Metagenome Family F087733

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087733
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	58 residues
Representative Sequence	MKWALIIYFFIAGPGGGWHESERTFYETKQECIEYRDFFNDMPKPGTLMARCKRADSIS
Number of Associated Samples	89
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.73 %
% of genes near scaffold ends (potentially truncated)	29.09 %
% of genes from short scaffolds (< 2000 bps)	83.64 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.182 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (52.727 % of family members)
Environment Ontology (ENVO)	Unclassified (91.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (74.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 14.94% β-sheet: 29.89% Coil/Unstructured: 55.17%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.45.1.0: automated matches	d4yjma_	4yjm	0.68352
d.45.1.2: Adaptor protein ClpS (YljA)	d3dnja_	3dnj	0.67956
d.45.1.0: automated matches	d7d34a1	7d34	0.66129
d.58.5.0: automated matches	d6mm2a1	6mm2	0.66115
d.58.29.0: automated matches	d4wp9a1	4wp9	0.64546

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01135	PCMT	6.36
PF01844	HNH	4.55
PF05711	TylF	1.82
PF02195	ParBc	1.82
PF00294	PfkB	0.91
PF03104	DNA_pol_B_exo1	0.91
PF16320	Ribosomal_L12_N	0.91
PF13394	Fer4_14	0.91
PF07724	AAA_2	0.91
PF13489	Methyltransf_23	0.91
PF13578	Methyltransf_24	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	6.36
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	6.36
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	6.36
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	6.36
COG0417	DNA polymerase B elongation subunit	Replication, recombination and repair [L]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
All Organisms	root	All Organisms	41.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
cellular organisms	root	All Organisms → cellular organisms	36.36 %
Viruses	superkingdom	All Organisms → Viruses	5.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.73 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	1.82 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	25.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.73 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.82 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	25.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.73 %
Candidatus Lambdaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Lambdaproteobacteria	1.82 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.82 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	25.45 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	3.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.73 %
Candidatus Lambdaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Lambdaproteobacteria → Candidatus Lambdaproteobacteria bacterium	1.82 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.82 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	0.91 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	25.45 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	3.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.73 %
Candidatus Lambdaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Lambdaproteobacteria → Candidatus Lambdaproteobacteria bacterium	1.82 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.82 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	0.91 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	25.45 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	3.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.73 %
Candidatus Lambdaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Lambdaproteobacteria → Candidatus Lambdaproteobacteria bacterium	1.82 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.82 %
unclassified Pelagibacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae	0.91 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.18 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	25.45 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	3.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.73 %
Candidatus Lambdaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Lambdaproteobacteria → Candidatus Lambdaproteobacteria bacterium	1.82 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.82 %
Pelagibacteraceae bacterium TMED232	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED232	0.91 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000142\|LPaug09P16500mDRAFT_c1038158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	723	Open in IMG/M
3300000247\|LPaug09P26500mDRAFT_1040681	Not Available	567	Open in IMG/M
3300002518\|JGI25134J35505_10035420	Not Available	1360	Open in IMG/M
3300005402\|Ga0066855_10190162	Not Available	665	Open in IMG/M
3300005402\|Ga0066855_10267609	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	561	Open in IMG/M
3300005408\|Ga0066848_10030679	Not Available	1512	Open in IMG/M
3300005423\|Ga0066828_10316762	Not Available	500	Open in IMG/M
3300005425\|Ga0066859_10087805	Not Available	937	Open in IMG/M
3300005427\|Ga0066851_10026896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2083	Open in IMG/M
3300005430\|Ga0066849_10218036	Not Available	740	Open in IMG/M
3300005508\|Ga0066868_10046148	Not Available	1397	Open in IMG/M
3300005520\|Ga0066864_10023276	Not Available	1932	Open in IMG/M
3300005521\|Ga0066862_10116487	Not Available	908	Open in IMG/M
3300005521\|Ga0066862_10245818	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	586	Open in IMG/M
3300005593\|Ga0066837_10159422	Not Available	816	Open in IMG/M
3300005593\|Ga0066837_10345274	Not Available	520	Open in IMG/M
3300005595\|Ga0066833_10085685	Not Available	869	Open in IMG/M
3300005599\|Ga0066841_10000524	All Organisms → cellular organisms → Bacteria → Proteobacteria	6074	Open in IMG/M
3300005603\|Ga0066853_10016263	Not Available	2627	Open in IMG/M
3300005605\|Ga0066850_10105087	Not Available	1063	Open in IMG/M
3300005913\|Ga0075108_10141356	All Organisms → Viruses	863	Open in IMG/M
3300006093\|Ga0082019_1051126	Not Available	739	Open in IMG/M
3300006166\|Ga0066836_10475742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	755	Open in IMG/M
3300006308\|Ga0068470_1214323	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1904	Open in IMG/M
3300006310\|Ga0068471_1213434	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	786	Open in IMG/M
3300006310\|Ga0068471_1215455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	760	Open in IMG/M
3300006738\|Ga0098035_1060635	Not Available	1364	Open in IMG/M
3300006738\|Ga0098035_1201051	Not Available	665	Open in IMG/M
3300006754\|Ga0098044_1138456	Not Available	980	Open in IMG/M
3300006902\|Ga0066372_10433392	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	764	Open in IMG/M
3300007291\|Ga0066367_1410198	All Organisms → Viruses → environmental samples → uncultured virus	544	Open in IMG/M
3300007509\|Ga0105012_1067139	Not Available	1618	Open in IMG/M
3300009173\|Ga0114996_10795422	Not Available	685	Open in IMG/M
3300009376\|Ga0118722_1207348	All Organisms → Viruses → Predicted Viral	1187	Open in IMG/M
3300009706\|Ga0115002_10558839	Not Available	824	Open in IMG/M
3300009786\|Ga0114999_10366292	Not Available	1142	Open in IMG/M
3300010883\|Ga0133547_11880453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Lambdaproteobacteria → Candidatus Lambdaproteobacteria bacterium	1102	Open in IMG/M
3300017775\|Ga0181432_1311064	Not Available	500	Open in IMG/M
3300020262\|Ga0211537_1046832	Not Available	802	Open in IMG/M
3300020361\|Ga0211531_1180456	Not Available	552	Open in IMG/M
3300020383\|Ga0211646_10289096	Not Available	580	Open in IMG/M
3300020389\|Ga0211680_10298690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	597	Open in IMG/M
3300020399\|Ga0211623_10141748	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	837	Open in IMG/M
3300020449\|Ga0211642_10009917	Not Available	4527	Open in IMG/M
3300021065\|Ga0206686_1082388	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	963	Open in IMG/M
3300021087\|Ga0206683_10334805	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	767	Open in IMG/M
3300021089\|Ga0206679_10089136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1805	Open in IMG/M
3300021185\|Ga0206682_10057883	Not Available	2076	Open in IMG/M
3300021442\|Ga0206685_10226148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	631	Open in IMG/M
3300021791\|Ga0226832_10543201	Not Available	505	Open in IMG/M
3300022225\|Ga0187833_10206654	Not Available	1149	Open in IMG/M
3300022225\|Ga0187833_10311319	Not Available	871	Open in IMG/M
3300022227\|Ga0187827_10036398	Not Available	4168	Open in IMG/M
3300022227\|Ga0187827_10067582	Not Available	2773	Open in IMG/M
3300022227\|Ga0187827_10221447	Not Available	1269	Open in IMG/M
3300022837\|Ga0222711_1002787	All Organisms → Viruses → Predicted Viral	3848	Open in IMG/M
3300022865\|Ga0222668_1011275	Not Available	1810	Open in IMG/M
3300022867\|Ga0222629_1067309	Not Available	545	Open in IMG/M
3300025078\|Ga0208668_1009072	Not Available	2213	Open in IMG/M
3300025112\|Ga0209349_1043587	All Organisms → Viruses → Predicted Viral	1435	Open in IMG/M
3300025112\|Ga0209349_1130917	Not Available	690	Open in IMG/M
3300025131\|Ga0209128_1097256	Not Available	956	Open in IMG/M
3300025131\|Ga0209128_1229218	Not Available	507	Open in IMG/M
3300025141\|Ga0209756_1143732	Not Available	968	Open in IMG/M
3300025141\|Ga0209756_1181373	Not Available	821	Open in IMG/M
3300026166\|Ga0208276_1003255	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	2452	Open in IMG/M
3300026204\|Ga0208521_1154115	Not Available	579	Open in IMG/M
3300026209\|Ga0207989_1067280	Not Available	952	Open in IMG/M
3300026210\|Ga0208642_1054835	Not Available	930	Open in IMG/M
3300026211\|Ga0208132_1053284	Not Available	979	Open in IMG/M
3300026212\|Ga0208409_1063945	Not Available	891	Open in IMG/M
3300026254\|Ga0208522_1109209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	739	Open in IMG/M
3300026257\|Ga0208407_1136727	Not Available	753	Open in IMG/M
3300026259\|Ga0208896_1081371	Not Available	941	Open in IMG/M
3300026261\|Ga0208524_1017221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Lambdaproteobacteria → Candidatus Lambdaproteobacteria bacterium	2357	Open in IMG/M
3300026267\|Ga0208278_1007436	Not Available	3460	Open in IMG/M
3300026268\|Ga0208641_1000957	All Organisms → cellular organisms → Bacteria → Proteobacteria	15503	Open in IMG/M
3300026268\|Ga0208641_1096106	Not Available	846	Open in IMG/M
3300026269\|Ga0208766_1063501	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1113	Open in IMG/M
3300027838\|Ga0209089_10092669	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1873	Open in IMG/M
3300027838\|Ga0209089_10257973	Not Available	1007	Open in IMG/M
3300027844\|Ga0209501_10400113	Not Available	813	Open in IMG/M
3300027847\|Ga0209402_10243179	Not Available	1150	Open in IMG/M
3300028190\|Ga0257108_1016133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2221	Open in IMG/M
3300028190\|Ga0257108_1042173	Not Available	1374	Open in IMG/M
3300028192\|Ga0257107_1085888	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	947	Open in IMG/M
3300028535\|Ga0257111_1183640	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	628	Open in IMG/M
3300031605\|Ga0302132_10003435	All Organisms → cellular organisms → Bacteria	8978	Open in IMG/M
3300031605\|Ga0302132_10003507	All Organisms → cellular organisms → Bacteria	8880	Open in IMG/M
3300031605\|Ga0302132_10507718	Not Available	529	Open in IMG/M
3300031606\|Ga0302119_10259463	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	658	Open in IMG/M
3300031775\|Ga0315326_10355028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	956	Open in IMG/M
3300031801\|Ga0310121_10314954	Not Available	912	Open in IMG/M
3300031802\|Ga0310123_10257601	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1159	Open in IMG/M
3300031803\|Ga0310120_10219239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1034	Open in IMG/M
3300031811\|Ga0310125_10140851	Not Available	1256	Open in IMG/M
3300031886\|Ga0315318_10712558	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	563	Open in IMG/M
3300032006\|Ga0310344_11593670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	530	Open in IMG/M
3300032011\|Ga0315316_11038165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	666	Open in IMG/M
3300032032\|Ga0315327_10902401	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	531	Open in IMG/M
3300032032\|Ga0315327_10929400	Not Available	522	Open in IMG/M
3300032048\|Ga0315329_10145488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1228	Open in IMG/M
3300032048\|Ga0315329_10249507	Not Available	938	Open in IMG/M
3300032048\|Ga0315329_10386977	Not Available	745	Open in IMG/M
3300032048\|Ga0315329_10540717	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	620	Open in IMG/M
3300032073\|Ga0315315_11037415	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	734	Open in IMG/M
3300032130\|Ga0315333_10026384	Not Available	2494	Open in IMG/M
3300032278\|Ga0310345_11216186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → unclassified Pelagibacteraceae → Pelagibacteraceae bacterium TMED232	737	Open in IMG/M
3300032360\|Ga0315334_10038224	Not Available	3413	Open in IMG/M
3300032360\|Ga0315334_11632674	All Organisms → Viruses → environmental samples → uncultured virus	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	96.36%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	3.64%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	70.91%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	16.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified	5.45%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	3.64%
Coastal	Environmental → Aquatic → Marine → Coastal	1.82%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.91%
Strait	Environmental → Aquatic → Marine → Strait	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	66.36%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	16.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	5.45%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	4.55%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	3.64%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.82%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.91%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	52.73%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	16.36%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	7.27%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	6.36%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	5.45%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	4.55%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	2.73%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.82%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.91%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.91%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000142	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 500m	Environmental	Open in IMG/M
3300000247	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P26 500m	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300005402	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73	Environmental	Open in IMG/M
3300005408	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72	Environmental	Open in IMG/M
3300005423	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47	Environmental	Open in IMG/M
3300005425	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005430	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69	Environmental	Open in IMG/M
3300005508	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259	Environmental	Open in IMG/M
3300005520	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251	Environmental	Open in IMG/M
3300005521	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255	Environmental	Open in IMG/M
3300005593	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86	Environmental	Open in IMG/M
3300005595	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47B	Environmental	Open in IMG/M
3300005599	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF91A	Environmental	Open in IMG/M
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300005913	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK1	Environmental	Open in IMG/M
3300006093	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP189	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300007291	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M
3300007509	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009376	Combined Assembly of Gp0137079, Gp0137080	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300020262	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556100-ERR599172)	Environmental	Open in IMG/M
3300020361	Marine microbial communities from Tara Oceans - TARA_B100000071 (ERX556078-ERR599167)	Environmental	Open in IMG/M
3300020383	Marine microbial communities from Tara Oceans - TARA_B100000929 (ERX556043-ERR598971)	Environmental	Open in IMG/M
3300020389	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)	Environmental	Open in IMG/M
3300020399	Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947)	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300021065	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 500m 12015	Environmental	Open in IMG/M
3300021087	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015	Environmental	Open in IMG/M
3300021089	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015	Environmental	Open in IMG/M
3300021185	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015	Environmental	Open in IMG/M
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022837	Saline water microbial communities from Ace Lake, Antarctica - #1699	Environmental	Open in IMG/M
3300022865	Saline water microbial communities from Ace Lake, Antarctica - #728	Environmental	Open in IMG/M
3300022867	Saline water microbial communities from Ace Lake, Antarctica - #1	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300026166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF91A (SPAdes)	Environmental	Open in IMG/M
3300026204	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47 (SPAdes)	Environmental	Open in IMG/M
3300026209	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65 (SPAdes)	Environmental	Open in IMG/M
3300026210	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251 (SPAdes)	Environmental	Open in IMG/M
3300026211	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199 (SPAdes)	Environmental	Open in IMG/M
3300026212	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201 (SPAdes)	Environmental	Open in IMG/M
3300026254	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86 (SPAdes)	Environmental	Open in IMG/M
3300026257	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)	Environmental	Open in IMG/M
3300026259	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63 (SPAdes)	Environmental	Open in IMG/M
3300026261	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61 (SPAdes)	Environmental	Open in IMG/M
3300026267	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259 (SPAdes)	Environmental	Open in IMG/M
3300026268	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253 (SPAdes)	Environmental	Open in IMG/M
3300026269	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263 (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental	Open in IMG/M
3300027847	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)	Environmental	Open in IMG/M
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental	Open in IMG/M
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental	Open in IMG/M
3300028535	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_500m	Environmental	Open in IMG/M
3300031605	Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1	Environmental	Open in IMG/M
3300031606	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Tmax	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300031802	Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057	Environmental	Open in IMG/M
3300031803	Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983	Environmental	Open in IMG/M
3300031811	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300032130	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPaug09P16500mDRAFT_10381582	3300000142	Marine	MKWILIIYFFIGGPSGGWFESERTVYETKEMCIEYRDFFNSMPKPGTLLARCERANSVGK
LPaug09P26500mDRAFT_10406813	3300000247	Marine	MKVWLLIIYFFTVGPNGGWIEVDRTLFYTKQQCMESMDYFNAIPMPGTLTARCKRADS
JGI25134J35505_100354201	3300002518	Marine	MKWALIIYFFIAGPNGGWFESERTIYETKEICIEYRDFFNSMPKPGTLLARCKRIENTH*
Ga0066855_101901623	3300005402	Marine	MKWMLIIYFFIGGPDGGWKEGEITFYDTKQQCIEYRDFFNALPKPGTLMARCKRA
Ga0066855_102676092	3300005402	Marine	MKWILIIYFFIGGPNGGWHEGERTFYETKQQCIEYRDFFNALPKPGTLMARCKRADSVSK
Ga0066848_100306791	3300005408	Marine	MKWVLIIYFFIGGPDGGWFESERTIYETKEICIEYRDFFNSMPKPGTLLARCERIENTH*
Ga0066828_103167622	3300005423	Marine	MKWVLIIYFFISGPNGGWFESERTIYETKEICIEYRDFFNSMPKPGTLLARCKRIENTH*
Ga0066859_100878052	3300005425	Marine	MKWALIIYFFTAGPDGGWHESERTFYQTKEICVEYRDFFNNMPKPGTLMAKCKMADGYARYNNINSN*
Ga0066851_100268962	3300005427	Marine	MKWVLIIYFFIAGPNGGWHESERTVYETNEICIEYKDFFNSMPKPGTLMAKCKRADSISQ
Ga0066849_102180363	3300005430	Marine	MHWVLIIYFFIGGPGGGWHESERTYFKTKEECIEHRDFFNEMPKPGTLMARCKRADTVS*
Ga0066868_100461483	3300005508	Marine	MKWVLIIYFFIGGPDGGWFESERTIYETKEICIEYRDFFNSMPKPGTLLARCKRIENTH*
Ga0066864_100232766	3300005520	Marine	LIMKWVLIIYFFIAGPNGGWFESERTIYETKEICIEYRDFFNSMPKPGTLLARCKRIENTH*
Ga0066862_101164873	3300005521	Marine	MKWVLIIYFFIAGPNGGWFESERTIYETKEICIEYRDFFNSMPKPGTLMARCKRIENTH*
Ga0066862_102458182	3300005521	Marine	MKWILIIYFFTAGPGGGWYESEKIIYPTKQECIEYRDFFNEMPKPGTLMARCKRADSVS*
Ga0066837_101594223	3300005593	Marine	MKWALIIYFFIAGPGGGWHESERTYFKTKKECIEHRDFFNTLPKPGTLMARCKRTDSVS*
Ga0066837_103452741	3300005593	Marine	IYFFIAGPNGGWFESERTIYETKEICIEYRDFFNSMPKPGTLLARCKRIENTH*
Ga0066833_100856851	3300005595	Marine	MKWVLIIYFFIAGPNGGWHESERTVYETNEICIEYKDFFNSMPKPGTLMARCKRIENTH*
Ga0066841_1000052410	3300005599	Marine	SITIMHWVLIIYFFIGGPGGGWHESERTYFKTKEECIEHRDFFNEMPKPGTLMARCKRADTVS*
Ga0066853_100162634	3300005603	Marine	FFISGPNGGWTETDRTFYQTKQQCIEYKDFFNDLPKPGTLMARCKRVDSVSK*
Ga0066850_101050872	3300005605	Marine	MKWALIIYFFIAGPNGGWFESERTIYETKEICIEYRDFFNSMPKPGTLLARCERIENTH*
Ga0075108_101413561	3300005913	Saline Lake	MQWVLIIYFFIGGPGGGWFESQRTVYETEEICIEYRDVFNSMPKPGTLMARCERDDPASRG*
Ga0082019_10511261	3300006093	Marine	MKWVLIIYFFIGGPDGGWHEGERAFYETKQQCIEDRDFFNDLPKPGTLMARCKRADSVSK
Ga0066836_104757422	3300006166	Marine	MKWILIIYFFTSGPNGGWTETDRTFYHTKQECIETMDFFNALPKPGTLMARCKRADSVS*
Ga0068470_12143231	3300006308	Marine	MKWVLIIYFFIGGPDGGWTETDRTFYDTKQQCIEYRDFFNALPKPGTLMARCKRVNSVSQ
Ga0068471_12134342	3300006310	Marine	MKWALIIYFFTAGPGGGWHEGERTFYETKEICIEYRDFFNNMPKPGTLMARCKRADSVSK
Ga0068471_12154552	3300006310	Marine	MKWVLIIYFFIGGPGGGWHEGERTFYETKQECIEHRDFFNDLPKPGTLMARCKRTDSIS*
Ga0098035_10606352	3300006738	Marine	MKWVLIIYFFIAGPNGGWFESERTIYETKEICIEYRDFFNSMPKPGTLLARCERIENTH*
Ga0098035_12010511	3300006738	Marine	IYFFIGGPDGGWHEGERAFYETKQQCIEDRDFFNDLPKPETLMARCKRADSVSK*
Ga0098044_11384561	3300006754	Marine	KWVLIIYFFISGPNGGWTETDRTFYQTKQQCIEYKDFFNDLPKPGTLMARCKRVDSVSK*
Ga0066372_104333922	3300006902	Marine	MKWILIIYFFTGGPNGGWTETDRTFYHTKQQCIEYRDFFNALPKPGTLMARCKRADSVS*
Ga0066367_14101983	3300007291	Marine	MKVWLLIIYIFTVGPNGGWTEVDRTLFYTKQQCMESMDYFNAIPMPGTLTARCKRADSV
Ga0105012_10671395	3300007509	Marine	MKWVLIIYFFISGPNGGWTETDRTFYQTKQQCIEYRDFFNALPKPGTLMSRCKRVDSVSKLNF*
Ga0114996_107954222	3300009173	Marine	MKWVLIIYFFIAGPGGGWQESKRTLYATKEVCIETMDFFNNMPKPGTLMARCRSADSLI*
Ga0118722_12073481	3300009376	Marine	FISGPNGGWTETDRTFYQTKQQCIEYRDFFNALPKPGTLMSRCKRVDSVSKLNF*
Ga0115002_105588393	3300009706	Marine	MKWALIIYFFIAGPGGGWKESERTVYETKQECVEYRDFINNMPKPGTLTARCKRADSVG*
Ga0114999_103662921	3300009786	Marine	MKWILIIYFFIGGPSGGWFESERTVYETKQECIEYRDFFNTMPKPGTLLARCERADSIS*
Ga0133547_118804531	3300010883	Marine	IIYFFIAGPGGGWHEGERTFYETKQECIETMDFFNNMPKPGTLMARCRSADSLI*
Ga0181432_13110641	3300017775	Seawater	MKWILIIYFFITGPGGGWHEGERTFYETKQQCIEHRDFFNDLPKPGTLMARCKRTDSIS
Ga0211537_10468322	3300020262	Marine	MKWVLIIYFFIGGPDGGWHEGERTIYETKEICIEYRDFFNSMPKPGTLMARCKRADSVSK
Ga0211531_11804562	3300020361	Marine	FISGPNGGWTETDRTFYQTKQQCIEYRDFFNALPKPGTLMARCKRADSVSK
Ga0211646_102890961	3300020383	Marine	MKWVLIIYFFISGPNGGWTETDRTFYQTKQQCIEYKDFFNDLPKPGTLMARCKRADSVSK
Ga0211680_102986902	3300020389	Marine	MKWALIIYFFIAGPGGGWKESERTVYETKQECVEYRDFFNNMPKPGTLTARCKRADSVSK
Ga0211623_101417482	3300020399	Marine	MKVWLLIIYIFTVGPNGGWTEVDRTLFYTKQQCMESMDYFNAIPMPGTLTARCKRADSVS
Ga0211642_100099174	3300020449	Marine	MKWVLIIYFFISGPNGGWTETDRTFYQTKQQCIEYRDFFNALPKPGTLMARCKRADSVSK
Ga0206686_10823882	3300021065	Seawater	MKWALIIYFFTAGPSGGWHEGERTFYETKQECIEYRDFFNDLPKPGTLMARCKRADSVS
Ga0206683_103348052	3300021087	Seawater	MKWALIIYFFIGGPDGGWTETNRTFYDTKQQCIEYKDFFNNLPKPGTLMARCERADSVGE
Ga0206679_100891362	3300021089	Seawater	MKWLLIIYFFIGGPDGGWYEGERTFYETKQECIEYRDFFNNMPKPGTLMARCKRADPVSK
Ga0206682_100578833	3300021185	Seawater	MKWALIIYFFIAGPGGGWHEGERTFYKTKQECIETMDFFNNMPKPGTLMARCKRADSIS
Ga0206685_102261483	3300021442	Seawater	MKWVLIIYFFIGGPGGGWHEGERTFYETKQECIEHRDFFNDLPKPGTLMARCKRTDSIS
Ga0226832_105432011	3300021791	Hydrothermal Vent Fluids	MKWALIIYFFTTGPGGGWHEGERTFYETKEICIEYRDFFNNMPKPGTLMARCKRTDPVSK
Ga0187833_102066543	3300022225	Seawater	MKWVLIIYFFIGGPDGGWFESERTIYETKEICIEYRDFFNSMPKPGTLLARCKRIENTH
Ga0187833_103113192	3300022225	Seawater	MKWALIIYFFTAGPDGGWHEGERTFYQTKEICVEYRDFFNNMPKPGTLMAKCKMADGYARYNNINSN
Ga0187827_100363981	3300022227	Seawater	VLIIYFFISGPNGGWTETDRTFYQTKQQCIEYRDFFNALPKPGTLMARCKRADSVSK
Ga0187827_100675821	3300022227	Seawater	IIYFFISGPNGGWTETDRTFYQTKQQCIEYKDFFNDLPKPGTLMARCKRVDSVSK
Ga0187827_102214473	3300022227	Seawater	MKWVLIIYFFIAGPNGGWHESERTVYETNEICIEYKDFFNSMPKPGTLMARCKRVDSVSK
Ga0222711_10027877	3300022837	Saline Water	MQWVLIIYFFIGGPGGGWFESQRTVYETEEICIEYRDVFNSMPKPGTLMARCERDDPASK
Ga0222668_10112755	3300022865	Saline Water	MQWVLIIYFFIGGPGGGWFESQRTVYETEEICIEYRDVFNSMPKPGTLMARCERDDPASR
Ga0222629_10673093	3300022867	Saline Water	LIIYFFIGGPGGGWFESQRTVYETEEICIEYRDVFNSMPKPGTLMARCERDDPASRG
Ga0208668_10090725	3300025078	Marine	MKWVLIIYFFIGGPDGGWFESERTIYETKEICIEYRDFFNSMPKPGTLLARCERIENTH
Ga0209349_10435872	3300025112	Marine	MKWVLIIYFFISGPNGGWTETDRTFYQTKQQCIEYKDFFNDLPKPGTLMARCKRVDSVSK
Ga0209349_11309171	3300025112	Marine	MKWALIIYFFIAGPGGGWHESERTYFKTKKECIEHRDFFNTLPKPGTLMARCKRTDSVS
Ga0209128_10972564	3300025131	Marine	MKWALIIYFFIAGPNGGWFESERTIYETKEICIEYRDFFNSMPKPGTLMARCKRIEN
Ga0209128_12292182	3300025131	Marine	IYFFIAGPNGGWFESERTIYETKEICIEYRDFFNSMPKPGTLLARCKRIENTH
Ga0209756_11437321	3300025141	Marine	MKWVLIIYFFIAGPNGGWHESERTVYETNEICIEYKDFFNSMPKPGTLMARCKRIENTH
Ga0209756_11813733	3300025141	Marine	MKWILIIYFFTAGPGGGWYESEKIIYPTKQECIEYRDFFNEMPKPGTLMARCKRADSVS
Ga0208276_10032551	3300026166	Marine	SSITIMHWVLIIYFFIGGPGGGWHESERTYFKTKEECIEHRDFFNEMPKPGTLMARCKRADTVS
Ga0208521_11541152	3300026204	Marine	MKWVLIIYFFIAGPNGGWFESERTIYETKEICIEYRDFFNSMPKPGTLMARCKRVDSVSK
Ga0207989_10672801	3300026209	Marine	MKWVLIIYFFIAGPNGGWHESERTVYETNEICIEYKDFFNSMPKPGTLMARCKRV
Ga0208642_10548352	3300026210	Marine	MKWVLIIYFFIAGPNGGWHESERTVYETNEICIEYKDFFNSMPKPGTLLARCKRIENTH
Ga0208132_10532842	3300026211	Marine	MKWVLIIYFFISGPNGGWFESERTIYETKEICIEYRDFFNSMPKPGTLLARCKRIENTH
Ga0208409_10639451	3300026212	Marine	MKWVLIIYFFIGGPNGGWTETDRTFYDTKQQCIEYKDFFNDLPKPGTLMARCKRADSVSK
Ga0208522_11092092	3300026254	Marine	MKWILIIYFFTSGPNGGWTETDRTFYHTKQECIETMDFFNALPKPGTLMARCKRADSVS
Ga0208407_11367273	3300026257	Marine	MHWVLIIYFFIGGPGGGWHESERTYFKTKEECIEHRDFFNEMPKPGTLMARCKRADTVS
Ga0208896_10813711	3300026259	Marine	MKWVLIIYFFIAGPNGGWHESERTVYETNEICIEYKDFFNSMPKPGTLMARCKR
Ga0208524_10172211	3300026261	Marine	FFISGPNGGWTETDRTFYQTKQQCIEYKDFFNDLPKPGTLMARCKRVDSVSK
Ga0208278_10074364	3300026267	Marine	MKWVLIIYFFIGGPNGGWTETDRTFYDTKQQCIEYKDFFNDLPKPGTLMARCKRVDSVSK
Ga0208641_100095723	3300026268	Marine	LIIYFFISGPNGGWTETDRTFYQTKQQCIEYKDFFNDLPKPGTLMARCKRVDSVSK
Ga0208641_10961064	3300026268	Marine	MKWALIIYFFIAGPNGGWFESERTIYETKEICIEYRDFFNSMPKPGTLLARCKRIEN
Ga0208766_10635011	3300026269	Marine	KWILIIYFFTSGPNGGWTETDRTFYHTKQECIETMDFFNALPKPGTLMARCKRADSVS
Ga0209089_100926692	3300027838	Marine	MKWILIIYFFIGGPSGGWFESERTVYETKQECIEYRDFFNTMPKPGTLLARCERADSIS
Ga0209089_102579731	3300027838	Marine	MKWLLIIYFFIGGPNGGWFESERTVYETKEMCIEYRDFFNTMPKPGTLLARCERA
Ga0209501_104001133	3300027844	Marine	MKWLLIIYFFIGGPNGGWFESERTVYETKEMCIEYRDFFNTMPKPGTLLARCERADSIS
Ga0209402_102431791	3300027847	Marine	MKWILIIYFFIGGPSGGWFESERTVYETKQECIEYRDFFNTMPKPGTLLARCERA
Ga0257108_10161333	3300028190	Marine	MKWVLIIYFFIGGPDGGWFESKKQYWTYYESKEKCIEYAEWFNALPKPGSLTARCKQE
Ga0257108_10421732	3300028190	Marine	MKWVLIIYFFIAGPGGGWYEGERTIYETKEMCIEYRDFFNSMPKPGTLLAKCKRADAVG
Ga0257107_10858882	3300028192	Marine	MKVWLLIIYFFTVGPNGGWIEVDRTLFYTKQQCMESMDYFNAIPMPGTLTARCKRADSVS
Ga0257111_11836402	3300028535	Marine	MKWVLIIYFFIAGPDGGWYEGQRTYYENKQQCIEYGDFFNNMPKPGTLMARCERADSIG
Ga0302132_100034359	3300031605	Marine	MKWVLIIYFFIGGPSGGWFESERNVYETKQECMETMDFFNNMPKPVTLLARCERADSISK
Ga0302132_100035073	3300031605	Marine	MKWVLIIYFFIAGPGGGWQESKRTLYATKEVCIETMDFFNNMPKPGTLLARCERADFVRW
Ga0302132_105077183	3300031605	Marine	MKWLLIIYFFIAGPNGGWYEGERTYYENKQQCIEYQDFFNNMPKPGTLMARCRSADSLI
Ga0302119_102594633	3300031606	Marine	MKWLLIIYFFIGGPDGGWFESERTVYETKEICIEYRDFFNSMPKPGTLMARCKRADSIS
Ga0315326_103550282	3300031775	Seawater	MKWALIIYFFVTGPGGGWHEGERTFYETKQQCIEHRDFFNDLPKPGTLMARCKRTDSISK
Ga0310121_103149543	3300031801	Marine	MKWALIIYFFIAGPGGGWHEGERTFYETKQECIETMDFFNNMPKPGTLMARCKRADSIS
Ga0310123_102576014	3300031802	Marine	MKWALIIYFFTAGPYGGWIEVDKTFYETKQQCIEYMDFFNTLPKPGTLIARCKRSDSVGE
Ga0310120_102192391	3300031803	Marine	MKWLLIIYFFIGGPDGGWFESERTVYETKEICIEYRDFFNSMPKPGTLLARCERAGSISK
Ga0310125_101408514	3300031811	Marine	MKWALIIYFFIAGPGGGWHESERNFYETKQECIETMDFFNNMPKPGTLMARCK
Ga0315318_107125582	3300031886	Seawater	MKWLLIIYFFIGGPDGGWYEGERTFYETKQECIEYRDFFNNMPKPGTLMARCKRADPVS
Ga0310344_115936703	3300032006	Seawater	MHWILIIYYFIAGPGGGWHESERIIYPTKQECIEYRDFFNEMPKPGTLMARCKRADTVS
Ga0315316_110381651	3300032011	Seawater	MKWILIIYFFITGPGGGWHEGERTFYETKQECVETRDFFNNMPKPGTLMARCKRADPISK
Ga0315327_109024012	3300032032	Seawater	FFIGGPGGGWHEGERTFYETKQECIEYRDFFNNMPKPGTLMARCKRADPVSK
Ga0315327_109294001	3300032032	Seawater	MKWALIIYFFIGGPGGGWHEGERTFYETKQECIEYRDFFNNMPKPGTLMARCKRADPVSK
Ga0315329_101454883	3300032048	Seawater	MKWVLIIYFFIGGPDGGWFESKEQYWTYYESKEQCIEYAEWFNALPKPGSLTARCKQK
Ga0315329_102495071	3300032048	Seawater	MKWVLIIYFFIGGPNGGWTETDRTFYDTKQQCIEYKDFFNNLPKPGTLMARCK
Ga0315329_103869773	3300032048	Seawater	MKWILIIYFFIGGPSGGWFESERTVYETKEMCIEYRDFFNSMPKPGTLLARCERADSIS
Ga0315329_105407172	3300032048	Seawater	MKWALIIYFFVTGPGGGWHEGERTFYETKQECIETMDFFNNMPKPGTLMARCKRADSIS
Ga0315315_110374151	3300032073	Seawater	MKWALIIYFFIAGPGGGWHESERTFYETKQECIEYRDFFNDMPKPGTLMARCKRADSIS
Ga0315333_100263842	3300032130	Seawater	MKWALIIYFFIGGPGGGWHEGERTFYETKQECIEHRDFFNDLPKPGTLMARCKRTDSIS
Ga0310345_112161862	3300032278	Seawater	VKWALIIYFFIAGPGGGWYESERTFYETKQECIETMVFFNNMPKPGTLTARCKRVETE
Ga0315334_100382247	3300032360	Seawater	MKWVLIIYFFIGGPNGGWTETDRTFYDTKQQCIEYKDFFNNLPKPGTLMARCKRADSVSK
Ga0315334_116326742	3300032360	Seawater	MKWLLIIYFFIGGPNGGWFESERTVYETKQECIEYRDFFNTMPKPGTLLARCERADSISK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087733

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences