Metagenome Family F087581

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087581
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	76 residues
Representative Sequence	MRAVTLAAALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGAMVRWRCTYGVPQGEVTVEETAAYCAPYRPLP
Number of Associated Samples	70
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	70.00 %
% of genes near scaffold ends (potentially truncated)	36.36 %
% of genes from short scaffolds (< 2000 bps)	87.27 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.364 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.727 % of family members)
Environment Ontology (ENVO)	Unclassified (52.727 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.182 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 10.58% β-sheet: 35.58% Coil/Unstructured: 53.85%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF04542	Sigma70_r2	5.45
PF03583	LIP	2.73
PF08281	Sigma70_r4_2	2.73
PF00106	adh_short	1.82
PF00486	Trans_reg_C	1.82
PF00041	fn3	1.82
PF08241	Methyltransf_11	1.82
PF11684	DUF3280	0.91
PF04519	Bactofilin	0.91
PF11769	DUF3313	0.91
PF03352	Adenine_glyco	0.91
PF06580	His_kinase	0.91
PF01833	TIG	0.91
PF07969	Amidohydro_3	0.91
PF16344	DUF4974	0.91
PF01694	Rhomboid	0.91
PF00230	MIP	0.91
PF09423	PhoD	0.91
PF13356	Arm-DNA-bind_3	0.91
PF12847	Methyltransf_18	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	5.45
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	5.45
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	5.45
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	5.45
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.91
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.91
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	0.91
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.91
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
All Organisms	root	All Organisms	33.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
cellular organisms	root	All Organisms → cellular organisms	33.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.27 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.55 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.82 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.73 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.82 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.82 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.91 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.91 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	5.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.82 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.82 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.91 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.91 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.91 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.91 %
Legionellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales	0.91 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.82 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.91 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.91 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.91 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.91 %
Legionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	0.91 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.82 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.82 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.91 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.91 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	0.91 %
Legionella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	0.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.91 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.36 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.82 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.82 %
Steroidobacter agaridevorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agaridevorans	0.91 %
Legionella geestiana	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella geestiana	0.91 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.91 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	0.91 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.91 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10088058	All Organisms → cellular organisms → Bacteria → Proteobacteria	1470	Open in IMG/M
3300005332\|Ga0066388_100392978	Not Available	2033	Open in IMG/M
3300005332\|Ga0066388_102815637	Not Available	889	Open in IMG/M
3300005332\|Ga0066388_103248125	Not Available	831	Open in IMG/M
3300005355\|Ga0070671_101152431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella geestiana	682	Open in IMG/M
3300005435\|Ga0070714_100012876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6687	Open in IMG/M
3300005764\|Ga0066903_100105597	All Organisms → cellular organisms → Bacteria → Proteobacteria	3830	Open in IMG/M
3300005764\|Ga0066903_100459846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2132	Open in IMG/M
3300005764\|Ga0066903_100460685	All Organisms → cellular organisms → Bacteria	2131	Open in IMG/M
3300005764\|Ga0066903_100863718	All Organisms → cellular organisms → Bacteria	1630	Open in IMG/M
3300005764\|Ga0066903_101826762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter agaridevorans	1162	Open in IMG/M
3300005764\|Ga0066903_104024117	Not Available	788	Open in IMG/M
3300005764\|Ga0066903_104065383	Not Available	784	Open in IMG/M
3300005764\|Ga0066903_107920814	Not Available	545	Open in IMG/M
3300006175\|Ga0070712_100132443	All Organisms → cellular organisms → Bacteria → Acidobacteria	1891	Open in IMG/M
3300006755\|Ga0079222_10960322	Not Available	728	Open in IMG/M
3300006903\|Ga0075426_10470021	All Organisms → cellular organisms → Bacteria	932	Open in IMG/M
3300009162\|Ga0075423_12216277	Not Available	597	Open in IMG/M
3300009792\|Ga0126374_10017674	All Organisms → cellular organisms → Bacteria → Proteobacteria	3042	Open in IMG/M
3300009792\|Ga0126374_10630222	Not Available	796	Open in IMG/M
3300009792\|Ga0126374_10947378	Not Available	671	Open in IMG/M
3300010048\|Ga0126373_10235265	Not Available	1794	Open in IMG/M
3300010048\|Ga0126373_10589645	Not Available	1163	Open in IMG/M
3300010048\|Ga0126373_11808030	Not Available	674	Open in IMG/M
3300010358\|Ga0126370_10495707	Not Available	1030	Open in IMG/M
3300010358\|Ga0126370_10664606	Not Available	910	Open in IMG/M
3300010358\|Ga0126370_11468262	Not Available	647	Open in IMG/M
3300010360\|Ga0126372_10195405	Not Available	1678	Open in IMG/M
3300010361\|Ga0126378_10689006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1134	Open in IMG/M
3300010361\|Ga0126378_10776141	Not Available	1068	Open in IMG/M
3300010366\|Ga0126379_10578349	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1206	Open in IMG/M
3300010366\|Ga0126379_11722375	Not Available	731	Open in IMG/M
3300010366\|Ga0126379_12966169	Not Available	568	Open in IMG/M
3300010366\|Ga0126379_13554077	Not Available	522	Open in IMG/M
3300010373\|Ga0134128_12027723	Not Available	634	Open in IMG/M
3300010376\|Ga0126381_100046739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5276	Open in IMG/M
3300010376\|Ga0126381_100360151	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2014	Open in IMG/M
3300010376\|Ga0126381_100743400	Not Available	1405	Open in IMG/M
3300012971\|Ga0126369_11547097	Not Available	753	Open in IMG/M
3300012971\|Ga0126369_11858809	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300012971\|Ga0126369_12066229	Not Available	658	Open in IMG/M
3300012971\|Ga0126369_13610736	Not Available	507	Open in IMG/M
3300015371\|Ga0132258_10113986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6408	Open in IMG/M
3300015373\|Ga0132257_104112279	Not Available	529	Open in IMG/M
3300016270\|Ga0182036_11466308	Not Available	572	Open in IMG/M
3300016270\|Ga0182036_11739730	Not Available	527	Open in IMG/M
3300016294\|Ga0182041_10550008	All Organisms → cellular organisms → Bacteria → Proteobacteria	1008	Open in IMG/M
3300016294\|Ga0182041_11191620	Not Available	694	Open in IMG/M
3300016319\|Ga0182033_10262311	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300016341\|Ga0182035_11140330	Not Available	695	Open in IMG/M
3300016341\|Ga0182035_11265000	Not Available	660	Open in IMG/M
3300016371\|Ga0182034_10228471	All Organisms → cellular organisms → Bacteria → Acidobacteria	1455	Open in IMG/M
3300016371\|Ga0182034_11518077	Not Available	587	Open in IMG/M
3300016387\|Ga0182040_10013308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4322	Open in IMG/M
3300016404\|Ga0182037_10441218	Not Available	1081	Open in IMG/M
3300016422\|Ga0182039_10160101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1755	Open in IMG/M
3300017927\|Ga0187824_10168151	Not Available	734	Open in IMG/M
3300017947\|Ga0187785_10027074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2061	Open in IMG/M
3300017959\|Ga0187779_10490406	Not Available	812	Open in IMG/M
3300021560\|Ga0126371_10059128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3691	Open in IMG/M
3300021560\|Ga0126371_10728976	Not Available	1139	Open in IMG/M
3300025928\|Ga0207700_10703461	Not Available	902	Open in IMG/M
3300027874\|Ga0209465_10221541	Not Available	945	Open in IMG/M
3300031545\|Ga0318541_10843671	Not Available	511	Open in IMG/M
3300031546\|Ga0318538_10477044	Not Available	676	Open in IMG/M
3300031546\|Ga0318538_10731870	Not Available	537	Open in IMG/M
3300031549\|Ga0318571_10162092	Not Available	779	Open in IMG/M
3300031561\|Ga0318528_10095103	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300031561\|Ga0318528_10458099	Not Available	685	Open in IMG/M
3300031561\|Ga0318528_10520528	Not Available	639	Open in IMG/M
3300031572\|Ga0318515_10398031	Not Available	737	Open in IMG/M
3300031573\|Ga0310915_10303257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	1129	Open in IMG/M
3300031573\|Ga0310915_10414322	All Organisms → cellular organisms → Bacteria → Proteobacteria	957	Open in IMG/M
3300031668\|Ga0318542_10319659	Not Available	796	Open in IMG/M
3300031668\|Ga0318542_10468484	Not Available	654	Open in IMG/M
3300031680\|Ga0318574_10263033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300031680\|Ga0318574_10412806	Not Available	789	Open in IMG/M
3300031682\|Ga0318560_10699056	Not Available	548	Open in IMG/M
3300031719\|Ga0306917_10279325	Not Available	1286	Open in IMG/M
3300031719\|Ga0306917_10480056	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300031719\|Ga0306917_11518468	Not Available	515	Open in IMG/M
3300031724\|Ga0318500_10119461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1217	Open in IMG/M
3300031736\|Ga0318501_10428582	Not Available	717	Open in IMG/M
3300031768\|Ga0318509_10598834	Not Available	614	Open in IMG/M
3300031781\|Ga0318547_10289544	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300031782\|Ga0318552_10538374	Not Available	596	Open in IMG/M
3300031793\|Ga0318548_10444558	Not Available	635	Open in IMG/M
3300031797\|Ga0318550_10457209	Not Available	617	Open in IMG/M
3300031846\|Ga0318512_10371496	Not Available	717	Open in IMG/M
3300031890\|Ga0306925_11017877	Not Available	843	Open in IMG/M
3300031910\|Ga0306923_10188908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2354	Open in IMG/M
3300031910\|Ga0306923_11189696	Not Available	815	Open in IMG/M
3300031912\|Ga0306921_12622679	Not Available	520	Open in IMG/M
3300031941\|Ga0310912_10204625	All Organisms → cellular organisms → Bacteria	1510	Open in IMG/M
3300031941\|Ga0310912_10343155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1159	Open in IMG/M
3300031945\|Ga0310913_10027515	All Organisms → cellular organisms → Bacteria	3596	Open in IMG/M
3300031946\|Ga0310910_10755625	Not Available	767	Open in IMG/M
3300031954\|Ga0306926_10395092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1707	Open in IMG/M
3300031959\|Ga0318530_10502493	Not Available	504	Open in IMG/M
3300032008\|Ga0318562_10608370	Not Available	631	Open in IMG/M
3300032035\|Ga0310911_10298892	Not Available	926	Open in IMG/M
3300032039\|Ga0318559_10364596	Not Available	673	Open in IMG/M
3300032041\|Ga0318549_10433608	Not Available	592	Open in IMG/M
3300032043\|Ga0318556_10592455	Not Available	578	Open in IMG/M
3300032063\|Ga0318504_10231269	Not Available	868	Open in IMG/M
3300032066\|Ga0318514_10415130	Not Available	715	Open in IMG/M
3300032094\|Ga0318540_10631165	Not Available	516	Open in IMG/M
3300032261\|Ga0306920_100630397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1585	Open in IMG/M
3300032261\|Ga0306920_102106578	Not Available	787	Open in IMG/M
3300032783\|Ga0335079_11048680	Not Available	829	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.45%
Host-Associated	Host-Associated	4.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.55%
Plants	Host-Associated → Plants	4.55%
Aquatic	Environmental → Aquatic	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.82%
Freshwater	Environmental → Aquatic → Freshwater	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.27%
Loam	Environmental → Terrestrial → Soil → Loam	14.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_100880583	3300004633	Tropical Forest Soil	MRAVTLAAVLLAGCASQPPALYHTLTSERPMGELHGQTAIGIDGSMVRWRCTYGAPQGEVTVEETAPYCEPYRLLP*
Ga0066388_1003929782	3300005332	Tropical Forest Soil	MRAVTLAAVLVAGCASQSPALYHTLTSERPMGELHGQTAIGIDGSMVRWRCTYGAPQGEVTVEETAAYCEPYRLLP*
Ga0066388_1028156372	3300005332	Tropical Forest Soil	MRAFTLAAAVLVGCTSQPPALYHSLTSEQTVGELRGQTAIGTDGPMVRWRCTYSAHQGEVTVEETAAYCAPYRLLRE*
Ga0066388_1032481252	3300005332	Tropical Forest Soil	MKAVTLAAALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGPMVRWRCTYGAQQGEVTVEESAAYCAPYRPLP*
Ga0070671_1011524311	3300005355	Switchgrass Rhizosphere	LVGCASQPPALYRTLSSDQTVGELRDQTAIGIDGPTVRWRCTYAAVEGNVTVEETGAYCTPHRVLP*
Ga0070714_1000128765	3300005435	Agricultural Soil	MRGITLAAALLVGCTSQPPASYRTLTSEQKVGELRAQTAIGTEGPMVRWRCTYGASWGEVTVEETAAYCAPYRVLQ*
Ga0066903_1001055974	3300005764	Tropical Forest Soil	MRTVMLAAALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGPMVRWRCTYGAQQGEVTVEESAAYCAPYRPLP*
Ga0066903_1004598462	3300005764	Tropical Forest Soil	MRALTLAAVLLAGCASQPPALYHTLTSERPMGELHGQTAIGIDGSMVRWRCTYGAPQGEVTVEETATYCEPYRLLP*
Ga0066903_1004606852	3300005764	Tropical Forest Soil	MRTVTLAAALVAGCASQPPALYQTMTSEQKVGELRGQMAIGTEGPMVRWRCTYGASWGEVTVEETAAYCAPYRVLP*
Ga0066903_1008637182	3300005764	Tropical Forest Soil	MRAVTLAAVLLAGCASQPPALYHTLTSERPMGELHGQTAIGIDGSTVRWRCTYGAPQGEVTVEETAPYCEPYRLLP*
Ga0066903_1018267622	3300005764	Tropical Forest Soil	MRAVTLAVTLLAGCASQPPALYKTLTSEQTVGELRGQTAIGIDGSVVRWRCTYGARQGEVTVEETAAYCPPHRVLP*
Ga0066903_1040241172	3300005764	Tropical Forest Soil	VRAITLATALLMGCVSQPPALYRTLSSDQAVGELRDQTAIGIDGPTVRWRCAYALPRGTVTVEETAAYCAPHRVLP*
Ga0066903_1040653832	3300005764	Tropical Forest Soil	MRAVTLAAALLVGCASQPPALFHTLTSDQSVGELRGQTAIGIDGSMVRWRCTYDALQGQVTVEETAAYCAPHRVLP*
Ga0066903_1079208142	3300005764	Tropical Forest Soil	MRAITLAAVLLAGCASQPPALYHTLTSEQPMGELHGQTAIGIDGSMVRWRCTYGAPQGEVTVEETATYCEPYRLLP*
Ga0070712_1001324431	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TLAAALLVGCTSQPPASYRTLTSEQKVGELRAQTAIGTEGPMVRWRCTYGASWGEVTVEETAAYCAPYRVLQ*
Ga0079222_109603221	3300006755	Agricultural Soil	VKAVTLVMVLLAGCASQPPALYRTLSSDQAVGELRDQTAIGIEGSTVRWRCTYAALEVHVTVEETGAYCTPHRVLP*
Ga0075426_104700211	3300006903	Populus Rhizosphere	EMRVVTLAAALLGGCASQQPALYHTLTSEQTVGELRGQTATGIEGSMVRWRCTYGAPKGEVTVEVTAAYCAPYRVLP*
Ga0075423_122162771	3300009162	Populus Rhizosphere	MRVVTLAAALLGGCASQQPALYHTLTSEQTVGELRGQTATGIEGSMVRWRCTYGAPKGEVTVEVTAAYCAPYRVLP*
Ga0126374_100176742	3300009792	Tropical Forest Soil	MKAVTLAAALLAGCASQPPALYRTLTSEQTVGELRRQTAIGIDGPMVRWRCTYGAQQGEVTVEETAAYCAPYRALQ*
Ga0126374_106302221	3300009792	Tropical Forest Soil	MRAITLAAVLLAGCASQPPALYHTLTSERPMGELHGQTAIGIDGSMVRWRCTYGAPQGEVTVEETATYCEPYRLLP*
Ga0126374_109473781	3300009792	Tropical Forest Soil	MRALTLAAAVLVGCTSQPPALYHSLTSEQTVGELRGQTAIGTDGPMVRWRCTYSAHQGEVTVEETAAYCAPYRPLP*
Ga0126373_102352654	3300010048	Tropical Forest Soil	MRAVALAVALLAGCASEPPGLYKTLTSEQTVGELRGQTAIGIDGPMVRWRCTYGALQQEVTVEETGASCAPYRVIP*
Ga0126373_105896452	3300010048	Tropical Forest Soil	MRAVTLAALLAGCASQPPALYQTLTSNQTVGELRGQAAMGIDGPMVRWRCTYSSPQGEVTVEETATYCAPTRVLP*
Ga0126373_118080301	3300010048	Tropical Forest Soil	MRAVTLAAALLAGCASHPPATYHTLTSEQTMGELRGQKAIGINGSLVRWRCTYDAPQGKVTVEETAAYCAPHQVLP*
Ga0126370_104957071	3300010358	Tropical Forest Soil	MRAVTLAAVLLAGCASQPPALYHTLTSERPMGELHGQTAIGIDGSMVRWRCTYDAPQGEVTVEETAPYCEPYRLLP*
Ga0126370_106646061	3300010358	Tropical Forest Soil	MRAVALLGALLAGCASQPPALYQTLTSEQTVGELRGQTAIGTDGPMVRWRCTYRAPQGEVTVEETAAYCAPYRVLP*
Ga0126370_114682622	3300010358	Tropical Forest Soil	MRAVALAVALLAGCASQPPGLYKTLTSEQTMGELRGQTAIGIDGPMVRWRCTYSAQQREATVEETATYCAPSRMLP*
Ga0126372_101954052	3300010360	Tropical Forest Soil	MRTLTLAAVLLAGCASQPPALYHTLTSERPMGELHGQTAIGIDGSMVRWRCTYGAPQGEVTVEETATYCEPYRLLP*
Ga0126378_106890062	3300010361	Tropical Forest Soil	VTLAAALLSGCASQSTALYHTLTSEQTLGELRGQAAIGIDGPMVRWRCTYGAQQGEVTVEETAASCAPYRLLP*
Ga0126378_107761411	3300010361	Tropical Forest Soil	MRALTLAAAVLVGCTSQPPALYHSLTSEQTVGELRGQTAIGTDGPMVRWRCTYSAHQGEVTVEETAAYCAPYRLLRE*
Ga0126379_105783492	3300010366	Tropical Forest Soil	MRAVTLAAALLSGCASQSTALYHTLTSEQTLGELRGQAAIGIDGPMVRWRCTYGAQQGEVTVEETAASCAPYRLLP*
Ga0126379_117223752	3300010366	Tropical Forest Soil	ALAAALLAGCASQPPGLYKTLTSEQTMGELRGQTAIGIDGPMVRWRCTYSAQQREATVEETAAYCAPSRVLP*
Ga0126379_129661691	3300010366	Tropical Forest Soil	VLRGVNTRADRGANMRAVTLAAVLLAGCASQPPALYHTLTSERPMGELHGQTAIGIDGSMVRWRCTYGAPQGEVTVEETAPYCEPYRLLP*
Ga0126379_135540772	3300010366	Tropical Forest Soil	MRAVTLAAALLAGCASHPPASYHTLTSEQAVGELRGQTAIGINGPMVRWRCTYDAPQGKTTVEQTAAYCAPHHALP*
Ga0134128_120277231	3300010373	Terrestrial Soil	MRAVTLVMVLLVGCASQPPALYRTLSSDQTVGELRDQTAIGIDGPTVRWRCTYAAVEGNVTVEETGAYCTPHRVLP*
Ga0126381_1000467393	3300010376	Tropical Forest Soil	MRAVTLAAVLLAGCATQPPASYHTLTSGQTVGELRGQTAIGTDGPMIRWRCTYGAPQGEVTVEETAAYCAPHRVLP*
Ga0126381_1003601512	3300010376	Tropical Forest Soil	MRSVALAAALLAGCASQPPGLYNTLTSEQTLGELHGQTAIGIDGAMVRWSCIYGAQQRVVTVEETAAYCAPRRMIP*
Ga0126381_1007434001	3300010376	Tropical Forest Soil	MRAATLVVSLLAGCASQPPALYHTLTAEQTVGQLRGQTAIGIDGPMVHWRCTYRGPQGEVTVEETAAYCAAYRVLP*
Ga0126369_115470972	3300012971	Tropical Forest Soil	MRTVILAAALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGPMVRWRCTYGAQQGEVTVEESAAYCAPYRPLP*
Ga0126369_118588091	3300012971	Tropical Forest Soil	MRAVALAGALLAGCASQPHASYQTLTSEQTVGELRGQTAIGTDGPVVRWRCTYGAPQGEVTVEETAAYCAPYRVLP*
Ga0126369_120662292	3300012971	Tropical Forest Soil	MRTVILAAALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGPMVRWRCTYGAQQGEVTVEETAAYCAPYRPQ*
Ga0126369_136107361	3300012971	Tropical Forest Soil	MRGITLAAALLVGCTSQPPALYRTLTSEQKVGELRGQMAIGTDGPMVRWRCTYGASWGEVTVEETAAYCAPYRVLP*
Ga0132258_101139864	3300015371	Arabidopsis Rhizosphere	MRAVTLAAVLLAGCASQPPALYQTLTSEQKVGELRGQTAIGTEGPMVHWRCTYGAPQGEVTVEETAAYCAPYRVLP*
Ga0132257_1041122791	3300015373	Arabidopsis Rhizosphere	MRAVTLAAVLLAGCASQPPALYQTLTSEQKVGELRGQTAVGIDGSVVRWRCTYGAQQGDVTVEETGAYCPPY
Ga0182036_114663081	3300016270	Soil	VRAVTLTVALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGPMVRWRCTYGAPQGGVTVEETAAY
Ga0182036_117397301	3300016270	Soil	MRAATLVVSLLAGCASQPPALYQTLTSEQVVGQLRAQTAIGIDGAMVRWQCTYGSPQGEVTVEETAASCASSRILP
Ga0182041_105500081	3300016294	Soil	MRGVTLAAALLAGCASQPPALYQTLTSEQTVGELRGQAAIGIDGLMVRWRCTYGAQQGEVTVEETAAYCAPYRPLP
Ga0182041_111916201	3300016294	Soil	MRAVTLAAALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGAMVRWRCTYGVPQGEVTVEETAA
Ga0182033_102623113	3300016319	Soil	LLAGCASQPPALYHTLTSAQTVGELRGQTAVGIDGPMVRWRCTYGAQQGEMTVEETAAYCAPYRALP
Ga0182035_111403301	3300016341	Soil	MRAVTLAAALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGPMVRWRCTYRAPQGEVTLEETAAYCAPHRVLP
Ga0182035_112650001	3300016341	Soil	GGWEMRAATLVVSLLAGCASQPSALYRTLTSEQVVGQLRAQTAIGIDGAMVRWQCTYGSPQGEVTVEETAASCASSRILP
Ga0182034_102284712	3300016371	Soil	MRAATLTVALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGPMVRWRCTYGVRQGEVTVEETAAYCAHYRVLGSVPGDPGNAQ
Ga0182034_115180771	3300016371	Soil	LTVALLAGCASQPPALYHTLTSAQTVGELRGQTAVGIDGPMVRWRRTYGAQQGEMTVEQTAAYCAPYRALP
Ga0182040_100133083	3300016387	Soil	MRAATLTVALLAGCASQPPALYHTVTSAQTVGELRGQTAVGIDGPMVRWRCTYGAQQGEMTVEQTAAYCAPYRALP
Ga0182037_104412182	3300016404	Soil	MRAVSLAAALLVGCASHPPASYHTVTAEQTTGELRGQKAIGISGATVRWRCTYNAPQGQVTVDETAAYCAPHQVLSRE
Ga0182039_101601011	3300016422	Soil	PLFSGPRGGWEMRAATLVVSLLAGCASQPSALYRTLTSEQVVGQLRAQTAIGIDGAMVRWQCTYGSPQGEVTVEETAASCASSRILP
Ga0187824_101681511	3300017927	Freshwater Sediment	MRAITLAAALLVGCTSQPPASYRTLTSEQKVGELRAQTAIGTEGPMVRWRCTYGASWGEVTVEETAAYCAPYRVLE
Ga0187785_100270744	3300017947	Tropical Peatland	MRAITLAAALLVGCTSQPPALYRTLTSEQKVGELRAQTAIGTEGPMVRWRCTYGASWGEVTVEETAAYCAPYRVLP
Ga0187779_104904062	3300017959	Tropical Peatland	MRGITLAAALLAGCTSQLPASYRTLTSQQKVGELRAQTAIGTEGSMVRWRCTYGAPGGEVTVQETAAYCAPYRVLQ
Ga0126371_100591285	3300021560	Tropical Forest Soil	MRAVTLAAVLLAGCASQPPALYHTLTSERPMGELHGQTAIGIDGSMVRWRCTYGAPQGEVTVEETAPYCEPYRLLP
Ga0126371_107289761	3300021560	Tropical Forest Soil	MRAVALAAALLAGCASQPPGLYKTLTSEQTMGELRGQTAIGIDGPMVRWRCTYSAQQREATVEETAAYCAPSRVLP
Ga0207700_107034612	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AGMRGITLAAALLVGCTSQPPASYRTLTSEQKVGELRAQTAIGTEGPMVRWRCTYGASWGEVTVEETAAYCAPYRVLQ
Ga0209465_102215411	3300027874	Tropical Forest Soil	MRALTLAAVLLAGCASQPPALYHTLTSERPMGELHGQTAIGIDGSMVRWRCTYGAPQGEVTVEETAPYCEPYRLLP
Ga0318541_108436711	3300031545	Soil	HGGREMRAATLAVALLAGCASQPPALYHTLTSAQTVGELRGQTAVGIDGPMVRWRCTYGAQQGEMTVEQTAAYCAPYRALP
Ga0318538_104770441	3300031546	Soil	VTRGLSTSGRSRDDRLIALRGVNVRGHRGSQMRAATLTVALLAGCASQPPALYHTLTSAQTVGELRGQTAVGIDGPMVRWRCTYGAQQGEMTVEETAAYCAPYRALP
Ga0318538_107318701	3300031546	Soil	MRAVTLAAALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGAMVRWRCTYGVPQGEVTVEETAAYCAHYRVLP
Ga0318571_101620922	3300031549	Soil	IRADQGAEMRTAVTLAAGLLVGCASQPPALYHMLTSEETVGELRGQTAIGIDGSAVRWRCTYGAREEQVTVEETAASCPPHRVFR
Ga0318528_100951033	3300031561	Soil	MRAVSLAAALLVGCASHPPASYHTLTSEQTTGELRGQKAIGISGATVRWRCTYNAPQGQVTVDETAAYCAPHQVLSRE
Ga0318528_104580992	3300031561	Soil	MRALALVAALLAGCASQPPALYQTLTSEQSVGELRGQTAIGIDGPLVRWHCTYGALHGEVTVEETAAYCAPFRVLP
Ga0318528_105205281	3300031561	Soil	LAGCASQPPALYHTLTSAQTVGELRGQTAVGIDGPMVRWRCTYGAQQGEMTVEETAAYCAPYRPLP
Ga0318515_103980311	3300031572	Soil	MRSVTLAAALLAGCASQPPALYHTLTSGQTVGELRGQAAIGIDGLMVRWRCTYGAQQGEVTVEETAAYCAPYRPLP
Ga0310915_103032573	3300031573	Soil	LAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGAMVRWRCTYGVPQGEVTVEETAAYCAHYRVLP
Ga0310915_104143221	3300031573	Soil	VTLAAALLAGCASQPPALYHTLTSGQTVGELRGQAAIGIDGLMVRWRCTYGAQQGEVTVEETAAYCAPYRPLP
Ga0318542_103196592	3300031668	Soil	VTLAAALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGAMVRWRCTYGVPQGEVTVEETAAYCAHYRVLP
Ga0318542_104684841	3300031668	Soil	MRAATLTVALLAGCASQPPALYHTLTSAQTVGELRGQTAVGIDGPMVRWRCTYGAQQGEMTVEETAAYCAPY
Ga0318574_102630332	3300031680	Soil	VRAVTLTVALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGPMVRWRCTYGVRQGEVTVEETAAYCAHYRVLGSVPGDPGNAQ
Ga0318574_104128061	3300031680	Soil	MRAATLAVALLAGCASQPPALYHTLTSAQTVGELRGQTAVGIDGPMVRWRCTYGAQQGEMTVEETAAYCAPYRALP
Ga0318560_106990561	3300031682	Soil	MRAATLVVSLLAGCASQPSALYRTLTSEQVVGQLRAQTAIGIDGAMVRWQCTYGSPQGEVTVEETAASCASSRILP
Ga0306917_102793252	3300031719	Soil	MRAATLTVALLAGCASQPPALYHTLTSAQTVGELRGQTAVGIDGPMVRWRCTYGAQQGEMTVEETAAYCAPYRALP
Ga0306917_104800561	3300031719	Soil	MRAVTLAAVLLVGCASQPPALYRTLTSEQTVGKLIGQTAVGIDGPMVRWRCTYGAPQGKVTVEETAAYCAPHRVLP
Ga0306917_115184681	3300031719	Soil	ALRGVNVRGHGGREMRAATLAVALLAGCASQPPALYHTLTSAQTVGELRGQTAVGIDGPMVRWRCTYGAQQGEMTVEQTAAYCAPYRALP
Ga0318500_101194613	3300031724	Soil	MRAVTLAAALLVGCASQPPALYQTLTSEQTVGELRGQTAIGIDGAMVRWRCTYGVPQGEVTVEETAAYCAHYRVLP
Ga0318501_104285822	3300031736	Soil	AGCASQPPTLYHTLTSEQTVGELRGQTAIGIDGAMVRWRCTYGVPQGEVTVEETAAYCAHYRVLP
Ga0318509_105988341	3300031768	Soil	MRAVSLAAALLVGCASHPPASYHTLTSEQTTGELRGQKAIGINGPTVRWQCTYDAPQGQVTVEQTAAYCAPHQVLSRE
Ga0318547_102895441	3300031781	Soil	MRSVTLAAALLAGCASQPPALYHTLTSGQTVGELRGQAAIGIDGLMVRWRCTYGAQQGEVTVEETAAYC
Ga0318552_105383741	3300031782	Soil	VTLAAVLLVGCASQPPALYRTLTSEQTVGKLIGQTAVGIDGPMVRWRCTYGAPQGKVTVEETAAYCAPHRVLP
Ga0318548_104445581	3300031793	Soil	MRAVTLAAALLAGCASQPPALYHTLTSGQTVGELRGQAAIGIDGLMVRWRCTYGAQQGEVTVEETAAYCAPYRPLP
Ga0318550_104572092	3300031797	Soil	VFSSEQLKAKPLFSGPRGGWEMRAATLVVSLLAGCASQPSALYRTLTSEQVVGQLRAQTAIGIDGAMVRWQCTYGSPQGEVTVEETAASCASSRILP
Ga0318512_103714961	3300031846	Soil	MRAATLTVALLAGCASQPPALYHTLTSAQTVGELRGQTAVGIDGPMVRWRCTYGAQQGEMTVEQTAAYCAPYRALP
Ga0306925_110178772	3300031890	Soil	MRAATLAVALLAGCASQPPALYHTLTSAQTVGELRGQTAVGIDGPMVRWRCTYGAQQGEMTVEQTAAYCAPYRALP
Ga0306923_101889081	3300031910	Soil	AATLVVSLLAGCASQPSALYRTLTSEQVVGQLRAQTAIGIDGAMVRWQCTYGSPQGEVTVEETAASCASSRILP
Ga0306923_111896961	3300031910	Soil	RGALRCKMRAVTLAAALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGAMVRWRCTYGVPQGEVTVEETAAYCAHYRVLP
Ga0306921_126226791	3300031912	Soil	LRCKVRAVTLTVALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGPMVRWRCTYGVRQGEVTVEETAAYCAHYRVLGSV
Ga0310912_102046251	3300031941	Soil	GHGGREMRAATLAVALLAGCASQPPALYHTLTSAQTVGELRGQTAVGIDGPMVRWRCTYGAQQGEMTVEETAAYCAPYRALP
Ga0310912_103431551	3300031941	Soil	MRAVTLAAALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGTMVRWRCTYRAPQGEVTLEETAAYCAPHRVLP
Ga0310913_100275155	3300031945	Soil	MRAVTLAAALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGAMVRWRCTYGVPQGEVTVEETAAYCAPYRPLP
Ga0310910_107556252	3300031946	Soil	AVSLAAALLVGCASHPPASYHTLTSEQTTGELRGQKAIGISGATVRWRCTYNAPQGQVTVDETAAYCAPHQVLSRE
Ga0306926_103950923	3300031954	Soil	LAGCASQPPALYRTLTSEQVVGQLRGQTAIGIDGAMVRWQCTYGSPQGEVTVEETAASCASSRILP
Ga0318530_105024931	3300031959	Soil	MRAATLVVSLLAGCASQPSALYRTLTSEQVVGQLRAQTAIGIDGAMVRWQCTYGSPQGEVTVEE
Ga0318562_106083702	3300032008	Soil	LVGCASHPPASYHTLTSEQTTGELRGQKAIGISGATVRWRCTYNAPQGQVTVDETAAYCAPHQVLSRE
Ga0310911_102988922	3300032035	Soil	MRAVTLAAALLAGCASQPPALYHTLTSAQTVGELRGQTAVGIDGPMVRWRCTYGAQQGEMTVEQTAAYCAPYRALP
Ga0318559_103645961	3300032039	Soil	ATLVVSLLAGCASQPSALYRTLTSEQVVGQLRAQTAIGIDGAMVRWQCTYGSPQGEVTVEETAASCASSRILP
Ga0318549_104336082	3300032041	Soil	GCASQPPALYRTLTSEQTVGELRGQTAIGIDGAMVRWRCTYGVPQGEVTVEETAAYCAHYRVLP
Ga0318556_105924551	3300032043	Soil	CGCAQLFPSSTVFSSEQLKAKPLFSGPRGGWEMRAATLVVSLLAGCASQPSALYRTLTSEQVVGQLRAQTAIGIDGAMVRWQCTYGSPQGEVTVEETAASCASSRILP
Ga0318504_102312692	3300032063	Soil	MRAATLTVALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGAMVRWRCTYGVPQGEVTVEETAAYCAHYRVLP
Ga0318514_104151302	3300032066	Soil	MRAATLAVALLAGCASQPPALYRTLTSEQTVGELRGQTAIGIDGPMVRWRCTYGAPQGGVTVEETAAYCAHYRVLP
Ga0318540_106311651	3300032094	Soil	LLAGCASQPPALYHTLTSGQTVGELRGQAAIGIDGLMVRWRCTYGAQQGEVTVEETAAYCAPYRPLP
Ga0306920_1006303972	3300032261	Soil	MRTATLAAVLLVGCASQPPALYQTLTSEQTVGELRGQTAIGIDGTMVRWRCTYRAPQGEVTLEETAAYCAPHRVLP
Ga0306920_1021065782	3300032261	Soil	MREVTLAAALLVGCASQPPALYQTLTSEQTVGELHGQTAIGIDGPLVRWRCAYGAPQGEVTVEETAASCAPHRRLP
Ga0335079_110486801	3300032783	Soil	MRAITLAAALLVGCTSQPPASYRTLTSEQKVGELRAQTAIGTEGPMVRWRCTYGASWGEVTVEETAAYCAPYRVFQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087581

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences