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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F087710 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 110 |
| Average Sequence Length | 49 residues |
| Representative Sequence | MSFRTWCGAVACAVLIIFAPAARAQDWPNRSMLAVSTVSAGNAGDTIARI |
| Number of Associated Samples | 90 |
| Number of Associated Scaffolds | 110 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.91 % |
| % of genes from short scaffolds (< 2000 bps) | 0.00 % |
| Associated GOLD sequencing projects | 87 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.41 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (99.091 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.000 % of family members) |
| Environment Ontology (ENVO) | Unclassified (49.091 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (45.455 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 60.26% β-sheet: 0.00% Coil/Unstructured: 39.74% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.41 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 110 Family Scaffolds |
|---|---|---|
| PF03401 | TctC | 10.91 |
| PF00582 | Usp | 3.64 |
| PF04392 | ABC_sub_bind | 2.73 |
| PF00072 | Response_reg | 1.82 |
| PF00535 | Glycos_transf_2 | 1.82 |
| PF00313 | CSD | 1.82 |
| PF14534 | DUF4440 | 1.82 |
| PF06983 | 3-dmu-9_3-mt | 0.91 |
| PF03069 | FmdA_AmdA | 0.91 |
| PF04055 | Radical_SAM | 0.91 |
| PF04545 | Sigma70_r4 | 0.91 |
| PF00296 | Bac_luciferase | 0.91 |
| PF13641 | Glyco_tranf_2_3 | 0.91 |
| PF07484 | Collar | 0.91 |
| PF01027 | Bax1-I | 0.91 |
| PF00486 | Trans_reg_C | 0.91 |
| PF00497 | SBP_bac_3 | 0.91 |
| COG ID | Name | Functional Category | % Frequency in 110 Family Scaffolds |
|---|---|---|---|
| COG3181 | Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC | Energy production and conversion [C] | 10.91 |
| COG2984 | ABC-type uncharacterized transport system, periplasmic component | General function prediction only [R] | 2.73 |
| COG2141 | Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase) | Coenzyme transport and metabolism [H] | 0.91 |
| COG2421 | Acetamidase/formamidase | Energy production and conversion [C] | 0.91 |
| COG2764 | Zn-dependent glyoxalase, PhnB family | Energy production and conversion [C] | 0.91 |
| COG3865 | Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase | General function prediction only [R] | 0.91 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 99.09 % |
| All Organisms | root | All Organisms | 0.91 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300006172|Ga0075018_10008259 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 3788 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 40.00% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 14.55% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 10.00% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 5.45% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 3.64% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 3.64% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 2.73% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 2.73% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 2.73% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.82% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 1.82% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 1.82% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 0.91% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.91% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.91% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 0.91% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 0.91% |
| Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 0.91% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.91% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.91% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.91% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.91% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000597 | Forest soil microbial communities from Amazon forest - 2010 replicate II A1 | Environmental | Open in IMG/M |
| 3300000655 | Forest soil microbial communities from Amazon forest - 2010 replicate II A100 | Environmental | Open in IMG/M |
| 3300000793 | Forest soil microbial communities from Amazon forest - 2010 replicate II A001 | Environmental | Open in IMG/M |
| 3300000837 | Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100 | Environmental | Open in IMG/M |
| 3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300001661 | Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly) | Environmental | Open in IMG/M |
| 3300002910 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm | Environmental | Open in IMG/M |
| 3300002917 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm | Environmental | Open in IMG/M |
| 3300003911 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004268 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio | Environmental | Open in IMG/M |
| 3300004633 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio | Environmental | Open in IMG/M |
| 3300005181 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300006172 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014 | Environmental | Open in IMG/M |
| 3300006603 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
| 3300006953 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300010325 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
| 3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
| 3300012204 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG | Environmental | Open in IMG/M |
| 3300012211 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG | Environmental | Open in IMG/M |
| 3300012918 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012971 | Tropical forest soil microbial communities from Panama - MetaG Plot_1 | Environmental | Open in IMG/M |
| 3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
| 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300016294 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 | Environmental | Open in IMG/M |
| 3300016357 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 | Environmental | Open in IMG/M |
| 3300016422 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 | Environmental | Open in IMG/M |
| 3300016445 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 | Environmental | Open in IMG/M |
| 3300018468 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111 | Environmental | Open in IMG/M |
| 3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300021968 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1 | Environmental | Open in IMG/M |
| 3300027874 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes) | Environmental | Open in IMG/M |
| 3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300031170 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S | Environmental | Open in IMG/M |
| 3300031543 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20 | Environmental | Open in IMG/M |
| 3300031561 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26 | Environmental | Open in IMG/M |
| 3300031572 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19 | Environmental | Open in IMG/M |
| 3300031573 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111 | Environmental | Open in IMG/M |
| 3300031640 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23 | Environmental | Open in IMG/M |
| 3300031680 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22 | Environmental | Open in IMG/M |
| 3300031681 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20 | Environmental | Open in IMG/M |
| 3300031763 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29 | Environmental | Open in IMG/M |
| 3300031764 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27 | Environmental | Open in IMG/M |
| 3300031768 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22 | Environmental | Open in IMG/M |
| 3300031770 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17 | Environmental | Open in IMG/M |
| 3300031771 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19 | Environmental | Open in IMG/M |
| 3300031793 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21 | Environmental | Open in IMG/M |
| 3300031795 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19 | Environmental | Open in IMG/M |
| 3300031799 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21 | Environmental | Open in IMG/M |
| 3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
| 3300031831 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20 | Environmental | Open in IMG/M |
| 3300031835 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21 | Environmental | Open in IMG/M |
| 3300031845 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18 | Environmental | Open in IMG/M |
| 3300031860 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25 | Environmental | Open in IMG/M |
| 3300031894 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18 | Environmental | Open in IMG/M |
| 3300031897 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16 | Environmental | Open in IMG/M |
| 3300031910 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2) | Environmental | Open in IMG/M |
| 3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
| 3300031941 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080 | Environmental | Open in IMG/M |
| 3300031942 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176 | Environmental | Open in IMG/M |
| 3300031947 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H | Environmental | Open in IMG/M |
| 3300031954 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2) | Environmental | Open in IMG/M |
| 3300031959 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24 | Environmental | Open in IMG/M |
| 3300031981 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25 | Environmental | Open in IMG/M |
| 3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
| 3300032008 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18 | Environmental | Open in IMG/M |
| 3300032009 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19 | Environmental | Open in IMG/M |
| 3300032010 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22 | Environmental | Open in IMG/M |
| 3300032035 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170 | Environmental | Open in IMG/M |
| 3300032042 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26 | Environmental | Open in IMG/M |
| 3300032052 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19 | Environmental | Open in IMG/M |
| 3300032054 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23 | Environmental | Open in IMG/M |
| 3300032059 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27 | Environmental | Open in IMG/M |
| 3300032067 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22 | Environmental | Open in IMG/M |
| 3300032091 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25 | Environmental | Open in IMG/M |
| 3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
| 3300033289 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108 | Environmental | Open in IMG/M |
| 3300034151 | Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17 | Environmental | Open in IMG/M |
| Geographical Distribution | |
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| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| AF_2010_repII_A1DRAFT_100444221 | 3300000597 | Forest Soil | MSFRTWCGAVACAVLMFPAPAARAQDWPNRSMLAVSTVS |
| AF_2010_repII_A100DRAFT_10052751 | 3300000655 | Forest Soil | MSFRTACGAAACAVLVTLAPAARAQDWPNRMVLTISPLTAGN |
| AF_2010_repII_A001DRAFT_101349242 | 3300000793 | Forest Soil | MSFRTLCTAAACAAVMAVAPAALAQDWPSRSILAIST |
| AP72_2010_repI_A100DRAFT_10051341 | 3300000837 | Forest Soil | MSFRTWCGAVACAVLIFFAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIVLDQ |
| JGI1027J12803_1060204541 | 3300000955 | Soil | MSIRNFCGAIACAVLITLAPAALAQDWPNRSMLVISTVSAGNAGDTIARIVLDQ |
| JGI12053J15887_1000085614 | 3300001661 | Forest Soil | MTSFRTWCGAVTGAVLFVLNSTAVAQDWPTRSMLVVSAVTAGNAGDIVARIVLE |
| JGI25615J43890_10162801 | 3300002910 | Grasslands Soil | MSFRSARGSFRSACGATACAILITVAPAALAQDWPNRSIVAVSTVTAGNAADTIARVVLD |
| JGI25616J43925_100672534 | 3300002917 | Grasslands Soil | MSFRSARGSFRSACGATACAILITVAPAALAQDWPNRSIV |
| JGI25405J52794_101145991 | 3300003911 | Tabebuia Heterophylla Rhizosphere | MTPLRTWCGAVTAAVLFVLNSAAIAQDWPSRSMLAVSAVSAGNAGDIVARIV |
| Ga0062590_1029091301 | 3300004157 | Soil | MPSFRTWYGAATGAALFVLSSAAVAQDWPSRSMLVVSAVSAGNAGD |
| Ga0066398_102238242 | 3300004268 | Tropical Forest Soil | MSFRTWCGAVACAVLMFFAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIVLDQVSKQ |
| Ga0066395_100442961 | 3300004633 | Tropical Forest Soil | MSFGTWCGATACAVVVTLAPAARAQDWPNRSILAVSTVSAGNAGDTI |
| Ga0066395_101671573 | 3300004633 | Tropical Forest Soil | MSFRSACTAMAGAILITFAPAALAQDWPNRSIVAVSTVSAGN |
| Ga0066395_105306031 | 3300004633 | Tropical Forest Soil | MSFRTWCGAVTGVVLFVLNSAAMALDWPTRSMLVVSTVTAGNAGDIVARIVLEQVSKQI |
| Ga0066678_101669991 | 3300005181 | Soil | MSLRSACGAMACAVLIALAPAALAQDWPNRSIVAVSTVSAGNAS |
| Ga0066388_1007128931 | 3300005332 | Tropical Forest Soil | MSFRTWCGAVACAVLIIFAPAARAQDWPNRSMLAVSTVSA |
| Ga0066388_1084609201 | 3300005332 | Tropical Forest Soil | MSFRTACGAAACAVLVTLAPAARAQDWPNRMVLTISPLTAGNAADTVARIVL |
| Ga0066905_1001234241 | 3300005713 | Tropical Forest Soil | MTPFRTWCGAVTATALFVLSSAAIAQDWPSRSMLAVSAVSAGNAGDIVARIVLEQVSKQ |
| Ga0066905_1001328881 | 3300005713 | Tropical Forest Soil | MTLLRTWCSAVPTAVLLVLNSAAIAQDWPSRSMLAVSAVSAGNAGDIVARIVLEQVS |
| Ga0066905_1003756753 | 3300005713 | Tropical Forest Soil | MTPLRTGCSAVTAAVLLVLNSAAIAQDWPSRSMLAVSAVSAGNAGDIVARIVLEQVS |
| Ga0066905_1006998692 | 3300005713 | Tropical Forest Soil | MSFRTWCGATACAVLMTLAPAARAQDWPNRSILAVSTVSAGNAGDTIARIVLDQVS |
| Ga0066905_1010424031 | 3300005713 | Tropical Forest Soil | MSFRTWCGAVACAVLIIFAPAARAQDWPNRSMLAVSTVSAGNAGDTIARI |
| Ga0066905_1012254482 | 3300005713 | Tropical Forest Soil | MTPLRTWCGAVTAAVLLVLNSPATAQEWPARSMLAVSAVSAGNAGDMVARIVLEQVSKQIGQS |
| Ga0066903_1026045981 | 3300005764 | Tropical Forest Soil | MSLRTWCGAVACAVLMIFAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIVLDQ |
| Ga0066903_1030481903 | 3300005764 | Tropical Forest Soil | MTPLRTGCSAVTAAVLLVLNSAAIAQDWPSRSMLAVSAVSAGNAGDIVARIV |
| Ga0066903_1052183371 | 3300005764 | Tropical Forest Soil | MTPLRTGCGAVTAAVLLVLNSAAIAQDWPSRSMLAVSAVSAGNAGDIVARIVLEQ |
| Ga0075018_100082591 | 3300006172 | Watersheds | MSLRMSCGAIACAAFITLAPAALAQDWPNRSILAVSTVSAGNAGDTIA |
| Ga0074064_114966151 | 3300006603 | Soil | MSFRFACGAMASAILVTLAPAALAQDWPNRSIVAVSTVSA |
| Ga0075429_1008786822 | 3300006880 | Populus Rhizosphere | MTSLRRWCGAVTAAVLFVLNSAAIAQDWPSRSMLAVSAVSAGN |
| Ga0074063_101146701 | 3300006953 | Soil | MSLRMSCGAIACAAFITLAPAALAQDWPNRSMLAVSTVSAGNAGDTIARIVLDQVS |
| Ga0111538_135256411 | 3300009156 | Populus Rhizosphere | MPFRTACGAAACAVLVTLAPAARAQDWPNRMVLTI |
| Ga0105249_129770122 | 3300009553 | Switchgrass Rhizosphere | MSFRTACAAAACAMVITLAPAARAQDWPNRSVLTISPLTAG |
| Ga0134064_103635571 | 3300010325 | Grasslands Soil | MSFRTACSAAACAVLVTLAPAARAQDWPNRMVLTISPLTAGNAADTVARIVL |
| Ga0126370_106449141 | 3300010358 | Tropical Forest Soil | MSLRTSCGALACASFITLAPAALAQDWPNRSLLAVSTVSAGNAGDTIARIVLDQV |
| Ga0126372_130504922 | 3300010360 | Tropical Forest Soil | MSLRTSCGALACAGFITLAPAALAQDWPNRSMLAVS |
| Ga0126377_128424301 | 3300010362 | Tropical Forest Soil | MSFRTACGVTACAVLVALALGALAQDWPNRSVLTISPLTAGNAADT |
| Ga0126377_129436071 | 3300010362 | Tropical Forest Soil | MSFRSARGVIAGVVLATLAPAALAQSWPNRSIVAVSTVSAGNAADTVARI |
| Ga0137374_103005643 | 3300012204 | Vadose Zone Soil | MTSFRTWCGAVTAAALFVLNSAAAAQDWPTRSILVVSAVSAGNAGDIIARIVLE |
| Ga0137377_103939331 | 3300012211 | Vadose Zone Soil | MSLRIPCAAAAAAVITLTPAALAQDWPNRSIVAVSTVS |
| Ga0137396_100805304 | 3300012918 | Vadose Zone Soil | MSLRMSCGAIACAAFITLAPAALAQDWPNRSILAVSTVSAGNAGDTIARIVLD |
| Ga0164299_100334574 | 3300012958 | Soil | MSFRTACAAAACAMVITLAPAARAQDWPNRSVLTISPLTAGNAADTV |
| Ga0126369_103319215 | 3300012971 | Tropical Forest Soil | MSFGTWCGATACAVVVTLAPAARAQDWPNRSILAVSTVSAGNAGDTIARIVLDQVS |
| Ga0164304_113227131 | 3300012986 | Soil | MSFRTACAAAACAMVITLAPAARAQDWPNRSVLTISPLTAGNAADTVAR |
| Ga0163162_125557721 | 3300013306 | Switchgrass Rhizosphere | MSFRTACAAAACAMVITLAPAARAQDWPNRSVLTISPL |
| Ga0132258_128142551 | 3300015371 | Arabidopsis Rhizosphere | MPFRTACGAAACAVLVTLAPAARAQDWPNRMVLTISPLTAGNAADT |
| Ga0132256_1014502332 | 3300015372 | Arabidopsis Rhizosphere | MTPLRTWCGAVTAAVLLVLNSPATAQDWPARSMLAVSAVSAGNAGDMVARIVLEQ |
| Ga0132256_1035666901 | 3300015372 | Arabidopsis Rhizosphere | MTSLRTWCRAIPAAVLLVLNSAAIAQDWPNRSMVAVSAVSAGNAGDIVARIVLE |
| Ga0182041_111904172 | 3300016294 | Soil | MSLRMSCGAIACAGFITLAPAALAQDWPNRSMLAV |
| Ga0182032_106566642 | 3300016357 | Soil | MSLRMSCGAIACAGFITLAPAALAQDWPNRSMLAVSTVSAGNAGDTI |
| Ga0182039_105350983 | 3300016422 | Soil | MSLRTSCGALACAGFITLAPAALAQDWPNRSLLAVSTVSAGNAGDTIARIVLDQVSK |
| Ga0182038_120081371 | 3300016445 | Soil | MSFRTWCGAVTGAVLFVLNSAAMALDWPTRSMLVVSTVTA |
| Ga0066662_115452062 | 3300018468 | Grasslands Soil | MSFRTWCGATACAVVVTLAPAARAQDWPNRSILAVSTVSAG |
| Ga0210406_106707792 | 3300021168 | Soil | MSFRSARGSLHSACAAMAGAVLITLAPAALAQDWPNRSIVAVSTVTAGNA |
| Ga0126371_120437191 | 3300021560 | Tropical Forest Soil | MSLRTSCGALACAGFITLAPAALAQDWPNRSMLAV |
| Ga0193698_10420822 | 3300021968 | Soil | MSFRFACGAMAGAILVTLAPAALAQDWPNRSIVAVSTVSAGNAADTV |
| Ga0209465_100312651 | 3300027874 | Tropical Forest Soil | MSFRTWCGATACAVLMTLAPAARAQDWPNRSILAVSTVSAG |
| Ga0209382_119028951 | 3300027909 | Populus Rhizosphere | MTSLRTWCGAVTAAVLLVLNSAAIAQDWPSRSMLAVSAVSAGNAGDIVARIVLEQVS |
| Ga0307498_103113922 | 3300031170 | Soil | MSFRFACGAMASAILVTLAPAALAQDWPNRSIVAVSTVSAGNAADTVARIV |
| Ga0318516_106668922 | 3300031543 | Soil | MSFRTWCGAMACTVLMFPAPAARAQDWPNRSMLAVSTVSAGNAG |
| Ga0318528_104428941 | 3300031561 | Soil | MSLRTSCGALACAGFITLAPAALAQDWPNRSMLAVSTVSAGNAADTIARVVLD |
| Ga0318515_100210325 | 3300031572 | Soil | MSFRTWCGAMACAVLMFPAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIVLD |
| Ga0310915_104130603 | 3300031573 | Soil | MSFRTWCGAMACTVLMFPAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIVLDQVSKQ |
| Ga0318555_104298722 | 3300031640 | Soil | MSLRTSCGALACAGFITLAPAALAQDWPNRSMLAVSTVSAGNAA |
| Ga0318574_100790174 | 3300031680 | Soil | MSLRTSCGALACAGFITLAPAALAQDWPNRSLLAVSTVSAGNAGDTIARIVLDQ |
| Ga0318574_102251791 | 3300031680 | Soil | MSFRTWCGAVTGVVLFVLNSAAMALDWPTRSMLVVSTVTAGNAGDIVARIVLEQVA |
| Ga0318572_101013334 | 3300031681 | Soil | MSFRTWCGAMACAVLMFPAPAARAQDWPNRSMLAVST |
| Ga0318537_103985921 | 3300031763 | Soil | MSFRTWCGAMACAVLMFPAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIVLDQVSKQ |
| Ga0318535_105007832 | 3300031764 | Soil | MSFRTWCGAVTGVVLFVLNSAAMALDWPTRSMLVVSTVTAGNAGDIVARIVLEQVAKQIGQSF |
| Ga0318509_104541441 | 3300031768 | Soil | MSLRTSCGALACAGFITLAPAALAQDWPNRSMLAVSTVSAGNAGDTIARVVLD |
| Ga0318521_101227133 | 3300031770 | Soil | MSLRTWCGAVACAVLMIFAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIVLDQVSKQ |
| Ga0318546_104127241 | 3300031771 | Soil | MSFRTWCGAMACAVLMFPAPAARAQEWPNRSMLAVSTVSAGNAGDTIARIVLDQVSK |
| Ga0318548_102166241 | 3300031793 | Soil | MSFRTWCGAVTGVVLFVLNSAAMALDWPTRSMLVVSTVTAGNAGDIVARIVLEQVAKQIG |
| Ga0318557_101457991 | 3300031795 | Soil | MSLRTWCGAVACAVLMIFAPAARAQDWPNRSMLAVSTVSAG |
| Ga0318565_100860033 | 3300031799 | Soil | MSFRTWCGATACAVLMTLAPAARAQDWPNRSILAVST |
| Ga0307473_106340131 | 3300031820 | Hardwood Forest Soil | MSFRTACAAAACAMVITLAPAARAQDWPNRSVLTISPLTAGNAADTVARIVL |
| Ga0318564_100817421 | 3300031831 | Soil | MSLRTWCGAVACAVLMIFAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIV |
| Ga0318517_102321062 | 3300031835 | Soil | MSLRMSYGAIACAGFITLAPAALAQDWPNRSMLAVSTVSAGNAGDTI |
| Ga0318511_105107741 | 3300031845 | Soil | MSLRTSCGALACAGFITLAPAALAQDWPNRSMLAVSTVSAGNAGDTIARVVLDQVSK |
| Ga0318495_100088577 | 3300031860 | Soil | MSFRTWCGAMAWAVLIIFAPAARAQDWPNRSMLAVSTVSAGNAGDTIAR |
| Ga0318522_100998553 | 3300031894 | Soil | MSFRTWCGAMACAVLMFPAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIVLDQ |
| Ga0318520_110673922 | 3300031897 | Soil | MSLRTSCGALACAGFIALAPAALAQDWPNRSLLTVLTAS |
| Ga0306923_115133252 | 3300031910 | Soil | MSLRTSCGALACAGFITLAPAALAQDWPNRSMLAVSTV |
| Ga0306923_124102171 | 3300031910 | Soil | MSLRTSCGALACAGFIALAPAALAQDWPNRSLLAVSTVSAGNAGDTIARIVLDQVS |
| Ga0306921_111238291 | 3300031912 | Soil | MSLRTSCGALACAGFIALAPAALAQDWPNRSLLAVSTVSAGNAGDTIARIVL |
| Ga0306921_126833991 | 3300031912 | Soil | MSFRTWCGAMACAVLMIFAPAARAQDWPNRSMLAVSTV |
| Ga0310912_112294371 | 3300031941 | Soil | MSLRMSCGAIACAGFITLAPAALAQDWPNRSMLAVSTVSAGNAGDTIARIVLDQ |
| Ga0310916_106319132 | 3300031942 | Soil | MSFRTWCGATACAVLMTLAPAARAQDWPNRSILAVS |
| Ga0310916_113041961 | 3300031942 | Soil | MSLRMSYGAIACAGFITLAPAALAQDWPNRSMLAVSTVSAGNAGDTIARIV |
| Ga0310909_113635891 | 3300031947 | Soil | MSLRTSCGALACAGFIALAPAALAQDWPNRSLLAVSTVSAGNAGDTIARI |
| Ga0306926_120669451 | 3300031954 | Soil | MSFRTWCGAMACAVLMFPAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIVLDQVSKQI |
| Ga0318530_100589331 | 3300031959 | Soil | MSLRTWCGAVACAVLMIFAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIVLD |
| Ga0318531_101846853 | 3300031981 | Soil | MSFRTWCGAMACAVLMFPAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIVLDQVSK |
| Ga0318531_101902881 | 3300031981 | Soil | MSFRTWCGAVTGVVLFVLNSAAMALDWPTRSMLVVSTVTAGNAGD |
| Ga0306922_103739043 | 3300032001 | Soil | MSLRTSCGALACAGFITLAPAALAQDWPNRSMLAVSTVSA |
| Ga0318562_104358082 | 3300032008 | Soil | MSFRTWCGATTCAVLITLAPAARAQDWPNRSILAISTVSAGNAGDTIARIVLD |
| Ga0318563_103576932 | 3300032009 | Soil | MSLRTSCGALACAGFITLAPAALAQDWPNRSMLAVSTVSAGNAG |
| Ga0318569_106216901 | 3300032010 | Soil | MSLRTSCGALACAGFITLAPAALAQDWPNRSMLAVSTVS |
| Ga0310911_100819064 | 3300032035 | Soil | MSFRTWCGAMACAVLMFPAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIV |
| Ga0318545_100207564 | 3300032042 | Soil | MSFRTWCGAMACTVLMFPAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIVLDQVSKQI |
| Ga0318506_103054222 | 3300032052 | Soil | MSLRTSCGALACAGFITLAPAALAQDWPNRSMLAVSTVSAGNAGDTIARVVLDQV |
| Ga0318570_101910761 | 3300032054 | Soil | MSFRTWCGAMACAVLMFPAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIVLDQE |
| Ga0318533_100907904 | 3300032059 | Soil | MSLRTSCGALACAGFITLAPAALAQDWPNRSLLAVSTVSAGNAGDTIARIVLD |
| Ga0318533_102570272 | 3300032059 | Soil | MSFRTWCGATACAVLMTLAPAARAQDWPNLSILAVSTVSAGNAG |
| Ga0318524_104814331 | 3300032067 | Soil | MSLRTSCGALACAGFITLAPAALAQDWPNRSLLAVSTVSAGNAGD |
| Ga0318577_101393632 | 3300032091 | Soil | MSFRTWCGAVTGVVLFVLNSAAMALDWPTRSMLVVSTVTAGNAGDIVARIVLEQ |
| Ga0306920_1033240952 | 3300032261 | Soil | MSLRMSCGAIACAAFITLAPAALAQDWPNRSILAVSTVSAGNAG |
| Ga0310914_102372371 | 3300033289 | Soil | MSFRTWCGAVTGAVLFVLNSAAMALDWPTRSMLVVSTVTAGNAGD |
| Ga0310914_112123241 | 3300033289 | Soil | MSLRTSCGALACAGFITLAPAALAQAWPNRSMLAVSTVS |
| Ga0310914_113835492 | 3300033289 | Soil | MSFRTWCGAMACTVLMFPAPAARAQDWPNRSMLAVSTVSAGNAGDTIARIVLDQ |
| Ga0364935_0336333_357_500 | 3300034151 | Sediment | MSFRFACGAMAGAILVTLAPATLARDWPNRSIVAVSTVSAQATPPIPL |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |