NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F087636

Metagenome / Metatranscriptome Family F087636

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F087636
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 83 residues
Representative Sequence KKGIKREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEDRFVFLKERVLADRLHPTRTPSLKLAF
Number of Associated Samples 81
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 17.27 %
% of genes from short scaffolds (< 2000 bps) 10.91 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (81.818 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(33.636 % of family members)
Environment Ontology (ENVO) Unclassified
(61.818 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(63.636 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 65.06%    β-sheet: 0.00%    Coil/Unstructured: 34.94%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF01361Tautomerase 12.73
PF01209Ubie_methyltran 6.36
PF06271RDD 4.55
PF04261Dyp_perox 2.73
PF13847Methyltransf_31 2.73
PF00561Abhydrolase_1 2.73
PF00582Usp 1.82
PF01256Carb_kinase 1.82
PF07884VKOR 0.91
PF12697Abhydrolase_6 0.91
PF07690MFS_1 0.91
PF04945YHS 0.91
PF03795YCII 0.91
PF00127Copper-bind 0.91
PF12698ABC2_membrane_3 0.91
PF13649Methyltransf_25 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG1942Phenylpyruvate tautomerase PptA, 4-oxalocrotonate tautomerase familySecondary metabolites biosynthesis, transport and catabolism [Q] 12.73
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 6.36
COG22272-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylaseCoenzyme transport and metabolism [H] 6.36
COG1714Uncharacterized membrane protein YckC, RDD familyFunction unknown [S] 4.55
COG2837Periplasmic deferrochelatase/peroxidase EfeBInorganic ion transport and metabolism [P] 2.73
COG0063NAD(P)H-hydrate repair enzyme Nnr, NAD(P)H-hydrate dehydratase domainNucleotide transport and metabolism [F] 1.82
COG0351Hydroxymethylpyrimidine/phosphomethylpyrimidine kinaseCoenzyme transport and metabolism [H] 1.82
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.91
COG4243Vitamin K epoxide reductase (VKOR) family protein, predicted involvement in disulfide bond formationGeneral function prediction only [R] 0.91


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A81.82 %
All OrganismsrootAll Organisms18.18 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002561|JGI25384J37096_10139871All Organisms → cellular organisms → Archaea785Open in IMG/M
3300002908|JGI25382J43887_10090874All Organisms → cellular organisms → Archaea1627Open in IMG/M
3300005554|Ga0066661_10301215All Organisms → cellular organisms → Archaea987Open in IMG/M
3300005559|Ga0066700_10313134All Organisms → cellular organisms → Archaea1107Open in IMG/M
3300006046|Ga0066652_100045024All Organisms → cellular organisms → Archaea3284Open in IMG/M
3300009038|Ga0099829_10177405All Organisms → cellular organisms → Archaea1713Open in IMG/M
3300009090|Ga0099827_10176847All Organisms → cellular organisms → Archaea1762Open in IMG/M
3300010322|Ga0134084_10003500All Organisms → cellular organisms → Archaea3560Open in IMG/M
3300012201|Ga0137365_10002158All Organisms → cellular organisms → Archaea15578Open in IMG/M
3300012207|Ga0137381_10261860All Organisms → cellular organisms → Archaea1504Open in IMG/M
3300012209|Ga0137379_10242729All Organisms → cellular organisms → Archaea1715Open in IMG/M
3300012210|Ga0137378_10445238All Organisms → cellular organisms → Archaea1200Open in IMG/M
3300012975|Ga0134110_10028215All Organisms → cellular organisms → Archaea2187Open in IMG/M
3300018482|Ga0066669_10290592All Organisms → cellular organisms → Archaea1320Open in IMG/M
3300026330|Ga0209473_1009268All Organisms → cellular organisms → Archaea4944Open in IMG/M
3300026331|Ga0209267_1174165All Organisms → cellular organisms → Archaea860Open in IMG/M
3300026342|Ga0209057_1122840All Organisms → cellular organisms → Archaea965Open in IMG/M
3300027846|Ga0209180_10012809All Organisms → cellular organisms → Archaea4360Open in IMG/M
3300027882|Ga0209590_10059642All Organisms → cellular organisms → Bacteria2159Open in IMG/M
3300032180|Ga0307471_100154744All Organisms → cellular organisms → Archaea2213Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil33.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil26.36%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil20.00%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil15.45%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.82%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.91%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010106Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010122Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010896Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012372Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012383Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012395Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026342Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)EnvironmentalOpen in IMG/M
3300026480Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-BEnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1017863723300002558Grasslands SoilRFEDVVKTLMERLGSSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLHPTTPSLRFPT*
JGI25384J37096_1001525213300002561Grasslands SoilFEDVVKTLTERLGTSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLHPTTPSLRFPA*
JGI25384J37096_1013987123300002561Grasslands SoilRDDIPARFGDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
JGI25382J37095_1009283433300002562Grasslands SoilREDIPGRFEDVVKTLTERLGSSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLHPTTPSLRFPT*
JGI25382J37095_1026546313300002562Grasslands SoilIPARFGDVVKILHERLGTSARVIAYRTMVELYKEFSLNANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
JGI25382J43887_1009087443300002908Grasslands SoilRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
JGI25617J43924_1025904123300002914Grasslands SoilDFLDKKGIKREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEERFVFLKERVLADRLHPTRTPSLKLAF*
Ga0066674_1049750913300005166SoilGIKRDDIPARFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0066690_1015576513300005177SoilFLSKKGINREDIPGRFEDVVKTLTERLGTSARVIAYRTVVELYKEFALPANFEYDDSLPDRFVYLRERVVADRLHPTTPSLRFPA*
Ga0066686_1038689123300005446SoilRDWVYDFLEKKGISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLKERVLADRLHPTRTPSLKLAF*
Ga0066682_1085922013300005450SoilKRDDIPARFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0066697_1014039213300005540SoilIRDWVYDFLDKKGIKRDDIPARFGDVVKILHERLGTSARVIAYRTMVELYKEFSLNANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0066697_1062124413300005540SoilIRDWVYDFLEKKGISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLHPTRTPSLKLAF*
Ga0066661_1030121523300005554SoilPGRFEDVVKTLMERLGTSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLRPTTPSLRFPT*
Ga0066704_1061451513300005557SoilEDVVKILHERLGTSARVIAYRTMVELYKEFSLNANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0066704_1061614913300005557SoilFLSKKGINREDIPGRFEDVVKTLMERLGASARVIAYRTVVELYKEFALPQNFEYDDSLLDRFVYLKERVVADRLHPTTPSLRFPA*
Ga0066698_1013114413300005558SoilDKKGIRREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0066700_1031313413300005559SoilIPARFADVVKILHERLGTSARVIAYRTMVELYKEFSLNANFDYEDSIEDRFIFLKERVLADRLHPTRTPSLKLAF*
Ga0066703_1054634313300005568SoilDWVYDFLDKKGIKRDDIPARFEDVVKILHERLGTSARVIAYRTMVELYKEFSLTANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0066706_1143826013300005598SoilIPARFADVVKILHERLGTSARVIAYRTMVELYKEFSLNANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0066652_10004502413300006046SoilDDIPARFGDVVKILHERLGTSARVIAYRTMVELYKEFSLNANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0070716_10087896423300006173Corn, Switchgrass And Miscanthus RhizosphereYDFLSKKGISREDIPGRFEDVVKTLTERLGTSARVIAYRTVIELYKEFALPPNFEYDDSLPDRFVYLKERVVSDRLHPTTPSLRFPT*
Ga0066665_1055043913300006796SoilMGPIRDWVYDFLEKKGISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLHPTRTPSLKLAF*
Ga0079220_1106273123300006806Agricultural SoilIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLGF*
Ga0099793_1063657423300007258Vadose Zone SoilSKKGISREDIPGRFEDVVKTLMERLGTSARVIAYRTVVELYKEFELPPNFDYDDSLPDRFVYLKERVVSDRLHPTTPSLRFPT*
Ga0099793_1069839023300007258Vadose Zone SoilEDIPGRFEDVVKTLMERLGTSARVIAYRTMVELYKEFALPPNFDYDDSLPDRFVYLKERVVTDRLHPTTPSLRFPA*
Ga0099794_1036830223300007265Vadose Zone SoilIKREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0066710_10022885713300009012Grasslands SoilKKGISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLKERVLADRLHPTRTPSLKLAF
Ga0099829_1017740543300009038Vadose Zone SoilREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0099829_1054320133300009038Vadose Zone SoilYDFLGKRGISREDIPGRFEDVVKILQERLGTSARVIAYRTMVELYKEFSLTATFDYDDSLPDRFIFLKERVLADRLHPTRTLSLRLAF*
Ga0099829_1063911623300009038Vadose Zone SoilREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEERFVFLKERVLADRLHPTRTPSLKLAF*
Ga0099830_1035762823300009088Vadose Zone SoilKKGIKREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEERFVFLKERVLADRLHPTRTPSLKLAF*
Ga0099830_1057113113300009088Vadose Zone SoilKKGIKREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0099828_1085061313300009089Vadose Zone SoilLSKKGIGREDIPGRFEDVVKTLTERLGTSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLHPTTPSLRFPT*
Ga0099828_1136663313300009089Vadose Zone SoilDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0099827_1017684743300009090Vadose Zone SoilPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0066709_10291482313300009137Grasslands SoilDWVYDFLDKKGIKRDDIPARFADVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0127472_112438723300010106Grasslands SoilDWVYDFLEKKGISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLHPTRTPSLKLAF*
Ga0127488_106587323300010122Grasslands SoilDFLEKKGISREDIPTRFEDVVKILLERLGTSARVIAYSTMVELYKEFSLSADFDYDDSLPEKFVFLKERVLADRLHPTRTPSLKLAF*
Ga0134088_1006353913300010304Grasslands SoilSREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLHPTRTPSLKLAF*
Ga0134088_1040974223300010304Grasslands SoilFLDKKGIKREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0134084_1000350063300010322Grasslands SoilDKKGVKRDDIPARFGDVVKILHERLGTSARVIAYRTMVELYKEFSLTANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0134063_1065692013300010335Grasslands SoilTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLRPTRTPSLKLAF*
Ga0134071_1017225113300010336Grasslands SoilIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLHPTRTPSLKLAF*
Ga0138111_109727513300010896Grasslands SoilPIRDWVYDFLEKKGISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLRPTRTPSLKLAF*
Ga0137391_1144866223300011270Vadose Zone SoilLDKKGIKREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0137389_1011613543300012096Vadose Zone SoilDWVYDFLDKKGIKREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEERFVFLKERVLADRLHPTRTPSLKLAF*
Ga0137383_1057616813300012199Vadose Zone SoilGIKRDDIPARFGDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0137365_1000215843300012201Vadose Zone SoilMGPIRDWVYDFLEKKGIAREDIPSRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFEYDDSLPEKFIFLKERVLADRLHPTRTPSLKLAF*
Ga0137365_1127701113300012201Vadose Zone SoilMGGPIRDWVYDFLDKKGIKRDDIPARFEDVVKILHERLGTSARVCAYRTMLELYKGFSLRANFGDEDCIEDRFVFLKERV
Ga0137374_1047484423300012204Vadose Zone SoilMGPIRDWVYDFLGKKGISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPERFVFLKERVLADRLHPTRTPSLKLAF*
Ga0137380_1107793113300012206Vadose Zone SoilRFEEVVKILLERLGTSARVIAYRTMVELYKEFSLSANFDYDDSLTDRFVFLKERVLMDRLHPTRTPSLRLAS*
Ga0137381_1026186013300012207Vadose Zone SoilRDDIPARFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0137381_1176245013300012207Vadose Zone SoilLSKKGISREDIPGRFEDVVKTLMERLGTSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVSDRLHPTTPSLRFPT*
Ga0137379_1024272913300012209Vadose Zone SoilREDIPGRFEDVVKTLMERLGTSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLHPTTPSLRFPS*
Ga0137379_1111633213300012209Vadose Zone SoilRDDIPARFEDVVKILHERLGTSARVIAYRTMVELYKEFSLNANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0137378_1025006513300012210Vadose Zone SoilGISREDIPSRFEDVVKTLMERLGSSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLHPTTPSLRFPT*
Ga0137378_1044523813300012210Vadose Zone SoilDFLDKKGIKRDDIPARFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0137378_1172820513300012210Vadose Zone SoilDKKGIKRDDIPARFGDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0137369_1070174723300012355Vadose Zone SoilDWVYDFLEKKGINRGDIPVRFEEVVKILLERLGTSARVIAYRTVVELYNEFSLSANFDYDDSLTDRFVFLKERVLMDRLHPTRTPSLRLAS*
Ga0137385_1056497513300012359Vadose Zone SoilIRDWVYDFLDKKGIKRDDIPARFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0137385_1160449613300012359Vadose Zone SoilIYDFLSKKGISREDIPGRFEDVVKTLMERLGTSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVSDRLHPTTPSLRFPT*
Ga0137360_1057067823300012361Vadose Zone SoilEDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEDRFVFLKERVLADRLHPTRTPSLKLDF*
Ga0134037_113338613300012372Grasslands SoilRDWVYDFLEKKGISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLHPTRTPSLKLAF*
Ga0134033_113370523300012383Grasslands SoilPIRHWVYDFLEKKGISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLHPTRTPSLRLAF*
Ga0134044_102593413300012395Grasslands SoilKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLRPTRTPSLKLAF*
Ga0137419_1052041913300012925Vadose Zone SoilFLNKKGIGREDIPGRFEDVVKTLLERLGTSARVIAYRTMVELYKEFALPPNFDYDDSLPDRFVYLKERVVADRLHPTTPSLRFPT*
Ga0134077_1013317233300012972Grasslands SoilVYDFLEKKGISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLHPTRTPSLKLAF*
Ga0134110_1002821513300012975Grasslands SoilFLNKKGISREDIPGRFEDVVKTLMERLGSSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLHPTTPSLRFPA*
Ga0134110_1032623513300012975Grasslands SoilMGGPIRDWVYDFLDKKGIKRDDIPARFADVVKILHERLGTSARVIAYRTMVELYKEFSLNANFDYEDSIEDRFVFLKERVLADRLHPT
Ga0134110_1043279613300012975Grasslands SoilGIKRDDIPARFGDVVKILHERLGTSARVIAYRTMVELYKEFSLNANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0134081_1000320313300014150Grasslands SoilKGISREDIPGRFEDVVKTLMERLGSSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLHPTTPSLRFPA*
Ga0134075_1029837423300014154Grasslands SoilISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLHPTRTPSLKLAF*
Ga0137418_1086188513300015241Vadose Zone SoilGIKREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEDRFVFLKERVLADRLHPTRTPSLKLAF*
Ga0134085_1005280443300015359Grasslands SoilISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLKERVLADRLHPTRTPSLKLAF*
Ga0134069_102168813300017654Grasslands SoilIRDWVYDFLEKKGISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLRPTRTPSLKLAF
Ga0134112_1013790733300017656Grasslands SoilPIRDWVYDFLDKKGIKRDDIPARFGDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF
Ga0134112_1051001223300017656Grasslands SoilDKKGIKREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEDRFVFLKERVLADRLHPTRTPSLKLAF
Ga0134074_127717713300017657Grasslands SoilMGPIRDWVYDFLEKKGISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLRPTRTPSLKLAF
Ga0066655_1108920613300018431Grasslands SoilISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLRPTRTPSLKLAF
Ga0066662_1024799613300018468Grasslands SoilEDIPGRFEDVVKTLMERLGSSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLHPTTPSLRFPT
Ga0066662_1146336613300018468Grasslands SoilKRDDIPARFGDVVKILNERLGTSARVIAYRTMVELYKEFSLNANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF
Ga0066662_1232726023300018468Grasslands SoilFLNKKGISREDIPGRFEDVVKTLMERLGSSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLRPTTPSLRFPA
Ga0066669_1029059233300018482Grasslands SoilEWIYDFLNKKGISREDIPSRFEDVVKTLMERLGSSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLHPTTPSLRFPA
Ga0066669_1169986013300018482Grasslands SoilPIRDWVYDFLDKKGIKRDDIPARFGDVVKILHERLGTSARVIAYRTMVELYKEFSLNANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF
Ga0209235_110528613300026296Grasslands SoilGRFEDVVKTLMERLGSSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLRPTTPSLRFPT
Ga0209236_113984423300026298Grasslands SoilDKKGIKRDDIPARFADVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF
Ga0209471_100196113300026318SoilDDIPARFADVVKILHERLGTSARVIAYRTMVELYKEFSLNANFDYEDSIEDRFIFLKERVLADRLHPTRTPSLKLAF
Ga0209801_130658423300026326SoilDWIYDFLSKKGISREDIPGRFEDVVKTLMERLGSSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLHPTTPSLRFPT
Ga0209473_100926893300026330SoilWIYDFLNKKGISREDIPGRFEDVVKTLMERLGSSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLHPTTPSLRFPA
Ga0209267_117416513300026331SoilIRDWVYDFLDKKGIKRDDIPARFEDVVKILHERLGTSARVIAYRTMVELYKEFSLTANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF
Ga0209158_120569213300026333SoilLDKKGIKRDDIPARFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF
Ga0209377_123532013300026334SoilRDWIYDFLSKKGISREDIPGRFEDVVKTLMERLGSSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLHPTTPSLRFPT
Ga0209057_112284013300026342SoilWIYDFLSKKGISREDIPGRFEDVVKTLMERLGTSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLRPTTPSLRFPA
Ga0257177_101469033300026480SoilPGRFEDVVKTLMERLGTSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLRERVVADRLHPTTPSLRFPA
Ga0209808_1002046153300026523SoilKKGIKRDDIPARFADVVKILHERLGTSARVIAYRTMVELYKEFSLNANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF
Ga0209806_108399913300026529SoilDKKGIKRDDIPARFGDVVKILHERLGTSARVIAYRTMVELYKEFSLTANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF
Ga0209806_109833213300026529SoilDKKGIKRDDIPARFEDVVKILHERLGTSARVIAYRTMVELYKEFSLTANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF
Ga0209806_123921223300026529SoilDKKGIKRDDIPARFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADRLHPTRTPSLKLAF
Ga0209058_102574473300026536SoilGISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLHPTRTPSLKLAF
Ga0209058_114445413300026536SoilGISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLRPTRTPSLKLAF
Ga0209376_114144713300026540SoilIRDWVYDFLEKKGISREDIPTRFEDVVKILLERLGTSARVIAYRTMVELYKEFSLSADFDYDDSLPEKFVFLRERVLADRLHPTRTPSLKLAF
Ga0209180_1001280983300027846Vadose Zone SoilGIKREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLTANFDYEDSLEDRFVFLKERVLADRLHPTRTPSLKLAF
Ga0209180_1002580143300027846Vadose Zone SoilMTSDKKGIKREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEERFVFLKERVLADRLHPTRTPSLKLAF
Ga0209180_1054970413300027846Vadose Zone SoilKREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEERFVFLKERVLADRLHPTRTPSLKLAF
Ga0209283_1075112213300027875Vadose Zone SoilIPGRFEDVVKTLMERLGSSARVIAYRTVVELYKEFALPPNFEYDDSLPDRFVYLKERVVADRLHPTTPSLRFPA
Ga0209283_1088027623300027875Vadose Zone SoilISREDIPGRFEDVVKTLMERLGTSARVIAYRTVVELYKEFALPPNFDYDDSLPDRFVYLKERVVSDRLHPTTPSLRFPA
Ga0209590_1005964213300027882Vadose Zone SoilIKREDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSLEERFVFLKERVLADRLHPTRTPSLKLAF
Ga0307471_10007881513300032180Hardwood Forest SoilDKKGIKRDDIPSRFEDVVKILHERLGTSARVIAYRTMVELYKEFSLSANFDYEDSIEDRFVFLKERVLADKLHPTRTPSLKLGF
Ga0307471_10015474413300032180Hardwood Forest SoilRDWVYDFLDKKGIKREDIPSRFEDVVKILHERLGTSARVIAFRTMVELYKEFSLSANFDYEDSLEDRFVFLKERVLADRLHPTRTPSLKLAF


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.