	3300025137	Marine	MSKAIKTVKEKSQLQSLLLGITNGKELLQEWIDLDPVYVGKRTSADYEQSIHKHLLDSVKKVTVDGHWC
Ga0209634_10931983	3300025138	Marine	MAKWIRTVKKKSQLKSLLSTVSQGKELLSKWIELDPIYVGERTSADYEQSIHKH
Ga0209634_11317551	3300025138	Marine	MAKTIRTVKEKSQLRSLLSTVSQGKELLSKWIELDPIYVGERTSADY
Ga0209337_10236266	3300025168	Marine	MAKWIRTVKKKSQLKSLLSTVSQGKELLSKWIELDPIYVGERTSADYEQSIHKHLLDSVK
Ga0208646_10840121	3300025425	Saline Lake	MSKAIKTVKSKGQLKRLLENTTGTGRELLEQWIALDPIYVGEPTSADYKQSIHR
Ga0209196_10501051	3300025654	Pelagic Marine	MAKAIKTVKEKSQLQSLLSKITKGKSLLQQWIDLDPIYVGEKNSADYEQSIHRHLMDS
Ga0209306_12248261	3300025680	Pelagic Marine	MPKAINTVKDKSQLQSLLSKISKGKNLLSQWITLDPIYVGGITKA
Ga0209406_10112015	3300025694	Pelagic Marine	MAKAINTVKDKSQLQSLLSKISKGKNLLSQWITLDP
Ga0209532_10802013	3300025696	Pelagic Marine	MVKAIKTVKTRSQLQSLLSGVDKGKALLEEWIALDPIYVGEKNSADYEQSIHRHLIESTEQVTLQ
Ga0209715_11874862	3300025699	Pelagic Marine	MAKAIKTVKEKLQLQSLLSKITKGKSLLQQWIELDPIYVGEKNSADYEQSIHRHLMDSAE
Ga0208767_12794422	3300025769	Aqueous	MVKKIKTVKGKEELQSLLSTVSRGKELLQEWINLDPIYVGERTSANYELSIHKH
Ga0208542_10673223	3300025818	Aqueous	MVKAIKTVKTRSQLQSLLSDVNKGKALLEEWIALDPIYVGEKNSADYEQSIHRHLIESTEQVT
Ga0209119_11765821	3300025860	Pelagic Marine	MSKAINTVKDKSQLQSLLSKISKGKNLLSQWITLDPIYVGGKTKANYLESIHKQ
Ga0209632_101058031	3300025886	Pelagic Marine	MAKAINTVKDKSQLQSLLSKISKGKNLLSQWITLDPI
Ga0209335_100870393	3300025894	Pelagic Marine	MAKAINTVKDKSQLQSLLSKISKGKNLLSQWITLDPIYVGGITKANYLESIHKQLIEST
Ga0209929_10932682	3300026187	Pond Water	MYMAKAIKTVKEKSQLQSLLSGVEKGKTLLEDWIALDPIYVGKSTSANYRESIHIWC
Ga0208407_10916232	3300026257	Marine	MAKAIKTVKEKSQLETLLSGIDKGKTLLQQWINLDPIYVGEKKSADYEKS
Ga0209710_12391302	3300027687	Marine	MSKAIKTVKGKEQLKELLKSTAGTGRELLEQWIALDPIYVGERTSADYEQSIHRHLVES
Ga0209192_100362643	3300027752	Marine	VSKAINTVKSKSQLQSLLSKISKGKSLLQQWIELDPIYVGEKTKADYG
Ga0209192_101341951	3300027752	Marine	MSKAIKTVKSKSQLQSLLSKISKGKSLLQQWIELDPIYVGEK
Ga0209192_101357091	3300027752	Marine	VSKAIKTVKSKSQLQSLLSKISKGKSLLQQWIELDPIYVGEK
Ga0209192_101543142	3300027752	Marine	MAKAIKTVKEKSQLQSLLSKISKGKSLLQQWIELDPIYVGEKNSADYK
Ga0209709_101528621	3300027779	Marine	VSKAIKTVKSKGQLKRLLVNTSGTGRELLEQWIALDPIYVGEPTSADYK
Ga0209502_101378913	3300027780	Marine	MSKAIKTVKSKSQLQSLLSKISKGKSLLQQWIELDPIYVGEKTKADYGKSI
Ga0209091_101113671	3300027801	Marine	MAKAIKIVKEKSQLQSLLSKISKGKSLLQQWIELDPIYVGEKNSADYK
Ga0209402_102769153	3300027847	Marine	MSKAIKTVKSKSQLQSLLLKISKGKSLLQQWIELDPIYVGEKTKADYGKSIHKHL
Ga0256368_10395962	3300028125	Sea-Ice Brine	MSKAIKTVKSKSQLQSLLSNISKGKSLLQQWIELDPIYVGEKTKADYGKSIHKHL
Ga0257110_13359161	3300028197	Marine	MAKAIKTVKEKSQLQSLLSKIIKGRSLLQQWIDLDPIYVGEKNSADYEQSIHKHLLDSAD
Ga0183755_10179181	3300029448	Marine	MAKKIKTVKGKEQLQSLLSTISRGKNLLQDWIDLEPIYVGEETSANYT
Ga0307488_103327241	3300031519	Sackhole Brine	MSKAIKTVKSKSQLQSLLSKISKGKSLLQQWIELD
Ga0302137_13122401	3300031588	Marine	MSKAIKTVKSKSQLQSLLLKISKGKSLLQQWIELDPIYVGEKTKADYGESIHKHLIESAD
Ga0302132_101263763	3300031605	Marine	MSKAIKTVKSKSQLQSLLSKISKGKSLLQQWIELDPIYVGEKTKADYGKSIH
Ga0302123_104703702	3300031623	Marine	MAKAIKTVKEKSQLQSLLSKISKGKSLLQQWIELDPIYVG
Ga0302135_101184273	3300031625	Marine	MSKAIKTVKSKSQLQSLLSNISKGKSLLQQWIELDPIYVGGKTKADY
Ga0302135_103841631	3300031625	Marine	MAKAIKTVKEKSQLQSLLSKISKGKPLLQQWIDLDHIYV
Ga0302121_101035551	3300031626	Marine	MSKAIKTVKEKSQLQSLLSGITNGKELLQEWIDLDPVYVGER
Ga0302138_100738143	3300031637	Marine	MSKAIKTVKSKSQLQSLLSKISKGKSLLQQWIELDPIYVGE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087895

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences