Metagenome / Metatranscriptome Family F087795

Basic Information
Family ID	F087795
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	41 residues
Representative Sequence	SRPDLAQGTPVHAYLPPDALRVLAGAAGEVPLAEDEHLVAS
Number of Associated Samples	97
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.91 %
% of genes near scaffold ends (potentially truncated)	99.09 %
% of genes from short scaffolds (< 2000 bps)	97.27 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Unclassified (70.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.182 % of family members)
Environment Ontology (ENVO)	Unclassified (24.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.49% β-sheet: 0.00% Coil/Unstructured: 85.51%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF08240	ADH_N	59.09
PF01636	APH	3.64
PF13305	TetR_C_33	1.82
PF13669	Glyoxalase_4	1.82
PF00378	ECH_1	1.82
PF00027	cNMP_binding	0.91
PF13977	TetR_C_6	0.91
PF13847	Methyltransf_31	0.91
PF13360	PQQ_2	0.91
PF13751	DDE_Tnp_1_6	0.91
PF02661	Fic	0.91
PF12706	Lactamase_B_2	0.91
PF00903	Glyoxalase	0.91
PF03136	Pup_ligase	0.91
PF12840	HTH_20	0.91
PF00753	Lactamase_B	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
All Organisms	root	All Organisms	30.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
cellular organisms	root	All Organisms → cellular organisms	30.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	27.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.64 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17.27 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	3.64 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.91 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	3.64 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.91 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.64 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.91 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.00 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.64 %
Frankia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	0.91 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.91 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004615\|Ga0068926_1370643	Not Available	780	Open in IMG/M
3300005329\|Ga0070683_101977275	Not Available	560	Open in IMG/M
3300005406\|Ga0070703_10321372	Not Available	652	Open in IMG/M
3300005436\|Ga0070713_100396956	Not Available	1287	Open in IMG/M
3300005543\|Ga0070672_100553624	Not Available	999	Open in IMG/M
3300005545\|Ga0070695_101710258	Not Available	527	Open in IMG/M
3300006028\|Ga0070717_10823158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	845	Open in IMG/M
3300006028\|Ga0070717_11123121	Not Available	716	Open in IMG/M
3300006028\|Ga0070717_11969111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	527	Open in IMG/M
3300006034\|Ga0066656_10907920	Not Available	564	Open in IMG/M
3300006052\|Ga0075029_101221001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300006102\|Ga0075015_100551634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	669	Open in IMG/M
3300006162\|Ga0075030_100757750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300006163\|Ga0070715_10695843	Not Available	606	Open in IMG/M
3300006173\|Ga0070716_100216138	Not Available	1284	Open in IMG/M
3300006914\|Ga0075436_100959559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	641	Open in IMG/M
3300007076\|Ga0075435_101061906	Not Available	708	Open in IMG/M
3300009098\|Ga0105245_12410025	Not Available	580	Open in IMG/M
3300009520\|Ga0116214_1108143	Not Available	1024	Open in IMG/M
3300010376\|Ga0126381_104087872	Not Available	567	Open in IMG/M
3300010397\|Ga0134124_11471820	Not Available	708	Open in IMG/M
3300010401\|Ga0134121_12806915	Not Available	533	Open in IMG/M
3300010876\|Ga0126361_10240013	All Organisms → cellular organisms → Bacteria	1829	Open in IMG/M
3300012206\|Ga0137380_11601618	Not Available	535	Open in IMG/M
3300012285\|Ga0137370_10173881	Not Available	1255	Open in IMG/M
3300012351\|Ga0137386_10937841	Not Available	618	Open in IMG/M
3300012351\|Ga0137386_11232402	Not Available	522	Open in IMG/M
3300012469\|Ga0150984_108257326	Not Available	522	Open in IMG/M
3300012519\|Ga0157352_1056429	Not Available	600	Open in IMG/M
3300012930\|Ga0137407_11971520	Not Available	557	Open in IMG/M
3300012960\|Ga0164301_10812834	Not Available	716	Open in IMG/M
3300016319\|Ga0182033_11965803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	532	Open in IMG/M
3300016445\|Ga0182038_11131301	Not Available	696	Open in IMG/M
3300017924\|Ga0187820_1217391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300017947\|Ga0187785_10059230	Not Available	1453	Open in IMG/M
3300017955\|Ga0187817_10879922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300017959\|Ga0187779_10103779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1715	Open in IMG/M
3300017970\|Ga0187783_10252527	Not Available	1289	Open in IMG/M
3300017972\|Ga0187781_10658481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756	Open in IMG/M
3300017973\|Ga0187780_10481070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	886	Open in IMG/M
3300017974\|Ga0187777_10735610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	701	Open in IMG/M
3300017974\|Ga0187777_11306284	Not Available	533	Open in IMG/M
3300017994\|Ga0187822_10210324	Not Available	652	Open in IMG/M
3300018043\|Ga0187887_10587633	Not Available	657	Open in IMG/M
3300018085\|Ga0187772_10470847	Not Available	883	Open in IMG/M
3300018086\|Ga0187769_10954337	Not Available	649	Open in IMG/M
3300020582\|Ga0210395_10484564	Not Available	930	Open in IMG/M
3300021178\|Ga0210408_10999304	Not Available	647	Open in IMG/M
3300021401\|Ga0210393_10284112	All Organisms → cellular organisms → Bacteria	1343	Open in IMG/M
3300021403\|Ga0210397_10891960	Not Available	688	Open in IMG/M
3300021406\|Ga0210386_11797030	Not Available	504	Open in IMG/M
3300021477\|Ga0210398_10334326	Not Available	1235	Open in IMG/M
3300021560\|Ga0126371_11972718	Not Available	702	Open in IMG/M
3300022720\|Ga0242672_1142623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	509	Open in IMG/M
3300024225\|Ga0224572_1042677	Not Available	853	Open in IMG/M
3300024227\|Ga0228598_1066262	Not Available	721	Open in IMG/M
3300025885\|Ga0207653_10061902	Not Available	1264	Open in IMG/M
3300025903\|Ga0207680_10374960	Not Available	1002	Open in IMG/M
3300025921\|Ga0207652_11245175	Not Available	646	Open in IMG/M
3300025941\|Ga0207711_11521668	Not Available	612	Open in IMG/M
3300027765\|Ga0209073_10191478	Not Available	774	Open in IMG/M
3300027783\|Ga0209448_10159887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	751	Open in IMG/M
3300027817\|Ga0209112_10120664	Not Available	861	Open in IMG/M
3300027826\|Ga0209060_10105676	Not Available	1316	Open in IMG/M
3300027869\|Ga0209579_10178464	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1136	Open in IMG/M
3300028768\|Ga0307280_10340329	Not Available	552	Open in IMG/M
3300028789\|Ga0302232_10471607	Not Available	617	Open in IMG/M
3300028885\|Ga0307304_10248904	Not Available	773	Open in IMG/M
3300029944\|Ga0311352_11055980	Not Available	623	Open in IMG/M
3300030056\|Ga0302181_10249178	All Organisms → cellular organisms → Bacteria → Terrabacteria group	804	Open in IMG/M
3300030520\|Ga0311372_10512777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1755	Open in IMG/M
3300030617\|Ga0311356_11225860	Not Available	689	Open in IMG/M
3300030618\|Ga0311354_11972058	Not Available	503	Open in IMG/M
3300031234\|Ga0302325_10088556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5872	Open in IMG/M
3300031234\|Ga0302325_11464258	Not Available	883	Open in IMG/M
3300031236\|Ga0302324_103401988	Not Available	518	Open in IMG/M
3300031549\|Ga0318571_10152758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	799	Open in IMG/M
3300031549\|Ga0318571_10297525	Not Available	606	Open in IMG/M
3300031549\|Ga0318571_10450210	Not Available	511	Open in IMG/M
3300031668\|Ga0318542_10236701	Not Available	927	Open in IMG/M
3300031679\|Ga0318561_10150561	Not Available	1248	Open in IMG/M
3300031708\|Ga0310686_115418520	Not Available	522	Open in IMG/M
3300031713\|Ga0318496_10822686	Not Available	512	Open in IMG/M
3300031718\|Ga0307474_10576408	Not Available	886	Open in IMG/M
3300031751\|Ga0318494_10581382	Not Available	654	Open in IMG/M
3300031770\|Ga0318521_10315317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	922	Open in IMG/M
3300031778\|Ga0318498_10176520	Not Available	971	Open in IMG/M
3300031778\|Ga0318498_10350685	Not Available	659	Open in IMG/M
3300031821\|Ga0318567_10857262	Not Available	514	Open in IMG/M
3300031845\|Ga0318511_10232680	Not Available	824	Open in IMG/M
3300031845\|Ga0318511_10578242	Not Available	523	Open in IMG/M
3300031938\|Ga0308175_100494316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1299	Open in IMG/M
3300031959\|Ga0318530_10369075	Not Available	595	Open in IMG/M
3300032009\|Ga0318563_10518362	Not Available	644	Open in IMG/M
3300032043\|Ga0318556_10123293	Not Available	1326	Open in IMG/M
3300032067\|Ga0318524_10495142	Not Available	641	Open in IMG/M
3300032089\|Ga0318525_10181296	Not Available	1082	Open in IMG/M
3300032089\|Ga0318525_10251468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	908	Open in IMG/M
3300032160\|Ga0311301_10050189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9582	Open in IMG/M
3300032261\|Ga0306920_102822152	Not Available	661	Open in IMG/M
3300032515\|Ga0348332_10156388	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300032805\|Ga0335078_12593553	Not Available	520	Open in IMG/M
3300032828\|Ga0335080_10758329	Not Available	1006	Open in IMG/M
3300032893\|Ga0335069_10496836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1415	Open in IMG/M
3300032955\|Ga0335076_11648406	All Organisms → cellular organisms → Bacteria → Terrabacteria group	530	Open in IMG/M
3300033289\|Ga0310914_10089591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2625	Open in IMG/M
3300033289\|Ga0310914_10276289	Not Available	1513	Open in IMG/M
3300033289\|Ga0310914_10389938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1260	Open in IMG/M
3300033289\|Ga0310914_10963826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	753	Open in IMG/M
3300033290\|Ga0318519_10508692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	726	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.82%
Host-Associated	Host-Associated	8.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.55%
Plants	Host-Associated → Plants	8.18%
Aquatic	Environmental → Aquatic	7.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.45%
Peat	Environmental → Terrestrial → Peat	8.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.18%
Freshwater	Environmental → Aquatic → Freshwater	4.55%
Sediment	Environmental → Aquatic → Sediment	2.73%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.82%
Loam	Environmental → Terrestrial → Soil → Loam	10.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.73%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.18%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.45%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.18%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.18%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.18%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.73%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.82%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.91%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.91%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.91%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004615	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 11 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068926_13706431	3300004615	Peatlands Soil	PDLTQGTPVHCYLPPDALRVLADSPQEVPVPADEPLVAS*
Ga0070683_1019772753	3300005329	Corn Rhizosphere	RPDLAQGTPVHCYLPPEALRVLAGAAGEVPVAEDEHLVAS*
Ga0070703_103213722	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	ALMQNDGSRADLAQGTPVNVYLPPDALRVLAGAAGDVPLAEDEHLVAS*
Ga0070713_1003969561	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PDLAQGTPVNVYLPPDALRVLAGAAGEVPVAEDKPLVAS*
Ga0070672_1005536241	3300005543	Miscanthus Rhizosphere	AQGTPVNVYLPPDALRVLAGAAGDVPLAEDEHLVAS*
Ga0070695_1017102582	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LAQGTPVHVYLPPDALRVLAGAAGEVPLAEAEDEPLVAS*
Ga0070717_108231581	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PDLAQGTPVHAYLPPDALRVLAGSTAEVPVPEDEPLLAS*
Ga0070717_111231211	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	DLAQGTPVHAYLPPDALRVLAGSAAEVPVPEDEPLVAS*
Ga0070717_119691112	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AQGTPVHCYLPPEALRVLAGAAGEVPVAEDEHLVAS*
Ga0066656_109079201	3300006034	Soil	GSRPELTQGTPVHAYLPPDALRVLAGAAGEVPLAEDEHLVAS*
Ga0075029_1012210012	3300006052	Watersheds	GTPVHCYLPPDALRVLAGSAQEVPVPADEPLVAS*
Ga0075015_1005516343	3300006102	Watersheds	LAQGTPVHCYLPPDALRVLAGSAQEVPVPADEPLVAS*
Ga0075030_1007577502	3300006162	Watersheds	QGTPVHCYLPPDALRVLAGSAQEVPVPADEPLVAS*
Ga0070715_106958432	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	QGTPVHVYLPPDALRVLAGAQDVPVAEEEPLVAS*
Ga0070716_1002161383	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LAQGTPVHVYLPPDALRVLAGAAGEVPLAEDEHLVAS*
Ga0075436_1009595592	3300006914	Populus Rhizosphere	LAQGTPVHCYLPPDALRVLAGAAGEVPVAEDEHLVAS*
Ga0075435_1010619062	3300007076	Populus Rhizosphere	QGTPVHVYLPPDALRVLAGAAGEVPLAEDEHLVAS*
Ga0105245_124100252	3300009098	Miscanthus Rhizosphere	DGSRPDLAQGTPVHVYLPPDALRVLAGAAGEVPLAEAEDEPLVAS*
Ga0116214_11081431	3300009520	Peatlands Soil	GTPVHAYLPPDALRVLAGARGVVPAPAEEPLVTS*
Ga0126381_1040878722	3300010376	Tropical Forest Soil	ALAQGTPVHVYLPPDALRVLSGAAGEVPVAAEEEGPLVAT*
Ga0134124_114718202	3300010397	Terrestrial Soil	TPVHVYLPPDALRVLAGAAGEVPLAEAEDEPLVAS*
Ga0134121_128069151	3300010401	Terrestrial Soil	RPDLAQGIPVHVYLPPDALRVLAGAQDVPVPEEEPLVAS*
Ga0126361_102400133	3300010876	Boreal Forest Soil	PDLAQGTPVHCYLPPDALRVLAGAAREVPVPADEPLVAS*
Ga0137380_116016181	3300012206	Vadose Zone Soil	DGVRPDLTQGTPVHVFLPPEALRVLAGAQDVPVPEEEPLVAT*
Ga0137370_101738811	3300012285	Vadose Zone Soil	NDGSRPDLAQGTPVHVYLPPDALRVLAGAAGEVPLAEDEHLVAS*
Ga0137386_109378411	3300012351	Vadose Zone Soil	DGSRPDLAQGTPVHAYLPPDALRVLAGAAGEVPVAEDEPLVAS*
Ga0137386_112324022	3300012351	Vadose Zone Soil	QNDGARPDLTQGTPVHVFLPPDALRVLAGAQDVPVAEEEPLVAS*
Ga0150984_1082573261	3300012469	Avena Fatua Rhizosphere	NDGSHPDLSQGTPVHCYLPPDALRVLAGAAGEVPVAEEEPLVAS*
Ga0157352_10564291	3300012519	Unplanted Soil	GTPVNVYLPPDALRVLAGAAGDVPLAEDEHLVAS*
Ga0137407_119715202	3300012930	Vadose Zone Soil	RPELAQGTPVHAYLPPDALRVLAGAAGEVPLAEDEHLVAS*
Ga0164301_108128341	3300012960	Soil	ALMQNDGSRADLAQVTPVNVYRPPDALRVLAGAAGDVPLAEDEHLVAS*
Ga0182033_119658031	3300016319	Soil	GTQLDLASGTPVHCYLPPDALRVLAGAHDVPIAADEPLVAT
Ga0182038_111313012	3300016445	Soil	PLQAQMQNDGGQLDLAHGTPVLCYLPPDALRVLAGARGVVPAPVEEPLVAS
Ga0187820_12173912	3300017924	Freshwater Sediment	LAQGTPVHVYFPPDALRVLAGAAGEVPVAEDEPLVAT
Ga0187785_100592303	3300017947	Tropical Peatland	PDLTQGTPVNVYLPPDALRVLAGAAGEVPLAEDEHLVAS
Ga0187817_108799222	3300017955	Freshwater Sediment	RPDLTQGTPVHAYLPPDALRVLADSPREVPVPADEPLAAS
Ga0187779_101037791	3300017959	Tropical Peatland	GASLQALVQNDGEQLDLAPGTPVHCYLPPEALRVLAGAHDVPIAADEPLVAT
Ga0187783_102525271	3300017970	Tropical Peatland	GEHTDLAQGTPVHAYLPPDALRVLAGAAGEVPVAEDEPLVAT
Ga0187781_106584811	3300017972	Tropical Peatland	QLDLAQGTPVHCYLPPDALRVLAGAQDVPVPAEEPLVAT
Ga0187780_104810701	3300017973	Tropical Peatland	QLDLAQGTPVLCYLPPEALRVLAGAQDVPVPAEEPLVAT
Ga0187777_107356101	3300017974	Tropical Peatland	QRPDLAQGTPVQVYLPPDALRVLAGSRDVPVPAEEPLVAG
Ga0187777_113062841	3300017974	Tropical Peatland	HPDLAQGTPVHCYLPPDALRVLAGERADVPISADEPLVSR
Ga0187822_102103242	3300017994	Freshwater Sediment	DLAQGTPVHCYLPPDALRVLAGAHDVAIPADEPLVAT
Ga0187887_105876332	3300018043	Peatland	GERPDLTQGTPVHAHLPAEALRVLADAAGSVPVPADEPLVAS
Ga0187772_104708472	3300018085	Tropical Peatland	NDGSRPDLAQGTPVNCYLPSDALRVLAGSADKALVPEDEPLVAS
Ga0187769_109543372	3300018086	Tropical Peatland	GEHPDLAQGTPVHAYLPPDALRVLAGARGVVPAPAEEPLVAS
Ga0210395_104845641	3300020582	Soil	NDGAPPDLTQGTPVHCYLPPDALRVLAGAAGEVPVAEDEPLVAT
Ga0210408_109993042	3300021178	Soil	IQNDGDSPPLAQGTPVHVYLPPDGLRVLSGAAGEVPVAAEEGPLVAT
Ga0210393_102841123	3300021401	Soil	NDGERPDLTQGTPVHCYLPPDALRVLAGAAGEVPVAEDEPLVAT
Ga0210397_108919602	3300021403	Soil	QGTAVHAYLPPDALRVLAGARGVVPAPAEEPLVAS
Ga0210386_117970302	3300021406	Soil	DGEHPDLAQGTPVHAYLPPDALRVLAGARGVVPAPAEEPLVAS
Ga0210398_103343261	3300021477	Soil	HPDLAPGTPVHAYLPPDALRVLAGARGVVPVAAEEPLVAS
Ga0126371_119727182	3300021560	Tropical Forest Soil	SRPELTQGTPVHCYLPPDALRVLAGAAGEVPVAEDEHLVAT
Ga0242672_11426231	3300022720	Soil	SRPDLAQGTPVNVYLPPDALRVLAGSAGEVPIAEDEPLVAS
Ga0224572_10426771	3300024225	Rhizosphere	ERPDLTQGTPVHAHLPAEALRVLAGAAGSVPVAADEPLVAS
Ga0228598_10662622	3300024227	Rhizosphere	TQGTPVHAYLPPDALRVLAGARGVVPAPEEEPLVAS
Ga0207653_100619022	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	ALMQNDGSRADLAQGTPVNVYLPPDALRVLAGAAGDVPLAEDEHLVAS
Ga0207680_103749601	3300025903	Switchgrass Rhizosphere	LMQNDGSRADLAQGTPVNVYLPPDALRVLAGAAGDVPLAEDEHLVAS
Ga0207652_112451752	3300025921	Corn Rhizosphere	DGSRADLAQGTPVNVYLPPDALRVLAGAAGDVPLAEDEHLVAS
Ga0207711_115216681	3300025941	Switchgrass Rhizosphere	QNDGSRADLAQGTPVNVYLPPDALRVLAGAAGDVPLAEDEHLVAS
Ga0209073_101914782	3300027765	Agricultural Soil	DGSRPDLAQGTPVHCYLPPDALRVLAGAAGEVPVAEDEHLVAS
Ga0209448_101598871	3300027783	Bog Forest Soil	DGERPELTRGTPVHCYLPPDALRVLAGSAQEVPVPADEPLVAS
Ga0209112_101206641	3300027817	Forest Soil	TQGTPVHVYLPPDSLRVLAGASEVAPEPADEPLVAS
Ga0209060_101056761	3300027826	Surface Soil	DLAQGTPVHAYLPPDALRVLAGARGVVPEPEPLVTS
Ga0209579_101784642	3300027869	Surface Soil	GGSPDLAQGTPVHVYLPPDALRVLAGAAGEVPVAEDEPLVAT
Ga0307280_103403291	3300028768	Soil	MQNDGVRPDLTQGTPVHVFLPPDALRVLAGAQDVPIPEEEPLVAS
Ga0302232_104716071	3300028789	Palsa	GVSVQALMQNDGERPDLTQGTPVHAHLPAEALRVLAGAAGSVPVAADEPLVAS
Ga0307304_102489042	3300028885	Soil	TQGTPVHVYLPPDALRVLAGAQDVPVAEEEPLVAS
Ga0311352_110559801	3300029944	Palsa	RPDLTQGTPVHAHLPAEALRVLAGTSSPLPVPADEPLVAS
Ga0302181_102491782	3300030056	Palsa	LAQGTPVHAHLPAEALRVLAGSAAEVPVAADEPLVAR
Ga0311372_105127773	3300030520	Palsa	QGTPVHAHLPAEALRVLAGTSSPLPVPADEPLVAS
Ga0311356_112258601	3300030617	Palsa	WLAPGVLVQALVQNDGERPDLTQGTPVHAHLPTEALRVLAGTAGSVPVAADEPLVPS
Ga0311354_119720581	3300030618	Palsa	DLTQGTPVHAHLPAEALRVLAGTSSPLPVPADEPLVAS
Ga0302325_100885561	3300031234	Palsa	VSVQALMQNDGERPDLTQGTPVHAHLPAEALRVLAGAAGSVPVAADEPLVAS
Ga0302325_114642581	3300031234	Palsa	DLAQGTPVHAYLPPDALRVLAGARGVVPAPAEEPLVAT
Ga0302324_1034019882	3300031236	Palsa	DGDRPDLTQGTPVHAHLPAEALRVLAGAAGPLPVAADEPLVAS
Ga0318571_101527582	3300031549	Soil	DLAQGTPVHVYLPPDALRVLAGAAGEVPLAEDEQLVVS
Ga0318571_102975251	3300031549	Soil	GEHPDLAQGTPVHAYLPPDALRVLAGARDVAPALEEEPLVAS
Ga0318571_104502101	3300031549	Soil	MQNDGSRPDLAQGTPVNVYLPPDALRVLTGAAGEVPLAEDEHLVTT
Ga0318542_102367011	3300031668	Soil	DLAQGTPVNVYLPPDALRVLTGAAGEVPLAEDEHLVTT
Ga0318561_101505611	3300031679	Soil	QGSPIHAFLPPDALRVLAGARGVVPAPAEEPLVAS
Ga0310686_1154185201	3300031708	Soil	QNDGEHPDLAQGTPVHCYLPPHALRVLSGAAGEVPVPEDEPLVAS
Ga0318496_108226861	3300031713	Soil	GERPDLAQGSPVHAYLPPDALRVLAGASAEVPLAEDEPLVAS
Ga0307474_105764082	3300031718	Hardwood Forest Soil	RPDLVQGTPVHAYLPPDALRVLAGARGVVPAPAQEPLVAS
Ga0318494_105813821	3300031751	Soil	PELNQGSPIHAFLPPDALRVLAGARGVVPAPAEEPLVAS
Ga0318521_103153171	3300031770	Soil	DLAQGTPVHVYLPPDALRILAGAAGEVPLAEDEHLVVS
Ga0318498_101765201	3300031778	Soil	LLRLAPGNALQALMQNDGSRPDLTQGTPVNVYLPPNALRVLAGAAGEVRLAEDEHLVVS
Ga0318498_103506852	3300031778	Soil	HLDLAQGTPVHAYLPPDALRVLAGARNVAPAPEEEPLVAS
Ga0318567_108572622	3300031821	Soil	HPDLAQGTPVHAYLPPDALRVLAGARGVVPAPAEEPLVAS
Ga0318511_102326801	3300031845	Soil	AQGTPVNVYLPPDALRVLTGAAGEVPLAEDEHLVTT
Ga0318511_105782421	3300031845	Soil	DLAQGTPVHVYLPPDALRVLTGAAGEVPLAEDEHLVAS
Ga0308175_1004943162	3300031938	Soil	MQNDGSRADLAQGTPVNVYLPPDALRVLAGATGEVPLAEDEHLVAS
Ga0318530_103690752	3300031959	Soil	AQGTPVNVYLPPDALRVLAGSAGEVPIAEDEPLVAS
Ga0318563_105183621	3300032009	Soil	DLAQGTPVHAYLPPDALRVLAGARDVAPALEEEPLVAS
Ga0318556_101232931	3300032043	Soil	RPDLTQGTPVHVYLPPDALRVLAGAAGEVPLAEDEHLVVS
Ga0318524_104951421	3300032067	Soil	EHPDLAQGTPVHAYLPPDALRVLAGARGVVPAPVEEPLVAS
Ga0318525_101812961	3300032089	Soil	ELNQGTPIHAFLPPDALRVLAGARGVVPAPAEEPLVAS
Ga0318525_102514681	3300032089	Soil	PDHRVRPDLAQGTPVHVYLPPHALRVLAGAAGEVPLAEDEHLVAS
Ga0311301_100501891	3300032160	Peatlands Soil	HPDLAQGTPVHAYLPPDALRVLAGARGVVPAPAEEPLVTS
Ga0306920_1028221521	3300032261	Soil	DGEHPDLAQGTPVHAYLPPDALRVLAGARGVVPVPAEEPLVAS
Ga0348332_101563881	3300032515	Plant Litter	PELTQGTPVHCYLPPDALRVLAGSPGEVPVPADEPLVAS
Ga0335078_125935532	3300032805	Soil	SRPDLAQGTPVHAYLPPDALRVLAGAAGEVPLAEDEHLVAS
Ga0335080_107583292	3300032828	Soil	SRPDLAQGTPVHVYLPPDALRVLTGAAGEVPLAEDEHLVAS
Ga0335069_104968363	3300032893	Soil	QGTPVHVYLPPDALRVLTGAAGEVPLAEDEHLVAS
Ga0335076_116484062	3300032955	Soil	RPDLAQGTPVHVYLPPDALRVLTGAAGAVPLAEDEHLVAS
Ga0310914_100895911	3300033289	Soil	PDLTQGTPVNVYLPPNALRVLAGAAGEVRLAEDEHLVVS
Ga0310914_102762893	3300033289	Soil	LAQGTPVHVYLPPDALRVLAGATGEVPLAEDEHLVVS
Ga0310914_103899381	3300033289	Soil	DGEHPDLAQGTPVHAYLPPDALRVLAGARGAVPVPEEEPLVAS
Ga0310914_109638262	3300033289	Soil	VSLQALMQNDGTQLDLASGTPVHCYLPPDALRVLAGAHDVPIAADEPLVAT
Ga0318519_105086922	3300033290	Soil	NGGTQLDLASGTPVHCYLPPDALRVLAGAHDVPIAADEPLVAT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087795

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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