Metagenome / Metatranscriptome Family F087810

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087810
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	81 residues
Representative Sequence	VSVNIQAKHERARDNRAYVRALLAERQPGLAALLRAVERQLDPPLPHDPRDWRRTMNTAWLYHRDGSECVDRWSCQ
Number of Associated Samples	95
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.64 %
% of genes near scaffold ends (potentially truncated)	98.18 %
% of genes from short scaffolds (< 2000 bps)	93.64 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.182 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.455 % of family members)
Environment Ontology (ENVO)	Unclassified (22.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.909 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.08% β-sheet: 4.81% Coil/Unstructured: 47.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF07690	MFS_1	25.45
PF16697	Yop-YscD_cpl	1.82
PF00440	TetR_N	0.91
PF00664	ABC_membrane	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.18 %
Unclassified	root	N/A	21.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.18 %
Unclassified	root	N/A	21.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.18 %
Unclassified	root	N/A	21.82 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.18 %
Unclassified	root	N/A	21.82 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.64 %
Unclassified	root	N/A	21.82 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.82 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	30.91 %
Unclassified	root	N/A	21.82 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.82 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	20.91 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1.82 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.82 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	20.00 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	1.82 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.82 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	20.00 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	1.82 %
Planotetraspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.82 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	20.00 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	1.82 %
Planotetraspora kaengkrachanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora kaengkrachanensis	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10418129	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300005146\|Ga0066817_1005835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	873	Open in IMG/M
3300005363\|Ga0008090_15606073	Not Available	779	Open in IMG/M
3300005436\|Ga0070713_100677708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	983	Open in IMG/M
3300005437\|Ga0070710_10949723	Not Available	623	Open in IMG/M
3300005445\|Ga0070708_100753675	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300005447\|Ga0066689_10826333	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300005471\|Ga0070698_101159546	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300005518\|Ga0070699_101305584	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300005547\|Ga0070693_100041196	All Organisms → cellular organisms → Bacteria	2597	Open in IMG/M
3300006163\|Ga0070715_10334495	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300006354\|Ga0075021_10825697	Not Available	599	Open in IMG/M
3300006794\|Ga0066658_10397850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	746	Open in IMG/M
3300006806\|Ga0079220_10413879	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300006871\|Ga0075434_101588846	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300006953\|Ga0074063_10065041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1102	Open in IMG/M
3300009093\|Ga0105240_10139056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	2905	Open in IMG/M
3300009094\|Ga0111539_13342902	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300009545\|Ga0105237_10956858	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300009551\|Ga0105238_10959832	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300009792\|Ga0126374_11830137	Not Available	508	Open in IMG/M
3300010335\|Ga0134063_10599995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora kaengkrachanensis	560	Open in IMG/M
3300010373\|Ga0134128_11860770	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300010375\|Ga0105239_11185367	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300010396\|Ga0134126_11102718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	885	Open in IMG/M
3300010396\|Ga0134126_11325258	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300010396\|Ga0134126_11965795	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300012224\|Ga0134028_1047847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300012349\|Ga0137387_10940107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	623	Open in IMG/M
3300012356\|Ga0137371_10899861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	673	Open in IMG/M
3300012473\|Ga0157340_1005966	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300012492\|Ga0157335_1013994	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300012507\|Ga0157342_1023732	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300012519\|Ga0157352_1044094	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300012961\|Ga0164302_10719659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300012976\|Ga0134076_10392501	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300012985\|Ga0164308_10512252	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300012987\|Ga0164307_11433941	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012988\|Ga0164306_10471910	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300012989\|Ga0164305_10829652	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300013297\|Ga0157378_11812439	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300013307\|Ga0157372_12108799	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300014968\|Ga0157379_10265087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1561	Open in IMG/M
3300016357\|Ga0182032_11524145	Not Available	581	Open in IMG/M
3300016371\|Ga0182034_11302861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	634	Open in IMG/M
3300020140\|Ga0179590_1060793	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300020579\|Ga0210407_10419183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1047	Open in IMG/M
3300020580\|Ga0210403_10190294	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300020580\|Ga0210403_10276871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1376	Open in IMG/M
3300020581\|Ga0210399_11355463	All Organisms → cellular organisms → Bacteria → Terrabacteria group	558	Open in IMG/M
3300021088\|Ga0210404_10439030	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300021170\|Ga0210400_10142699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1925	Open in IMG/M
3300021171\|Ga0210405_10211804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1536	Open in IMG/M
3300021403\|Ga0210397_10049621	All Organisms → cellular organisms → Bacteria	2687	Open in IMG/M
3300021404\|Ga0210389_11133197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300021432\|Ga0210384_11271580	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300021432\|Ga0210384_11534194	Not Available	572	Open in IMG/M
3300021479\|Ga0210410_10322622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1385	Open in IMG/M
3300021559\|Ga0210409_10396003	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300021559\|Ga0210409_10472235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1116	Open in IMG/M
3300021560\|Ga0126371_12004514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	696	Open in IMG/M
3300022722\|Ga0242657_1227470	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300025916\|Ga0207663_10042326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	2782	Open in IMG/M
3300025929\|Ga0207664_11616181	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300026318\|Ga0209471_1216437	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300026374\|Ga0257146_1047128	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300026490\|Ga0257153_1055139	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300026494\|Ga0257159_1072744	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300026911\|Ga0209620_1001257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1741	Open in IMG/M
3300027915\|Ga0209069_10840267	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300028828\|Ga0307312_10437801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	860	Open in IMG/M
3300030510\|Ga0268243_1076279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756	Open in IMG/M
3300030730\|Ga0307482_1243692	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300031231\|Ga0170824_122665598	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300031544\|Ga0318534_10398441	Not Available	790	Open in IMG/M
3300031561\|Ga0318528_10726360	Not Available	531	Open in IMG/M
3300031564\|Ga0318573_10407863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	730	Open in IMG/M
3300031564\|Ga0318573_10499405	Not Available	655	Open in IMG/M
3300031572\|Ga0318515_10479813	Not Available	664	Open in IMG/M
3300031715\|Ga0307476_10885855	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300031724\|Ga0318500_10736000	Not Available	504	Open in IMG/M
3300031748\|Ga0318492_10341192	Not Available	783	Open in IMG/M
3300031751\|Ga0318494_10345592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	860	Open in IMG/M
3300031765\|Ga0318554_10692818	Not Available	572	Open in IMG/M
3300031770\|Ga0318521_10988334	Not Available	516	Open in IMG/M
3300031771\|Ga0318546_10411832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	945	Open in IMG/M
3300031781\|Ga0318547_10991800	Not Available	525	Open in IMG/M
3300031798\|Ga0318523_10536346	Not Available	578	Open in IMG/M
3300031798\|Ga0318523_10673943	Not Available	508	Open in IMG/M
3300031819\|Ga0318568_10290010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1016	Open in IMG/M
3300031890\|Ga0306925_12105049	Not Available	528	Open in IMG/M
3300031896\|Ga0318551_10391738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	789	Open in IMG/M
3300031896\|Ga0318551_10907208	Not Available	514	Open in IMG/M
3300031896\|Ga0318551_10920109	Not Available	511	Open in IMG/M
3300032054\|Ga0318570_10535672	Not Available	534	Open in IMG/M
3300032180\|Ga0307471_104313658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300032770\|Ga0335085_10134146	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3136	Open in IMG/M
3300032770\|Ga0335085_10965519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	923	Open in IMG/M
3300032805\|Ga0335078_10553659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1463	Open in IMG/M
3300032897\|Ga0335071_11740155	Not Available	567	Open in IMG/M
3300032954\|Ga0335083_10476815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1049	Open in IMG/M
3300032954\|Ga0335083_10853437	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300032955\|Ga0335076_10139495	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2343	Open in IMG/M
3300033134\|Ga0335073_10005437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17875	Open in IMG/M
3300033134\|Ga0335073_11140069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	789	Open in IMG/M
3300033158\|Ga0335077_10848208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	926	Open in IMG/M
3300033158\|Ga0335077_10928103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	874	Open in IMG/M
3300033158\|Ga0335077_12222297	Not Available	503	Open in IMG/M
3300033290\|Ga0318519_10353372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	869	Open in IMG/M
3300033290\|Ga0318519_11040933	Not Available	509	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.09%
Host-Associated	Host-Associated	10.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.27%
Plants	Host-Associated → Plants	10.91%
Aquatic	Environmental → Aquatic	1.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.73%
Sediment	Environmental → Aquatic → Sediment	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.91%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.18%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.82%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	10.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012473	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.12.yng.090610	Host-Associated	Open in IMG/M
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026911	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_104181291	3300003505	Forest Soil	VSANIQAKHARARNNRAYVRELLAERQPGFAALLRAFEGQLDGKLAHDPRDWRRTMNTAWLYH
Ga0066817_10058352	3300005146	Soil	MVTSWPGDVVSANIQARHDRARANQAYVRDLLAERQPGFAALLRTVERQLDPERPHDPCDGRRTMNTVWLYHLDGSG
Ga0008090_156060732	3300005363	Tropical Rainforest Soil	VSANIQAGPDRARPDRARDNRAYVRELLAERQPGYAALLRAAERQMDRERPHDPCDWRRTMNTAWLYHLDGSGCVDGWSCQEQDHTSIPPRCG
Ga0070713_1006777082	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSVNIQAKHARARANRAYVRELLAERQPGFAALLRAVEEQLDGKLRHDPRAWRRAMNTAWLYHPDDS
Ga0070710_109497231	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VSGGWYRLAGEVFVSVNIQAKHERARDNRAYVRELLAERQPGFAAVLRAVERQLDAPRPHDPCDGRRILNTVWFYHRDGSECVDRW
Ga0070708_1007536752	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSVNIQAKHKRARDNRAYVRELLAERQPGLAAALRAVERQLDAPRPHDPRDGRRTLNTAWLYHRDGSECVDRWSCRDQDHTSVPPRCGAGAAG
Ga0066689_108263331	3300005447	Soil	MVTSRPGDYVSANIQARHNRARDNRAYVRELLAERQPGFAALLQAVEGQLAGKLLHDPRDWRRTMNTAWLYHLDGSECVDGWSCQEQ
Ga0070698_1011595462	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VSVNIQAKHKRARDNRAYVRELLAERQPGFAAVLRAVERQLDVPRPHDPRDGRRTLNTAWLYHRDGSECVDRW
Ga0070699_1013055841	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VSVNIQAKHERARDNRAYVRALLAERQPGLAALLRAVERQLDPPLPHDPRDWRRTMNTAWLYHRDGSECVDRWSCQ
Ga0070693_1000411961	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VSVNIQAKHQRARDNQAYVRELLAERQPGLAAVLRAVERQLDAPRPHHPRDGRRTLNTAWLYHRDGSECVDRWSCRDQDHTSVPPRCGAGAAG
Ga0070715_103344952	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VSVNIQAKHARARANRAYVRELLAERQPGFAALLRAVEEQLDGKLRHDPRAWRRAMNTAWLYHPDGSGCVDGWSCQEQ
Ga0075021_108256971	3300006354	Watersheds	MFVSANIQARHNRASDNRAYVRELLAERQPAFAALLRAVERQMDRERPHDPCDWRRSMNTAWLYHPDGSGCIDGWSCREQDHTSIPPRCGVRADGQPI
Ga0066658_103978503	3300006794	Soil	VSVNIQAKHTRARDNRAYVRELLAERQPGFAALLQAVEGQLAGKLLHDPRDWRRTMN
Ga0079220_104138793	3300006806	Agricultural Soil	VSVNIQATHTRARENRAYVRELLAERQPGFAALLRAVEGQLDGKLPHDPRDRRRTMNTAWLY
Ga0075434_1015888461	3300006871	Populus Rhizosphere	VSVNIQAKHERARDNRAYVRELLAERQPGLAAVLRAVEQQLDVPRPHDPRDGRRTLNTAWLYHRDGSECVDRWSC
Ga0074063_100650411	3300006953	Soil	VSANIQARHDRARANQAYVRDLLAERQPGFAALLRTVERQPDPERPHDPCDGRRTMNTVWLYHLDGSGCVDGWSCQQQDHTSIPPRCGVV
Ga0105240_101390561	3300009093	Corn Rhizosphere	VSVNIQAKHQRARDNQAYVRELLAERQPGLAAVLRAVERQLDAPRPHDPRDGRRTLNTAWLYHRDGSECVDRWSCQD
Ga0111539_133429021	3300009094	Populus Rhizosphere	VSVNIQAKHQRARDNQAYVRELLAERQPGLAAVLRAVERQLDAPWPHDPRDGRRTLNTAWLYHRDGSECVD
Ga0105237_109568581	3300009545	Corn Rhizosphere	VSVNIQAKHARARANRAYVRELLAERQPGFAALLRAVEGQLDGRLSHDPRAWRRAMNTAWLYHLDGSDCVDGWSCREQDHTSVPPRCGAGAAGRPVGCEL
Ga0105238_109598321	3300009551	Corn Rhizosphere	VSVNIQAKHQRARDNQAYVRELLAERQPGLAAVLRAVERQLDAPRPHHPRDGRRTLNTAWLYHRDGSECVDRWSCRDQ
Ga0126374_118301371	3300009792	Tropical Forest Soil	VSANIQARRDRARDNRAYVRELLAERQPGLAALLRAVERQLDGQLPHDPCDWRRTMNTAWLYHPDGSECVDRWSCREQDHTSVPP
Ga0134063_105999953	3300010335	Grasslands Soil	VSVNIQAKHKRARDNRAYVRELLAERQPGFAALLQAVEGQLAGKLLHDPRDWRRTMNTAWLYHLDGSECVDGWSCQEQDHTSVPPRCGAQAASRP
Ga0134128_118607701	3300010373	Terrestrial Soil	VSVNIQAKHQRARDNQAYVRELLAERQPGLAAVLRAVERQLDAPRPHDPRDGRRTLNTAWLY
Ga0105239_111853671	3300010375	Corn Rhizosphere	VSVNIQGKHQRARDNRARDNQAYVRELLAERQPGLAAVLRAVERQLDAPRPHDPRDGRRTVNTAWLYHRDGSECVDRWSCRDQDHTSVPPRCGAGAAGRPV
Ga0134126_111027182	3300010396	Terrestrial Soil	VSVNIQGKHQRARDNQAYVRELLAERQPGLAAVLRAVERQLDAPRPHDPRDGRRTLNTAWLYHRDGSECVDRWSCRDQ
Ga0134126_113252582	3300010396	Terrestrial Soil	VSVNIQGKHQRARDNRARDNQAYVRKLLAERQPGLAAVLRAVERQLDAPRPHDPRDGRRTVN
Ga0134126_119657951	3300010396	Terrestrial Soil	VRFVSVNIQAKHERARENRAYVRELLAERQPGFAAVLRAVERQLDVPRPHDPGDGRRTLNTAWLYHRDGSECVDRWSCQDQDHTSV
Ga0134028_10478472	3300012224	Grasslands Soil	VSANIQARPERTRDSRAIQNREYVRELLAERQPGLAALLQAVERQMGQERPHDPCDRRRTMNTAWLYHPDGSECVDGWSCQA
Ga0137387_109401071	3300012349	Vadose Zone Soil	VIFVSVNIQAGQDRTRDGRAIQNREYVRELLAERQPGLAALLRAVERQMDQERPHDPCDWRRTMNTAWLYHPDGSECVDSWSCQAQDHTSIP
Ga0137371_108998611	3300012356	Vadose Zone Soil	VRNLLAERQPGFAAFLRAVERQLDPGRPHDPCDWRRTMNTAWLYHLDGSCCVDGWSCRQQDHTSIPPRCGVMAAGRPFGCELPKGHPGPHLL
Ga0157340_10059661	3300012473	Arabidopsis Rhizosphere	VSVNIQAQHERARDNQAYVRELLAERQPGLAAVLRAVERQLDVPRPHDPRDGRRTVNTAWLYHRDGSECVDRWSCQDQDHTSVPPRC
Ga0157335_10139942	3300012492	Arabidopsis Rhizosphere	VSVNIQAKHERARDNRAYVRELLAERQPGLAAVLRAVERQLDVPRPHDPRDGRRTLNT
Ga0157342_10237322	3300012507	Arabidopsis Rhizosphere	VSVNIQAKHDRARDNRAYVRELLAERQPGLAAVLRAVERQLDAPRPREPRGAMRTLNTAWLYHRDGSECVD
Ga0157352_10440941	3300012519	Unplanted Soil	VSVNIQGKHQRARDNRARDNQAYVRKLLAERQPGLAAVLRAVERQLDAPRPHDPRDGRRTVNTAWLYHRDG
Ga0164302_107196591	3300012961	Soil	VSVNIQAKHKRARDNRAYVRELLAERQPGLASVLRTVERQLDAPRPHDPRDGRRTVNTAW
Ga0134076_103925011	3300012976	Grasslands Soil	VSVNIQAKRKRARDNRAYVRELLAERQPGLAAVLRAVERQLDVPRPHDPRDWRRTLNTAWLYHRDGSECVDRWSGQDQDHTSVPPRCGAGAAGRPIG
Ga0164308_105122521	3300012985	Soil	VSANIQAKHKRARDNRAFVRELLAERQPGFAALLRAVEEQLDGKLRHDPRAWRRAMNTAWLY
Ga0164307_114339411	3300012987	Soil	VSVNIQAKHARARANRAYVRELLAERQPGFAALLRAFEGQLDGKLAHDPRDWRRTMNTAWLYHLDGSVCVDRRSCREQDHTS
Ga0164306_104719101	3300012988	Soil	VSANIQAKHARARNNRAYVRELLAERQPGFAALLRAVEGQLDGKLLHDPRDWRRTMNTAWLYHLDGSECVDGWS
Ga0164305_108296521	3300012989	Soil	VSVNIQAKHTRARDNRAYVRELLAERQPGFAALLRAVEEQLDGKLRHDPRAWRRAMNTAWLYHPDGSGCVDGWSCQEQDHTSI
Ga0157378_118124391	3300013297	Miscanthus Rhizosphere	VSVNIQAKNQRARDNRAYVRELLAERQPGLAAVLRAVERQLDVPRPHDPRDGRRTLNTAWLY
Ga0157372_121087991	3300013307	Corn Rhizosphere	VSVNIQAKHKRARDNRAFVRELLAERQPGFAAVLRAVERQLDAPRPHDPRDGRRTLNTAW
Ga0157379_102650871	3300014968	Switchgrass Rhizosphere	VSVNIQGKHQRARDNRARDNQAYVRELLAERQPGLAAVLRAVERQLDAPRPQHPRDGRRTVNTAWLYHRDGSECVDRWSCRDQDHT
Ga0182032_115241451	3300016357	Soil	MRAHDNQEHVREPLGERQPGLAAALRAVDRQIDHELSAHPRGWRRTMNTAWLYHLDGSVCVDRWSCREEEHTSVPPHCGARDDDRPSG
Ga0182034_113028611	3300016371	Soil	VSANIQARHNRARDNQAYVRELLAERQPGYAALLRAAERQMDRKQPDDPCDWRRTMNTAWLYHLDGSGCVDGWCCQEQDHSSIPPRCGARA
Ga0179590_10607931	3300020140	Vadose Zone Soil	VSVNIQAKHERARDNRAYVRELLAARQPGLAAVLRAVERQLDVPRPNDPGDGRRTLNTAWLYHRDGSECVDRWSCQDQDHTSVPPRCGAGATGRPIGCELPKG
Ga0210407_104191832	3300020579	Soil	VSANIQAKRKRARDNRAYVRELLAERQPGLAALLRTVERQLDAPLPHDPRNWRRTVNTAWLYHRDGSECVDRWSCQERDHTSVPPRCDAGEEHPATLAS
Ga0210403_101902941	3300020580	Soil	VSANIQAKRKRARDNRAYVRELLAERQPGLAALLRTVERQLDAPLPHDPRDWRRTVNTAWLYHRDGSECVDRWSCQERDHTSVPPRCDAGEEHPATLAS
Ga0210403_102768711	3300020580	Soil	VSVNIQAKHTRARDNRAYVRELLAERQPGFAALLQAVEGQLDGKLLHDPRDWRRTMNTAWLYHLDGSECVDGWSCQEQDHTSVPPRCSAQAA
Ga0210399_113554631	3300020581	Soil	VSANIQARPDRTRDCPARENQRYVRELLAERQPGLAALLRAVERQIDQELPHDPCDWRRTMNTAWLYHPDGSECVDSWSCQAQNHTS
Ga0210404_104390301	3300021088	Soil	VSANIQAKRKRARDNRAYVRELLAERQPGLAALLRTVERQLDAPLPHDPRDWRRTVNTAWLY
Ga0210400_101426992	3300021170	Soil	VSVNIQAKHTRARDNRAYVRELLAERQPGFAALLRAFEGQLDGKLAHDPRDWRRTMNTAWLYHLDGSECVDGWSCQEQDHTSVPPRCGAQAASRPVG
Ga0210405_102118041	3300021171	Soil	VSANIQAKHKRARDNRAYVRELLAERQPGLAALLRAVERQLDAPLPHDPRDWRRTLNTAWLYHRDGSECVDRWSCQERDHTSVPPRCGAGAVG
Ga0210397_100496213	3300021403	Soil	VSANIQAKHARARDNRAYVRELLAERQPGFAALLRAVEGQLDGKLPLDPRDWRRTMNTAWLYHLDGSECVDGWSCREQDHTS
Ga0210389_111331971	3300021404	Soil	VSANIQARPDRTRDCPARENQRYVRELLAERQPGLAALLRAVERRIDQELPHDPCDWRRTMNTASLYHPDGSECVDSWSCQAQNHTSIPPRC
Ga0210384_112715802	3300021432	Soil	VSANIQAKHARARNNRAYVRELLAERQPGFAALLRAFEGQLDGKLAHDPRDWRRTMNTAWLY
Ga0210384_115341941	3300021432	Soil	MFVSANIQARHNRASDNRAYVRELLAERQPAFAALLRAVERQMDRERPHDPCDWRRSMNTAWLYHPDGS
Ga0210410_103226221	3300021479	Soil	VSANIQAKHARARNNRAYVRELLAERQPGFAALLRAFEGQLDGKLAHDPRDWRRTMNTAWLYHLDGSECVDGWSCQEQDHT
Ga0210409_103960033	3300021559	Soil	VSANIQAKHARARNNRAYVRELLAERQPGFAALLRAFEGQLDGKLAHDPRDWRRTMNTAWLYHLDGSECVDGWSCQAQDH
Ga0210409_104722352	3300021559	Soil	VSANIQAKRKRARDNRAYVRELLAERQPGLAALLRTVERQLDAPLPHDPRNWRRTVNTAWLYHRDGSEC
Ga0126371_120045141	3300021560	Tropical Forest Soil	VSANIQARPDQARHDQARPDRARPDRARDNRAYVRELLAERQPGYAALLRAAERQMDRERHDPCDWRRTMNTAWLYHLDGS
Ga0242657_12274702	3300022722	Soil	VSANIQAKHARARNNRAYVRELLAERQPGFAALLRAFEGQLDGKLAHDPRDWRRTMNTAWLYHLDGSECVDGWSCQEQDHTSVPPRCGAQAASRPVGCELPKG
Ga0207663_100423263	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VSVNIQAKHQRARDNQAYVRELLAERQPGLAAVLRAVERQLDAPRPHDPRDGRRTLNTAW
Ga0207664_116161811	3300025929	Agricultural Soil	VSVNIQAKHERARENRAYVRELLAERQPGFAAVLRAVERQLDAPRPHDPGDGRRTLNTAWLYHRDG
Ga0209471_12164371	3300026318	Soil	VSVNIQAKHTRARDNRAYVRELLAERQPGFAALLQAVEGQLAGKLLHDPRDWRRTMNTAWLYHLDG
Ga0257146_10471281	3300026374	Soil	VSVNIQAKHERARDNRAYVRELLAERQPGLAALLRAVERQLDAPLPHDPRDWRRTMNTAWLYHRDGSECV
Ga0257153_10551391	3300026490	Soil	VSVNIQAKHERARDNRAYVRELLAERQPALAALLRAVERQLDAPLPHDPRDWRRTMNTAWLYHRDGSECVDCWSCQDQDHTSVPPRCAAAAAG
Ga0257159_10727442	3300026494	Soil	VSVNIQAKHERARDNRAYVRELLAERQPGLAALLRAVERQLDAPLPHDPRDWRRTMNTAWLYH
Ga0209620_10012571	3300026911	Forest Soil	VSVNIQAKHQRARDNQAYVRELLAERQPGLAAVLRAVERQLDAPRPHDPRDGRRTVNTAWLYHRDGSECVDRWSCRDQDHTSVPPRCG
Ga0209069_108402671	3300027915	Watersheds	VSANIQAKHARARDNRAYVRELLAERQPGFAALLRAVEGQLDGWLPHDLRDWRRTMNTAWLYHLDGSECVDAWSCQEQDHT
Ga0307312_104378013	3300028828	Soil	VSVNIQAKHKRARDNRAYVRELLAERQPGLAAVLRAVERQLDVPRPHDPRDWRRTLNTAWLYHRDGSECVDRWSCQDQDHT
Ga0268243_10762791	3300030510	Soil	VSANIQAGHDRASNSRASDSRASDSRAGANRAYVRDLLAERQPGFAALLRAVERQLDTEPPRDPCDWRLTMNTAWLYHPDGSECVDSWSCRARDHTSIP
Ga0307482_12436921	3300030730	Hardwood Forest Soil	VSANTQAKHARARDNRAYVRELLAERQPGFAALLRAVEGQLDGKLPFDPRDWRRTMNTAWLYHLDGSECVDGWSCQEQDHTSVPPRCHARPADRAVGCELP
Ga0170824_1226655982	3300031231	Forest Soil	VSANIQAKHKRARDNRAYVRELLAERQPGLAALLRAVERQLDAPMPHDPRDWRRAMNTAWLYHREGSECVDRWSCQEQDHTSVPPRCGAGAAGRP
Ga0318534_103984411	3300031544	Soil	VSANIQARPDRVRDNQARDNQARDNRDDRARDNRAYVRELLAERQPGYAALLRAAERQMDRERHDPCDWRRTMNTAWLYHLDGSGCVDGWSCQEQDHTSI
Ga0318528_107263601	3300031561	Soil	MRAHDNQEHVREPLGERQPGLAAALRAVDRQIDHELSAHPRGWRRTMNTAWLYHLDGSVCVDRWSCRE
Ga0318573_104078631	3300031564	Soil	VSANIQARHDRARDNRARDNRAYVRELLAERQPGYAALLRAVERQMDCERPHDPCDWRHTMNTAWLYHLDGSGCIDGWSCQEQDHTSIPPRCG
Ga0318573_104994052	3300031564	Soil	VSANIQARPDRTRHDQARHDRARDNRAYVRALLAERQPGYAALLRAVERQMDRKRPHDPCDWRRTMNTAWLYHLDGSGCVDGW
Ga0318515_104798131	3300031572	Soil	VSANIQARPDRVRDNQARDNQARDNRDDRARDNRAYVRELLAERQPGYAALLRAAERQMDRERHDPCDWRRTMNTAWLYHLDGSGCVDGWSCQEQDHTSIPPRCGGRA
Ga0307476_108858552	3300031715	Hardwood Forest Soil	VSANIQAEHKRARDNRARDNRAYVRELLAERQPGLAALLRALERQLDAPLPHDPRDWKRAMNTAWLYHRDGSECVERWSCQEQDHTSVPPRCGAAGADRPIGCEL
Ga0318500_107360001	3300031724	Soil	VSANIQARPDRTRHDQARHDRARDNRAYVRALLAERQPGYAALLRAVERQMDRKRPHDPCDWRRTMNTAWLYHLDGSGCVDGWSCQEQNHTS
Ga0318492_103411921	3300031748	Soil	VSANIQARPDRVRDNQARDNQARDNRDDRARDNRAYVRELLAERQPGYAALLRAAERQMDRERHDPCDWRRTMNTAWLYHLDGSGCVDGWSCQEQDH
Ga0318494_103455921	3300031751	Soil	VSANIQARHDRARENQAYVRELLAERQPGYAALLRAAERQMDRMQPDDPCDWRRTMNTAWLYHLDGSGCVDGWSCQE
Ga0318554_106928181	3300031765	Soil	VSANIQARHDRARENQAYVRELLAERQPGYAALLRAAERQMDRMQPDDPCDWRRTMNTAWLYHLDGSGCVDGWSCQEQDHSSIPPRCGARAAPPPIG
Ga0318521_109883341	3300031770	Soil	VSANIQARPDRVRDNQARDNQARDNRDDRARDNRAYVRELLAERQPGYAALLRAAERQMDRERHDPCDWRRTMNTAWL
Ga0318546_104118322	3300031771	Soil	VSANIQARHDRARENQAYVRELLAERQPGYAALLRAAERQMDRKQPDDPCDWRRTMNTAWLYHLDGSGCVDG
Ga0318547_109918002	3300031781	Soil	VSANIQARPDRVRDNQARDNQARDNRDDRARDNRAYVRELLAERQPGYAALLRAAERQMDRERHDPCDWRRTMNTAWLYHLDGSGCVDGWSCQEQDHTSIPPRCGGRAGGRPIGCELPKGHP
Ga0318523_105363461	3300031798	Soil	MRAHDNQEHVREPLGERQPGLAAALRAVDRQIDHELSAHPRGWRRTMNTAWLYHLDGSVCVDRWSCREEEHTSVPPHCGARDVD
Ga0318523_106739432	3300031798	Soil	VSANIQARRDRARDNQAYVRELLAERQPGYAALLRAAERQMDRKQPDDPCDWRRTMNTAWLYHLD
Ga0318568_102900101	3300031819	Soil	VSANIQARPDRVRDNQARDNQARDNRDDRARDNRAYVRELLAERQPGYAALLRAAERQMD
Ga0306925_121050491	3300031890	Soil	VSVNIQARSDRARDNRAYVRELLAERQPEYAALLRAVEKQLAGQLSHDPCDRRRTMNT
Ga0318551_103917381	3300031896	Soil	MRAHDNQEHVREPLGERQPGLAAALRAVDRQIDHELSAHPRGWRRTMNTAWLYHLDGSVCVDRWSCREEEHTSVPPHCGARDDDRPSGC
Ga0318551_109072081	3300031896	Soil	VSANIQARPDRVRDNQARDNQARDNRDDRARDNRAYVRELLAERQPGYAALLRAAERQMDRERHDPCDWR
Ga0318551_109201091	3300031896	Soil	VSANIQARHDRARDNRAYVRELLAERQPGYAALLRTVEKQLDGQLSRDPCDRRRTMNTAWLYHLDGSGCVDGWACQEQDHTSIPPRCGVGVGG
Ga0318570_105356721	3300032054	Soil	VSANIQARPDRTRHDQARHDRARDNRAYVRALLAERQPGYAALLRAVERQMDRKRPHDPCDWRRTMNTAWLYHLDGSGCVDGWSCQE
Ga0307471_1043136582	3300032180	Hardwood Forest Soil	VSANTQAKHARARDNRAYVRELLAERQPGFAALLRAVEGQLDGKLPLDPRDWRRTMNTAWLYHLDGSECVDGWSCQEQDHTSVPPRCGVRAASR
Ga0335085_101341463	3300032770	Soil	VSANIQARPNRTGPDRASLDRARPDQARDDRARDNRAYVRELLAERQPGYAALLRTTERQMDRERPHD
Ga0335085_109655191	3300032770	Soil	VSANIQARHNRASDNRAYVRDLLAERQPAFAALLRAAERQMDRERPHDPCDWRRGMNTAWLYHPDGSGCVDGWSCQEQDHTS
Ga0335078_105536591	3300032805	Soil	VSANIQAGPDRARDNQARDNQARDNRAYVRELLAERQPGYAALLRAAERQMDRERPHDPCDWRRTMNTAWLY
Ga0335071_117401551	3300032897	Soil	VSANIQPRCDRARDNRAYVRELLAERQPAYAALLRAVERQMDREGQHDPGDWRRTMNTAWLYHLDGSGCVDGWSCQEQDHT
Ga0335083_104768151	3300032954	Soil	VSFVSANIRAKDNQEHVRELLDERHPGLAAALRAVERQVDRELSARPRGWRRTMNTAWLYHLDGSVCVDRWSCQEQ
Ga0335083_108534371	3300032954	Soil	MVVSVNIQAKHKRARDNRAYVRELLAERQPRLAALLRAVERQLDVPRPRDPRDWRRTLNTAWLYHRDGSECVDRWSCRDQDHTSVPPRCGAGAAGPPIGCEL
Ga0335076_101394951	3300032955	Soil	VSANIQARPNRTGPDRASLDRARPDQASPARARDDRARDNRAYVRELLAERQPGYAALLRTTERQMDRERPHDPCDWRRTMNTAWLYHLDGSGCVDGWSCQEQDHTSI
Ga0335073_100054371	3300033134	Soil	VRELLGERQPGLAAVLRAAERQIDQELSDGTPGPCGWRHIMNTAWLYHPDGSVCVDGWSCREQEHTSVPPRCGVLPADGPAGCE
Ga0335073_111400691	3300033134	Soil	VSANIQARPNRTGPDRASLDRARPDQASPDRARDDRARDNRAYVRELLAERQPGYAALLRTAERQ
Ga0335077_108482082	3300033158	Soil	MRARDNRKYVRELLGERQPGLAAVLRAVERQIDQELSDGTAGSWGWRYVMNTAWLYHLDGSVCVDGWSCREQEHTSVPPRCG
Ga0335077_109281032	3300033158	Soil	VSANIQAGPDRARDNRARDNRARDNRAYVRELLAERQPGYAALLRAAERQMDRERPHDPCDWRRTMNTAWLYHL
Ga0335077_122222971	3300033158	Soil	VSANIQARPDQARPDRARDNQARDNRAYVRELLAERQPGYAALLCAVERQMDRERPHDPCDWRRTMNTAWLYH
Ga0318519_103533722	3300033290	Soil	VSANIQARHDRARENQAYVRELLAERQPGYAALLRAAERQMDRMQPDDPCDWRRTMNTAWLYHLDGSGCVDGWSCREQ
Ga0318519_110409331	3300033290	Soil	VSANIQARHNRARDNQAYVRELLAERQPGYAALLRAAERQMDRKHPDDPCDWRRTMNTAWLYHLDGSGCVDGWSCREQDHSSIPPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087810

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences