Metagenome Family F087856

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087856
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	84 residues
Representative Sequence	MSKLRRADYTEHLVGKTIKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVDEEAELSDFASGNPSKHRKLIPLPLVRQPIKPLL
Number of Associated Samples	82
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.45 %
% of genes near scaffold ends (potentially truncated)	20.00 %
% of genes from short scaffolds (< 2000 bps)	74.55 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.636 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (22.727 % of family members)
Environment Ontology (ENVO)	Unclassified (53.636 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.182 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.93% β-sheet: 28.57% Coil/Unstructured: 62.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00239	Resolvase	10.91
PF13482	RNase_H_2	2.73
PF01420	Methylase_S	1.82
PF08706	D5_N	0.91
PF02646	RmuC	0.91
PF09369	MZB	0.91
PF13384	HTH_23	0.91
PF03695	UPF0149	0.91
PF00089	Trypsin	0.91
PF13365	Trypsin_2	0.91
PF00589	Phage_integrase	0.91
PF13020	NOV_C	0.91
PF00174	Oxidored_molyb	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	10.91
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	10.91
COG0732	Restriction endonuclease S subunit	Defense mechanisms [V]	1.82
COG1322	DNA anti-recombination protein (rearrangement mutator) RmuC	Replication, recombination and repair [L]	0.91
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.91
COG3079	Uncharacterized conserved protein YgfB, UPF0149 family	Function unknown [S]	0.91
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.55 %
Unclassified	root	N/A	25.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.64 %
Unclassified	root	N/A	25.45 %
Viruses	superkingdom	All Organisms → Viruses	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.64 %
Unclassified	root	N/A	25.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	64.55 %
Unclassified	root	N/A	25.45 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	52.73 %
Unclassified	root	N/A	25.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.64 %
uncultured bacterium W5-15b	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium W5-15b	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.73 %
Unclassified	root	N/A	25.45 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.64 %
uncultured bacterium W5-15b	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium W5-15b	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.73 %
Unclassified	root	N/A	25.45 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.64 %
uncultured bacterium W5-15b	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium W5-15b	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.73 %
Unclassified	root	N/A	25.45 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.91 %
uncultured bacterium W5-15b	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium W5-15b	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.73 %
Unclassified	root	N/A	25.45 %
unclassified Edaphobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → unclassified Edaphobacter	0.91 %
uncultured bacterium W5-15b	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium W5-15b	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	52.73 %
Unclassified	root	N/A	25.45 %
Edaphobacter sp. 4G125	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → unclassified Edaphobacter → Edaphobacter sp. 4G125	0.91 %
uncultured bacterium W5-15b	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium W5-15b	0.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10061030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1944	Open in IMG/M
3300001180\|JGI12695J13573_1001234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1914	Open in IMG/M
3300001593\|JGI12635J15846_10013817	All Organisms → cellular organisms → Bacteria	6740	Open in IMG/M
3300001593\|JGI12635J15846_10397847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	832	Open in IMG/M
3300003219\|JGI26341J46601_10119442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300004080\|Ga0062385_11030898	Not Available	554	Open in IMG/M
3300004152\|Ga0062386_100703044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300005591\|Ga0070761_10053798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2268	Open in IMG/M
3300005994\|Ga0066789_10214903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300005995\|Ga0066790_10079034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1415	Open in IMG/M
3300006059\|Ga0075017_100788535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300006086\|Ga0075019_11113369	Not Available	513	Open in IMG/M
3300006102\|Ga0075015_100090529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1521	Open in IMG/M
3300009029\|Ga0066793_10534331	Not Available	669	Open in IMG/M
3300009519\|Ga0116108_1093298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	915	Open in IMG/M
3300009519\|Ga0116108_1176701	Not Available	630	Open in IMG/M
3300009521\|Ga0116222_1035795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2189	Open in IMG/M
3300009522\|Ga0116218_1297584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300009523\|Ga0116221_1176401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300009524\|Ga0116225_1128403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1164	Open in IMG/M
3300009623\|Ga0116133_1113175	Not Available	695	Open in IMG/M
3300009631\|Ga0116115_1089642	Not Available	792	Open in IMG/M
3300009639\|Ga0116122_1228783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300009645\|Ga0116106_1058490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1277	Open in IMG/M
3300009645\|Ga0116106_1250064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300009646\|Ga0116132_1157763	Not Available	690	Open in IMG/M
3300009700\|Ga0116217_10028589	All Organisms → cellular organisms → Bacteria → Acidobacteria	4279	Open in IMG/M
3300009700\|Ga0116217_10221156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1238	Open in IMG/M
3300009700\|Ga0116217_10291729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300009700\|Ga0116217_10612092	Not Available	678	Open in IMG/M
3300009824\|Ga0116219_10212593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1105	Open in IMG/M
3300009839\|Ga0116223_10210067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1186	Open in IMG/M
3300009839\|Ga0116223_10458460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300009839\|Ga0116223_10499143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300010339\|Ga0074046_10492763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300010341\|Ga0074045_10163387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1507	Open in IMG/M
3300010341\|Ga0074045_10609423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300010341\|Ga0074045_10669474	Not Available	660	Open in IMG/M
3300010343\|Ga0074044_10001016	All Organisms → cellular organisms → Bacteria	25768	Open in IMG/M
3300010343\|Ga0074044_10381654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300010343\|Ga0074044_10687580	Not Available	668	Open in IMG/M
3300010343\|Ga0074044_10995319	Not Available	549	Open in IMG/M
3300010379\|Ga0136449_100060175	All Organisms → cellular organisms → Bacteria	8338	Open in IMG/M
3300010379\|Ga0136449_100108231	All Organisms → cellular organisms → Bacteria	5662	Open in IMG/M
3300010379\|Ga0136449_101105439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1261	Open in IMG/M
3300010379\|Ga0136449_102273877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300012210\|Ga0137378_10630803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300014152\|Ga0181533_1191302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300014153\|Ga0181527_1322914	Not Available	603	Open in IMG/M
3300014155\|Ga0181524_10019608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5007	Open in IMG/M
3300014159\|Ga0181530_10661947	Not Available	506	Open in IMG/M
3300014489\|Ga0182018_10016245	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5056	Open in IMG/M
3300014491\|Ga0182014_10023807	All Organisms → cellular organisms → Bacteria → Acidobacteria	5030	Open in IMG/M
3300014491\|Ga0182014_10507923	Not Available	590	Open in IMG/M
3300014501\|Ga0182024_10032159	All Organisms → cellular organisms → Bacteria → Acidobacteria	8944	Open in IMG/M
3300014501\|Ga0182024_10048806	All Organisms → cellular organisms → Bacteria	6758	Open in IMG/M
3300014501\|Ga0182024_10791069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1157	Open in IMG/M
3300014502\|Ga0182021_12103202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300014638\|Ga0181536_10067632	All Organisms → cellular organisms → Bacteria → Acidobacteria	2203	Open in IMG/M
3300014638\|Ga0181536_10084380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1869	Open in IMG/M
3300017822\|Ga0187802_10249416	Not Available	687	Open in IMG/M
3300017925\|Ga0187856_1054997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1725	Open in IMG/M
3300017931\|Ga0187877_1104295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1181	Open in IMG/M
3300017931\|Ga0187877_1195224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300017938\|Ga0187854_10039885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2409	Open in IMG/M
3300017940\|Ga0187853_10275142	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300017946\|Ga0187879_10003096	All Organisms → cellular organisms → Bacteria → Proteobacteria	11213	Open in IMG/M
3300017946\|Ga0187879_10037330	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium W5-15b	2910	Open in IMG/M
3300017955\|Ga0187817_10037472	All Organisms → cellular organisms → Bacteria	2959	Open in IMG/M
3300017995\|Ga0187816_10229070	Not Available	810	Open in IMG/M
3300017996\|Ga0187891_1067955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1430	Open in IMG/M
3300018002\|Ga0187868_1198819	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300018006\|Ga0187804_10369236	Not Available	632	Open in IMG/M
3300018009\|Ga0187884_10129544	Not Available	1076	Open in IMG/M
3300018017\|Ga0187872_10006857	All Organisms → cellular organisms → Bacteria → Acidobacteria	7750	Open in IMG/M
3300018022\|Ga0187864_10279647	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300018022\|Ga0187864_10297227	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	722	Open in IMG/M
3300018023\|Ga0187889_10246923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300018035\|Ga0187875_10557763	Not Available	606	Open in IMG/M
3300018037\|Ga0187883_10371387	Not Available	732	Open in IMG/M
3300018042\|Ga0187871_10289747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300018042\|Ga0187871_10386388	Not Available	773	Open in IMG/M
3300018043\|Ga0187887_10321122	Not Available	914	Open in IMG/M
3300018057\|Ga0187858_10701372	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	604	Open in IMG/M
3300018086\|Ga0187769_10050976	All Organisms → cellular organisms → Bacteria	2874	Open in IMG/M
3300019082\|Ga0187852_1082758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1436	Open in IMG/M
3300021402\|Ga0210385_10166133	All Organisms → cellular organisms → Bacteria → Acidobacteria	1588	Open in IMG/M
3300023101\|Ga0224557_1101569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1160	Open in IMG/M
3300023250\|Ga0224544_1051342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300026291\|Ga0209890_10007761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4466	Open in IMG/M
3300026294\|Ga0209839_10172248	Not Available	706	Open in IMG/M
3300027604\|Ga0208324_1084766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300027629\|Ga0209422_1011618	All Organisms → cellular organisms → Bacteria → Acidobacteria	2171	Open in IMG/M
3300027629\|Ga0209422_1012575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2090	Open in IMG/M
3300027812\|Ga0209656_10434334	Not Available	583	Open in IMG/M
3300027824\|Ga0209040_10070134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2053	Open in IMG/M
3300027825\|Ga0209039_10057853	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1745	Open in IMG/M
3300027853\|Ga0209274_10049597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1990	Open in IMG/M
3300027854\|Ga0209517_10013151	All Organisms → cellular organisms → Bacteria → Acidobacteria	8668	Open in IMG/M
3300027854\|Ga0209517_10015578	All Organisms → cellular organisms → Bacteria → Acidobacteria	7625	Open in IMG/M
3300027854\|Ga0209517_10026683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5024	Open in IMG/M
3300027905\|Ga0209415_10118993	Not Available	2798	Open in IMG/M
3300030659\|Ga0316363_10145606	All Organisms → Viruses → Predicted Viral	1020	Open in IMG/M
3300030707\|Ga0310038_10357769	Not Available	644	Open in IMG/M
3300031261\|Ga0302140_10279749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1430	Open in IMG/M
3300031708\|Ga0310686_106809103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → unclassified Edaphobacter → Edaphobacter sp. 4G125	12525	Open in IMG/M
3300031708\|Ga0310686_116765503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300032160\|Ga0311301_10677929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1457	Open in IMG/M
3300032892\|Ga0335081_10922004	Not Available	1027	Open in IMG/M
3300033405\|Ga0326727_10734941	Not Available	779	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.36%
Aquatic	Environmental → Aquatic	43.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.73%
Freshwater	Environmental → Aquatic → Freshwater	40.91%
Peat	Environmental → Terrestrial → Peat	3.64%
Sediment	Environmental → Aquatic → Sediment	2.73%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	40.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	20.00%
Loam	Environmental → Terrestrial → Soil → Loam	6.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.73%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	30.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.45%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.09%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.91%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	22.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	19.09%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.27%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	7.27%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.64%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.82%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.91%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.91%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.91%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.91%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.91%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001180	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100610302	3300000567	Peatlands Soil	MSKLRRADYTEHLVGKTIKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVDEEAELSDFASGNPSKHRKLIPLPLVRQPIKPLL*
JGI12695J13573_10012341	3300001180	Forest Soil	MSKLRRADYTEHLVGKTVKRVHWSNDEQRKCLTLEFTDQTLCSFKFALAMDEEAELSDFASVNPSKHRKLIPLPLVR
JGI12635J15846_100138176	3300001593	Forest Soil	MSKLRRADYTEHLVGKTVKRVHWSNDEQRKCLTLEFTDQTLCSFKFALAMDEEAELSDFASVNPSKHRKLIPLPLVRQPIKPLV*
JGI12635J15846_103978471	3300001593	Forest Soil	MSKLRRADYTEHLAGKTIKRVHWNNDEERKCLTFEFTDQTLCSFKFALAMDEEAELSEFVSGNPSTHRKLIALPLVRQPIKPLV*
JGI26341J46601_101194421	3300003219	Bog Forest Soil	MSRLRRADYTEHLAGKTIKRVHWNNHEQMKCLTLEFTDLTLCSFKFELAVDEEAELSDFASGSPSKRRKLIPLPLVRQPIKPLV*
Ga0062385_110308982	3300004080	Bog Forest Soil	MSKLRRADFTEHLAGKTIKRVHWNNDERWRRLTFEFTDQTLCSFKFELEVDEEAELSDFVNGNRSKLRKLIPLPLVRQPVKPLV*
Ga0062386_1007030443	3300004152	Bog Forest Soil	MSKLRRADYTEHLAGKTIKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVDEEAELSDFASGNPSKYRKIIPLPLIRQPIKPLL*
Ga0070761_100537982	3300005591	Soil	MSKLRRADYTEHLAGKTIKRVHWNNDEERKCLTFEFTDQTLCSFKFELAMEEEAELLEFVSDNPSKHRKLIPLPLVRQPIKPLL*
Ga0066789_102149032	3300005994	Soil	MSKLRRADYSENLAGKTIKRVHWCNHEQRKCLTLEFTDQTLCSFKFEVAVDEEAELWDFGSGSPSKRRKLIPLPLVRLPVKPLL*
Ga0066790_100790342	3300005995	Soil	MSKLRRADYTEHLAGKTIKRVHWNNDEERKCLTFEFTDQTLCSFKFELAMDEEAELSEFVSGNPSKHRKLIPLPLVRQPIKPLV*
Ga0075017_1007885352	3300006059	Watersheds	MSKLSRADYTDHLAGKTIKRVHWNNDERKYLTLEFTDQTLCSFRFEIAVDEDAELSEFVSGNPSKHRKLIPMPLVRQPIKPLV*
Ga0075019_111133692	3300006086	Watersheds	MSKLRRADYTEHLAGKTIKRVHWNNDEKWRRLTLEFTDQTLCSFRFELAVDEEAELSDFASGNPSKPRKLIPLPLVRQPIKPLL*
Ga0075015_1000905292	3300006102	Watersheds	MSKIARADYTEHLAGKTIKRVHWNNDERKCLTLEFTDQTLCSFRFEIAVDEDAELSEFVSGNPSKHRKLIPMPLVRQPIKPLV*
Ga0066793_105343311	3300009029	Prmafrost Soil	MSKLHRADHTEHLAGKTIKRVHWNNHEQMKCLTLEFTDLTLCSFTFELAVDEEAELSDFASGSPPKRRKLIPLPLVRLPVKPLL*
Ga0116108_10932981	3300009519	Peatland	SCSVNAVGIIRLTMSKLRRADYTEHLAGKTIKRVHWNNDEERKCLIFEFTDQTLCSFKFALAMDEEAELSEFVSGNPSKRRKLIPLPLVRQPIKPLV*
Ga0116108_11767011	3300009519	Peatland	MSKLSRADYTEYLVGKTIKRVHWNNDEKWRRLTLEFTDQTLCSFRFELAVDEEAELSDFASGNPSKPRKLIPLPL
Ga0116222_10357952	3300009521	Peatlands Soil	LAVTMSKLRRADYTEHLVGKTLKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVDEEVELSDFASDNPSKHRKLIPLPLVRQPIKPLV*
Ga0116218_12975841	3300009522	Peatlands Soil	MSRLRRADYTEPLAGKTIKRVHWNNDEKWRRLTLEFTDQTLCSFKFALAMDEEAELSEFVSGSPSKHRKLIPL
Ga0116221_11764013	3300009523	Peatlands Soil	LAVTMSKLRRADYTEHLVGKTLKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVDEEVELSDFASGDPKHRKLIPLPLVRQPIKPLDRE*
Ga0116225_11284031	3300009524	Peatlands Soil	MSKLRRADYTEHLVGKTIKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVDEEAELSDFASGDPKHRKLIPLPLVRQSIKPLDRE*
Ga0116133_11131752	3300009623	Peatland	MSKLSRADYTEYLVGKTIKRVHWNNDEKRKCLTLEFADKTLCSFRFDLTVDEEAELSDFASGNPSRHRKLIPLPLVRLPVKPLL*
Ga0116115_10896421	3300009631	Peatland	MSKLSRADYTEYLVGKTIKRVHWNNDEKRKCLTLEFADKTLCSFRFDLTVDEEAELSDFASGNPSRHRKLIPLPLVRLPVKP
Ga0116122_12287832	3300009639	Peatland	MSKLSRADYSENLAGKTIKRVHWSNHEQRKCLTLEFTDQTLCSFRFELTVDEEVELLDFASGDPAKHRKLIPLPLVRQPIKPLV*
Ga0116106_10584904	3300009645	Peatland	MSKLSRADYSENLAGKTIKRVHWSNHEQRKCLTLEFTDKTLCSFRFDLTVDEEAELSDFASSSPSERRKLIPLPLVRHPIKPLL*
Ga0116106_12500641	3300009645	Peatland	YRFPERDGYYTAGGHMAVKKTVTMSKLRRADYTEHLAGKTIKRVHWNNDEKWRRLTLEFTDQTLCSFRFELAVDEEAELSDFASGNPSKLRKLIPLPLVRQPIKPLL*
Ga0116132_11577631	3300009646	Peatland	MSLKKTAVTMSKLSRADYTEYLVGKTIKRVHWNNDEKRKCLTLEFADKTLCSFRFDLTVDEEAELSDFASGNPSKQRKLIPLPLVRQPIKPLEKD*
Ga0116217_100285898	3300009700	Peatlands Soil	MSKLCRADYSERLAGKTIKRVHWRNDEQRKCLTLEFTDRTLCSFRFDLTVDEEAELSDFASGSRSERRKLIPLPLVRLPVKPLL*
Ga0116217_102211563	3300009700	Peatlands Soil	MSKLRRADYTEHLVGKTLKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVDEEVELSDFASDNPSKHRKLIPLPLVRQPIKPLV*
Ga0116217_102917292	3300009700	Peatlands Soil	MSKLRRADYTHHLVGKTLKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVDEEVELSDFASGDPKHRKLIPLPLVRQSIKPLDRE*
Ga0116217_106120922	3300009700	Peatlands Soil	GKTLKRVHWGNHEQRKCLTLEFTDQTLCSFRFELAVDEEVELWDFASGNRPKQRKLSPLPLVRLPLKPLERE*
Ga0116219_102125931	3300009824	Peatlands Soil	MSKLRRADYTEHLVGKTIKRVHWSNDEQRKCLTLEFTDQTLCSFKFEVAVDEEAELSDFASGNPSKHRKLIPLPLVRQPIKPLL*
Ga0116223_102100671	3300009839	Peatlands Soil	ASIRQIPDFLSAVTMSKLRRADYTEHLVGKTIKRVHWSNDEQRKCLTLEFTDQTLCSFKFEVAVDEEAELSDFGSGSPSKHRKLIPLPLVRQPIKPLV*
Ga0116223_104584602	3300009839	Peatlands Soil	GKTIKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVDEEAELSDFASGNPSKHRKLIPLPLVRQPIKPLL*
Ga0116223_104991431	3300009839	Peatlands Soil	MSKLRRADYTEHLAGKTIKRVHWNNNEERKCLTFEFTDQTLCSFRFELAVDEEAELADFASGDPSKHRK
Ga0074046_104927632	3300010339	Bog Forest Soil	MSKLRRADYTEHLVGKTIKRVHWNNDEERTCLTFEFTDQTLCSFKFALAMDEEAELSEFVSGNPSKHRKLIPLPLVRQPIKPLV*
Ga0074045_101633873	3300010341	Bog Forest Soil	MSRLRRADYTEYLAGKTIKRVHWNNHEQMKCLTLEFTDLTLCSFKFELAVEEEAELSDFASGSPSKRRKLIPLPLVRQPIKPLV*
Ga0074045_106094232	3300010341	Bog Forest Soil	MSKLRRADYSENLAGKTIKRVHWCNHEQRKCLTLEFTDQTLCSFKFEVAVDEEAELSDFGSGSPSERRKLIPLPLVRLPVKPLL*
Ga0074045_106694741	3300010341	Bog Forest Soil	MSKLRRADYTEHLAGKTIKRVHWNNDERWRRLTFEFTDQTLCSFKFELEVDEEAELSDFVSGNRSKLRKLIPLPLVRQPVKPLV*
Ga0074044_1000101616	3300010343	Bog Forest Soil	LAVTVSSLRRGDYTDHLVGKTIKRVHWRNDEERKCLTLEFTDRTLCSFRFDLSVDEAVELLDFSSGEPPKQQKLIPQPLVRLPLKALERE*
Ga0074044_103816542	3300010343	Bog Forest Soil	MSKLRRADYSENLAGKTIKRVHWCNDEQRKCLTLEFTDQTLCSFKFEVAVDEEAELSDFGSGSPSERRKLIPMPLVRLPVKPLL*
Ga0074044_106875802	3300010343	Bog Forest Soil	MMSKLRRADYSENLVGKTLKRVHWRNDDKWKCLTLEFTDRTLCSFRFELGVDEEVELSDFGSGSPSKNKKLIPLPLVRQPIKPLL*
Ga0074044_109953191	3300010343	Bog Forest Soil	MSRLRRADYTEHLVGKTLKRVHWRNDEDWKCLTLEFTDQTLSSFRFELAVDEEVELTDFASGDPKHRKLIPLPLVRQPIKPLDRE*
Ga0136449_1000601753	3300010379	Peatlands Soil	MSKLRLADYTEHLAGKTLKRVHWGNHEQRKCLTLEFTDQTLCSFRFELAVDEEVELWDFASGNRPKQRKLSPLPLVRLPLKPLERE*
Ga0136449_1001082315	3300010379	Peatlands Soil	MSKLRRADYTEHLVGKTIKRVHWSNDEQRKCLTLEFTDQTLCSFKFEVAVDEEAELSDFGSGSPSKHRKLIPLPLVRQPIKPLV*
Ga0136449_1011054392	3300010379	Peatlands Soil	MSRLRRADYTEPLAGKTIKRVHWNNDEKWRRLTLEFTDQTLCSFRFELAVDEEAELADFASGDPSKHRKLIPLPLVRQPIKPLV*
Ga0136449_1022738772	3300010379	Peatlands Soil	LAVTMSKLRRADYTEHLAGKTIKRVHWNNNEERKCLTFEFTDQTLCSFKFALSMDEEAELSEFVSGNPSKHRKLIPLPLVRQPIKPLV*
Ga0137378_106308032	3300012210	Vadose Zone Soil	MSRLHRADYTQPLAGKTIKRVHWNNEEDWKCLTLEFTDQTLCSFRFELMVDEQAELSDFIDGNLSNERDIVPLPVTRKDVKPPEEE*
Ga0181533_11913022	3300014152	Bog	MSRLRRADYSEHLAGKTIKRVHWTNDEKWRRLTLEFTDRTLCSFRFDLTVDEEVELSDFASGNPSKHRKLIPLPLVRQPIKPLV*
Ga0181527_13229142	3300014153	Bog	MSKLSRADYTEYLVGKTIKRVHWNNDEKRKCLTLEFADKTLCSFRFDLTVDEEAELSDFASGNPSKHRKLIPLPLVRQPIKPLV*
Ga0181524_100196083	3300014155	Bog	MSKLRRADYTEHLAGKTLKRVHWRNDEERKCLTLEFADKTLCSFRFDLIMDEEVELSDFGSGSPSKNRKLIALPLVRQPIKPLEKE*
Ga0181530_106619472	3300014159	Bog	MSLKKTAVTMSKLSRADYTEHLVGKTIKRVHWSNDEQRKCLTLEFTDQTLCSFRFELTVDEEAELLDFASGNPAKHR
Ga0182018_100162457	3300014489	Palsa	LAVTMSKLRRADYTEHLVGKTIKRVHWNNNEQMKCLTLEFTDLTLCSFRFELAVDEEAELSDFASGNPSKRRKLIPLPLVRQPIKPLV*
Ga0182014_100238073	3300014491	Bog	MSKVSRADYTEHLVGKTIKRVHWSTDEQRKCLTLEFTDKTLCSFRFELAVGEEVELSDFASGNPPKQRKLIPLPLVRQPIKPLL*
Ga0182014_105079232	3300014491	Bog	MMSELSRADYTEPLAGKTLKRVHWRNDDNWKCLTLEFTDRTLCSFRFELGMDEEVELLDFASGNPPKQQKLIPLPL
Ga0182024_100321599	3300014501	Permafrost	MMSKLRRADYSEPLVGKTIKRVHWINDKQWRRLTLEFTDQTLCSFRFELAVDDEVELLDFASGNPPKHQKLIPLPLVRQPIKPLETE*
Ga0182024_100488064	3300014501	Permafrost	MSKLRRADYSENLAGKTIKRVHWCNDEQRKSLTLEFTDQTLCSFKFEVAVDEEAELSDFASGSPSERRKLIPLPLVRLPVKPLL*
Ga0182024_107910692	3300014501	Permafrost	MSRLRRADYTEHLAGKTIKRVHWNNHEQMKCLTLEFTDLTLCSFKFELAVDEEAELSDFASGSPSKRRKLIPLPLVRLPVKPLL*
Ga0182021_121032022	3300014502	Fen	MSKSRRADYSERLAGKTIKRVHWRNDEQRKCLTLEFADKTLCSFTFESAVDEEVELLDFASGSPPERRKLIPLPLVRLPVKPLR*
Ga0181536_100676324	3300014638	Bog	MSKLSRADYTEHLGGKTIRRAHWRNDEQRKCLTLEFTDKTLCSFRFDLTVDEEGELLDFSSSNPPKQRKLIPLPLARQPIKPLEKE*
Ga0181536_100843802	3300014638	Bog	MFPRIPICFVNAVGIIRLTMSKLRRADYTEHLAGKTIKRVHWDNDEERKCLTFEFTDQTLCSFKFELAVDEEAELSDFASGSPSKHRKLIPLPLVRQPIKPLV*
Ga0187802_102494162	3300017822	Freshwater Sediment	MSRLSRADYSEQLVGKTLKRVHWSNHEQRKCLTLEFTDKTLCSFRFDLNVDEEVELSEFASGNPSKHRKLIPLPLVRQPIKPLERE
Ga0187856_10549973	3300017925	Peatland	MSKLSRADYTEYLVGKTIKRVHWNNDEKRKCLTLEFADKTLCSFRFDLTVDEEAELSDFASGNPSRHRKLIPLPLVRLPVKPLL
Ga0187877_11042952	3300017931	Peatland	MSKLRRADYTEHLAGKTIKRVHWNNDEKWRRLTLEFTDQTLCSFRFELAVDEEAELSDFASGNPSKPRKLIPLPLVRQPIKPLL
Ga0187877_11952241	3300017931	Peatland	MSKLSRADYTEYLVGKTIKRVHWNNDEKRKCLTLEFADKTLCSFRFDLTVDEEAELSDFASGNPSKHRKLIP
Ga0187854_100398851	3300017938	Peatland	MSKLSRADYTEYLVGKTIKRVHWNNDEKRKCLTLEFADKTLCSFRFDLTVDEEAELSDFASGNPSKHRKLIPLPLVRLPIKPLL
Ga0187853_102751421	3300017940	Peatland	ENLAGKTIKRVHWSNHEQRKCLTLEFTDKTLCSFRFDLTVDEEAELSDFASSSPSERRKLIPLPLVRHPIKPLL
Ga0187879_100030963	3300017946	Peatland	MSKLSRADYSENLAGKTIKRVHWSNHEQRKCLTLEFTDKTLCSFRFDLTVDEEAELSDFASSSPSERRKLIPLPLVRHPIKPLL
Ga0187879_100373302	3300017946	Peatland	MSKLRRADYSENLVGKTLKRVHWRNDEQKKCLTLEFTDQTLCSFRFELTVDEEAELLDFASGNPAKHRKLIPLPLVRLPVKPLDSE
Ga0187817_100374724	3300017955	Freshwater Sediment	MSRLSRADYSEQLVGKTLKRVHWSNHEQRKCLTLEFTDKTLCSFRFDLNVDEEVELSEFASGNPSKHRKLIPLPLVRQSIKPLEEE
Ga0187816_102290702	3300017995	Freshwater Sediment	LRRADYTEHLVGKTLKRVHWRNDDKWKCLTLEFTDQTLCSFRFELAVDEEVELLDFASGNPPKHQKLIPLPLVRQPIKPLERE
Ga0187891_10679551	3300017996	Peatland	MSKLRRADYTHHLVGKTLKRVHWNNDDKWKCLTLEFTDQTLCSFRFELTVDEEVELLDFASGNSPKHQK
Ga0187868_11988192	3300018002	Peatland	MSKLSRADYTEYLVGKTIKRVHWNNDEKRKCLTLEFADKTLCSFRFDLTVDEEAELSDFASGNPSRHRKLIPLPLVRQPIKPLL
Ga0187804_103692362	3300018006	Freshwater Sediment	MSKLSRADYTEHLVGKTLKRVHWRNDDKWKCLTLEFTDQTLCSFRFELAVDEEVELLDFTSGNPPKHQKLIPLPLVRQPIKPLESE
Ga0187884_101295442	3300018009	Peatland	MSKLSRADYTEYLVGKTIKRVHWNNDEKRKCLTLEFADKTLCSFRFDLTVDEEAELSDFASANPSKHRKLIPLPLVRLPIKPLL
Ga0187872_100068573	3300018017	Peatland	MSKLRRADYTEHLAGKTLKRVHWRNDEERKCLTLEFADKTLCSFRFDLIMDEEVELSDFGSGSPSKNRKLIALPLVRQPIKPLEKE
Ga0187864_102796472	3300018022	Peatland	TMSKLRRADYTHHLVGKTLKRVHWNNDDKWKCLTLEFTDQTLCSFRFELTVDEEVELLDFASGNSPKHQKLIPLPLVRQPIKPLGKE
Ga0187864_102972271	3300018022	Peatland	MSKLRRADYSGHLVGKTIKRVHWRNDEDSKCLTFEFTDKTLCSFRFELVVDEEAELLDFASGSPAKHRKLIPLPLVRQPIKPLL
Ga0187889_102469231	3300018023	Peatland	MSKLSRADYSENLAGKTIKRVHWSNHEQRKCLTLEFTDKTLCSFRFDLTVDEEAELSDFASSSPSERRKLIPLP
Ga0187875_105577632	3300018035	Peatland	MSKLSRADYSENLAGKTIKRVHWSNHEQRKCLTLEFTDKTLCSFRFDLTVDEEAELSDFASSSPSERRK
Ga0187883_103713872	3300018037	Peatland	VNAVGIIRLTMSKLRRADYTEHLAGKTIKRVHWNNNEERKCLTFEFTDQTLCSFKFALAMDEEAELSEFVSGNPSKHRKLIPLPLVRQPIKPLV
Ga0187871_102897473	3300018042	Peatland	MSKLRRADYSENLAGKTIKRVHWCNHEQRKCLTLEFTDQTLCSFKFEVAVDEEAELSDFGSGSPSEHRKLIPLPLVRLPVKPLL
Ga0187871_103863881	3300018042	Peatland	MSKLRRADYTELLAGKTIKRVHWNNDEKWRRLTLEFTDQTLCSFRFELAVDEEAELSDFASGNPSKLRKLIPLPLVRQPIKPLL
Ga0187887_103211221	3300018043	Peatland	MSKLRRADYTEHLVGKTIKRVHWNNNEERKCLTFEFTDQTLCSFKFELAMDEEAELSEFVSGNPSKHRKLIPLPLVRQPIKPLV
Ga0187858_107013722	3300018057	Peatland	MSKLPRADYSESLVGKTLKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVDEEVELSDFASGNPSKHRKLIPLPLVRQPIKPLV
Ga0187769_100509765	3300018086	Tropical Peatland	MSKLSRADYTEYLVGKTIKRVHWNNDEKRKCLTLEFADKTLCSFRFDLTVDEEAELSDFASGNPSRHRKLIPLPLVRLPIKPLL
Ga0187852_10827582	3300019082	Peatland	MSKLRRADYTHHLVGKTLKRVHWNNDDKWKCLTLEFTDQTLCSFRFELTVDEEVELLDFASGNSPKHQKLIPLPLVRQPIKPLGKE
Ga0210385_101661332	3300021402	Soil	MSRLRRADYTEPLAGKTIKRVHWNNHEQMKCLTLEFTDLTLCSFKFELAVDEEAELSDFASGSPSKRRKLIPLPLVRQPIKPLV
Ga0224557_11015692	3300023101	Soil	MSKLRRADYSEHLVGKTLKRVHWCNDEQRKCLTLEFTDQTLCSFRFELAVDEEVELLDFASGNPPKQQKLIPQPLVRQPIKALERE
Ga0224544_10513422	3300023250	Soil	MSKLRRADYTEHLVGKTIKRVHWNNNEQMKCLTLEFTDLTLCSFRFELAVDEEAELSDFASGNPSKRRKLIPLPLVRQPIKPLV
Ga0209890_100077612	3300026291	Soil	MSKLRRADYSENLAGKTIKRVHWCNHEQRKCLTLEFTDQTLCSFKFEVAVDEEAELSDFGSGSPSERRKLIPLPLVRLPVKPLL
Ga0209839_101722481	3300026294	Soil	MSKLRRADYSENLAGKTIKRVHWCNHEQRKCLTLEFTDQTLCSFKFEVAVDEEAELWDFGSGSPSKRRKLIPLPLVRLPVKPLL
Ga0208324_10847661	3300027604	Peatlands Soil	MSKLRRADYTEHLVGKTLKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVDEEVELSDFASDNPSKHRKLIPLPLVRQPIKPLV
Ga0209422_10116185	3300027629	Forest Soil	VTMSKLRRADYTEHLAGKTIKRVHWNNDEERKCLTFEFTDQTLCSFKFALAMDEEAELSEFVSGNPSTHRKLIALPLVRQPIKPLV
Ga0209422_10125756	3300027629	Forest Soil	MSKLRRADYTEHLVGKTVKRVHWSNDEQRKCLTLEFTDQTLCSFKFALAMDEEAELSDFASVNPSKHRKLIPLPLVRQPIKPLV
Ga0209656_104343342	3300027812	Bog Forest Soil	MSRLRRADYTEHLAGKTIKRVHWNNHEQMKCLTLEFTDLTLCSFKFELAVDEEAELSDFASGSPSKRRKLIPLPL
Ga0209040_100701342	3300027824	Bog Forest Soil	MSRLRRADYTEHLAGKTIKRVHWNNHEQMKCLTLEFTDLTLCSFKFELAVDEEAELSDFASGSPSKRRKLIPLPLVRQPIKPLV
Ga0209039_100578532	3300027825	Bog Forest Soil	MSKLKRADYSENLAGKTIKRVHWCNDEQRKCLTFEFTDKTLCAFMFELAVDEGVELSNFASGNPPKHQKQSP
Ga0209274_100495975	3300027853	Soil	MSKLRRADYTEHLAGKTIKRVHWNNDEERKCLTFEFTDQTLCSFKFELAMEEEAELLEFVSDNPSKHRKLIPLPLVRQPIKPLL
Ga0209517_1001315111	3300027854	Peatlands Soil	VTMSKLRRADYTEHLVGKTIKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVDEEAELSDFASGNPSKHRKLIPLPLVRQPIKPLL
Ga0209517_100155787	3300027854	Peatlands Soil	MSKLCRADYSERLAGKTIKRVHWRNDEQRKCLTLEFTDRTLCSFRFDLTVDEEAELSDFASGSRSERRKLIPLPLVRLPVKPLL
Ga0209517_100266833	3300027854	Peatlands Soil	MSKLRRADYTHHLVGKTLKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVDEEVELSDFASGDPKHRKLIPLPLVRQSIKPLDRE
Ga0209415_101189932	3300027905	Peatlands Soil	MSKLRLADYTEHLAGKTLKRVHWGNHEQRKCLTLEFTDQTLCSFRFELAVDEEVELWDFASGNRPKQRKLSPLPLVRLPLKPLERE
Ga0316363_101456061	3300030659	Peatlands Soil	GKTLKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVDEEVELSDFASDNPSKHRKLIPLPLVRQPIKPLV
Ga0310038_103577691	3300030707	Peatlands Soil	GKTLKRVHWGNHEQRKCLTLEFTDQTLCSFRFELAVDEEVELWDFASGNRPKQRKLSPLPLVRLPLKPLERE
Ga0302140_102797492	3300031261	Bog	MSKLRRADYTEHLVGKTLKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVGEEVELSEFVSGNPSKHRKLIPLPLVRQPIKPLV
Ga0310686_1068091031	3300031708	Soil	MSKLGRADYTEHLAGKTIKRVHWNNDERWRRLTFEFTDQTLCSFKFELAVDEEAELSDFVSGNPSKLRKLIPLPLVRQPIKPLV
Ga0310686_1167655032	3300031708	Soil	MSKLHRADYTEHLAGKTIKRVHWNNDEKWRRLTLEFTDQTLCSFRFELAVDEEAELSDFASGNPSKHRKLIPLPLVRHPIKPLV
Ga0311301_106779292	3300032160	Peatlands Soil	MSRLRRADYTEPLAGKTIKRVHWNNDEKWRRLTLEFTDQTLCSFRFELAVDEEAELADFASGDPSKHRKLIPLPLVRQPIKPLV
Ga0335081_109220041	3300032892	Soil	LRRADYTEHLVGKTLKRVHWRNDEEWKCLTLEFTDQTLCSFRFELAVGEEVELLDFASGNSPKHQKLIPLPLVRQPIKPLEKE
Ga0326727_107349411	3300033405	Peat Soil	MSKLRRADYTEHLVGKTIKRVHWCNDEQRKCLTLEFADQTLCSFRFELAVDEEVELLDFASGNPPKQQKLIPLPLVRQLIKPLERE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087856

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences