Metagenome / Metatranscriptome Family F087705

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087705
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	65 residues
Representative Sequence	MKKLSMIGIVGGAALLAAVPLSLQWSQVGPAVPLLTVSHANAQYYGPYRRHVRRVYRRAYRR
Number of Associated Samples	67
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.273 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.727 % of family members)
Environment Ontology (ENVO)	Unclassified (77.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.727 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 33.87% β-sheet: 0.00% Coil/Unstructured: 66.13%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF03401	TctC	4.55
PF04392	ABC_sub_bind	4.55
PF01594	AI-2E_transport	1.82
PF12071	DUF3551	1.82
PF00816	Histone_HNS	1.82
PF13356	Arm-DNA-bind_3	0.91
PF03713	DUF305	0.91
PF01527	HTH_Tnp_1	0.91
PF06411	HdeA	0.91
PF08546	ApbA_C	0.91
PF05598	DUF772	0.91
PF00005	ABC_tran	0.91
PF00753	Lactamase_B	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.55
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	4.55
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.82
COG2916	DNA-binding protein H-NS	Transcription [K]	1.82
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.91
COG3544	Uncharacterized conserved protein, DUF305 family	Function unknown [S]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.27 %
Unclassified	root	N/A	32.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.27 %
Unclassified	root	N/A	32.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.27 %
Unclassified	root	N/A	32.73 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	62.73 %
Unclassified	root	N/A	32.73 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	56.36 %
Unclassified	root	N/A	32.73 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.91 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	44.55 %
Unclassified	root	N/A	32.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.27 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.73 %
Unclassified	root	N/A	32.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.73 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.82 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.91 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.91 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.73 %
Unclassified	root	N/A	32.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.73 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.82 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.91 %
Corynebacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae	0.91 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.73 %
Unclassified	root	N/A	32.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.73 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.82 %
Variovorax paradoxus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	0.91 %
Corynebacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium	0.91 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.73 %
Unclassified	root	N/A	32.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.73 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.82 %
Corynebacterium ciconiae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium → Corynebacterium ciconiae	0.91 %
Variovorax paradoxus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	0.91 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1048426	Not Available	618	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10108939	Not Available	680	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10177387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300005148\|Ga0066819_1028010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium → Corynebacterium ciconiae	504	Open in IMG/M
3300005468\|Ga0070707_102347961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300005713\|Ga0066905_101039379	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300005764\|Ga0066903_103866218	Not Available	804	Open in IMG/M
3300005764\|Ga0066903_104141867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	776	Open in IMG/M
3300005764\|Ga0066903_106088078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300005764\|Ga0066903_109059445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300006172\|Ga0075018_10072853	All Organisms → cellular organisms → Bacteria → Proteobacteria	1476	Open in IMG/M
3300006606\|Ga0074062_11449749	Not Available	929	Open in IMG/M
3300006852\|Ga0075433_10808889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300010043\|Ga0126380_10877340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → Variovorax paradoxus	743	Open in IMG/M
3300010046\|Ga0126384_11838721	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300010048\|Ga0126373_12414888	Not Available	585	Open in IMG/M
3300010398\|Ga0126383_13365450	Not Available	522	Open in IMG/M
3300012955\|Ga0164298_10337034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	949	Open in IMG/M
3300016270\|Ga0182036_11104961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	657	Open in IMG/M
3300016270\|Ga0182036_11566342	Not Available	554	Open in IMG/M
3300016294\|Ga0182041_10454594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1101	Open in IMG/M
3300016294\|Ga0182041_10708880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	893	Open in IMG/M
3300016294\|Ga0182041_10939806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300016294\|Ga0182041_11045568	Not Available	740	Open in IMG/M
3300016319\|Ga0182033_10557177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	991	Open in IMG/M
3300016357\|Ga0182032_10457468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1042	Open in IMG/M
3300016357\|Ga0182032_11380679	Not Available	609	Open in IMG/M
3300016371\|Ga0182034_10408031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1116	Open in IMG/M
3300016404\|Ga0182037_10313081	All Organisms → cellular organisms → Bacteria → Proteobacteria	1266	Open in IMG/M
3300016404\|Ga0182037_10738119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	845	Open in IMG/M
3300016404\|Ga0182037_11156768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300016404\|Ga0182037_11529537	Not Available	592	Open in IMG/M
3300016422\|Ga0182039_10562427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	993	Open in IMG/M
3300016422\|Ga0182039_12181764	Not Available	511	Open in IMG/M
3300021170\|Ga0210400_10380339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1164	Open in IMG/M
3300021560\|Ga0126371_13632667	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300021560\|Ga0126371_13657310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300026095\|Ga0207676_10338819	Not Available	1387	Open in IMG/M
3300026328\|Ga0209802_1332050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300031545\|Ga0318541_10736383	Not Available	550	Open in IMG/M
3300031546\|Ga0318538_10564239	Not Available	617	Open in IMG/M
3300031564\|Ga0318573_10186261	All Organisms → cellular organisms → Bacteria → Proteobacteria	1098	Open in IMG/M
3300031564\|Ga0318573_10554351	Not Available	619	Open in IMG/M
3300031572\|Ga0318515_10182571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1123	Open in IMG/M
3300031572\|Ga0318515_10755529	Not Available	514	Open in IMG/M
3300031668\|Ga0318542_10399056	Not Available	710	Open in IMG/M
3300031719\|Ga0306917_10614826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	854	Open in IMG/M
3300031723\|Ga0318493_10025206	All Organisms → cellular organisms → Bacteria → Proteobacteria	2662	Open in IMG/M
3300031723\|Ga0318493_10767254	Not Available	542	Open in IMG/M
3300031724\|Ga0318500_10680458	Not Available	524	Open in IMG/M
3300031744\|Ga0306918_10079956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2272	Open in IMG/M
3300031744\|Ga0306918_10428598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1032	Open in IMG/M
3300031744\|Ga0306918_11413528	Not Available	533	Open in IMG/M
3300031748\|Ga0318492_10401896	Not Available	720	Open in IMG/M
3300031768\|Ga0318509_10001156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8700	Open in IMG/M
3300031768\|Ga0318509_10564498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300031771\|Ga0318546_10070783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2225	Open in IMG/M
3300031780\|Ga0318508_1150908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300031780\|Ga0318508_1234781	Not Available	526	Open in IMG/M
3300031781\|Ga0318547_10600882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	682	Open in IMG/M
3300031781\|Ga0318547_10954745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300031782\|Ga0318552_10246881	Not Available	905	Open in IMG/M
3300031793\|Ga0318548_10493756	Not Available	598	Open in IMG/M
3300031797\|Ga0318550_10611603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300031820\|Ga0307473_10207661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1168	Open in IMG/M
3300031835\|Ga0318517_10316353	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300031890\|Ga0306925_10342617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1605	Open in IMG/M
3300031890\|Ga0306925_10602996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1159	Open in IMG/M
3300031890\|Ga0306925_10617106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1144	Open in IMG/M
3300031890\|Ga0306925_11673582	Not Available	615	Open in IMG/M
3300031896\|Ga0318551_10844424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300031910\|Ga0306923_11274907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	781	Open in IMG/M
3300031912\|Ga0306921_10350758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1725	Open in IMG/M
3300031912\|Ga0306921_10618276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1251	Open in IMG/M
3300031912\|Ga0306921_11947426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300031941\|Ga0310912_10049322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2952	Open in IMG/M
3300031942\|Ga0310916_10036034	Not Available	3681	Open in IMG/M
3300031942\|Ga0310916_11373717	Not Available	579	Open in IMG/M
3300031945\|Ga0310913_10820975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300031945\|Ga0310913_10911468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300031946\|Ga0310910_10122388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1959	Open in IMG/M
3300031946\|Ga0310910_11464128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300031947\|Ga0310909_10138358	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300031947\|Ga0310909_11210316	Not Available	610	Open in IMG/M
3300031947\|Ga0310909_11345936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300031947\|Ga0310909_11371345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300031954\|Ga0306926_10887937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1068	Open in IMG/M
3300031954\|Ga0306926_11105060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	937	Open in IMG/M
3300031959\|Ga0318530_10238556	Not Available	748	Open in IMG/M
3300031981\|Ga0318531_10048802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1791	Open in IMG/M
3300032001\|Ga0306922_11788088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300032001\|Ga0306922_12106216	Not Available	546	Open in IMG/M
3300032010\|Ga0318569_10121388	All Organisms → cellular organisms → Bacteria → Proteobacteria	1191	Open in IMG/M
3300032035\|Ga0310911_10413015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	781	Open in IMG/M
3300032042\|Ga0318545_10020182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2113	Open in IMG/M
3300032052\|Ga0318506_10060880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1546	Open in IMG/M
3300032052\|Ga0318506_10364599	Not Available	641	Open in IMG/M
3300032066\|Ga0318514_10755448	Not Available	517	Open in IMG/M
3300032076\|Ga0306924_10226612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2146	Open in IMG/M
3300032076\|Ga0306924_11252895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	799	Open in IMG/M
3300032174\|Ga0307470_10057039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2035	Open in IMG/M
3300032261\|Ga0306920_100270718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2533	Open in IMG/M
3300032261\|Ga0306920_102280697	Not Available	750	Open in IMG/M
3300032261\|Ga0306920_103134725	Not Available	620	Open in IMG/M
3300032261\|Ga0306920_103461493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300032261\|Ga0306920_103731885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300033289\|Ga0310914_10478157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1127	Open in IMG/M
3300033289\|Ga0310914_10697845	Not Available	911	Open in IMG/M
3300033290\|Ga0318519_10033948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2435	Open in IMG/M
3300033290\|Ga0318519_10858565	Not Available	560	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.18%
Host-Associated	Host-Associated	1.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.27%
Plants	Host-Associated → Plants	1.82%
Aquatic	Environmental → Aquatic	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.27%
Sediment	Environmental → Aquatic → Sediment	0.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.82%
Loam	Environmental → Terrestrial → Soil → Loam	5.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	82.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10484261	3300000579	Forest Soil	MKKLSMIGIVGGAVLLAAVPLSLQWSQVGPAVPLLTVSHANAQYYGPHRRHVRRVYRRAY
AF_2010_repII_A1DRAFT_101089391	3300000597	Forest Soil	MKKLSMLGIVGGAALLAAVPLSLQRSQETAVPLLTLSQASAQYYYGPYRRHVRRVYR
AF_2010_repII_A1DRAFT_101773872	3300000597	Forest Soil	MKKFSLLGIIGGAALLAAVPFSLQWSQENAGSVPLLTVSHANAQYYYGPYRRHVRRVYRRAYRRAYYG
Ga0066819_10280101	3300005148	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRR
Ga0070707_1023479611	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLSMLGIVGGAALLAAVPFSLQWSQETAGPAVPSLTLSHANAQPYRRHVRRVYRRAYRRAYYGYPYSYGGYS
Ga0066905_1010393791	3300005713	Tropical Forest Soil	MKKLGMIGIVGGAALLAAVPLSLQWSQEGPAVPLLTVSHANAQYYGPSRRHVRRVYRR
Ga0066903_1038662182	3300005764	Tropical Forest Soil	MKKLSMLGIVGGAALLAAVPFSLQWSQGSVGPAVPLLTLSHANAQYYGPNRRHVRRVYRRAYRRAYGG
Ga0066903_1041418671	3300005764	Tropical Forest Soil	MKKFSMPGIIGGAAFLAAVPFSLQWSQENAGSVPLLTVSHANAQYYYGPYRRHVRRVYR
Ga0066903_1060880781	3300005764	Tropical Forest Soil	MKKFSLLGIIGGAALLAAVPFSLQWSQENAGSVPLLTVSHANAQYYYGPYRRHVRRVYR
Ga0066903_1090594451	3300005764	Tropical Forest Soil	MKKLSMFGIAGGAALLAAVPFSLQWSEENVGTSAVPLLTLSHANAQPYRRHVRRVYRRAYRRAYYG
Ga0075018_100728531	3300006172	Watersheds	MKKLSMLGIVGGAALLAAVPFSLQWSQGNVGPAVPLLTLSHANAQHYGPNRRHVRRVYRRAN
Ga0074062_114497491	3300006606	Soil	MKKLSVLGIISGAALLAAVPFSLQWSQETAGPAVPSLTLSHANAQPYRRHVRRVYRRAYRRAYYGSPYSYG
Ga0075433_108088892	3300006852	Populus Rhizosphere	MKKLSMIGIVGGAALLAAVPLSLQWSQGNVGPAVPLLTVSHANAQYYGPNRRHVRRVYRR
Ga0126380_108773401	3300010043	Tropical Forest Soil	MKKLSMLGIVGGAALLAAVPFSLQWSQENVGPAVPLLTLSQANAQYYGPYCRHVRRVYR
Ga0126384_118387211	3300010046	Tropical Forest Soil	MKKLSMLGIIGGAALLTAVPFSLQWSQETAVPLLTLSQANAQYYYGPYRRHVRRVYRRA
Ga0126373_124148881	3300010048	Tropical Forest Soil	MKKLSMIGIVGGAVLLAAVPLSLQWSQVGPAVPLLTVSHANAQYYGPHRRHVRRVYRRAYRRAYGGY
Ga0126383_133654502	3300010398	Tropical Forest Soil	MKRLSVLGIVGGAALLAAVPFSLQWSQEGSAVPLLTLSQANAQYYYGPYRRHVRRVYRRAYRRAYYGY
Ga0164298_103370341	3300012955	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVGTAVPLLTVSHANAQYHGPYRRHVRRVYRRYYRRA
Ga0182036_111049611	3300016270	Soil	MKKLSMLGIVGGATLLAAVPFSLQWSHVGPAVPLLTVSHANAQYYYGPYRRHVRRVYR
Ga0182036_115663421	3300016270	Soil	MKRLSVLGIVGGAALLAAVPFSLQWSQGNVGPAVPLLTLSHANAQYYGPYRRHVRRVYRRAYRRAYYGYPYSYGG
Ga0182041_104545941	3300016294	Soil	MKKLSMLGIVSGAALLAAVPFSLQWSQENVGPAVPLLTLSQANAQYYYGPYRRHVRRVYRRAYRRA
Ga0182041_107088801	3300016294	Soil	MKKFSMLGIVGGALLLAAVPLSLQWSQVRSAVPQLTVSHANAQYYYGPYRRHVRRVYRRAYRRGYY
Ga0182041_109398062	3300016294	Soil	MKKLSMLGIVSGAALLATVPFSLQWSQVGGPAVPLLTVSHANAQYYGPSRRHVRRVYRRAYRRAYGGYPS
Ga0182041_110455682	3300016294	Soil	MKKLSMLGIVSGAALLATVPFSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYR
Ga0182033_105571771	3300016319	Soil	MKKLSMLGIVSGAALLATVPFSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRRAYRRAYGGY
Ga0182032_104574684	3300016357	Soil	MTKLSMLGIVGGAALLAAVPFSLQWSQETAGPAVPLLTLSHANAQPYRRHVRRVYRRAYRRAY
Ga0182032_113806792	3300016357	Soil	MKKLSMIGIVGGAALLAVVPLSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRRAYRRAYGGYPSSY
Ga0182034_104080311	3300016371	Soil	MKKLSMLGIVGGAALLAAVPFTLQWSQENVGPAVPLLTLSQANAQYYYGPYRRHVRRVYRRAYRRAYYG
Ga0182037_103130811	3300016404	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYR
Ga0182037_107381191	3300016404	Soil	MTKLSMLGIVGGAALLAAVPFSLQWSQENVGPAVPLLTLSQANAQYYYGPYRRHVRRVYR
Ga0182037_111567681	3300016404	Soil	MKKLSMLGIVGGAALLAAVPFSLQWSQENVGPAVPLLTLSQANAQYYYGPYRRHVRRVYRRAY
Ga0182037_115295372	3300016404	Soil	MKKFSMLGIIGGAALLAAVPFSLQSNVGSAVPLLTVSQANAQYYYGPYRRHVRRVYRRAYRRAYYGGYYGGYSP
Ga0182039_105624273	3300016422	Soil	MKKLSMLGIVSGAALLATVPFSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRRAYRRAYG
Ga0182039_121817641	3300016422	Soil	MKKFSMLGIIGGAALLAAVPFSLQSNVGSAVPLLTVSQANAQYYYGPYRRHVRRVYRRAYRRAYYG
Ga0210400_103803392	3300021170	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVSPAVPLLTVSHANAQYYGPNRRHVRRVYRRAY
Ga0126371_136326672	3300021560	Tropical Forest Soil	MTKLGMLGIVGGAALLAAVPFSLQWSQGNVGAAVPLLTLSHANAQYAGPNRRHVRRVYRR
Ga0126371_136573101	3300021560	Tropical Forest Soil	MKKLSMLGIVGGAALLAAAPFSLRWSQEGSAVPLLTVSHANAQYYGPSRRHVRRVYR
Ga0207676_103388194	3300026095	Switchgrass Rhizosphere	MKKLSMLGIVGGAALLAAVPFSLQWSQGNVGPAVPLLTVSHANAQYYGPNRRQVRRVYRRANRRGYGGYPSSY
Ga0209802_13320501	3300026328	Soil	MKKLSMLGIVGGAALLAAVPFSLQWSQGNVGPAVPLLTLSHANAQYYGPNRRHVRRVYRRASRRAYGGYPSPY
Ga0318541_107363831	3300031545	Soil	MKKFSMLGIVGGALLLAAVPLSLQWSQVRSAVPQLTVSHANAQYYYGPYRRHVRRVYRRAYRRGYYGG
Ga0318538_105642391	3300031546	Soil	MKKFSVLGIVGVAALLAAVPFSLQWSQETAVPLLTLSHANAQYYYGPYRRHVRRVYRRAYRRAYYGY
Ga0318573_101862613	3300031564	Soil	MKKLSMLGIVSGAALLAAVPFSLQWSQENVGPAVPLLTLSHANAQYYYGPYRRHVRRVYR
Ga0318573_105543511	3300031564	Soil	MKRLSVLGIVGGAALLAAVPFSLQWSQETAGPTVPLLTLSHANAQPYRRHVRRVYRRAYRRAYYGSP
Ga0318515_101825711	3300031572	Soil	MKKLSMLGIVGGAALLAAVPFSLQWSQGNVGPAVPLLTLSHANAQYYGPYRRHVRRVYRRAYRRAYYGGYPYSY
Ga0318515_107555291	3300031572	Soil	MKKFSMLGIVGGALLLAAVPLSLQWSQVRSAVPQLTVSHANAQYYYGPYRRHVRRVYRRAYRR
Ga0318542_103990561	3300031668	Soil	MKKFSVLGIVGVAALLAAVPFSLQWSQETAVPLLTLSHANAQYYYGPYRRHVRRVYR
Ga0306917_106148261	3300031719	Soil	MKKFSMLGIIGGAALLAAVPFSLQWSQVGPAVPLLTLSQANAQYYGPYRRHVRRVYR
Ga0318493_100252061	3300031723	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRRTYRRAYG
Ga0318493_107672541	3300031723	Soil	MKKFSMLGIIGGAALLAAVPFSLQWSQVGPAVPLLTLSQANAQYYGPYRRHVRRVYRRAYRRAYYGYRYSYGGYS
Ga0318500_106804581	3300031724	Soil	MTKLGMLGIIGGAALLAAVPFSLQWSQVGPAVPLLTLSQANAQYYGPYRRHVRRVYRRA
Ga0306918_100799561	3300031744	Soil	MKKLSMIGIVGGAALLAAVPFSLQWSQGNVGPAVPLLTLSHANAQYYGPNRRHVRRVYRRTYRRAYGG
Ga0306918_104285983	3300031744	Soil	MTKLSVLGTVGGAALLAAVPFSLQWSQENVGPAVPLLTVSQANAQYYYGPYRRHVRRVYRRAYRRAYYGGYPY
Ga0306918_114135283	3300031744	Soil	MKKLSMLGIVVGAALLTATPFSLQWSQERSAVPLLTLSHANAQYYGPYRRHVRRV
Ga0318492_104018961	3300031748	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRRAY
Ga0318509_1000115610	3300031768	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRV
Ga0318509_105644981	3300031768	Soil	MKKLSMLGIVGGAALLAAVPFTLQWSQENVGPAVPLLTLSQANAQYYYGPYRRHVRRVYRRAYRRAYYGGYPYS
Ga0318546_100707834	3300031771	Soil	MKKLSMLGIVGGAALLAAVPFSLQWSQEAAGPAVPLLTLSHANAQPYRRHVRRVYRRAYRRAYYGGYYGG
Ga0318508_11509081	3300031780	Soil	MKKLSMLGIVSGAALLAAVPFSLQWSQENVGPAVPLLTLSHANAQYYYGPYRRHVRRVYRRAYRRAYYGYPY
Ga0318508_12347811	3300031780	Soil	MKKLSMLGIVVGAALLTATPFSLQWSQERSAVPLLTLSHANAQYYGPYRRHVRRVYRRAYRRAYYG
Ga0318547_106008821	3300031781	Soil	MKKLSMLGIVGGAAILAAVPFSLQWSQGNVGPAVPLLTLSHANAQHYGPSRRHVRRVYRRAYRRAYGGYP
Ga0318547_109547452	3300031781	Soil	MKKLLGIVGGAALLAAVPFSLQWSQENVGSAVPLLTLSQANAQYYYGPYRRHVRRVYRRAYR
Ga0318552_102468811	3300031782	Soil	MKKLSMLGIVGGAALLAAVPFSLQWSQGNVGPAVPLLTLSHANAQYYGPNRRHVRRVYRRAYRRAYGG
Ga0318548_104937562	3300031793	Soil	MKKLSMIGIVGGAALLAVVPLSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRRAYRRAYGGYP
Ga0318550_106116031	3300031797	Soil	MKKLSMLGIVGGAAILAAVPFSLQWSQGNVGPAVPLLTLSHANAQHYGPNRRHVRRVYRRAYRRAYGGYPSS
Ga0307473_102076611	3300031820	Hardwood Forest Soil	MKKLSMIGIVGGAALLAAVPFSLQWSQGKVGPAVPLLTVSHANAQYYGPNRRQVRRVYRRANRRAYGGY
Ga0318517_103163532	3300031835	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVGPAVPLLTVSHANAQYYGPYRRHVRRV
Ga0306925_103426175	3300031890	Soil	MKKFSMLGIIGGAVLLAAVPFSLQSNVGSAVPLLTVSQANAQYYYGPYRRHVRRVYRRAYRRAYYGGYYGGYSP
Ga0306925_106029962	3300031890	Soil	MKKLSMLGIVGGAALLAAVPFSLQWSQETAVPLLTVSHANAQYYGPYRRHARRVYRRAYRRAYYGGYPYSY
Ga0306925_106171064	3300031890	Soil	MKKLSMLGIVSGAALLATVPFSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRR
Ga0306925_116735822	3300031890	Soil	MKRLSVLGIVGGAALLAAVPFSLQWSQETAGPTVPLLTLSHANAQPYRRHVRRVYRRAYRRAYYGSPYSY
Ga0318551_108444241	3300031896	Soil	MTKLSVLGTVGGAALLAAVPFSLQWSQENVGPAVPLLTVSQANAQYYYGPYRRHVRRVYRRAYRRAYYGGYP
Ga0306923_112749071	3300031910	Soil	MKKFSMLGIVGGALLLAAVPFSLEWSQVRSAVPQLTVSHANAQYYYGPYRRHVRRV
Ga0306921_103507581	3300031912	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVGSAVPLLTVSHANAQYYGPYRRHVRRVYRRAYRRAYGGYPSPYP
Ga0306921_106182761	3300031912	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRRAYRRAYG
Ga0306921_119474261	3300031912	Soil	MKKLLGIVGGAALLAAVPFSLQWSQENVGSAVPLLTLSQANAQYYYGPYRRHVRRVYRRAYRRA
Ga0310912_100493227	3300031941	Soil	MKKFSMLGIIGGAALLAAVPFSLQSKVGSTVPLLTVSHADAQYYYGPYRRHVRRVYRRAYRRAYYGGYYGGY
Ga0310916_100360341	3300031942	Soil	MKKLSILGIVGGAALLAAVPFSLQSKVGSTVPLLTVSHADAQYYYGPYRRHVRRVYRRAYRRAYYGGYYGGYS
Ga0310916_113737171	3300031942	Soil	MKRLSVLGIVGGAALLAAVPFSLQWSQETAGPTVPLLTLSHANAQPYRRHVRRVYRRA
Ga0310913_108209751	3300031945	Soil	MKKLSMLGIVGGAALLAAVPFSLQWSQEAAGPAVPLLTLSHANAQPYRRHVRRVYRRAYRRAYYG
Ga0310913_109114681	3300031945	Soil	MKRLSMLGIVGGAALLAAVPFSLQWSQETAGPAVPLLTLSHANAQPYRRHVRRVYRRA
Ga0310910_101223885	3300031946	Soil	MKKLSMLGIVSGAALLATVPFSLQWSQVGGPAVPLLTVSHANAQYYGPSRRHVRRVYRRAYRRAYG
Ga0310910_114641281	3300031946	Soil	MKKLSMLGIVGGAALLSAVPFSLQWSQETAGPAVPSLTLSHANAQPYRRHVRRVYRRAYRRAYYGSPYSYGGYGG
Ga0310909_101383585	3300031947	Soil	MKKLLGIVGGAALLAAVPFSLQWSQENVGSAVPLLTLSQANAQYYYGPYRRHVRRVYRRAYRRAYYGGYPY
Ga0310909_112103161	3300031947	Soil	MKKLSMIGIVGGAALLAVVPLSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRRAYRRAYGGYPSS
Ga0310909_113459361	3300031947	Soil	MKKFSMLGIVGGALLLAAVPFSLEWSQVRSAVPQLTVSHANAQYYYGPYRRHVRRVYRRAYRRGYYGGYYG
Ga0310909_113713451	3300031947	Soil	MTKLSVLGTVGGAALLAAVPFSLQWSQENVGPAVPLLTVSQANAQYYYGPYRRHVRRVYRRAYRRAYYG
Ga0306926_108879371	3300031954	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVGPAVPLLTVSHANAQYYGPYRRHVRRVYRRAY
Ga0306926_111050603	3300031954	Soil	MKKFSMLGIIGGAALLAAVPFSLQSNVGSAVPLLTVSQANAQYYYGPYRRHVRRVYRRAYRR
Ga0318530_102385561	3300031959	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVHRVYRRAYRRAYGGYP
Ga0318531_100488021	3300031981	Soil	MRKFRMLGIIGGAALLAAVPFSLQWSQVGPAVPLLTLSQANAQYYGPYRRHVRRVYRRAYRRAYYGYPY
Ga0306922_117880882	3300032001	Soil	MKKLSLLGIVGGAALLAAVPFSLQWSQENVGPAVPLLTLSQANAQYYYGPYRRHVRRV
Ga0306922_121062161	3300032001	Soil	MKKLSMIGIVGGAALLAVVPLSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRR
Ga0318569_101213881	3300032010	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRRAYRRAYGGYP
Ga0310911_104130152	3300032035	Soil	MKKFSMLGIVGGALLLAAVPFSLQWSQVRSAVPQLTVSHANAQYYYGPYRRHVRRVYRRAYRRGYYG
Ga0318545_100201821	3300032042	Soil	MKKFSMLGIIGGAALLAAVPFSLQWSQVGPAVPLLTLSQANAQYYGPYRRHVRRVYRRAY
Ga0318506_100608804	3300032052	Soil	MKKLSMLGIVGGAALLAAVPFTLQWSQENVGPAVPLLTLSQANAQYYYGPYRRHVRRVYRRAYRRAYYGGYP
Ga0318506_103645992	3300032052	Soil	MKKFSMLGIIGGAVLLAAVPFSLQSNVGSAVPLLTVSQANAQYYYGPYRRHVRRVYRRAY
Ga0318514_107554481	3300032066	Soil	MKKFSMLGIIGGAALLAAVPFSLQWSQVGPAVPLLTLSQANAQYYGPYRRHVRRVYRRA
Ga0306924_102266125	3300032076	Soil	MKKLSMLGIVSGAALLATVPFSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRRA
Ga0306924_112528951	3300032076	Soil	MKKLSMLGIVGGAALLAAVPFSLQWSQETAVPLLTVSHANAQYYGPYRRHARRVY
Ga0307470_100570391	3300032174	Hardwood Forest Soil	MKKLSMIGIVGGAALLAAVPFSLQWSQGKVGPAVPLLTVSHANAQYYGPNRRQVRRVYRRANRRAYGGYPSSY
Ga0306920_1002707184	3300032261	Soil	MKKLSMLGIVSGAALLATVPFSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRRAY
Ga0306920_1022806971	3300032261	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRRAYRRAY
Ga0306920_1031347252	3300032261	Soil	MKKLSMIGIVGGAALLAVVPLSLQWSQVGPAVPLLTVSHANAQYYGPSRRHVRRVYRRAYRRAYGGYPSSYGG
Ga0306920_1034614931	3300032261	Soil	MKKLSMLGIVGGAALLAAVPFSLQWSQENVGPAVPLLTLSQANAQYYYGPYRRHVRRVYRRAYRRAYY
Ga0306920_1037318851	3300032261	Soil	MKKLSMLGIVGGAALLAAVPFSLQWSQENVGPAVPLLTVSHANAQYYRRVYRRAYRR
Ga0310914_104781571	3300033289	Soil	MKKLSMLGIVGGAALLAAVPFSLQWSQENVGPAVPLLTLSQANAQYYYGPYRRHVRRVYRRAYRRAYYGGYPY
Ga0310914_106978452	3300033289	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVGSAVPLLTVSHANAQYYGPYRRHVRRVYRRAY
Ga0318519_100339481	3300033290	Soil	MKKFSMLGIIGGAVLLAAVPFSLQSNVGSAVPLLTVSQANAQYYYGPYRRHVRRVYRRAYRRAYYG
Ga0318519_108585651	3300033290	Soil	MKKLSMIGIVGGAALLAAVPLSLQWSQVGPAVPLLTVSHANAQYYGPYRRHVRRVYRRAYRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087705

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences