Metagenome Family F087675

Basic Information
Family ID	F087675
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	41 residues
Representative Sequence	RLVFAPPLVIEAAEIEDISQRLERALDDVADDLKREGALG
Number of Associated Samples	95
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.91 %
% of genes near scaffold ends (potentially truncated)	97.27 %
% of genes from short scaffolds (< 2000 bps)	87.27 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Most Common Taxonomy
Group	Bacteria (80.909 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.091 % of family members)
Environment Ontology (ENVO)	Unclassified (37.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.818 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.29% β-sheet: 0.00% Coil/Unstructured: 64.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF03458	Gly_transporter	13.64
PF02129	Peptidase_S15	8.18
PF03401	TctC	5.45
PF13302	Acetyltransf_3	3.64
PF02798	GST_N	3.64
PF00817	IMS	3.64
PF00202	Aminotran_3	2.73
PF04909	Amidohydro_2	1.82
PF13591	MerR_2	1.82
PF00067	p450	1.82
PF11799	IMS_C	1.82
PF01048	PNP_UDP_1	1.82
PF13458	Peripla_BP_6	1.82
PF14520	HHH_5	1.82
PF02653	BPD_transp_2	0.91
PF12973	Cupin_7	0.91
PF01370	Epimerase	0.91
PF08530	PepX_C	0.91
PF09250	Prim-Pol	0.91
PF08240	ADH_N	0.91
PF11026	DUF2721	0.91
PF08241	Methyltransf_11	0.91
PF02738	MoCoBD_1	0.91
PF02518	HATPase_c	0.91
PF03640	Lipoprotein_15	0.91
PF05199	GMC_oxred_C	0.91
PF01435	Peptidase_M48	0.91
PF00557	Peptidase_M24	0.91
PF09907	HigB_toxin	0.91
PF08837	DUF1810	0.91
PF09084	NMT1	0.91
PF13545	HTH_Crp_2	0.91
PF00903	Glyoxalase	0.91
PF02538	Hydantoinase_B	0.91
PF06736	TMEM175	0.91
PF13410	GST_C_2	0.91
PF01418	HTH_6	0.91
PF00497	SBP_bac_3	0.91
PF08032	SpoU_sub_bind	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2860	Uncharacterized membrane protein YeiH	Function unknown [S]	13.64
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	5.45
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	3.64
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	1.82
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	1.82
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	1.82
COG2124	Cytochrome P450	Defense mechanisms [V]	1.82
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	1.82
COG5579	Uncharacterized conserved protein, DUF1810 family	Function unknown [S]	0.91
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.91
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.91
COG2936	Predicted acyl esterase	General function prediction only [R]	0.91
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.91
COG1737	DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains	Transcription [K]	0.91
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.91
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.91 %
Unclassified	root	N/A	19.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.91 %
Unclassified	root	N/A	19.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.91 %
Unclassified	root	N/A	19.09 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	62.73 %
Unclassified	root	N/A	19.09 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.27 %
Unclassified	root	N/A	19.09 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.64 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.09 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.73 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.36 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.82 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.82 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.91 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.91 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.09 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	4.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.64 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.73 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.82 %
Kaistiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae	0.91 %
Thalassobaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae	0.91 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.91 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.91 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.91 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.91 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.09 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	4.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.64 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.73 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	1.82 %
Bauldia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia	0.91 %
Nisaea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Nisaea	0.91 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.91 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.91 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.91 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.91 %
unclassified Methylococcaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae	0.91 %
Rubritepida	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rubritepida	0.91 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.09 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	4.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.64 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.73 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	1.82 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.91 %
Methylococcaceae bacterium NSP1-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium NSP1-1	0.91 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.91 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.91 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.91 %
Rubritepida flocculans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rubritepida → Rubritepida flocculans	0.91 %
Nisaea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Nisaea	0.91 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.91 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	19.09 %
Mesorhizobium sp. LSJC277A00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC277A00	4.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.64 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.73 %
Acidipila sp. EB88	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp. EB88	1.82 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.91 %
Amycolatopsis jejuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis jejuensis	0.91 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.91 %
Methylococcaceae bacterium NSP1-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium NSP1-1	0.91 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.91 %
Rubritepida flocculans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rubritepida → Rubritepida flocculans	0.91 %
Nisaea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Nisaea	0.91 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.91 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_13858496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	572	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100574004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	582	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10011041	All Organisms → cellular organisms → Bacteria	2494	Open in IMG/M
3300000956\|JGI10216J12902_105723524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	510	Open in IMG/M
3300000956\|JGI10216J12902_113632247	Not Available	707	Open in IMG/M
3300001431\|F14TB_102310281	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300001661\|JGI12053J15887_10181442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1083	Open in IMG/M
3300004268\|Ga0066398_10057554	All Organisms → cellular organisms → Bacteria → Proteobacteria	805	Open in IMG/M
3300004633\|Ga0066395_10858007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rubritepida → Rubritepida flocculans	548	Open in IMG/M
3300005332\|Ga0066388_107680679	Not Available	540	Open in IMG/M
3300005347\|Ga0070668_101224768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300005364\|Ga0070673_101501334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300005435\|Ga0070714_100596828	All Organisms → cellular organisms → Bacteria → Proteobacteria	1060	Open in IMG/M
3300005436\|Ga0070713_100301904	All Organisms → cellular organisms → Bacteria → Proteobacteria	1474	Open in IMG/M
3300005467\|Ga0070706_100179185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1978	Open in IMG/M
3300005518\|Ga0070699_100098459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2562	Open in IMG/M
3300005559\|Ga0066700_10017091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3959	Open in IMG/M
3300005586\|Ga0066691_10241420	All Organisms → cellular organisms → Bacteria → Proteobacteria	1059	Open in IMG/M
3300005615\|Ga0070702_101288143	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300005713\|Ga0066905_100821201	All Organisms → cellular organisms → Bacteria → Proteobacteria	808	Open in IMG/M
3300005713\|Ga0066905_100949477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	755	Open in IMG/M
3300005842\|Ga0068858_101305402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300006028\|Ga0070717_10637744	All Organisms → cellular organisms → Bacteria → Proteobacteria	967	Open in IMG/M
3300006059\|Ga0075017_101685865	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300006173\|Ga0070716_100047039	Not Available	2431	Open in IMG/M
3300006175\|Ga0070712_100929879	Not Available	750	Open in IMG/M
3300006176\|Ga0070765_100263528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1584	Open in IMG/M
3300006847\|Ga0075431_101412169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	655	Open in IMG/M
3300006903\|Ga0075426_10525782	All Organisms → cellular organisms → Bacteria → Proteobacteria	880	Open in IMG/M
3300006903\|Ga0075426_11265954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300009553\|Ga0105249_10890002	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp. EB88	957	Open in IMG/M
3300010047\|Ga0126382_10003043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7199	Open in IMG/M
3300010047\|Ga0126382_10140577	All Organisms → cellular organisms → Bacteria → Proteobacteria	1636	Open in IMG/M
3300010048\|Ga0126373_11195385	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300010358\|Ga0126370_11178454	All Organisms → cellular organisms → Bacteria → Proteobacteria	711	Open in IMG/M
3300010359\|Ga0126376_11463106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC277A00	710	Open in IMG/M
3300010361\|Ga0126378_10244494	All Organisms → cellular organisms → Bacteria → Proteobacteria	1886	Open in IMG/M
3300010361\|Ga0126378_11888119	Not Available	680	Open in IMG/M
3300010362\|Ga0126377_11288907	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300010398\|Ga0126383_10319039	All Organisms → cellular organisms → Bacteria → Proteobacteria	1561	Open in IMG/M
3300010398\|Ga0126383_10344746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1507	Open in IMG/M
3300010398\|Ga0126383_11492105	All Organisms → cellular organisms → Bacteria → Proteobacteria	766	Open in IMG/M
3300012202\|Ga0137363_10218497	All Organisms → cellular organisms → Bacteria	1537	Open in IMG/M
3300012202\|Ga0137363_11166703	Not Available	655	Open in IMG/M
3300012204\|Ga0137374_10783389	Not Available	708	Open in IMG/M
3300012350\|Ga0137372_10443678	Not Available	974	Open in IMG/M
3300012357\|Ga0137384_10479443	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300012357\|Ga0137384_11028106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	662	Open in IMG/M
3300012361\|Ga0137360_11205892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300012948\|Ga0126375_10812432	Not Available	742	Open in IMG/M
3300012957\|Ga0164303_10942277	Not Available	609	Open in IMG/M
3300012961\|Ga0164302_11082905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300012971\|Ga0126369_10358945	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300013296\|Ga0157374_11311064	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp. EB88	746	Open in IMG/M
3300014254\|Ga0075312_1047487	Not Available	811	Open in IMG/M
3300015371\|Ga0132258_11036332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2074	Open in IMG/M
3300015372\|Ga0132256_100097848	All Organisms → cellular organisms → Bacteria → Proteobacteria	2851	Open in IMG/M
3300015373\|Ga0132257_102955982	Not Available	619	Open in IMG/M
3300015374\|Ga0132255_100040904	All Organisms → cellular organisms → Bacteria → Proteobacteria	5962	Open in IMG/M
3300015374\|Ga0132255_100722350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1480	Open in IMG/M
3300016294\|Ga0182041_10205999	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300016341\|Ga0182035_10171971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1687	Open in IMG/M
3300016357\|Ga0182032_10265086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC277A00	1342	Open in IMG/M
3300016371\|Ga0182034_11366861	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC277A00	619	Open in IMG/M
3300016387\|Ga0182040_10997132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	698	Open in IMG/M
3300016404\|Ga0182037_10489706	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300016422\|Ga0182039_10904250	Not Available	788	Open in IMG/M
3300016445\|Ga0182038_10207084	All Organisms → cellular organisms → Bacteria → Proteobacteria	1548	Open in IMG/M
3300016445\|Ga0182038_10225699	Not Available	1491	Open in IMG/M
3300017959\|Ga0187779_10555750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassobaculaceae → Nisaea	764	Open in IMG/M
3300018062\|Ga0187784_11271208	All Organisms → cellular organisms → Bacteria → Proteobacteria	584	Open in IMG/M
3300018422\|Ga0190265_12859421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → unclassified Methylococcaceae → Methylococcaceae bacterium NSP1-1	577	Open in IMG/M
3300020579\|Ga0210407_11167388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC277A00	581	Open in IMG/M
3300021560\|Ga0126371_10995282	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300025928\|Ga0207700_11404530	Not Available	621	Open in IMG/M
3300025929\|Ga0207664_10524301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1062	Open in IMG/M
3300026852\|Ga0207838_104317	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300027605\|Ga0209329_1136402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	540	Open in IMG/M
3300031545\|Ga0318541_10061098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1957	Open in IMG/M
3300031561\|Ga0318528_10427356	Not Available	711	Open in IMG/M
3300031561\|Ga0318528_10725704	All Organisms → cellular organisms → Bacteria → Proteobacteria	531	Open in IMG/M
3300031573\|Ga0310915_10634509	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300031640\|Ga0318555_10565029	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300031679\|Ga0318561_10046851	All Organisms → cellular organisms → Bacteria → Proteobacteria	2150	Open in IMG/M
3300031719\|Ga0306917_10846678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	716	Open in IMG/M
3300031724\|Ga0318500_10120263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1213	Open in IMG/M
3300031744\|Ga0306918_10138110	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300031747\|Ga0318502_10276829	Not Available	983	Open in IMG/M
3300031782\|Ga0318552_10738052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300031795\|Ga0318557_10290126	Not Available	751	Open in IMG/M
3300031835\|Ga0318517_10086955	All Organisms → cellular organisms → Bacteria	1359	Open in IMG/M
3300031860\|Ga0318495_10143248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1077	Open in IMG/M
3300031879\|Ga0306919_10216773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1428	Open in IMG/M
3300031890\|Ga0306925_10593186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis jejuensis	1171	Open in IMG/M
3300031893\|Ga0318536_10312472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	797	Open in IMG/M
3300031897\|Ga0318520_10903960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	556	Open in IMG/M
3300031910\|Ga0306923_10092385	All Organisms → cellular organisms → Bacteria	3407	Open in IMG/M
3300031910\|Ga0306923_12511651	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300031912\|Ga0306921_10757599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1112	Open in IMG/M
3300031942\|Ga0310916_11324071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC277A00	592	Open in IMG/M
3300031945\|Ga0310913_11125073	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031954\|Ga0306926_10091704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3713	Open in IMG/M
3300031954\|Ga0306926_10264423	Not Available	2131	Open in IMG/M
3300032010\|Ga0318569_10226574	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300032052\|Ga0318506_10066231	All Organisms → cellular organisms → Bacteria → Proteobacteria	1491	Open in IMG/M
3300032065\|Ga0318513_10023417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2606	Open in IMG/M
3300032076\|Ga0306924_11126792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	854	Open in IMG/M
3300032076\|Ga0306924_12577850	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300032261\|Ga0306920_100296096	Not Available	2410	Open in IMG/M
3300033289\|Ga0310914_11055708	Not Available	713	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.18%
Host-Associated	Host-Associated	11.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.27%
Plants	Host-Associated → Plants	11.82%
Aquatic	Environmental → Aquatic	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.55%
Sediment	Environmental → Aquatic → Sediment	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.36%
Loam	Environmental → Terrestrial → Soil → Loam	18.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.27%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.82%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014254	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026852	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 62 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087675

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_138584961	3300000363	Soil	DRLVFAPPLVIETGEIEDVSARLERALDDVAADLGREGAVR*
INPhiseqgaiiFebDRAFT_1005740042	3300000364	Soil	PPLVIEPPQIEQIGDRLEQALDDVAIELKNDGGLR*
AF_2010_repII_A1DRAFT_100110414	3300000597	Forest Soil	LVFAPPLVIEASEIEDVSERLERALDDVADDLKREGALG*
JGI10216J12902_1057235241	3300000956	Soil	PLVIEASEIEDISARLERALGDVGDDLKREGALG*
JGI10216J12902_1136322471	3300000956	Soil	GLILRVVGDRLVFAPPLVIEPPQIEQIGERLEHALNDVAIELKNEGSLR*
F14TB_1023102812	3300001431	Soil	APPLVIEPPQIEQIGERLEQALDDVSIELKNEGSLR*
JGI12053J15887_101814423	3300001661	Forest Soil	APPLVIEPFDIEEIGIRLGRALDDVAKDLKCERKTH*
Ga0066398_100575541	3300004268	Tropical Forest Soil	VVGDRLVFAPPLVIEAAEIEDVGERLKRALDDVAQDLGREGAMR*
Ga0066395_108580071	3300004633	Tropical Forest Soil	NDRLVFAPPLVIESEDIEEIGQRLERALDAVAGDLEEHISR*
Ga0066388_1076806792	3300005332	Tropical Forest Soil	LVRVIGDRLVFAPPLVIEAADIEDIAARLHRALNDVADDLAREGALG*
Ga0070668_1012247682	3300005347	Switchgrass Rhizosphere	LVFAPPLIIEEAEIEEIARRLKLGLDDVAKELKSEGALN*
Ga0070673_1015013342	3300005364	Switchgrass Rhizosphere	LRVVGDRLVFAPPLVVEPLQIELIGERLEQALDDVAIELKNESS*
Ga0070714_1005968283	3300005435	Agricultural Soil	RLVFAPPLVIEPSDIEEIGSRLERALYDVAKDLKHERKIH*
Ga0070713_1003019043	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RLVFAPPLVIETGEIEDVSARLERALDDVAADLGREGAVR*
Ga0070706_1001791852	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VGDRLVFAPPLVIETAEIEDVSERLERALDDVADDLGREGASR*
Ga0070699_1000984594	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RLVFAPPLVIETAEIEDVSERLERALDDVADDLGREGASR*
Ga0066700_100170911	3300005559	Soil	VFAPPLVIETTEIEDVSERLERALDDVADDLGREGALR*
Ga0066691_102414203	3300005586	Soil	PLVIETGEIEDVSARLERALDDVAADLGREGAVR*
Ga0070702_1012881431	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VGDRLVFAPPLIIEEAEIEEIARRLKLGLDDVAKELKSEGALN*
Ga0066905_1008212012	3300005713	Tropical Forest Soil	LILRVVGDRLVFAPPLVIEPPQIELISERLEQALDDVAIELKNDGSL*
Ga0066905_1009494772	3300005713	Tropical Forest Soil	RVVGDRLVFAPPLVIEAAEIEDVSARLERALDDVAEDLRRERALP*
Ga0068858_1013054021	3300005842	Switchgrass Rhizosphere	RVVGDRLVFAPPLVVEPLQIELIGERLEQALDDVAIELKNESS*
Ga0070717_106377442	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LAFAPPLVIEAHEIEDIGERLRRALDDVLTELKGEGALQ*
Ga0075017_1016858651	3300006059	Watersheds	IGDRLVFAPPLVIESHDIDEISKRLERALDDVARDLKEDMLS*
Ga0070716_1000470394	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VFAPPLVIEAAEIEDIAARLHRALNEVADDLTREGALR*
Ga0070712_1009298792	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VFAPPLVIEAAEIEDIAARLHRALNEVADDLTREGALG*
Ga0070765_1002635283	3300006176	Soil	DRLVFAPPLIIEATEIEEIGARLERALDDVSDELTREGAWR*
Ga0075431_1014121692	3300006847	Populus Rhizosphere	FAPPLVIEASEIEDISARLERALDDVADDLKREGALG*
Ga0075426_105257821	3300006903	Populus Rhizosphere	VIGDRLVFAPPLVIEAADIEDIAARLEHALNDVADDLAREGALG*
Ga0075426_112659542	3300006903	Populus Rhizosphere	VFAPPLVIEPPQIEQIGERLEQALDDVSIELKNEGSLR*
Ga0105249_108900022	3300009553	Switchgrass Rhizosphere	VFAPPLVIEPPQIELIGERLEQALDDVAIELKNESS*
Ga0126382_100030431	3300010047	Tropical Forest Soil	DRLVFAPPLVIEPPQVELIGERLERALDDVAIELKNEGSL*
Ga0126382_101405774	3300010047	Tropical Forest Soil	LVFAPPLVIEAAEIEDVGERLERALDDVAQDLGREGAMR*
Ga0126373_111953851	3300010048	Tropical Forest Soil	VFAPPLVIEAAEIEDVSERLERALDDVAADLAREGALR*
Ga0126370_111784541	3300010358	Tropical Forest Soil	RVVGDRLVFAPPLVIEAAEIEDVGERLERALDDVAQDLGREGVVR*
Ga0126376_114631061	3300010359	Tropical Forest Soil	APPLIIEAHEIEDIGARLRRALDDVFTELKSEGALD*
Ga0126378_102444943	3300010361	Tropical Forest Soil	LVFAPPLVIEAAEIEDVSERLERALDDVAADLAREGALR*
Ga0126378_118881191	3300010361	Tropical Forest Soil	PPLVIEPPQIEQIGERLELALDDVAIELKNEGSLR*
Ga0126377_112889071	3300010362	Tropical Forest Soil	RLVFAPPLVIETGEIEDVSARLERALNDVAADLGREGAVR*
Ga0126383_103190391	3300010398	Tropical Forest Soil	PLVIEAADIEDIAARLERALNDVADDLAREGALG*
Ga0126383_103447463	3300010398	Tropical Forest Soil	LRVVGDRLVFAPPLVIEAAEIEDVSARLERALDDVAEDLRHERALP*
Ga0126383_114921052	3300010398	Tropical Forest Soil	LIRVVGDRLVFAPPLVIEAAEIEDVSARLERALDDVAQDLGREGVVR*
Ga0137363_102184973	3300012202	Vadose Zone Soil	PLVIEAAEIEDVSERLKRALDDVAQDLGREGAVR*
Ga0137363_111667033	3300012202	Vadose Zone Soil	RLVFAPPLVIEAEDIEAIGERLERALDDVADELTREGALG*
Ga0137374_107833893	3300012204	Vadose Zone Soil	LRVVGDRLVFAPPLVIEASEIEDISARLERALDDVADDLKREGALE*
Ga0137372_104436783	3300012350	Vadose Zone Soil	GDRLVFAPPLVIEASEIEDISARLERALDDVADDLKREGALE*
Ga0137384_104794431	3300012357	Vadose Zone Soil	APPLVIEAAEIEDVSARLERALDDVAADLGREGALR*
Ga0137384_110281061	3300012357	Vadose Zone Soil	LVFAPPLVIEASEIEDISTRLERALDDVADDLKREGALG*
Ga0137360_112058922	3300012361	Vadose Zone Soil	RVVGDRLVFAPPLVIEAAEIEEIGERLERGLDDVADELSREGVSG*
Ga0126375_108124321	3300012948	Tropical Forest Soil	LVFAPPLIIEAYEIEQLGERLERALDDVATELKREGALA*
Ga0164303_109422771	3300012957	Soil	PPLVIEAAEIEDIAARLHRALNEVADDLTREGALR*
Ga0164302_110829052	3300012961	Soil	LFLRTVGDRLVFAPPLIIEASDIEEIAKRLKLGLDDVAKELKSEGVLV*
Ga0126369_103589453	3300012971	Tropical Forest Soil	PPLVIEAADIEDIAARLERALNDVADDLAREGALG*
Ga0157374_113110642	3300013296	Miscanthus Rhizosphere	VFAPPLVVEPLQIELIGERLEQALDDVAIELKNESS*
Ga0075312_10474873	3300014254	Natural And Restored Wetlands	DRLVLAPPLVIEEDDIAEIGTRLARALDDVADDLRSDGAFA*
Ga0132258_110363324	3300015371	Arabidopsis Rhizosphere	RLVFAPPLIIEPAEIEEIGERLERALDDVAGDLAREGIFK*
Ga0132256_1000978484	3300015372	Arabidopsis Rhizosphere	VVGDRLVFAPPLVIEAHEIEEIGQRLQRALDDVAGDLKSEGRLA*
Ga0132257_1029559822	3300015373	Arabidopsis Rhizosphere	LVFAPPLVIEAHEIEEIGQRLQRALDDVARDLKSEGRLA*
Ga0132255_1000409041	3300015374	Arabidopsis Rhizosphere	PPLVIEAADIEDIAARLHRALNDVADDLAREGALG*
Ga0132255_1007223504	3300015374	Arabidopsis Rhizosphere	PLVIETHEIEEIGKRLQRALDDVAGELKGEGCFA*
Ga0182041_102059992	3300016294	Soil	LVFAPPLVIESQDIDEIRQRLEQALDDVASDLTENDLM
Ga0182035_101719711	3300016341	Soil	RVVGDRLVFAPPLVIEAPEVEEIGERLECALDDVAGELTQEGALA
Ga0182032_102650861	3300016357	Soil	RVIGDRLVFAPPLVIEAHEIEDIGERLRRALDDVLTELNGEGALQ
Ga0182034_113668612	3300016371	Soil	FAPPLVIEAHEIEDIGERLRRALDDVLTELNGEGALQ
Ga0182040_109971321	3300016387	Soil	GDRLVFAPPLVIEAEEIEEISERLERALDDVAQDLKREGALN
Ga0182037_104897063	3300016404	Soil	DRLVFAPPLVIEAAEIEDISQRLERALDDVADDLKREGALG
Ga0182039_109042502	3300016422	Soil	VFAPPLIIEAQEIDEIGRRLQWALDDVASDLQSERHTQPI
Ga0182038_102070841	3300016445	Soil	IRVVCDRLVFAPPVVIEAAEIEGVGERLERALDDVAQDLGREGAVR
Ga0182038_102256992	3300016445	Soil	FAPPLIIEASEIEEIAARLERALDDVADELTREGAWR
Ga0187779_105557503	3300017959	Tropical Peatland	VGDRLVFAPPLVIEAQEIEEIGRRLHRALDDVAMDLKNERALQ
Ga0187784_112712081	3300018062	Tropical Peatland	LRVVGDRLVFAPPLVIEAEDIAEIGRRLERALDDVAADLRREGAS
Ga0190265_128594211	3300018422	Soil	LHRRVEVVAPPLVIEADEIEEIGVRLERALDDVAEDLEREGVFA
Ga0210407_111673882	3300020579	Soil	DRLVFAPPLVIEAHEIEDIGERLRRALDDVLTELKREGALQ
Ga0126371_109952821	3300021560	Tropical Forest Soil	VIGDRLVFAPPLVIEAEEITEIGRRLGRALNDVAKDLKSEGVL
Ga0207700_114045303	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	FAPPLVIEAAEIEDIAARLHRALNEVADDLTREGALR
Ga0207664_105243011	3300025929	Agricultural Soil	RLVFAPPLVIEPSDIEEIGSRLERALYDVAKDLKHERKIH
Ga0207838_1043171	3300026852	Tropical Forest Soil	PPLVIEASEIEEIGERLERALDDVARDLGREAALR
Ga0209329_11364022	3300027605	Forest Soil	LVFAPPLVIETTEIEAVGERLEHALDDVAADLGREGALR
Ga0318541_100610981	3300031545	Soil	IGDRLVFAPPLVIEAHEIEDIGERLRRALDDVLTELNGEGALQ
Ga0318528_104273562	3300031561	Soil	GDRLVFAPPLIIESEDIEEISQRLERALDDVARDLERLSI
Ga0318528_107257042	3300031561	Soil	LLRVVGDRLVFAPSLVIETGEIEDVSARLERALDDVAADLKREGALR
Ga0310915_106345091	3300031573	Soil	GDRLVFAPPLVIEAAEIEAVSERLERAFDDVADDLGREGALR
Ga0318555_105650292	3300031640	Soil	LVFAPPLVIETAEIEDVSERLERALDDVAADLAREGALR
Ga0318561_100468513	3300031679	Soil	IRVVGDRLVFAPPVVIEAAEIEGVGERLERALDDVAQDLEREGAVR
Ga0306917_108466781	3300031719	Soil	GDCLVFAPPLVIESHDIDEIGQRLERALDDVARDLKEDDIR
Ga0318500_101202631	3300031724	Soil	APPLIIEAHEIEEIGQRLERALDDVAIDLKREGALSQELAQYRS
Ga0306918_101381102	3300031744	Soil	IGDRLVFAPPLVIEAEEITEISRRLGRALDDVAKDLKSEGVL
Ga0318502_102768291	3300031747	Soil	APPLVIEAAEIEDISQRLERALDDVADDLKREGALG
Ga0318552_107380522	3300031782	Soil	LRVVGDRLVFAPPLVIETGEIEDVSARLERALDDVAADLKREGALR
Ga0318557_102901261	3300031795	Soil	VGDRLVFAPPLIIEAHEIEEIGQRLERALDDVAIDLKREGALSQELAQYRS
Ga0318517_100869552	3300031835	Soil	LRVVGDRLVFAPPLVIESQDIDEIRQRLEQALDDVASDLTENDLM
Ga0318495_101432481	3300031860	Soil	LIRVVGDRLVFAPPVVIEAAEIEGVGERLERALDDVAQDLEREGAVR
Ga0306919_102167731	3300031879	Soil	FAPPLVIEAAEIEDISQRLERALDDVADDLKREGALG
Ga0306925_105931861	3300031890	Soil	VVGDGWVIEAHEIEGIGERLRRALDDVLTELKGEGALQ
Ga0318536_103124722	3300031893	Soil	LILRVVGDRLVFAPPLVIEPDDIEQIGSRLDRALGDVTQDLRGEGVLN
Ga0318520_109039601	3300031897	Soil	RLVFAPPLVIESHEIDEIGQRLERALDDVARDLKEDDIR
Ga0306923_100923854	3300031910	Soil	VFAPPLVIEAAEIEDVGERLERALDDVAQDLGREGVVR
Ga0306923_125116512	3300031910	Soil	PPLVIEAEEIEEISERLERALDDVAQDLKREGALN
Ga0306921_107575991	3300031912	Soil	MFALPLIIEAFEIEEIAARLERALDDVANELMREGALGCAFSSYH
Ga0310916_113240712	3300031942	Soil	LVFAPPLVIEAHEIEGIGERLRRALDDVLTELKGEGALQ
Ga0310913_111250733	3300031945	Soil	IIRVIGDRLVFAPPLIIESEDIEEISQRLERALDDVARDLERLSI
Ga0306926_100917041	3300031954	Soil	DRLVFAPPLVIESQDIDEIRQRLEQALDDVASDLTENDLM
Ga0306926_102644231	3300031954	Soil	RVIGDRLVFAPPLIIESEDIEEISQRPERALDDVARDLE
Ga0318569_102265741	3300032010	Soil	VGDRLVFAPPLVIEAGEIEDVSARLERALDDVAADLGREGVLR
Ga0318506_100662312	3300032052	Soil	RLVFAPPLVIEAAEIEGVGERLERALDDVAQDLGREGAVR
Ga0318513_100234171	3300032065	Soil	DRLVFAPPLVIESHDIDEIGQRLERALDDVARDLKEDDLR
Ga0306924_111267921	3300032076	Soil	DRLVFAPPLIIESEDIEEISQRLERALDDVARDLERLSI
Ga0306924_125778501	3300032076	Soil	DRLVFAPPLVIETGEIEDVSARLERALDDVAADLGREGVVR
Ga0306920_1002960961	3300032261	Soil	IGDRLVFAPPLIIESEDIEEISQRPERALDDVARDLE
Ga0310914_110557083	3300033289	Soil	RLVFAPPLVIEAAEIEDISQRLERALDDVADDLKREGALG

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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