Metagenome Family F087825

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087825
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	88 residues
Representative Sequence	MPSEATRRAPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHVSIDPEIESIL
Number of Associated Samples	79
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.64 %
% of genes near scaffold ends (potentially truncated)	20.00 %
% of genes from short scaffolds (< 2000 bps)	68.18 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.455 % of family members)
Environment Ontology (ENVO)	Unclassified (35.455 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.00% β-sheet: 13.33% Coil/Unstructured: 56.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00578	AhpC-TSA	35.45
PF13899	Thioredoxin_7	23.64
PF01979	Amidohydro_1	6.36
PF12728	HTH_17	2.73
PF10415	FumaraseC_C	1.82
PF01734	Patatin	1.82
PF01566	Nramp	1.82
PF13365	Trypsin_2	1.82
PF00106	adh_short	0.91
PF04365	BrnT_toxin	0.91
PF03713	DUF305	0.91
PF01887	SAM_HAT_N	0.91
PF00753	Lactamase_B	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	1.82
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	1.82
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	1.82
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	1.82
COG1912	Stereoselective (R,S)-S-adenosylmethionine hydrolase (adenosine-forming)	Defense mechanisms [V]	0.91
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.91
COG3544	Uncharacterized conserved protein, DUF305 family	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	48.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	20.91 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.91 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	20.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %
Unclassified	root	N/A	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104295417	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300004268\|Ga0066398_10087565	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300004479\|Ga0062595_100090870	All Organisms → cellular organisms → Bacteria → Acidobacteria	1584	Open in IMG/M
3300005167\|Ga0066672_10820790	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300005175\|Ga0066673_10052180	All Organisms → cellular organisms → Bacteria	2067	Open in IMG/M
3300005179\|Ga0066684_10910745	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005332\|Ga0066388_100000356	All Organisms → cellular organisms → Bacteria	20875	Open in IMG/M
3300005332\|Ga0066388_100420329	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300005332\|Ga0066388_101324732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300005332\|Ga0066388_101398720	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300005332\|Ga0066388_108735781	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005434\|Ga0070709_10010710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5087	Open in IMG/M
3300005436\|Ga0070713_101296584	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005533\|Ga0070734_10000767	All Organisms → cellular organisms → Bacteria	58191	Open in IMG/M
3300005537\|Ga0070730_10005016	All Organisms → cellular organisms → Bacteria	11487	Open in IMG/M
3300005537\|Ga0070730_10055970	All Organisms → cellular organisms → Bacteria	2827	Open in IMG/M
3300005537\|Ga0070730_10081510	All Organisms → cellular organisms → Bacteria	2265	Open in IMG/M
3300005537\|Ga0070730_10100970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1997	Open in IMG/M
3300005557\|Ga0066704_10096799	All Organisms → cellular organisms → Bacteria → Acidobacteria	1933	Open in IMG/M
3300005559\|Ga0066700_10259956	All Organisms → cellular organisms → Bacteria → Acidobacteria	1216	Open in IMG/M
3300005561\|Ga0066699_10141209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1634	Open in IMG/M
3300005764\|Ga0066903_101644387	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300006163\|Ga0070715_10161613	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107	Open in IMG/M
3300006163\|Ga0070715_10878857	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300006173\|Ga0070716_100063072	All Organisms → cellular organisms → Bacteria	2150	Open in IMG/M
3300006173\|Ga0070716_100812500	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300006854\|Ga0075425_101276135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300006904\|Ga0075424_100627147	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300006914\|Ga0075436_100991862	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300007255\|Ga0099791_10469295	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300009137\|Ga0066709_100494101	All Organisms → cellular organisms → Bacteria → Acidobacteria	1722	Open in IMG/M
3300009137\|Ga0066709_103388478	Not Available	579	Open in IMG/M
3300009792\|Ga0126374_10128247	All Organisms → cellular organisms → Bacteria → Acidobacteria	1497	Open in IMG/M
3300010043\|Ga0126380_10051736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2223	Open in IMG/M
3300010043\|Ga0126380_10165851	All Organisms → cellular organisms → Bacteria → Acidobacteria	1436	Open in IMG/M
3300010043\|Ga0126380_10497273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300010043\|Ga0126380_10654507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300010043\|Ga0126380_10819674	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300010359\|Ga0126376_10000036	All Organisms → cellular organisms → Bacteria	54438	Open in IMG/M
3300010359\|Ga0126376_10000449	All Organisms → cellular organisms → Bacteria	19902	Open in IMG/M
3300010359\|Ga0126376_11616380	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300010360\|Ga0126372_11125807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300010362\|Ga0126377_10973135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300010362\|Ga0126377_11203621	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300010366\|Ga0126379_12722527	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300010398\|Ga0126383_10774328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1041	Open in IMG/M
3300011269\|Ga0137392_10104189	All Organisms → cellular organisms → Bacteria → Acidobacteria	2240	Open in IMG/M
3300012200\|Ga0137382_10765346	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300012202\|Ga0137363_10899226	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300012205\|Ga0137362_10069101	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2921	Open in IMG/M
3300012205\|Ga0137362_11352871	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300012211\|Ga0137377_10534805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1110	Open in IMG/M
3300012361\|Ga0137360_10660342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300012683\|Ga0137398_10066542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2185	Open in IMG/M
3300012683\|Ga0137398_10076438	All Organisms → cellular organisms → Bacteria	2054	Open in IMG/M
3300012917\|Ga0137395_10177543	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1472	Open in IMG/M
3300012924\|Ga0137413_10278332	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300012924\|Ga0137413_11322327	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012925\|Ga0137419_10069003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2348	Open in IMG/M
3300012925\|Ga0137419_10550697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300012927\|Ga0137416_10600618	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300012927\|Ga0137416_12107808	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300012930\|Ga0137407_10523632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300012930\|Ga0137407_11037266	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300012944\|Ga0137410_10032822	All Organisms → cellular organisms → Bacteria	3639	Open in IMG/M
3300012971\|Ga0126369_10727510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1071	Open in IMG/M
3300012986\|Ga0164304_10712917	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300014166\|Ga0134079_10019437	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300015052\|Ga0137411_1262408	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1304	Open in IMG/M
3300015241\|Ga0137418_11001638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300015242\|Ga0137412_10005722	All Organisms → cellular organisms → Bacteria → Acidobacteria	9959	Open in IMG/M
3300016404\|Ga0182037_10312573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1267	Open in IMG/M
3300018482\|Ga0066669_10238717	All Organisms → cellular organisms → Bacteria → Acidobacteria	1427	Open in IMG/M
3300019789\|Ga0137408_1290178	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1908	Open in IMG/M
3300020199\|Ga0179592_10359896	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300021168\|Ga0210406_10000561	All Organisms → cellular organisms → Bacteria	50132	Open in IMG/M
3300021170\|Ga0210400_10000083	All Organisms → cellular organisms → Bacteria	127381	Open in IMG/M
3300021478\|Ga0210402_10008639	All Organisms → cellular organisms → Bacteria → Acidobacteria	8870	Open in IMG/M
3300021560\|Ga0126371_12785940	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300024178\|Ga0247694_1000012	All Organisms → cellular organisms → Bacteria	118720	Open in IMG/M
3300024178\|Ga0247694_1030921	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300024182\|Ga0247669_1000135	All Organisms → cellular organisms → Bacteria	39156	Open in IMG/M
3300024182\|Ga0247669_1016140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1315	Open in IMG/M
3300024246\|Ga0247680_1001752	All Organisms → cellular organisms → Bacteria → Proteobacteria	4074	Open in IMG/M
3300024331\|Ga0247668_1011102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1877	Open in IMG/M
3300025939\|Ga0207665_11246062	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300026301\|Ga0209238_1008732	All Organisms → cellular organisms → Bacteria → Proteobacteria	4000	Open in IMG/M
3300026310\|Ga0209239_1115346	All Organisms → cellular organisms → Bacteria → Acidobacteria	1121	Open in IMG/M
3300026319\|Ga0209647_1025176	All Organisms → cellular organisms → Bacteria → Acidobacteria	3592	Open in IMG/M
3300026374\|Ga0257146_1016308	All Organisms → cellular organisms → Bacteria → Acidobacteria	1211	Open in IMG/M
3300026555\|Ga0179593_1163030	All Organisms → cellular organisms → Bacteria	2799	Open in IMG/M
3300026557\|Ga0179587_10070798	All Organisms → cellular organisms → Bacteria → Acidobacteria	2052	Open in IMG/M
3300027527\|Ga0209684_1039096	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300027826\|Ga0209060_10003378	All Organisms → cellular organisms → Bacteria	13453	Open in IMG/M
3300027857\|Ga0209166_10000348	All Organisms → cellular organisms → Bacteria	54720	Open in IMG/M
3300027857\|Ga0209166_10083743	All Organisms → cellular organisms → Bacteria → Acidobacteria	1798	Open in IMG/M
3300027857\|Ga0209166_10418934	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300028146\|Ga0247682_1021429	All Organisms → cellular organisms → Bacteria → Acidobacteria	1135	Open in IMG/M
3300028146\|Ga0247682_1059304	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300028536\|Ga0137415_10275084	All Organisms → cellular organisms → Bacteria → Acidobacteria	1490	Open in IMG/M
3300031720\|Ga0307469_11246622	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300031720\|Ga0307469_11538520	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300032180\|Ga0307471_100045476	All Organisms → cellular organisms → Bacteria	3566	Open in IMG/M
3300032180\|Ga0307471_100622435	All Organisms → cellular organisms → Bacteria → Acidobacteria	1240	Open in IMG/M
3300032261\|Ga0306920_103735059	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300032770\|Ga0335085_10211572	All Organisms → cellular organisms → Bacteria → Acidobacteria	2365	Open in IMG/M
3300032782\|Ga0335082_10059670	All Organisms → cellular organisms → Bacteria	3902	Open in IMG/M
3300032782\|Ga0335082_10197412	All Organisms → cellular organisms → Bacteria → Acidobacteria	1913	Open in IMG/M
3300033004\|Ga0335084_10169261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2271	Open in IMG/M
3300033158\|Ga0335077_11166286	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.27%
Host-Associated	Host-Associated	2.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.27%
Plants	Host-Associated → Plants	2.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.18%
Loam	Environmental → Terrestrial → Soil → Loam	14.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.91%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1042954172	3300000364	Soil	MTAEATRRAPFMSLQELTDRYRKLVHAFGDPVAISKFGFSVEEAERLFSSFEEDYHIGRFFHFTEESGVQPHSINGFPATHLAIDPEIESIL*FLALFAASLRLPLVQERKHVLR
Ga0066398_100875652	3300004268	Tropical Forest Soil	MSLKELTDLYRKLVHAFGDPIPISKFGFSIEEAERLFSGFDEDYHISRFFHFTEEPNAQRYSIDGFPATHVAIDPEIESIL*
Ga0062595_1000908702	3300004479	Soil	MPSEATRRAPSMSLKGLTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFEEDYHIGRFFHFTEQHAAQRYSVNGFPATHVSIDPEIESIL*
Ga0066672_108207901	3300005167	Soil	MPSEATRRAPFMPLKELADLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPPAQRHSVNGFPATHVSIDPEIESI
Ga0066673_100521802	3300005175	Soil	MPSEATRRAPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAARRHSINGFPATHVSIDPEIESIL*
Ga0066684_109107452	3300005179	Soil	MPSEATRRAPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEAGGRKFSINGFSATYVSIDAEIETIL*
Ga0066388_1000003564	3300005332	Tropical Forest Soil	MTSGAARRAPFMSLKELTDIYRKLVHAFGDPIPISKFGFSKEEAERLFSGFDEDYHISRFFHFTEESGAQRYSIDGFPATHIAIDPEIESIL*
Ga0066388_1004203293	3300005332	Tropical Forest Soil	MTSGAARRAPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTVESNAQLYSIDGFPATHVSIDPEIESIL*
Ga0066388_1013247322	3300005332	Tropical Forest Soil	MSLKELADSYRKLVHAFGDPVAISKFGFSTEQTERLFSGFEEDYHIGRFFHFTEESGCQSYSINGFPATHVAIDPEIESVL*
Ga0066388_1013987202	3300005332	Tropical Forest Soil	MSAEGHRPAPFLSLQELVRLYRKLAPSFGAAIPISLFGFSIEEAERLFSGFDEDYHISRFFHFTEQPAAQRYSIDGFPATHIAIDPEIESIL*
Ga0066388_1087357811	3300005332	Tropical Forest Soil	MASEAHRRAPFMSLKELTDLYRKLATNFGDPVLISQFGFSIEEAERLFSGYDEDYHISRFFHFTEQSGAQRYSIDGFPATHVSIDPEIQSIL*
Ga0070709_100107105	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPSEATGLTPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEEPSAQSHSIDGFPATHVAIDPEIESIL*
Ga0070713_1012965842	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPSEATGLTPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEEPSAQRHSIDGFPATHVAIDPEIESIL*
Ga0070734_1000076723	3300005533	Surface Soil	MSSEATRRAPFMSLKELTDLYRKLVNAFGDPIAISKFGFTVEEAERLFSGFDEDYHISRFFHFTEEPAAQRYSIDGFPATHVAIDPEIESIL*
Ga0070730_100050167	3300005537	Surface Soil	MSAEAARRVPFMSLKELTDLYRKLTHAFGDPIPISKFGFSVEEAERLFSGFEEDYHIGRFFHFTVEPAAQLHSINGFPATHVSIDPEIESIL*
Ga0070730_100559704	3300005537	Surface Soil	MSLKELTDLYRKLVHAFGDPIPISKFGFSIEEAERLFSTFDEDYHISRFFHFTEESNAQHYSIDGFPATHVSIDPEIESIL*
Ga0070730_100815103	3300005537	Surface Soil	MPSEATRRAPFMSLKELTDLYRKLVNAFGDPIPISKFGFAVEEAERLFSGFDEDYHISRFFHFTEEPAAQRYSIDGFPATHVAIDPEIESIL*
Ga0070730_101009702	3300005537	Surface Soil	MPSEATRLTPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEEPSAQSHSIDGFPATHVAIDPEIESIL*
Ga0066704_100967991	3300005557	Soil	MPSEATRRTPFMSLKELADLYRKLVHAFGDPIPISKFGFSVEDAERLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHVSIDPEIESIL*
Ga0066700_102599561	3300005559	Soil	PSEATRRTPFMSLKELADLYRKLVHAFGDPIPISKFGFSVEDAERLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHVSIDPEIESIL*
Ga0066699_101412091	3300005561	Soil	MPSEATRRAPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHVSIDPEIESIL*
Ga0066903_1016443871	3300005764	Tropical Forest Soil	MTSEAPRRAPFLSLHELIDRYRNLVHAFGDPVALSNFGFSIEEADRLFSAFDEDYHISRFFTFTQESGAQSHSVNGFPATHVAISPEIQSIL*
Ga0070715_101616131	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VTSQAARRVPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSAFDEDYHISRFFHFTEESGAQRYSIDGFPATHVAIDPEIESIL*
Ga0070715_108788571	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPSEATGLTPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEEPSAQRHSINGFPATHVAIDPEIESIL*
Ga0070716_1000630724	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPSEATRRAPFMSLKELTDRYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEEPSAQRHSIDGFPATHVAIDPEIESIL*
Ga0070716_1008125001	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPSEATRRVPLMSLKELADHYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEEPSAQRHSINGFPATHVAIDPEIESIL*
Ga0075425_1012761352	3300006854	Populus Rhizosphere	MPSEATRRTPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSAFDEDYHISRFFHFTEEPEGQRHSIDGFPATHVAIDPEIESIL*
Ga0075424_1006271472	3300006904	Populus Rhizosphere	MPSEATRRTPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSAFDEDYHISRFFHLRNEHGDKYSINGEMATHVVIDPAIRLVL*
Ga0075436_1009918622	3300006914	Populus Rhizosphere	MPSEATRRTPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSAFDEDYHISRFFHFTEEPEGQRHSIDGFPATHVAIDPEIESI
Ga0099791_104692952	3300007255	Vadose Zone Soil	MTAEAPRRAPFMSLQELTDRYRKLVHAFGDPVAISKFGFSVEEAERLFSSFEEDYHIGRFFHFTEESGVQPHSINGFPATHVAIDPEIESIL*
Ga0066709_1004941013	3300009137	Grasslands Soil	MSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAARRHSINGFPATHVSIDPEIESIL*
Ga0066709_1033884781	3300009137	Grasslands Soil	MSLKELTDLYRKLVHASGDPIPISKFGFSVAEAERLFSGLAEDYRTSPFFHFTEQPATQPHSINGFPATHVSFDPAIESIL*
Ga0126374_101282472	3300009792	Tropical Forest Soil	MSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAEHLFSGFDEDYHISRFFHFTEESNAQRYSIDGFPATHVSIDPEIESIL*
Ga0126380_100517362	3300010043	Tropical Forest Soil	MSLKELTDLYCKLVHAFGDPIPISKFGFSIEEAERLFSGFDEDYHISRFFNFTEEPNAQRYSIDGFPATHVAIDPEIEAIL*
Ga0126380_101658511	3300010043	Tropical Forest Soil	MSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAEHLFSGFDEDYHISRFFHFTEESNAQRYSIEGFPATHVSIDPEIESIL*
Ga0126380_104972732	3300010043	Tropical Forest Soil	MSLKELTELYRHLVHAFGDPIPISKFGFSVEEAERLFSGLDEDYHISRFFKFTEESAGQRYSIDGFPATHVAIDPEIESIL*
Ga0126380_106545072	3300010043	Tropical Forest Soil	MSLKELTDIYRKLVHAFGDPIPISKFGFSREEAERLFSGYDEDYHISRFFHFTEESEGQRYSIDGFPATHVAIDPEIESIL*
Ga0126380_108196741	3300010043	Tropical Forest Soil	VHAFGDPVAISKFGFSVEEAERLFSSFEEDYHIGRFFHFTEETGAQPHSINGFPATHVAIDPEIESVL*
Ga0126376_1000003618	3300010359	Tropical Forest Soil	MSLKELTDIYRKLVHAFGDPIPISKFGFSKEEAERLFSGFDEDYHISRFFHFTEESGAQRYSIDGFPATHIAIDPEIESIL*
Ga0126376_100004492	3300010359	Tropical Forest Soil	MSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEESNAQRYSIDGFPATHVSIDPEIESIL*
Ga0126376_116163802	3300010359	Tropical Forest Soil	LVMPAEFHRRAPFLSLKELVDLYRKLAPKFGDPIPISQFGFSVEEAERLFSGFDEDYHISRFFHFTEESEGQRYSIDGFPATHVSIDPEIESIL*
Ga0126372_111258071	3300010360	Tropical Forest Soil	TDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEESNAQLYSIDGFPATHVSIDPEIESIL*
Ga0126377_109731351	3300010362	Tropical Forest Soil	MSLKELTDIYRKLVHAFGDPIPISKFGFSREEAERLFSGYDEDYHINRFFHFTEESEGQRCSIDGFPAKHVAIDPEIESIL*
Ga0126377_112036212	3300010362	Tropical Forest Soil	MTPETARRAHHMSLKELTDLYRKLVHAFGDPIPISKFGFSVDETERFFSGFDEDYHISRFFHFTEESATQRYSINGFPATHVSIDPEIESIL*
Ga0126379_127225271	3300010366	Tropical Forest Soil	MSLKELTDLYRKLVHAFGDPIPISKFGFSIEEAERLFSGFDEDYHISRFFHFTEEPAAQRYSIDGFPATHVSIDPEIESIL*
Ga0126383_107743282	3300010398	Tropical Forest Soil	MTAEATRRATFMSLKELTELYRKLVHAFGDPIPLSKFGFSVEETERLFSGFDEDYHISRFFHFTEESAPQRYFINGFPATHVSIDPEIESIL*
Ga0137392_101041895	3300011269	Vadose Zone Soil	MSLKELTDTYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHVSIDPEIESIL*
Ga0137382_107653461	3300012200	Vadose Zone Soil	TRRVPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHVSIDPEIESIL*
Ga0137363_108992262	3300012202	Vadose Zone Soil	MSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHVSIDPEIESIL*
Ga0137362_100691013	3300012205	Vadose Zone Soil	MISEATRRVPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQSGAQRYSIDGFPATHVAIDPEIESIL*
Ga0137362_113528713	3300012205	Vadose Zone Soil	MSLKELADLYRKLVHAFGDPIPISKFGFSVEEAECLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHV
Ga0137377_105348052	3300012211	Vadose Zone Soil	MPFEATRRAPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQSAAQRHSIDGFPATHVSIDPEIESIL*
Ga0137360_106603421	3300012361	Vadose Zone Soil	MSLKELTNLYRNLVHASGDPVPISKFGFSVQEAERLFSGFEEDYHIGRFFHFTEQPAAQGHSINGFPATHVSIDPEIESIL*
Ga0137398_100665426	3300012683	Vadose Zone Soil	MPSEATRRAPFMSLKELADLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQTAAQRHSINGFPATHVSIDPEIESIL*
Ga0137398_100764384	3300012683	Vadose Zone Soil	MPFEATRRAPFMSLTELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHVSIDPEIESIL*
Ga0137395_101775431	3300012917	Vadose Zone Soil	MSLKELADLYRKLVHAFGDPIPIAKFGFSVEEAERLFSGFDEDYHISRFFHFAEQPGAQRHSINGFPATHVSIDPEIESIL*
Ga0137413_102783322	3300012924	Vadose Zone Soil	MPFEATRRAPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHVSIDPEIESIL*
Ga0137413_113223271	3300012924	Vadose Zone Soil	SSRGASMPSEATRRAPFMSLKELADLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQTAAQRHSINGFPATHVSIDPEIESIL*
Ga0137419_100690032	3300012925	Vadose Zone Soil	MPSEATRRAPFMSLKELTDLYRKLVQAFGDPIPIAKFGFSVEEAERLFSGFDEDYHISRFFHFTEEPAAQRYSINGFPATHLSIDAEVESIL*
Ga0137419_105506972	3300012925	Vadose Zone Soil	MPFEATRRAPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAQRHSVNGFPATHVSIDPEIESIL*
Ga0137416_106006183	3300012927	Vadose Zone Soil	MPSEATRRAPFMSLKELADLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAQRHSVNGFPATHVSIDPEIESIL*
Ga0137416_121078081	3300012927	Vadose Zone Soil	TAEATRRAPFMSLQELTDRYRKLVHAFGDPVAISKFGFSVEQAERLFSGFEEDYHIGRFFHFTEEPGGEPYSINGFPATRVAIDPEIETIL*
Ga0137407_105236321	3300012930	Vadose Zone Soil	MSLKELADLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHVSIDPEIESIL*
Ga0137407_110372662	3300012930	Vadose Zone Soil	MPFEATRRAPFMSLKELTDLYRKLVHTFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHVSIDPEIESIL*
Ga0137410_100328225	3300012944	Vadose Zone Soil	MTSEATGRAPFMSLQELVQRYRGLVHAFGDPVAISRFGFSVEEADRLFSGFDEDYHISRFFNFTEESGAQPHSINGFPATHVAIDPEIESIL*
Ga0126369_107275101	3300012971	Tropical Forest Soil	HAFGDPVALSNFGFSIEEADRLFSAFDEDYHISRFFTFTQESGAQSHSVNGFPATHVAISPEIQSIL*
Ga0164304_107129171	3300012986	Soil	MSLKGLTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFEEDYHIGRFFHFTEQHAAQRYSVNGFPATHVSIDPEIESIL*
Ga0134079_100194373	3300014166	Grasslands Soil	MPSEATRRAPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAKRHSINGFPATHVSIDPEIESIL*
Ga0137411_12624081	3300015052	Vadose Zone Soil	MTAEAARRAPFMSLQELTDRYRKLVHAFGDPVAISKFGFSVEEAERLFSSFEEDYHIGRFFHFTEESGVQPHSINGFPATHVAIDPEIESIL*
Ga0137418_110016383	3300015241	Vadose Zone Soil	RKLVHAFGDPVAISKFGFSVEQAERLFSGFEEDYHIGRFFHFTEEPGGEPYSINGFPATRVAIDPEIETIL*
Ga0137412_100057229	3300015242	Vadose Zone Soil	MSLKELADLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQTAAQRHSINGFPATHVSIDPEIESIL*
Ga0182037_103125733	3300016404	Soil	MTAEATRRAPFMSLKELTDLYSKLVHAFGDPIPISKFGFSIEEAERLFSAFDEDYHISRFFQFTEESGAQRYSINGFPATHVSIDPEIESIL
Ga0066669_102387172	3300018482	Grasslands Soil	MPSEATRRAPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAARRHSINGFPATHVSIDPEIESIL
Ga0137408_12901781	3300019789	Vadose Zone Soil	MISEATRRVPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQSGAQRYSIDGFPATHVAIDPEIESIL
Ga0179592_103598961	3300020199	Vadose Zone Soil	YRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHVSIDPEIESIL
Ga0210406_1000056147	3300021168	Soil	MTAEATRRAPFMSLQELTDRYRKLVHAFGDPVAISKFGFSVEEAERLFSSFEEDYHIGRFFLFTEESGVQPHSINGFPATHVAIDPEIESIL
Ga0210400_10000083102	3300021170	Soil	MTSEATGRAPFMSLLELVERYRKLVHAFGDPVAISNFGFSVEEANRLFSGFDEDYHISRFFNFTEESGAQRHSINSFPATHVAIDPEIESIL
Ga0210402_1000863910	3300021478	Soil	MTSEATRRAPFMSLQELTDRYRKLVHAFGDPVAISKFGFSVEEAERLFSGFEEDYHIGRFFHFTEVSGAQPHSINGFPATHVALDPEIESIL
Ga0126371_127859401	3300021560	Tropical Forest Soil	MTITTGAVRRAPFMSLKQLVGLYCNLVHAFGDPIPISKFGFSVEETESLFSSFDEDYHISRFFKFTEQSGAQRYSIDGFPATHVAIDPEIESIL
Ga0247694_100001252	3300024178	Soil	MPSEGTRRAPSMSLKGLTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFEEDYHIGRFFHFTEQPAAQRYSVNGFPATHVSIDPEIESIL
Ga0247694_10309212	3300024178	Soil	MPSEATRLTPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEEPSAQSHSIDGFPATHVAIDPEIESIL
Ga0247669_100013514	3300024182	Soil	MSLKGLTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFEEDYHIGRFFHFTEQHAAQRYSVNGFPATHVSIDPEIESIL
Ga0247669_10161403	3300024182	Soil	MTSQAARRVPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGLDEDYHISRYFHFTEESEGQRHSIDGFPATHVAIDPEIESIL
Ga0247680_10017524	3300024246	Soil	MSLKGLTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFEEDYHIGRFFHFTEQPAAQRYSVNGFPATHVSIDPEIESIL
Ga0247668_10111021	3300024331	Soil	RLTPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGLDEDYHISRYFHFTEESEGQRHSIDGFPATHVAIDPEIESIL
Ga0207665_112460622	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPSEATRRAPLMSLKELTDRYRKLVHAFGDPTPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEEPSAQRHSINGFPATHVAIDPEIESIL
Ga0209238_10087327	3300026301	Grasslands Soil	MPSEATRRAPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHVSIDPEIESIL
Ga0209239_11153461	3300026310	Grasslands Soil	FMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHVSIDPEIESIL
Ga0209647_10251763	3300026319	Grasslands Soil	MASEAPRRAPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSAFDEDYHISRFFHFTEQPAAQRHSVNGFPATHVSIDPEIESIL
Ga0257146_10163083	3300026374	Soil	MTAEATRRAPFMSLQELTDRYRKLVHAFGDPVAISKFGFSVEEAERLFSSFEEDYHIGRFFHFTEESGVQPHSINGFPATHVAIDPEIESIL
Ga0179593_11630304	3300026555	Vadose Zone Soil	MTAEAPRRAPFMSLQELTDRYRKLVHAFGDPVAISKFGFSVEEAERLFSSFEEDYHIGRFFHFTEESGVQPHSINGFPGTHVAIDPEIESIL
Ga0179587_100707983	3300026557	Vadose Zone Soil	MPSEATRRAPFMSLKELADLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQTAAQRHSINGFPATHVSIDPEIESIL
Ga0209684_10390962	3300027527	Tropical Forest Soil	MTSGAARRAPFMSLKELTDIYRKLVHAFGDPIPISKFGFSKEEAERLFSGFDEDYHISRFFHFTEESGAQRYSIDGFPATHIAIDPEIESIL
Ga0209060_100033783	3300027826	Surface Soil	MSSEATRRAPFMSLKELTDLYRKLVNAFGDPIAISKFGFTVEEAERLFSGFDEDYHISRFFHFTEEPAAQRYSIDGFPATHVAIDPEIESIL
Ga0209166_1000034825	3300027857	Surface Soil	MSAEAARRVPFMSLKELTDLYRKLTHAFGDPIPISKFGFSVEEAERLFSGFEEDYHIGRFFHFTVEPAAQLHSINGFPATHVSIDPEIESIL
Ga0209166_100837432	3300027857	Surface Soil	MSLKELTDLYRKLVHAFGDPIPISKFGFSIEEAERLFSTFDEDYHISRFFHFTEESNAQHYSIDGFPATHVSIDPEIESIL
Ga0209166_104189342	3300027857	Surface Soil	RKLVNAFGDPIPISKFGFAVEEAERLFSGFDEDYHISRFFHFTEEPAAQRYSIDGFPATHVAIDPEIESIL
Ga0247682_10214293	3300028146	Soil	EATRRVPLMSLKELADRYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEEPSAQRHSINGFPATHVAIDPEIESIL
Ga0247682_10593041	3300028146	Soil	PFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSGLDEDYHISRYFHFTEESEGQRHSIDGFPATHVAIDPEIESIL
Ga0137415_102750842	3300028536	Vadose Zone Soil	MSLKELADLYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEQPAAQRHSINGFPATHVSIDPEIESIL
Ga0307469_112466221	3300031720	Hardwood Forest Soil	MVSEAARRAPFMSLKELADAYRKLVHAFGDPVAISKFGFSIEKAERLFSSFEEDYHISRFFHFTEESGAQPYSINGFPATHVAIDPEIESIL
Ga0307469_115385201	3300031720	Hardwood Forest Soil	MPSEATRRTPFMSLKELTDLYRKLVHAFGDPIPISKFGFSVEEAERLFSAFDEDYHISRFFHFTEEPEGQRHSIDGFPATHVAIDPEIESIL
Ga0307471_1000454763	3300032180	Hardwood Forest Soil	MTSQAARRVPFMSLKELTDVYRKLVHAFGDPIPISKFGFSEEEAERLFSAFDEDYHISRFFHFTEESGAQRYSIDGFPATHVAIDPEIESIL
Ga0307471_1006224353	3300032180	Hardwood Forest Soil	MPSEATRRVPLMSLKELTDRYRKLVHAFGDPIPISKFGFSVEEAERLFSGFDEDYHISRFFHFTEEPSAQRHSINGFPATHVAIDPEIESIL
Ga0306920_1037350591	3300032261	Soil	MTAEATRRAPFMSLKELTDLYSKLVHAFGDPIPISKFGFSIEEAERLFSAFDEDYHISRFFQFTEESGAQRYSINGFPATHVSIDPEI
Ga0335085_102115724	3300032770	Soil	MTSEAQRRAPFFTLQELVERYRGLVHAFGDPVAISRFGFSIEEADHLFSGLDEDYHISRFFNFTDESGAQRHSINGFPATHVAIV
Ga0335082_100596701	3300032782	Soil	MTSEAQRRAPFLTLQELVERYRGLVHAFGDPVAISRFGFSSEEADHLFSGLDEDYHISRFFNFTEESGAQRHSINGFPATHVAIDPEIESI
Ga0335082_101974121	3300032782	Soil	MTSEAQRRAPFLTLQELVERYRGLVHAFGDPVAISRFGFSIEEADRLFSGLDEDYHISRFFNFTEESGAQRHSINGFPATHVA
Ga0335084_101692612	3300033004	Soil	MTSEAQRRAPFLTLQELVERYRGLVHAFGDPVAISRFGFSIEEADRLFSGLDEDYHISRFFNFTEESGAQRHSINGFPATHVAIDPEIESIL
Ga0335077_111662862	3300033158	Soil	MTSEAQRRAPFFTLQELVERYRGLVHAFGDPVAISRFGFSIEEADHLFSGLDEDYHISRFFNFTEESGAQRHSINGFPATHVAIDPEIESIL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087825

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences