Metagenome Family F087600

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087600
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	42 residues
Representative Sequence	CPLLGDYLEEGEVARHATDRVAHDLMALMAQAPDRQTIRG
Number of Associated Samples	99
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.91 %
% of genes near scaffold ends (potentially truncated)	96.36 %
% of genes from short scaffolds (< 2000 bps)	88.18 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (12.727 % of family members)
Environment Ontology (ENVO)	Unclassified (37.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.636 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.12% β-sheet: 0.00% Coil/Unstructured: 55.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF12804	NTP_transf_3	81.82
PF05015	HigB-like_toxin	2.73
PF09900	DUF2127	1.82
PF02922	CBM_48	1.82
PF00892	EamA	1.82
PF01381	HTH_3	0.91
PF14559	TPR_19	0.91
PF14602	Hexapep_2	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	2.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.00 %
Unclassified	root	N/A	10.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	68.18 %
Unclassified	root	N/A	10.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	43.64 %
Unclassified	root	N/A	10.00 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.36 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.64 %
Unclassified	root	N/A	10.00 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.45 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.64 %
Unclassified	root	N/A	10.00 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.45 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.64 %
Unclassified	root	N/A	10.00 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.73 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.91 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.64 %
Unclassified	root	N/A	10.00 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.73 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.91 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.64 %
Unclassified	root	N/A	10.00 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1.82 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.91 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_11202245	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005471\|Ga0070698_101443512	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300005536\|Ga0070697_100187371	All Organisms → cellular organisms → Bacteria	1755	Open in IMG/M
3300005536\|Ga0070697_100395658	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300005575\|Ga0066702_10309937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	962	Open in IMG/M
3300005591\|Ga0070761_10890301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300005602\|Ga0070762_11068666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300006052\|Ga0075029_100281403	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300006059\|Ga0075017_100065935	All Organisms → cellular organisms → Bacteria	2461	Open in IMG/M
3300006059\|Ga0075017_101648955	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300006086\|Ga0075019_10707145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	637	Open in IMG/M
3300006102\|Ga0075015_100024589	All Organisms → cellular organisms → Bacteria	2699	Open in IMG/M
3300006174\|Ga0075014_100515198	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	671	Open in IMG/M
3300006174\|Ga0075014_100850743	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300007255\|Ga0099791_10361650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300009038\|Ga0099829_10071132	All Organisms → cellular organisms → Bacteria	2638	Open in IMG/M
3300009038\|Ga0099829_10501249	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300009143\|Ga0099792_10716845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300009519\|Ga0116108_1028646	Not Available	1853	Open in IMG/M
3300009520\|Ga0116214_1167006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	823	Open in IMG/M
3300009520\|Ga0116214_1169315	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300009521\|Ga0116222_1554177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300009524\|Ga0116225_1352952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300009629\|Ga0116119_1089754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300009632\|Ga0116102_1045353	Not Available	1401	Open in IMG/M
3300009634\|Ga0116124_1196974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300009640\|Ga0116126_1212140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300009644\|Ga0116121_1107472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300009645\|Ga0116106_1154718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300009764\|Ga0116134_1119518	All Organisms → cellular organisms → Bacteria → Acidobacteria	943	Open in IMG/M
3300009824\|Ga0116219_10355768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300009839\|Ga0116223_10384956	Not Available	827	Open in IMG/M
3300010339\|Ga0074046_10386818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300011269\|Ga0137392_10732914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	818	Open in IMG/M
3300011270\|Ga0137391_11294290	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300012202\|Ga0137363_10448490	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300012203\|Ga0137399_11133289	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	659	Open in IMG/M
3300012207\|Ga0137381_10900586	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300012208\|Ga0137376_10457137	All Organisms → cellular organisms → Bacteria → Acidobacteria	1108	Open in IMG/M
3300012209\|Ga0137379_11678945	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300012361\|Ga0137360_10333486	All Organisms → cellular organisms → Bacteria → Acidobacteria	1266	Open in IMG/M
3300012362\|Ga0137361_11307960	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300012923\|Ga0137359_10713653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300014152\|Ga0181533_1203083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300014155\|Ga0181524_10427584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300014162\|Ga0181538_10416883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300014169\|Ga0181531_10364712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300014169\|Ga0181531_10372010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300014169\|Ga0181531_11023762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300014495\|Ga0182015_10046561	All Organisms → cellular organisms → Bacteria	3201	Open in IMG/M
3300014498\|Ga0182019_10400068	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300017946\|Ga0187879_10625193	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300017946\|Ga0187879_10643036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300017955\|Ga0187817_10068314	All Organisms → cellular organisms → Bacteria	2209	Open in IMG/M
3300018004\|Ga0187865_1238550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300018017\|Ga0187872_10433254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300018022\|Ga0187864_10471846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300018026\|Ga0187857_10067160	Not Available	1793	Open in IMG/M
3300018086\|Ga0187769_10665689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300018090\|Ga0187770_10762863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300019787\|Ga0182031_1288746	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300020580\|Ga0210403_10365195	Not Available	1181	Open in IMG/M
3300021402\|Ga0210385_11138321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300021406\|Ga0210386_10560349	All Organisms → cellular organisms → Bacteria → Acidobacteria	987	Open in IMG/M
3300021474\|Ga0210390_10164219	Not Available	1874	Open in IMG/M
3300021477\|Ga0210398_11392883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300025419\|Ga0208036_1053845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300025500\|Ga0208686_1079777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300025507\|Ga0208188_1013817	All Organisms → cellular organisms → Bacteria	2517	Open in IMG/M
3300025576\|Ga0208820_1155721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300025922\|Ga0207646_10120223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2360	Open in IMG/M
3300025922\|Ga0207646_10324702	All Organisms → cellular organisms → Bacteria → Acidobacteria	1391	Open in IMG/M
3300026467\|Ga0257154_1063117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300027497\|Ga0208199_1055901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300027604\|Ga0208324_1108086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300027662\|Ga0208565_1017446	All Organisms → cellular organisms → Bacteria	2661	Open in IMG/M
3300027745\|Ga0209908_10178419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300027768\|Ga0209772_10069765	All Organisms → cellular organisms → Bacteria → Acidobacteria	1060	Open in IMG/M
3300027853\|Ga0209274_10129661	Not Available	1260	Open in IMG/M
3300028047\|Ga0209526_10361941	All Organisms → cellular organisms → Bacteria → Acidobacteria	970	Open in IMG/M
3300028069\|Ga0255358_1034238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300028566\|Ga0302147_10028495	All Organisms → cellular organisms → Bacteria	2023	Open in IMG/M
3300028731\|Ga0302301_1150446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300028780\|Ga0302225_10145093	Not Available	1151	Open in IMG/M
3300029920\|Ga0302142_1003659	All Organisms → cellular organisms → Bacteria	5193	Open in IMG/M
3300029922\|Ga0311363_10378323	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300030043\|Ga0302306_10420581	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300030520\|Ga0311372_10752240	All Organisms → cellular organisms → Bacteria → Acidobacteria	1346	Open in IMG/M
3300030580\|Ga0311355_10678240	Not Available	961	Open in IMG/M
3300030580\|Ga0311355_11863969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300030617\|Ga0311356_10400534	All Organisms → cellular organisms → Bacteria → Acidobacteria	1355	Open in IMG/M
3300030737\|Ga0302310_10732541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300030838\|Ga0311335_11424640	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300031233\|Ga0302307_10152867	All Organisms → cellular organisms → Bacteria → Acidobacteria	1197	Open in IMG/M
3300031234\|Ga0302325_12315822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300031712\|Ga0265342_10613042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300031718\|Ga0307474_10386103	All Organisms → cellular organisms → Bacteria → Acidobacteria	1088	Open in IMG/M
3300031820\|Ga0307473_10933876	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300031820\|Ga0307473_11186007	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300031902\|Ga0302322_101932321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300031962\|Ga0307479_11159366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300032180\|Ga0307471_100825817	All Organisms → cellular organisms → Bacteria → Acidobacteria	1094	Open in IMG/M
3300032805\|Ga0335078_10555429	All Organisms → cellular organisms → Bacteria → Acidobacteria	1460	Open in IMG/M
3300032828\|Ga0335080_10497232	Not Available	1295	Open in IMG/M
3300032829\|Ga0335070_10071453	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3727	Open in IMG/M
3300032893\|Ga0335069_10238710	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2193	Open in IMG/M
3300033805\|Ga0314864_0010499	Not Available	1791	Open in IMG/M
3300033829\|Ga0334854_001710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5321	Open in IMG/M
3300033983\|Ga0371488_0424048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300034091\|Ga0326724_0425174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.09%
Host-Associated	Host-Associated	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.18%
Aquatic	Environmental → Aquatic	30.91%
Plants	Host-Associated → Plants	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.91%
Freshwater	Environmental → Aquatic → Freshwater	24.55%
Peat	Environmental → Terrestrial → Peat	17.27%
Sediment	Environmental → Aquatic → Sediment	6.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	24.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	17.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.91%
Loam	Environmental → Terrestrial → Soil → Loam	8.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	17.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.73%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	10.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.64%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	10.91%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	9.09%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.18%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.55%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.73%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.82%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.82%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.82%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.91%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.91%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.91%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.91%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.91%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300025419	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025507	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027662	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028069	Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T0	Environmental	Open in IMG/M
3300028566	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2	Environmental	Open in IMG/M
3300028731	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300029920	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_3	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_112022451	3300004080	Bog Forest Soil	VDLEAIEALGVCPVLGDYLDEGDVARHATDHVAHDLMALMAQAPDRQTIRS*
Ga0070698_1014435121	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	IEALGVCPVLGDYLEEGETARHATDRVAHDLMALMAQAPDRQTIRS*
Ga0070697_1001873711	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ALGVCPLLGDYLDEGEVARHATERVAHDLMALMAQAPDRHSIPS*
Ga0070697_1003956581	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ALGVCPLLGDYLDEGEVARHATERVAHDLMALMAQAPDRQAASRR*
Ga0066702_103099372	3300005575	Soil	VLGDYLEEGETARHATDRVAHDLMVLMAQAPDRQTIRS*
Ga0070761_108903012	3300005591	Soil	CPVLGDYLDEGAVARHATDRVARDLMVLMAQMPDRQAIRD*
Ga0070762_110686662	3300005602	Soil	MGDYLDAGLVARHATDKIAHDLMALMAQSPERQPLRS*
Ga0075029_1002814031	3300006052	Watersheds	ALGVCPLLGEFLEEGAVVRHATDRVAHDLMALMARALDRQEIRS*
Ga0075017_1000659354	3300006059	Watersheds	AIRALGVCPLLGEFLEEGAVVRHATDRVAHDLMALMARAPDRQEIRS*
Ga0075017_1016489552	3300006059	Watersheds	AIRALGVCPLLGEFLEEGAVVRHATDRVAHDLMALMARALDRQEIRS*
Ga0075019_107071452	3300006086	Watersheds	VCPLLGEFLEEGAVVRHATDRVAHDLMALMARALDRQEIRS*
Ga0075015_1000245894	3300006102	Watersheds	FLEEGAVVRHATDRVAHDLMALMARALDRQEIRS*
Ga0075014_1005151981	3300006174	Watersheds	PLLGEFLEEGAVVRHATDRVAHDLMALMARALDRQEIRS*
Ga0075014_1008507431	3300006174	Watersheds	PLLGEFLEEGAVVRHATDRVAHDLMALMARAPDRQEIRS*
Ga0099791_103616501	3300007255	Vadose Zone Soil	ALGVCPLLGDYLDEGEVARHATERVAHDLMTLMAQSPDRHSIPR*
Ga0099829_100711321	3300009038	Vadose Zone Soil	EALGVCPILGDYLDEGEVARHATERVAHDLMALMGQTPDRQAASH*
Ga0099829_105012493	3300009038	Vadose Zone Soil	EALGVCPILGDYLDEGEVARHATERVAHDLMALMGQTPDRHSIPR*
Ga0099792_107168451	3300009143	Vadose Zone Soil	DYLDKGEVARHATDRVAGDLMALMAQAPDRHFASR*
Ga0116108_10286463	3300009519	Peatland	GGCPLLGEYLDEGEVARHATDRVAHDLMALMAQAPHGQTIRG*
Ga0116214_11670061	3300009520	Peatlands Soil	PVLGDYLEEGAVARHATDQVAHDLMALMAQAPHRQTMRG*
Ga0116214_11693152	3300009520	Peatlands Soil	DYLEEGEVARHATDRVAHDLMALMAQAPDRQTIRG*
Ga0116222_15541771	3300009521	Peatlands Soil	VDLEAIEALGLCPVLGDYLEEGEVARHATDRLAHDLMALMAQTPDRQTIRS*
Ga0116225_13529522	3300009524	Peatlands Soil	LCPVLGDYLEEGEVARHATDRLAHDLMALMAQTPDRQTIRS*
Ga0116119_10897542	3300009629	Peatland	VCPVLGDYLEEGAVARHATDHVAHDLMALMAQTPDRQTIRS*
Ga0116102_10453531	3300009632	Peatland	YLEEGAVARHATDRVAHDLMALMAQAPDRQPIRS*
Ga0116124_11969742	3300009634	Peatland	GVCPVQGEYLEEGAVARHATDRLAHDLMALMAQTPDRQTIRS*
Ga0116126_12121401	3300009640	Peatland	VCPVLGDYLEEGEVARHATDHVAHDLMALMAQAPVRQAIRS*
Ga0116121_11074721	3300009644	Peatland	LGVCPVLGDYLDEGEVARHATDHVAHDLMALMAQAPDRQTIRS*
Ga0116106_11547182	3300009645	Peatland	GDYLEEGEVARHATDRVAHDLMALMAQAPDRQTIRS*
Ga0116134_11195182	3300009764	Peatland	LGVCPLLGDYLEEGAVARHATDQVAHDLMALMAQAPDRQTIRG*
Ga0116219_103557681	3300009824	Peatlands Soil	PLLGDYLEEGEVARHATDRVAHDLMALMAQAPDRQTIRG*
Ga0116223_103849563	3300009839	Peatlands Soil	GDYLEEGAVARHAADRVAHDLMALMAQAPDRQTIRS*
Ga0074046_103868182	3300010339	Bog Forest Soil	LGVCPVLGDYLEEGAVARHATNRAAHDLMALMAQAPDRQTIRS*
Ga0137392_107329143	3300011269	Vadose Zone Soil	GDYLDEGEVARHATERVAHDLMALMGQTPDRHSIPL*
Ga0137391_112942903	3300011270	Vadose Zone Soil	VCPVQGDYLEEGETARHATDRVAHDLMALMAQAPDRQTIRS*
Ga0137363_104484903	3300012202	Vadose Zone Soil	EALGVCPLLGDYLDEGEVARHATERVAHDLMALMAQAPDRQAASRR*
Ga0137399_111332892	3300012203	Vadose Zone Soil	YLEEGKTARHATDRVAHDLMALMAQAPDRQTIRS*
Ga0137381_109005863	3300012207	Vadose Zone Soil	GDYLDEGEVARHATERVAHDLMALMAQAPDRHSISR*
Ga0137376_104571372	3300012208	Vadose Zone Soil	CPILGDYLDEGGVARHATDRVAQDLMALMAQAPDRQAPSRTES*
Ga0137379_116789451	3300012209	Vadose Zone Soil	PLLGDYLDEGEVARHATERVAHDLMALMAQAPDRHSISR*
Ga0137360_103334862	3300012361	Vadose Zone Soil	PLLGDYLDEGEVARHATERVAHDLMALMAQAPDRQAASRQ*
Ga0137361_113079603	3300012362	Vadose Zone Soil	LDEGEVARHATERVAHDLMALMAQAPDRQAASRQ*
Ga0137359_107136532	3300012923	Vadose Zone Soil	PVLGDYLEEGETARHATDRVAHDLMALMAQAPDRQTIRS*
Ga0181533_12030831	3300014152	Bog	PVMGDYLEEGAVARHASNQVAHDLMALMAQAPTGQTVRI*
Ga0181524_104275841	3300014155	Bog	VCPLLGEYLDEGEVARHATDRVAHDLMALMAQAPNGQTIRG*
Ga0181538_104168832	3300014162	Bog	LEAIEAIGVCPLLGEYLDEGEVARHATDRVAHDLMALMAQAPNGQTIRG*
Ga0181531_103647121	3300014169	Bog	VCPVLGDYLEEGEVARHATDRLAHDLMALMVRTQDRQTIRG*
Ga0181531_103720102	3300014169	Bog	LGDYLEEGTVARHATDRVAHDLMALMAQAPDRQSLRS*
Ga0181531_110237622	3300014169	Bog	GICPILGDYLDEEVVARHATDRVASDLMSLMAQTPDHHAASR*
Ga0182015_100465613	3300014495	Palsa	VLGEYLVEGAVARHATDRLAHDLMALMARTPDRQTIRS*
Ga0182019_104000682	3300014498	Fen	AIEALGVCPVLGDYLDEGAVARHATDRVAHDLMALMAQAPDRQSIRS*
Ga0187879_106251931	3300017946	Peatland	EKLGVCPVLGDYLEEGEVARHATDRVAHDLMAMMAQAPGRQTIRG
Ga0187879_106430362	3300017946	Peatland	AIEQLGVCPLLGDYLEEGAVARHATDHVAHDLMALMAQAPDGQTIRS
Ga0187817_100683143	3300017955	Freshwater Sediment	VLGDYLDEGVVARHATDRVAHDLMALMAQAPERQALPK
Ga0187865_12385501	3300018004	Peatland	IEALGVCPVLGDYLEEGEVARHAADRVAHDLMALMAQAPDRQTIRS
Ga0187872_104332542	3300018017	Peatland	VDLEAIETLGVCPVLGDYLDEGAVARHATDRIAHDLMALMAQAPDRQSIRS
Ga0187864_104718461	3300018022	Peatland	LGDYLEEGEVARHATDRVAHDLMALMAQAPDRQTIRS
Ga0187857_100671602	3300018026	Peatland	DYLEEGEVARHATDRVAHDLMALMAQAPDRQTIRS
Ga0187769_106656892	3300018086	Tropical Peatland	EAIEALGVCPVLGDYLDEGPVARHATDRVAHDLMALMAQAPEGHAAPK
Ga0187770_107628632	3300018090	Tropical Peatland	GDYLEEGAVARHATDRVAQDLMTLMAQTPDHHAAPR
Ga0182031_12887462	3300019787	Bog	VDLEAIEALGVCPLLGDYLDEGDVARHATDQVAHDLMALMAQAPKRQMIRG
Ga0210403_103651952	3300020580	Soil	VDLDAVEALGVCPLMGDYLDAGLVARHATDRIAHDLMALMAQSPERQPLRS
Ga0210385_111383211	3300021402	Soil	GVCPVLGDYLDEGEVARHATDRVAHDLMALMTQAPDRQTLRS
Ga0210386_105603492	3300021406	Soil	AIEAMGVCPVLGDYLDEGAVARHATNRVAHDLMALMAQAPDRQTLRS
Ga0210390_101642191	3300021474	Soil	PVLGDYLDEGTVARHATDHVAHDLMALMAQAPDRQTLRS
Ga0210398_113928831	3300021477	Soil	LGVCPVLGDYLDEGTVARHATDHVAHDLMALMAQAPDRQTLRS
Ga0208036_10538452	3300025419	Peatland	VCPVLGDYLEEGAVARHATDHVAHDLMALMAQTPDRQTIRS
Ga0208686_10797772	3300025500	Peatland	GEYLEEGAVARHATDRVAHDLMALMAQAPDRQPIRS
Ga0208188_10138171	3300025507	Peatland	LLGDYLEEGEVARHATDRVAHDLMALMAQAPDRQTIRS
Ga0208820_11557212	3300025576	Peatland	VCPVLGDYLEEGEVARHATDHVAHDLMALMAQAPVRQAIRS
Ga0207646_101202232	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VVDLEAIEALGVCPLQGDYLEEGETARHATDRVAHDLMALMAQAPDRQTIRS
Ga0207646_103247021	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	DAIEALGVCPVLGDYLEEGETARHATDRVAHDLMALMAQAPDRQTIRS
Ga0257154_10631172	3300026467	Soil	LGICPVLGDYLDEHMVARHATDRVASDLMTLMAQTPDHHAAPQ
Ga0208199_10559011	3300027497	Peatlands Soil	IEALGVCPLLGDYLEEGEVARHATDRVAHDLMALMAQAPDRQTIRG
Ga0208324_11080861	3300027604	Peatlands Soil	EALDVCPLLGDYLEEGEVARHATDRVAHDLMALMAQAPDRQTIRG
Ga0208565_10174465	3300027662	Peatlands Soil	CPLLGDYLEEGEVARHATDRVAHDLMALMAQAPDRQTIRG
Ga0209908_101784191	3300027745	Thawing Permafrost	VDLEAIETLGVCPVLGEYLVEGAVARHATDRLAHDLMALMARTPDRQTIRS
Ga0209772_100697651	3300027768	Bog Forest Soil	VCPVLGDYLEEGAAARHATDRVAHDLMALMAQTPDRSAVRN
Ga0209274_101296611	3300027853	Soil	DLEAIEALNVCPLLGDYLDEGEVARHATDRVAHDLMALMAQAPDRQAIRSRL
Ga0209526_103619412	3300028047	Forest Soil	VCPLMGDYLDAGLVARHATDKIAHDLMALMAQSPERQPLRS
Ga0255358_10342381	3300028069	Soil	LGDYLEEGAVARHATGRVAQDLMALMAQAQGRQPIRS
Ga0302147_100284951	3300028566	Bog	EALGVCPLLGDYLDEGEVARHATDQVAHDLMALMAQAPDRQTVRS
Ga0302301_11504462	3300028731	Palsa	IEALGVCPVLGDYLDEGDVARHATDRVAHDLMALMAQTPDRQTIRS
Ga0302225_101450931	3300028780	Palsa	LEAIEEIGVCPLLGDYLEEGTVARHATERVAQDLMALMAQAPARQTLR
Ga0302142_10036594	3300029920	Bog	GVCPVLGDYLVEGATARHATDRVAHDLMALMAQAPERHTIRS
Ga0311363_103783233	3300029922	Fen	DLDAIEGLGVCPLLGNYLEEGTVARHATDQVARDLMTLMAQAPKRQMVRG
Ga0302306_104205811	3300030043	Palsa	GVCPLLGDYLEEGTVARHATERVAQDLMALMAQAPARQTLR
Ga0311372_107522401	3300030520	Palsa	DLTAIRALGVRPLLGDYLEEGAVVRHATDRVAHDLMALMARAPDRQPIRS
Ga0311355_106782402	3300030580	Palsa	LGDYLEEGTVARHATERVAQDLMALMAQAPARQTLR
Ga0311355_118639692	3300030580	Palsa	VMGDYLEEGEVARHATDRLAHDLMALMAQAPDRQAIRS
Ga0311356_104005342	3300030617	Palsa	VVDLTAIRALGVRPLLGDYLEEGAVVRHATDRVAHDLMALMARAPDRQPIRS
Ga0302310_107325412	3300030737	Palsa	DLEAIEALGVCPVLGDYLDEGDVARHATDRVAHDLMALMAQTPDRQTIRS
Ga0311335_114246402	3300030838	Fen	IEALGVCAVLGDYLDEGTVARHATERVAHDLMGLMAQAPDRHATPR
Ga0302307_101528671	3300031233	Palsa	LGDYLEEGAVVRHATDRVAHDLMALMARAPDRQPIRS
Ga0302325_123158222	3300031234	Palsa	LGDYLDEGDVARHATDRVAHDLMALMAQTPDRQTIRS
Ga0265342_106130421	3300031712	Rhizosphere	EVDLDAIEAIGVCPILGDYLGEGAVARHATDQVAHDLMALMAQSPDRQATSR
Ga0307474_103861031	3300031718	Hardwood Forest Soil	DYLEEGAVVRHATDRVAHDLMALMARAPDRQPIESGPIQS
Ga0307473_109338762	3300031820	Hardwood Forest Soil	ILGDYLDEGDVARHATDRVAQDLMALMAQTPARQTPTR
Ga0307473_111860071	3300031820	Hardwood Forest Soil	VADLDAIEALGVCPLLGDYLDEGEVARHATERVAHDLIALMAQTPDRHSIPR
Ga0302322_1019323212	3300031902	Fen	GDYLDEGEVARHATDRVARDLMTLMAQAPDRQSIPR
Ga0307479_111593661	3300031962	Hardwood Forest Soil	DYLEEGEVARHATGRVAHDLMALMAQATDRQTIRS
Ga0307471_1008258171	3300032180	Hardwood Forest Soil	DLDAIEKLEVCPILGDYLDEGDVARHATDRVAQDLMALMAQTPARQTPTR
Ga0335078_105554292	3300032805	Soil	CPVLGDYLEEGAAARHATERVARDLLQLVSDAAERRR
Ga0335080_104972321	3300032828	Soil	LGDYLDEGAMARHATDAVARDLMGLMEQMPERQSVR
Ga0335070_100714535	3300032829	Soil	EMGVCAVLGDYLEEGTMARHATDAVARDLMSLMEQKPERRTAVR
Ga0335069_102387101	3300032893	Soil	AVLGDYLEEGTMARHATDAVARDLMSLMEQKPERRTAVR
Ga0314864_0010499_9_125	3300033805	Peatland	VLGDYLEEGAVARHATEQVARDLMALMAQAPERQPTAR
Ga0334854_001710_5178_5291	3300033829	Soil	MGDYLEEGEVARHATDRLAHDLMALMAQTPDRKTIRS
Ga0371488_0424048_475_600	3300033983	Peat Soil	VCPVLGDYLEEGTVARHATDQVAHDLMALMAQAPTRQTIRS
Ga0326724_0425174_3_113	3300034091	Peat Soil	VCPVLGDYLEEGAVARHATDRVAHDLMALMSQAPDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087600

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences