Metagenome / Metatranscriptome Family F087575

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087575
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	107 residues
Representative Sequence	RVRLTDDDRLVLAARFEAYLTWRHAGEPAPRSARATAERIGWQAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLVSTGELTAADLRRLPASSPPG
Number of Associated Samples	91
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.18 %
% of genes near scaffold ends (potentially truncated)	90.00 %
% of genes from short scaffolds (< 2000 bps)	89.09 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (26.364 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.818 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.22% β-sheet: 0.00% Coil/Unstructured: 50.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01370	Epimerase	17.27
PF14016	DUF4232	7.27
PF00378	ECH_1	6.36
PF02233	PNTB	1.82
PF01699	Na_Ca_ex	1.82
PF02861	Clp_N	1.82
PF00415	RCC1	0.91
PF03350	UPF0114	0.91
PF13540	RCC1_2	0.91
PF01068	DNA_ligase_A_M	0.91
PF09250	Prim-Pol	0.91
PF00069	Pkinase	0.91
PF00999	Na_H_Exchanger	0.91
PF01012	ETF	0.91
PF02274	ADI	0.91
PF00144	Beta-lactamase	0.91
PF01554	MatE	0.91
PF13581	HATPase_c_2	0.91
PF00589	Phage_integrase	0.91
PF02771	Acyl-CoA_dh_N	0.91
PF01243	Putative_PNPOx	0.91
PF00440	TetR_N	0.91
PF12680	SnoaL_2	0.91
PF13276	HTH_21	0.91
PF00581	Rhodanese	0.91
PF02909	TetR_C_1	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.64
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	1.82
COG5184	Alpha-tubulin suppressor ATS1 and related RCC1 domain-containing proteins	Cell cycle control, cell division, chromosome partitioning [D]	1.82
COG1282	NAD/NADP transhydrogenase beta subunit	Energy production and conversion [C]	1.82
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	1.82
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	1.82
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	0.91
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.91
COG4874	Uncharacterized conserved protein	Function unknown [S]	0.91
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.91
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.91
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.91
COG2862	Uncharacterized membrane protein YqhA	Function unknown [S]	0.91
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.91
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	0.91
COG2086	Electron transfer flavoprotein, alpha and beta subunits	Energy production and conversion [C]	0.91
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.91
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	0.91
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.91
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.91
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.91
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.91
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.91

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.09 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	96.36 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	96.36 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	83.64 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.82 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	60.91 %
Actinopolysporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales	8.18 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1.82 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.91 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	60.91 %
Actinopolysporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae	8.18 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1.82 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.91 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	60.91 %
Actinopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora	8.18 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	1.82 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.91 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Unclassified	root	N/A	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	60.91 %
Actinopolyspora mzabensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora mzabensis	8.18 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1.82 %
Microbacterium resistens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium resistens	0.91 %
Frankia coriariae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia coriariae	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Unclassified	root	N/A	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001408\|JGI20206J14855_1013257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1422	Open in IMG/M
3300004152\|Ga0062386_101541019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	554	Open in IMG/M
3300005332\|Ga0066388_100448632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1932	Open in IMG/M
3300005332\|Ga0066388_102755439	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300005341\|Ga0070691_11044625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300005451\|Ga0066681_10559618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	706	Open in IMG/M
3300005468\|Ga0070707_100131915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2430	Open in IMG/M
3300005560\|Ga0066670_10294421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	987	Open in IMG/M
3300005764\|Ga0066903_102576268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	985	Open in IMG/M
3300005995\|Ga0066790_10436492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300006028\|Ga0070717_10464640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1141	Open in IMG/M
3300006059\|Ga0075017_100667888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	798	Open in IMG/M
3300006175\|Ga0070712_100335058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1234	Open in IMG/M
3300006854\|Ga0075425_101924632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300006893\|Ga0073928_10238701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1397	Open in IMG/M
3300009088\|Ga0099830_10280495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1326	Open in IMG/M
3300009764\|Ga0116134_1152427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	815	Open in IMG/M
3300009792\|Ga0126374_10154630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1395	Open in IMG/M
3300009792\|Ga0126374_10570031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300010043\|Ga0126380_12273758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300010046\|Ga0126384_10093935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2194	Open in IMG/M
3300010047\|Ga0126382_10940574	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300010048\|Ga0126373_11662910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300010359\|Ga0126376_12832812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300010360\|Ga0126372_10678543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1002	Open in IMG/M
3300010360\|Ga0126372_12678082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300010361\|Ga0126378_11054686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	915	Open in IMG/M
3300010361\|Ga0126378_11165858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	869	Open in IMG/M
3300010361\|Ga0126378_13092992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300010366\|Ga0126379_10424247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora mzabensis	1384	Open in IMG/M
3300010366\|Ga0126379_10495784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1292	Open in IMG/M
3300010376\|Ga0126381_103524442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300010379\|Ga0136449_103163846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300011270\|Ga0137391_10817870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300011270\|Ga0137391_10849180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300011270\|Ga0137391_11570004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300012201\|Ga0137365_10058642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2906	Open in IMG/M
3300012201\|Ga0137365_10093380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2266	Open in IMG/M
3300012201\|Ga0137365_10804245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300012202\|Ga0137363_11798412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300012203\|Ga0137399_10736649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	830	Open in IMG/M
3300012209\|Ga0137379_10073390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3290	Open in IMG/M
3300012209\|Ga0137379_10228838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1773	Open in IMG/M
3300012210\|Ga0137378_11157621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300012355\|Ga0137369_10248795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1345	Open in IMG/M
3300012358\|Ga0137368_10155322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1685	Open in IMG/M
3300012359\|Ga0137385_10090378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2716	Open in IMG/M
3300012363\|Ga0137390_11642042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300012685\|Ga0137397_10756452	Not Available	721	Open in IMG/M
3300012929\|Ga0137404_11269842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300012929\|Ga0137404_11297951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300012930\|Ga0137407_10025298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4539	Open in IMG/M
3300012971\|Ga0126369_11231370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300012971\|Ga0126369_12691426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300014829\|Ga0120104_1092980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300015090\|Ga0167634_1025139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	851	Open in IMG/M
3300016341\|Ga0182035_10683095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	893	Open in IMG/M
3300016357\|Ga0182032_10227672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora mzabensis	1436	Open in IMG/M
3300017926\|Ga0187807_1126104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	812	Open in IMG/M
3300017928\|Ga0187806_1381849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300017944\|Ga0187786_10412201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300017959\|Ga0187779_10540547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora mzabensis	775	Open in IMG/M
3300017961\|Ga0187778_10638982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora mzabensis	716	Open in IMG/M
3300017966\|Ga0187776_11610078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300018009\|Ga0187884_10227483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300020082\|Ga0206353_10923972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300020583\|Ga0210401_10495019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1085	Open in IMG/M
3300021180\|Ga0210396_10132602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2245	Open in IMG/M
3300021407\|Ga0210383_10790652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	812	Open in IMG/M
3300021420\|Ga0210394_11238796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300021477\|Ga0210398_10136743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1992	Open in IMG/M
3300021477\|Ga0210398_11445032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia coriariae	536	Open in IMG/M
3300021560\|Ga0126371_10815428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1079	Open in IMG/M
3300021560\|Ga0126371_13896089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300021861\|Ga0213853_10338846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1459	Open in IMG/M
3300025627\|Ga0208220_1032267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1616	Open in IMG/M
3300025627\|Ga0208220_1160096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300025922\|Ga0207646_11524242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300026277\|Ga0209350_1143065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	538	Open in IMG/M
3300026294\|Ga0209839_10009878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4040	Open in IMG/M
3300026294\|Ga0209839_10286696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300026310\|Ga0209239_1204244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300026538\|Ga0209056_10314770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1065	Open in IMG/M
3300027787\|Ga0209074_10097025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	990	Open in IMG/M
3300027903\|Ga0209488_10378426	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300027903\|Ga0209488_11193747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300028047\|Ga0209526_10988205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300028811\|Ga0307292_10076593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora mzabensis	1289	Open in IMG/M
3300029987\|Ga0311334_11355611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium resistens	599	Open in IMG/M
3300030002\|Ga0311350_10486482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1108	Open in IMG/M
3300031231\|Ga0170824_117359098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	841	Open in IMG/M
3300031640\|Ga0318555_10018183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3262	Open in IMG/M
3300031713\|Ga0318496_10763989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300031751\|Ga0318494_10781102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300031879\|Ga0306919_10197566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora mzabensis	1493	Open in IMG/M
3300031912\|Ga0306921_10412088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1577	Open in IMG/M
3300031954\|Ga0306926_10141253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2980	Open in IMG/M
3300032001\|Ga0306922_11477744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora mzabensis	680	Open in IMG/M
3300032039\|Ga0318559_10047596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1784	Open in IMG/M
3300032041\|Ga0318549_10513248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300032064\|Ga0318510_10049763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1479	Open in IMG/M
3300032091\|Ga0318577_10338996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora mzabensis	719	Open in IMG/M
3300032180\|Ga0307471_101807511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M
3300032770\|Ga0335085_10857546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	994	Open in IMG/M
3300032770\|Ga0335085_11234864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	792	Open in IMG/M
3300032805\|Ga0335078_10965509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1014	Open in IMG/M
3300032895\|Ga0335074_10537944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1194	Open in IMG/M
3300032896\|Ga0335075_10060929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5185	Open in IMG/M
3300033289\|Ga0310914_10899828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora mzabensis	784	Open in IMG/M
3300034268\|Ga0372943_0130785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1509	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.09%
Host-Associated	Host-Associated	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.82%
Aquatic	Environmental → Aquatic	7.27%
Plants	Host-Associated → Plants	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.00%
Freshwater	Environmental → Aquatic → Freshwater	5.45%
Peat	Environmental → Terrestrial → Peat	1.82%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.91%
Sediment	Environmental → Aquatic → Sediment	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.91%
Loam	Environmental → Terrestrial → Soil → Loam	8.18%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.91%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.64%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.91%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.55%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.64%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.82%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.82%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.91%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.91%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.91%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.91%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.91%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001408	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015090	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5A, Northern proglacial tributary margin, adjacent to top of river)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20206J14855_10132571	3300001408	Arctic Peat Soil	YLTWRYDGDPAPASARDAAERIGWQAHTVAKRCENIRDRYVRLGVPGLRGPRALEELALLLISTGELTAADLRRLPAKTPPG*
Ga0062386_1015410191	3300004152	Bog Forest Soil	LPDLDDDSEDDETGELQVTEPVSEVVQERTVTSTKLRKPLSDSDRLVLAARFEDYLTWKHSGAPAPRSARDAAERIGWQPHTVSKRCENIRNRYVRIGVPGLRGPRALDELAALLISNGELTGDDLRRLPPQAC*
Ga0066388_1004486323	3300005332	Tropical Forest Soil	GPGQGGKIPASPTGERLVTSTRRRPPLSGPDRLILAARFEDYLDWRHTGPAAPRSAKQTAERIGWQAHTVAKRCENIRDRYSRLGMPGLRGPRALEELGMLLISTGDLTADDLRRLPSRAPARQGPG*
Ga0066388_1027554392	3300005332	Tropical Forest Soil	YLNWRHTGAAAPRSAKQAADRIGWQAHAVVKRCENIRDRYARLGVPGLRGPRALEELAMLLISTGELTADDLQRLPRQAHVRHPAA*
Ga0070691_110446252	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	RFEDYLTWRHAGAPAPRSAAETARRIGWEPHTVVKRCENIRNRYTRMGIPGLRGPRALEELIRLLMSTGTLTADDLRRLPPRPEPG*
Ga0066681_105596182	3300005451	Soil	WRHTGPAAPRSAKQTAERIGWQPHTVAKRCENIRDRYSRLGVPGLRGPRALDELAMLLISTGELTAGDLRRLSSQAAVGQDQG*
Ga0070707_1001319151	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GGEPPVTGERAVTSTRYRARLNDSDRLVLAARFEAYLARRHAGDPAPASAREAAERIGWQAHTVAKRCENIRNRYARLGAPGLRGPRALEELALLLISTGELTSADLQRLPASTPPG*
Ga0066670_102944211	3300005560	Soil	ILAARFEDYLDWRHTGPAAPRSAKQTAERIGWQPHTVAKRCENIRDRYSRLGVPGLRGPRALDELAMLLISTGELTAGDLRRLSSQAAVGQDQG*
Ga0066903_1025762681	3300005764	Tropical Forest Soil	PGQRPPVTGEMLVTSSRNRPRLTDDDRMVLAARFEDYLTWRHAGSPAPRSARDTAQRIGWLPHTVAKRCENIRNRYVRLGVPGLRGPRALDELARLLVSTGELTAADLRRLPAPAAPG*
Ga0066790_104364921	3300005995	Soil	VTSTRYRAVLTGSDRLVLAARFEAYLTWRHAGDPAPASARHTAERIGWQAHAVAKRCENIRDRYVRLGARGLRGPRALEELALLLVSTGELTAADLQRLPAKASAG*
Ga0070717_104646401	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LRLRLPDLDDLPDPADEPRLTYVTGERAVTSTRYRAPLTDSDRLVLAARFEAYLTWRHAGDQAPASAKETAERIGWNPHAVAKRCENIRARYVRLGAPGLRGPRALEELALLLVSTGELTAADLRRLPAKAAPG*
Ga0075017_1006678882	3300006059	Watersheds	DRLVLAARFEAYLTWRHAGEPAPRSARATAERIGWQAHTVAKRCENIRNRYVRMGFPGLRGPRALDELALLLVSTGELTAADLRRLPPAVPPDGPAAGR*
Ga0070712_1003350582	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ILAARFEDYLNWRHTGAAAPRSAKEAADRIGWQAHTVAKRCENIRDRYARLGVPGLRGARALEELAMLLISTAELTADDLRRLPRQVDASHPAV*
Ga0075425_1019246322	3300006854	Populus Rhizosphere	VLAARFEEYLTWRHVGEPAPRSAAETAARIGWQPHTVIKRCENIRNRYIKSAAPGLRGPRALEELIRLLMSTGVLDADDLRRLPPASGSS*
Ga0073928_102387011	3300006893	Iron-Sulfur Acid Spring	RFEAYLARRHAGDPAPASAREAAERIGWQAHVVAKRCENIRNRYARLGVPGLRGPRALDELALLLISTGELTAADLQRLPAGAPPD*
Ga0099830_102804952	3300009088	Vadose Zone Soil	DRLVLAARFEEYLTWRHAGDPSPRSARETADRIGWQPHTVSKRCENIRNRYVRLGVAGLRGPRALEELAVLLISTGELTTTDLQRLPRDNPG*
Ga0116134_11524271	3300009764	Peatland	RLVLAARFEAYLAWRHAGDPAPASARDTAERIGWQAHTVAKRCENIRDRYVRLGVPGLRGPRALEELALLLVSTGELTAADLRRLPARDLPG*
Ga0126374_101546303	3300009792	Tropical Forest Soil	PPRPESVVTSTHQLLALSDSDRLVLAARFEDYLTWRHEGAAAPRSAAEAAERIGWQPHTVTKRCENIRMRYVRAGVPGLRGPRALDELARLLVSTGELTAADLRRLPAPAAPG*
Ga0126374_105700311	3300009792	Tropical Forest Soil	RFEAYLTWRHAGEPAPASAKETAERIGWNPHAVTKRCENIRARYVRLGAPGLRGPRALEELALLLVSTGELTAADLQRLPAKAAPA*
Ga0126380_122737581	3300010043	Tropical Forest Soil	RAPRAPATSGTGEQQLTTSKRRAPLTDSDRLILAARFEQYLNWRHVGPAAPRSAKETADRIGWQPHTVAKRCENIRSRYSRLSVPGLRGPQALEELAMLLISTGELTAEDLRRLPDPPKP
Ga0126384_100939352	3300010046	Tropical Forest Soil	LAARFGDYLNWRHAGPAAPRSAKQTAARIGWQVHTVAKRCENIRDRYSRLGVPGLRGPRALDELAMLLISTGELTAGDLRRLPSEAGAGPARSVSLMPSGGVLAPS*
Ga0126382_109405742	3300010047	Tropical Forest Soil	DYLNWRHTGPAAPRSATQAAGRIGWQAHTVAKRCENIRDRYARLGVPGLRGPRALEELAMLLISTGELTADDLQRLPRQAHLGQPAA*
Ga0126373_116629101	3300010048	Tropical Forest Soil	KPEYVTGERSVTATRFRAPLTDSDRLVLAARFEAYLTWRHAGEPAPASAKDTAERIGWNAHAVTKRCENIRARYVRLGAPGLRGPRALEELALLLVSTGELTAADLQRLPAKAAPA*
Ga0126376_128328122	3300010359	Tropical Forest Soil	VLAARFEEYLDWRHVGEPGPRSARQAAGRIGWEPHAVAKRCENIRNRYAKHGVAELRGPRALAEFAALLISTGELTADDLRRLPPPAGP*
Ga0126372_106785431	3300010360	Tropical Forest Soil	PKPEYVTGERSVTATRFRAPLTDSDRLVLAARFEAYLTWRHAGEPAPASAKDTAERIGWNAHAVTKRCENIRARYVRLGAPGLRGPRALEELALLLVSTGELTAADLQRLPAKAAPA*
Ga0126372_126780822	3300010360	Tropical Forest Soil	LPDLDDIPDPADEPKPEYVTGERSVTATRFRAPLTDSDRLVLAARFEAYLTWRHAGDPAPASAKDTAERIGWNPHAVTKRCENIRARYVRLGAPGLRGPRALEELALLLVSTGELTAADLQRLPAKAAPG*
Ga0126378_110546862	3300010361	Tropical Forest Soil	AATSSRYRAPLNDDDRLVLAARFAAYLDRRHPADPAPHSAREAAERIGWQAHTVAKRCENIRARYARLGVPGLRGPRALEELALLLVSTGELTTADLRRLPAEVPPRHS*
Ga0126378_111658581	3300010361	Tropical Forest Soil	ILAARFEDYLNWRHTGPAAPRSAAQAADRIGWRAHTVAKRCENIRDRFARLGVPGLRGPRALEELAMLLISTGELTADDLQRLPRQAHLGQPAA*
Ga0126378_130929921	3300010361	Tropical Forest Soil	NGAQGQYTLRLRLPDLDDVPDPGQQHPATGERAVTDTRRAVRLTDDDRLVLAARFEAYLTWRHTGEPAPRSARATAERIGWSAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLVSSGELTAADLRRLPATAPPG*
Ga0126379_104242472	3300010366	Tropical Forest Soil	VNGAQSQYTLRLRLPDLDDVPDPGQRPPVTGERAVTDTRRPVRLTDDDRLVLAARFEAYLTWRHAGEPAPRSARATAERIGWQAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLISTGELTAADLQRLPATASPG*
Ga0126379_104957841	3300010366	Tropical Forest Soil	TRFRAPLTDSDRLVLAARFEAYLTWRHVGEPAPASAKETAERIGWNAHAVTKRCENIRARYVRLGAPGLRGPRALEELALLLVSTGELTAADLQRLPAKAAPA*
Ga0126381_1035244421	3300010376	Tropical Forest Soil	DADRLVLAARFEDYLTWKHSGAAVPRSAREAAERIGWQPHAVAKRCENIRNRYVRIGVPGLRGQRALEELAALLISTGELTGDDLRRLPPLSPAGLTPPATHSMIDVDPGGR*
Ga0136449_1031638461	3300010379	Peatlands Soil	EHAVTSTRYRAPLTSGDRLVLAARFESYLTWRHDGDPAPASARDTAERIGWQAHTVAKRCENIRDRYVRLGVPGLRGPRALEELALLLISTGELTSADLQRLPAMTPPS*
Ga0137391_108178701	3300011270	Vadose Zone Soil	DAPDPAEQAPVAAGTGEGAVTSTRYRAPLTGSDRLVLAARFEEYLTWRHAGVPAPASARDTAERIGWQAHTVAKRCENIRARYARLGVPGLGGPRALEQLALLLVSTGELTAADLQLLPAKASPG*
Ga0137391_108491801	3300011270	Vadose Zone Soil	STRCRPPLNETDRLILAARFEDYLSWRHAGAAAPRSAKQTAGRIGWQPHTVAKRCENIRDRYVRLGVPGLCGPRALEELAMLLISTGERTADDLRRLPCQADPDHSAA*
Ga0137391_115700041	3300011270	Vadose Zone Soil	LTWRHAGNPAPASARETAERIGWQAHTVAKRCENIRDRYARLGVPGLRGPRALEQLALLLVSTGELTAADLQLLPAKAQSG*
Ga0137365_100586424	3300012201	Vadose Zone Soil	DRLVLAARFEQYLSWRHTGPAAPRSAKETADRIGWQPHTVAKRCENIRDRYSRLGVPGLRGPQALEGLAMLLTSTGELTAEDLRRLPSPPKP*
Ga0137365_100933801	3300012201	Vadose Zone Soil	MRAFAAHRASPGPPAARHTGDPAPASAKDAAERIGWQSHTVAKRCENIRDRYVRLGVPGLRGPRALEELALLLISTGELTAEDL
Ga0137365_108042451	3300012201	Vadose Zone Soil	MARQGDRDRGAGSYTLRLRLPDLDDVPDPGQRPPATGERAVTSTRYRARLTDDDRLVLAARFEAYLTWRHAGDLAPRSARETAQRIGWQAHVVVKRCENIRNRYVRMGFPGLRGPRALEELALLLVSSGELTAADLRRLPAETAPG*
Ga0137363_117984121	3300012202	Vadose Zone Soil	DDDRLVLAARFEQYLNWRHAGAPAPRSARATAERIGWQPHAVAKRCENLRDRYARLGVPGLRGPRALEELAALLISTGELTAEDVRRLPEQTPPG*
Ga0137399_107366492	3300012203	Vadose Zone Soil	DRLVLAARFEAYLTWRHAGVPAPASARDTAERIGWQAHTVAKRCENIRARYARLGVPGLGGPRALEQLALLLVSTGELTAADLQLLPAKASPG*
Ga0137379_100733901	3300012209	Vadose Zone Soil	VLAARFEEYLTWRHTGAPAPRTAKEAAERIGWQPHAVAKRCENLRDRYARLGVPGLRGPRALEDLATLLISTGELTAEDLRRLPSETPSG*
Ga0137379_102288381	3300012209	Vadose Zone Soil	LCLAARFEDYLDWRHTGDPTPRSARETAERIGWQAHTVAKRCENIRDRYVRLGAPGLRGARALDELARLLISTGHLTAADLKRLPEKAAPG*
Ga0137378_111576211	3300012210	Vadose Zone Soil	VTSTRYRARLNDSDRLVLAARFEAYLARRHAGNPAPASAREAAERIGWQAHTVAKRCENIRNRYARLGAPGLRGPRALEELALLLISTGELTSADLQRLPASTPPG*
Ga0137369_102487951	3300012355	Vadose Zone Soil	DGDRLVLAARFEDYLTWRHAGAPAPRSAAETAERIGWQTHTVAKRCENIRNRFTRLGIPGLRGPRALEELARLLISTGTLTADDLRCLPPKATPG*
Ga0137368_101553221	3300012358	Vadose Zone Soil	PESIVTSTHYRPSLSDGDRLVLAARFEDYLTWRHAGAPAPRSAAETAERIGWQTHTVAKRCENIRNRFTRLGIPGLRGPRALEELARLLISTGTLTADDLRCLPPKATPG*
Ga0137385_100903783	3300012359	Vadose Zone Soil	VTSTRYRARLNDSDRLVLAARFEAYLARRHAGNPAPASAREAAERIGWQAHTVAKRCENIRNRYARLGAPGLRGPRALEERALLLISTGELTAADLRRLPASTPPG*
Ga0137390_116420422	3300012363	Vadose Zone Soil	VVTSTRYRARLTGSDRLVLAARFEAYLTWRHAGARDTAERIGWQAHTVAKRCENIRDRYVRLGVPGLRGPRALDELELLLISTGERTTEDLRR
Ga0137397_107564521	3300012685	Vadose Zone Soil	YTLRLRLPGLDDLPVPGGQRPGPGEAAVTSTRYRAPLTGTDRLVLAARFEESLTWRHARVPAPASARDTAERIGWQAHTVAKRCENIRARYARLGIPGLGGPRALEQLALLLVSTGELTAADLQLLPAKASPG*
Ga0137404_112698421	3300012929	Vadose Zone Soil	PAKRRRARPESIVTSTHYRPSLSEGDRLVLAARFEEYLTWRHAGAPAPRSAAETAERIGWQTHTVAKRCENIRNRFTRLGIPGLRGPRALEELARLLISTGTLTADDLRCLPPKATPG*
Ga0137404_112979511	3300012929	Vadose Zone Soil	TLNEGDRLVLAARFEEYLTWRHAAAPAPRSAAETAERIGWTSHAVTKRCENIRNRYTRLGVPGLRGPRALEELIRLLMSTGTLTQEDLRRLPPSPAPQS*
Ga0137407_100252987	3300012930	Vadose Zone Soil	VTGESAVTSTRYRARLNDSDRLVLAARFEAYLARRHAGDPAPASAREAAERIGWQAHTVAKRCENIRNRYARRGAPGLRGPRALEELALLLISTGELTAADLRRLPASTPPG*
Ga0126369_112313701	3300012971	Tropical Forest Soil	SAGERSVTSTRYRARLTDDDRLVLAARFEAYLTWRHAGEPAPRSARATAERIGWQAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLISTGELTAADLQRLPATASPG*
Ga0126369_126914261	3300012971	Tropical Forest Soil	PGQRPLVSAEHLVTSSRHRPRLTDDDRLVLAARFEAYLTWRHAGDPAPASAKETAERIGWNPHAVTKRCENIRARYVRLGAPGLRGPRALEELALLLVSTGELTAADLQRLPAKAAPG*
Ga0120104_10929801	3300014829	Permafrost	LVLAARFEAYLTWRHAGVPAPASARDTAERIGWQAHTVAKRCENIRDRYVRLGVPGLRGPRALDELALLLISTGELTAEDLRHLPAKAASG*
Ga0167634_10251392	3300015090	Glacier Forefield Soil	MDDPDVTSTRLRLPLNEQDRLVLAARFEDYLTRGPAGPPVPRSAREAACRIGWQPHTVAKRCENIRERYARLGVPGLRGPRALDELATLLISTGELTATDLHRLPAAVRPG*
Ga0182035_106830951	3300016341	Soil	TLRLRLPDLDDVPDPADEPKPEYVTGERSVTATRFRAPLTDSDRLVLAARFEAYLTWRHAGDPAPASAKETAERIGWNPHAVTKRCENIRARYVRLGAPGLRGPRALEELALLLVSTGELTAADLQRLPAKAAPG
Ga0182032_102276722	3300016357	Soil	QGQYTLRLRLPDLDDVPDPGQRSPVTGERAVTASRRRVRLTDDDRLVLAARFEAYLTWRHAGEPAPRSARATAERIGWSAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLVSTGELTAADLRRLPATAPPG
Ga0187807_11261041	3300017926	Freshwater Sediment	EYLTWRHAGVPAPASARDAAERIGWQAHTVAKRCENIRARYARLGIAGLRGPRALEQLALLLVSTSELTAAGLQLLPARA
Ga0187806_13818491	3300017928	Freshwater Sediment	HAVTSTRYRAPLTGSDRLVLAARFESYLTWRHDGDPAPASARDTAERIGWQSHTVAKRCENIRDRYVRLGVPGLRGPRALEELALLLISTGELTAADLHRLPA
Ga0187786_104122012	3300017944	Tropical Peatland	LVTSSRNRPRLTDDDRLVLAARFEDYLTWRHAGEPAPRSARDTAQRIGWQPHTVAKRCENIRNRYVRLGVPGLRGPRALHELARLLVSTGELTAADLRRLPAPAGPG
Ga0187779_105405472	3300017959	Tropical Peatland	LRLRLPDLDEVPDPGQQPPATGERAVTASRRRVRLTDDDRLVLAARFEAYLIWRHAGEPAPRSARATAERIGWQAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLVSTGELTAADLRRLPAPSPPG
Ga0187778_106389822	3300017961	Tropical Peatland	RVRLTDDDRLVLAARFEAYLTWRHAGEPAPRSARATAERIGWQAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLVSTGELTAADLRRLPASSPPG
Ga0187776_116100781	3300017966	Tropical Peatland	GGEPGQASDRSVPPSRLSSGEQVVTSTRYRAHLTEADRLVLAARFEEYLNWRFAGAPAPQSAKETAERIGWQPHTVAKRCENLRDRFARLGVPGLHGPRALEELAAFLISTDMLTAEDLHRLPTTAPTP
Ga0187884_102274832	3300018009	Peatland	ARFEAYLTFRQTGNPAPASARDTAERIGWQAHTVAKRCENIRDRYVRLGVPGLRGPRALEELALLLVSTGELTAADLRRLPARDLPG
Ga0206353_109239721	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	SVVTATHTKLPLTDGDRLVLAARFEDYLTWRHAGAPAPRSAAETARRIGWEPHTVVKRCENIRNRYTRMGIPGLRGPRALEELIRLLMSTGTLTADDLRRLPPRPEPG
Ga0210401_104950191	3300020583	Soil	TSTRYRAPLTGSDRLVLAARFEEYLTWRHAGVPAPASARDTGQRIGWAAHTVAKRCENIRARYARLGVPGLGGPRALEQLALLLVSTGELTAADLQLLPARA
Ga0210396_101326023	3300021180	Soil	TSTRYRAPLTGSDRLVLAARFEEYLTWRHAGVPAPASARDTAERIGWQAHTVAKRCENIRARYARLGVPGLGGPRALEQLALLLVSTGELTAADLQLLPTRAAPG
Ga0210383_107906522	3300021407	Soil	LVLAARFEEYLTWRHAGVPAPASARDAAERIGWQAHTVAKRCENIRARYARLGVPGLGGPRALEQLALLLVSTGELTAADLQLLPAKAAPG
Ga0210394_112387961	3300021420	Soil	GEVTGTHSLIPLTGSDRLVLAARFEEYLTWRHAGVPAPASARDAAERIGWQAHTVAKRCENIRARYARLGVPGLGGPRALEQLALLLVSTGELTAADLQLLPAKAAPG
Ga0210398_101367431	3300021477	Soil	GSDRLVLAARFEEYLTWRHAGVPAPASARDAAERIGWQAHTVAKRCENIRARYARLGVPGLGGPRALEQLALLLVSTGELTAADLQLLPAKAAPG
Ga0210398_114450321	3300021477	Soil	LPGLDDAPDPAEQASAGHAAGEPEVTSTRYRAPLTGSDRLVLAARFEAYLTWRHAGTPAPASAKDTAERIGWQAHTVAKRCENVRARYARLGVPGLRGPRALEQLALLLTSTGELTAADLQLLPAKPSPG
Ga0126371_108154282	3300021560	Tropical Forest Soil	RLVLAARFEEYLDWRHVGEPSPRSAKQAADRIGWDPHTVSKRCENIRNRYARVGVAELRGPRALAELAALLISTGELTAEDLRRLPPVSS
Ga0126371_138960892	3300021560	Tropical Forest Soil	NWRHTGAAAPRSARQAADRIGWQAHAVAKRCENIRDRYARLGVPGLRGPRALEELAILLISTGELTAGDLQRLPRHAHAGLPAGPAGAELWPARN
Ga0213853_103388461	3300021861	Watersheds	DEPADGPTMPASLVTSTQSQPRLSDDDRLVLAARFEEYLTWRHVGAPAPRSAAETAERIGWQTHTVIKRCENIRNRHIRSGAPGLRGPHALEDLVRLLMSTGTLTADDLRRLPPKAESG
Ga0208220_10322671	3300025627	Arctic Peat Soil	GEHAVTSTRYRAPLTGSDRLVLAARFESYLTWRYDGDPAPASARDAAERIGWQAHTVAKRCENIRDRYVRLGVPGLRGPRALEELALLLISTGELTAADLRRLPAKTPPG
Ga0208220_11600961	3300025627	Arctic Peat Soil	TGSDRLVLAARFEAYLNWRHAGPQAPASARDTAERIGWAAHTVAKRCENIRGRYARLGVPGLRGPRALEQLALLLVSTGELTAADLRLLPAKVPPR
Ga0207646_115242421	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GGEPPVTGERAVTSTRYRARLNDSDRLVLAARFEAYLARRHAGDPAPASAREAAERIGWQAHTVAKRCENIRNRYARLGAPGLRGPRALEELALLLISTGELTSADLQRLPASTPPG
Ga0209350_11430651	3300026277	Grasslands Soil	TDDDRLVLAARFEAYLTWRHAGDPGPRSARDTAQRIGWQSHAVAKRCENIRNRYVRLGVPGLRGPRALDELARLLVSTGELTAADLRRLPAPAAPG
Ga0209839_100098784	3300026294	Soil	PLTDTDRLVLAARFEAYLAWRHAGDPAPASAKDAAVRIGWQAHTVAKRCENIRDRYVRLGVPGLRGPRALEELALLLISTGELTAADLRCLPAKAPPG
Ga0209839_102866961	3300026294	Soil	PDLDDLPDPAEEAPVPYVTGERAVTSTRHRAPLTSSDRLVLAARFEAYLTWRHAGDPAPASARHTAERIGWQAHAVAKRCENIRDRYVRLGARGLRGPRALEELALLLVSTGELTAADLQRLPAQPPAA
Ga0209239_12042441	3300026310	Grasslands Soil	PPLASGEHLVTSSRHRPRLTDDDRLVLAARFEAYLTWRHAGDPGPRSARDTAQRIGWQSHAVAKRCENIRNRYVRLGVPGLRGPRALDELARLLVSTGELTAADLRRLPAPAAPG
Ga0209056_103147702	3300026538	Soil	WRHTGPAAPRSAKQTAERIGWQPHTVAKRCENIRDRYSRLGVPGLRGPRALDELAMLLISTGELTAGDLRRLSSQAAVGQDQG
Ga0209074_100970251	3300027787	Agricultural Soil	NWRHAGPPAPRSAKETAERIGWQAHTVAKRCENIRDRYSRLGVPGLRGPRALEELATLLISTGELTASDLRRLPREARTGQPAA
Ga0209488_103784261	3300027903	Vadose Zone Soil	ILTYVTGERVVTSTRYRAPLTDSDRLVLAARFEAYLTWRHAGDPAPASARDTAERIGWQAHTVAKRCENIRDRYVRLGVPGLRGPRALDELALLLISTGELTGSPRMSVVDW
Ga0209488_111937471	3300027903	Vadose Zone Soil	RAPLTETDRLVLAARFEEYLTWRHAGDPSPRSARETADRIGWQPHTVSKRCENIRNRYVRLGVAGLRGPRALEELAVLLISTGELTTTDLQRLPRDNPG
Ga0209526_109882051	3300028047	Forest Soil	EAYLTWRQAGEPTPRSARDTAQRIGWQAHTVAKRCENIRDRYARLGVPGLRGPRALEELALLLISTGELTVGDLRRLPAEAPRS
Ga0307292_100765931	3300028811	Soil	AYLTWRHAGDPVPRSARETAQRIGWPAHAVVKRCENIRNRYVRMGFPGLRGPRALEELALLLVSSGELTAADLRRLPAETAPG
Ga0311334_113556111	3300029987	Fen	AGAPTRGAMDDPDVTSTRLRLPLNEQDRLVLAARFEDYLTRGPAGPPVPRSAREAACRIGWQPHTVAKRCENIRERYARLGVPGLRGPRALDELATLLISTGELTATDLHRLPAAVRPG
Ga0311350_104864822	3300030002	Fen	PLNEQDRLVLAARFEDYLTRGPAGPPVPRSAREAACRIGWQPHTVAKRCENIRERYARLGVPGLRGPRALDELATLLISTGELTATDLHRLPAAVRPG
Ga0170824_1173590982	3300031231	Forest Soil	PLTDSDRLVLAARFEQYLIWRHGGAAAPRSAKDTAERIGWQPHTVAKRCENIRDRYSRLGVLGLRGPRALEALAELLISTGELTAEDLRRLPSQAHPG
Ga0318555_100181834	3300031640	Soil	LNGAQGQYTLRLRLPDLDDVPDPGQRSPVTGERAVTASRRRVRLTDDDRLVLAARFEAYLTWRHTGEPAPRSARATAERIGWSAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLVSTGELTAADLRRLPATAPPG
Ga0318496_107639892	3300031713	Soil	GERAVTAPRLRPPLTERDRLVLAARFEEYLTWRHAGDPVPASAKETAERIGWNPHAVAKRCENIRARYVRLGAPGLRGPRALEELALLLVSTGELSAADLRRLPARVAPG
Ga0318494_107811022	3300031751	Soil	LPDLDDVPDPADEPKPEYVTGERSVTATRFRAPLTDSDRLVLAARFEAYLTWRHAGEPAPASAKDTAERIGWNAHAVTKRCENIRARYVRLGAPGLRGPRALEELALLLVSTGELTAADLQRLPAKAAPG
Ga0306919_101975661	3300031879	Soil	QRSPVTGERAVTASRRRVRLTDDDRLVLAARFEAYLTWRHAGEPAPRSARATAERIGWSAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLVSTGELTAADLRRLPATAPPG
Ga0306921_104120883	3300031912	Soil	ERAVTASRRRVRLTDDDRLVLAARFEAYLTWRHAGEPAPRSARATAERIGWSAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLVSTGELTAADLRRLPATAPPG
Ga0306926_101412534	3300031954	Soil	RRVRLTDDDRLVLAARFEAYLTWRHAGEPAPRSARATAERIGWSAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLVSTGELTAADLRRLPATAPPG
Ga0306922_114777442	3300032001	Soil	PVTGERAVTASRRRVRLTDDDRLVLAARFEAYLTWRHAGEPAPRSARATAERIGWSAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLVSTGELTAADLRRLPATAPPG
Ga0318559_100475961	3300032039	Soil	HSVTTTRYRARLTDSDRLVLAARFEEYLTWRHVGDPAPRSARDTAERIGWQAHTVTKRCENIRDRYARLLVSTGELTADDLKRLPAKASP
Ga0318549_105132482	3300032041	Soil	PSPGTASRRRVRLTDDDRLVLAARFEAYLTWRHAGEPAPRSARATAERIGWSAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLVSTGELTAADLRRLPATAPPG
Ga0318510_100497633	3300032064	Soil	AYLTWRHAGEPAPRSARATAERIGWSAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLVSTGELTAADLRRLPATAPPG
Ga0318577_103389962	3300032091	Soil	LNRAQGQYTLRLRLPDLDDVPDPGQRSPATGERAVTASRRRVRLTDDDRLVLAARFEAYLTWRHAGEPAPRSARATAERIGWSAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLVSTGELTAADLRRLPATAPPG
Ga0307471_1018075111	3300032180	Hardwood Forest Soil	YLTWRHTGAAAPRSAKQTAERIGWQAHTVAKRCENIRDRYSRLGVPGLRGSRALEELAMLLISTGELTADDLRRLPCQSDPGQSAA
Ga0335085_108575461	3300032770	Soil	TQVPAGPASIETSTHRPPKLSDDDRMVLAARFEEYLTWRHVGEPAPKSAAETAARIGWQPHTVIKRCENIRNRYIRSGFPGLRGPRALEDLIRLLMSTGALDADDLRRLPPSARARSS
Ga0335085_112348641	3300032770	Soil	GQRPPVTGEMLVTSSRNRPRLTDDDRMVLAARFEDYLTWRHAGSPAPRSARETAQRIGWLPHTVAKRCENIRNRYVRLGVPGLRGPRALDELARLLVSTGELTAADLRRLPAPAAPG
Ga0335078_109655092	3300032805	Soil	ALDNYTLRLRLPDLDDVPDPSPEYVTGERAVTATRYRARLSDSDRLVLAARFEEYLDWRHTGDPTPRSAKQTAERIGWQAHTVAKRCENIRDRYVRLGAPGLRGARALDELARLLISTGQLTAEDVKRLPEKAAPS
Ga0335074_105379441	3300032895	Soil	LRLRLRLPDLNDVPEPGTRPPGARESSVTSTRYRIELNDDRLVLAARFEAYLVRRGGGNPAPHSARQAAERIGWGAHTVAKRCENIRNRYVRLGAPGLRGPRALEELALLLISTGELAPADLRQLPASTSPG
Ga0335075_100609297	3300032896	Soil	MSRNPEPGTRPPGARESSATSTRYRIELNDDDRLVLAARFEAYLARRGGGNPAPHSARQAAERIGWGAHTVAKRCENIRNRYVRLGAPGLRGPRALEELALLLISTGELAPADLRQLPASTSPG
Ga0310914_108998281	3300033289	Soil	LRLRLPDLDDVPDPGQRSPATGERAVTASRRRVRLTDDDRLVLAARFEAYLTWRHAGEPAPRSARATAERIGWSAHAVAKRCENIRNRYVRMGFPGLRGPRALDELALLLVSTGELTAADLRRLPATAPPG
Ga0372943_0130785_1166_1507	3300034268	Soil	EHAITTIRFRPRLTDSDRLVLAARFEKYLTWRYPGAAAPCTARDAAERISWKPHAVVKRCENIRERYARHGAPGLRGPRALEELAALLTSTGELTAADLRRLPAPSLVAPGTG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087575

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences