Metagenome / Metatranscriptome Family F087563

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087563
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	83 residues
Representative Sequence	RLAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSSR
Number of Associated Samples	100
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	20.00 %
% of genes near scaffold ends (potentially truncated)	32.73 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.636 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.182 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.636 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 27.71% β-sheet: 13.25% Coil/Unstructured: 59.04%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF03992	ABM	26.36
PF01145	Band_7	10.00
PF03861	ANTAR	7.27
PF00990	GGDEF	6.36
PF01966	HD	5.45
PF01593	Amino_oxidase	1.82
PF03706	LPG_synthase_TM	1.82
PF00664	ABC_membrane	0.91
PF13302	Acetyltransf_3	0.91
PF13407	Peripla_BP_4	0.91
PF13411	MerR_1	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	7.27
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	1.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.64 %
Unclassified	root	N/A	46.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.64 %
Unclassified	root	N/A	46.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.64 %
Unclassified	root	N/A	46.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.18 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.36 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.27 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.36 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	9.09 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.36 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.36 %
Miltoncostaeales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales	2.73 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.73 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	1.82 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.91 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.91 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.36 %
Miltoncostaeaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae	2.73 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	1.82 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	1.82 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.91 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.36 %
Miltoncostaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea	2.73 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1.82 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1.82 %
Thermoleophilum	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum	1.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.91 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.36 %
Miltoncostaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea	2.73 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	1.82 %
unclassified Conexibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter	1.82 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	1.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.91 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.36 %
Miltoncostaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea	2.73 %
Nocardioides sp. LS1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	1.82 %
Conexibacter sp. S30A1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	1.82 %
Thermoleophilum album	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	1.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.91 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.91 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120928820	All Organisms → cellular organisms → Bacteria	2464	Open in IMG/M
3300004156\|Ga0062589_101090161	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300004479\|Ga0062595_100002159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4770	Open in IMG/M
3300005093\|Ga0062594_102537691	Not Available	564	Open in IMG/M
3300005329\|Ga0070683_100009222	All Organisms → cellular organisms → Bacteria	8430	Open in IMG/M
3300005329\|Ga0070683_100610767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1044	Open in IMG/M
3300005330\|Ga0070690_100714581	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300005336\|Ga0070680_101163137	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005337\|Ga0070682_100108942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1842	Open in IMG/M
3300005338\|Ga0068868_100072728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2743	Open in IMG/M
3300005339\|Ga0070660_100527201	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300005343\|Ga0070687_100174603	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300005366\|Ga0070659_100077181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2656	Open in IMG/M
3300005366\|Ga0070659_102104941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300005438\|Ga0070701_10500663	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300005439\|Ga0070711_101704292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	552	Open in IMG/M
3300005444\|Ga0070694_100448088	Not Available	1019	Open in IMG/M
3300005530\|Ga0070679_100870279	Not Available	844	Open in IMG/M
3300005535\|Ga0070684_100433488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1214	Open in IMG/M
3300005539\|Ga0068853_100422111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	1251	Open in IMG/M
3300005545\|Ga0070695_100778128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album	765	Open in IMG/M
3300005549\|Ga0070704_100243528	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300005564\|Ga0070664_100160868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1986	Open in IMG/M
3300005614\|Ga0068856_102199217	Not Available	560	Open in IMG/M
3300005617\|Ga0068859_100137277	All Organisms → cellular organisms → Bacteria	2519	Open in IMG/M
3300005718\|Ga0068866_10502257	Not Available	803	Open in IMG/M
3300005718\|Ga0068866_10930396	Not Available	613	Open in IMG/M
3300005841\|Ga0068863_102241687	Not Available	556	Open in IMG/M
3300005842\|Ga0068858_101568640	Not Available	650	Open in IMG/M
3300006175\|Ga0070712_100466091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1054	Open in IMG/M
3300006237\|Ga0097621_102053117	Not Available	546	Open in IMG/M
3300006573\|Ga0074055_11449226	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300006576\|Ga0074047_11854255	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300006577\|Ga0074050_12087945	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300006578\|Ga0074059_12068313	Not Available	533	Open in IMG/M
3300006579\|Ga0074054_12022084	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300006580\|Ga0074049_13056269	Not Available	765	Open in IMG/M
3300006581\|Ga0074048_13114984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	793	Open in IMG/M
3300006605\|Ga0074057_10018298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	730	Open in IMG/M
3300006606\|Ga0074062_12770077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1937	Open in IMG/M
3300006845\|Ga0075421_100905292	Not Available	1006	Open in IMG/M
3300006904\|Ga0075424_100001957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18519	Open in IMG/M
3300009094\|Ga0111539_12756214	Not Available	569	Open in IMG/M
3300009098\|Ga0105245_10019852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5890	Open in IMG/M
3300009148\|Ga0105243_10032055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4056	Open in IMG/M
3300009174\|Ga0105241_11268717	Not Available	700	Open in IMG/M
3300009177\|Ga0105248_11260154	Not Available	836	Open in IMG/M
3300010375\|Ga0105239_10127626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2828	Open in IMG/M
3300010403\|Ga0134123_12498266	Not Available	583	Open in IMG/M
3300011119\|Ga0105246_11035072	Not Available	745	Open in IMG/M
3300012285\|Ga0137370_10300379	Not Available	959	Open in IMG/M
3300012494\|Ga0157341_1024089	Not Available	620	Open in IMG/M
3300012957\|Ga0164303_10671622	Not Available	694	Open in IMG/M
3300012958\|Ga0164299_10114359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1429	Open in IMG/M
3300012960\|Ga0164301_10125807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	1523	Open in IMG/M
3300012961\|Ga0164302_10267783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1096	Open in IMG/M
3300012984\|Ga0164309_10560060	Not Available	886	Open in IMG/M
3300012984\|Ga0164309_11441294	Not Available	588	Open in IMG/M
3300012986\|Ga0164304_10127407	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300012988\|Ga0164306_10304901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1164	Open in IMG/M
3300012989\|Ga0164305_10455203	Not Available	995	Open in IMG/M
3300013100\|Ga0157373_11097599	Not Available	597	Open in IMG/M
3300013102\|Ga0157371_10573050	Not Available	838	Open in IMG/M
3300013296\|Ga0157374_10270258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1676	Open in IMG/M
3300013306\|Ga0163162_11055223	Not Available	920	Open in IMG/M
3300013307\|Ga0157372_10357788	Not Available	1701	Open in IMG/M
3300013308\|Ga0157375_10244033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1956	Open in IMG/M
3300014497\|Ga0182008_10860049	Not Available	531	Open in IMG/M
3300014969\|Ga0157376_10932612	Not Available	888	Open in IMG/M
3300015371\|Ga0132258_10000528	All Organisms → cellular organisms → Bacteria	58278	Open in IMG/M
3300015371\|Ga0132258_10827466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2335	Open in IMG/M
3300015371\|Ga0132258_11437001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1742	Open in IMG/M
3300019255\|Ga0184643_1329321	Not Available	576	Open in IMG/M
3300020082\|Ga0206353_11194638	Not Available	974	Open in IMG/M
3300022756\|Ga0222622_11039590	All Organisms → cellular organisms → Bacteria → Terrabacteria group	602	Open in IMG/M
3300025321\|Ga0207656_10024439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2444	Open in IMG/M
3300025899\|Ga0207642_10138404	Not Available	1280	Open in IMG/M
3300025899\|Ga0207642_10151339	Not Available	1235	Open in IMG/M
3300025912\|Ga0207707_10427645	Not Available	1135	Open in IMG/M
3300025918\|Ga0207662_10033283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3004	Open in IMG/M
3300025925\|Ga0207650_11557288	Not Available	561	Open in IMG/M
3300025927\|Ga0207687_10172419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	1670	Open in IMG/M
3300025932\|Ga0207690_11851823	Not Available	504	Open in IMG/M
3300025934\|Ga0207686_10136868	Not Available	1688	Open in IMG/M
3300025935\|Ga0207709_10277318	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1237	Open in IMG/M
3300025945\|Ga0207679_10027141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3957	Open in IMG/M
3300026023\|Ga0207677_10170838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1699	Open in IMG/M
3300026067\|Ga0207678_10847185	Not Available	808	Open in IMG/M
3300026095\|Ga0207676_10530786	Not Available	1122	Open in IMG/M
3300028380\|Ga0268265_11526812	Not Available	672	Open in IMG/M
3300028381\|Ga0268264_11481755	Not Available	689	Open in IMG/M
3300028768\|Ga0307280_10288299	Not Available	597	Open in IMG/M
3300028791\|Ga0307290_10110593	Not Available	1004	Open in IMG/M
3300028793\|Ga0307299_10183165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	788	Open in IMG/M
3300028811\|Ga0307292_10051059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea	1546	Open in IMG/M
3300028824\|Ga0307310_10096081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea	1312	Open in IMG/M
3300028828\|Ga0307312_10080511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1991	Open in IMG/M
3300028828\|Ga0307312_10119084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea	1653	Open in IMG/M
3300028885\|Ga0307304_10490271	Not Available	562	Open in IMG/M
3300031092\|Ga0308204_10333981	Not Available	517	Open in IMG/M
3300031938\|Ga0308175_100139157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. LS1	2310	Open in IMG/M
3300033433\|Ga0326726_10033945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4447	Open in IMG/M
3300033433\|Ga0326726_10696634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	980	Open in IMG/M
3300034090\|Ga0326723_0153668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1011	Open in IMG/M
3300034643\|Ga0370545_176072	Not Available	502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.73%
Host-Associated	Host-Associated	47.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.91%
Plants	Host-Associated → Plants	47.27%
Aquatic	Environmental → Aquatic	1.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.09%
Peat	Environmental → Terrestrial → Peat	2.73%
Freshwater	Environmental → Aquatic → Freshwater	0.91%
Sediment	Environmental → Aquatic → Sediment	0.91%
Roots	Host-Associated → Plants → Roots	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.00%
Loam	Environmental → Terrestrial → Soil → Loam	15.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.73%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.91%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.91%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.91%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.18%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.73%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.73%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1209288204	3300002568	Soil	VNRAAHRLAVSAPVLAALALLGPDSGPALAASTNPASDQYGGGPGLLGESAGGSLPFTGINVIVLLGLGFCMVAAGFAVRRFAGRTASDSHR*
Ga0062589_1010901611	3300004156	Soil	ALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPSSSQ*
Ga0062595_1000021595	3300004479	Soil	MSFLGLGSGSALAASTSPASDQYGGGVLGESAGGSLPFTGLNLIVLLGLGLGMVAVGLAVRRICRSAPDSPR*
Ga0062594_1025376911	3300005093	Soil	VKSIAHRFAVAAPVLTVLALLGPGSGLALAAGTTPASDQYGGGINVLGENGGGGSLPFTGINVIVVLGLGLCMVAVGFAVRRV
Ga0070683_10000922212	3300005329	Corn Rhizosphere	MNGVAHRFAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPSSSQ*
Ga0070683_1006107671	3300005329	Corn Rhizosphere	VKCAPHRFALAAPVFTLMSFLGLGSGSAFAASTSPASDQYGGGVLGESAGGSLPFTGLNLIVLLGLGLGMVAVGLAVRRISRRSAPDSSR*
Ga0070690_1007145812	3300005330	Switchgrass Rhizosphere	VKSIAHRFAVAAPVLTVLALLGPGSGLALAAGTTPASDQYGGGINVLGENGGGGSLPFTGINVIVVLGLGLCMVAVGFAVRRVGPNSRQ*
Ga0070680_1011631372	3300005336	Corn Rhizosphere	AAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGLAVRRVAPNSSR*
Ga0070682_1001089424	3300005337	Corn Rhizosphere	AASAVNGVAHRIAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSTR*
Ga0068868_1000727282	3300005338	Miscanthus Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSTR*
Ga0070660_1005272012	3300005339	Corn Rhizosphere	MLAVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPSSSQ*
Ga0070687_1001746031	3300005343	Switchgrass Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVVLGLGLCMVAVGFAVRRVGPNSRQ*
Ga0070659_1000771811	3300005366	Corn Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINLIVLLGLGLCMVAVGFAVRRVAPSSSQ*
Ga0070659_1021049411	3300005366	Corn Rhizosphere	VKCAPHRFALAAPVFTLMSFLGLGSGSALAASTSPASDQYGGGVLGESAGGSLPFTGLNLIVLLGLGLGMVAVGLAVRRICRSAPDSPR*
Ga0070701_105006631	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VKSIAHRFAVAAPVLTVLALLGPGSGLALAAGTTPASDQYGGGINVLGENGGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVA
Ga0070711_1017042921	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGLAVRRVAPNSSR*
Ga0070694_1004480881	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MNGVAHRFAVAAPMLTVLALLGPGSGLALAASTTPAFDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPSSSQ*
Ga0070678_1002465771	3300005456	Miscanthus Rhizosphere	GSGSALATTTTPASNQYGGGDVLGEATGGSLPFTGINLIVLLGLGLCMVAVGVAVRTVSNSHR*
Ga0070679_1008702792	3300005530	Corn Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRV
Ga0070684_1004334881	3300005535	Corn Rhizosphere	VKCAPHRFALAAPVFTLMSFLGLGSGSAFAASTSPASDQYGGGVLGESAGGSLPFTGLNLIVLLGLGLGMVAVGLAVRRISRRSAPDASR*
Ga0068853_1004221113	3300005539	Corn Rhizosphere	VNGVAHRFAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPSSSQ*
Ga0070695_1007781281	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNST
Ga0070704_1002435282	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENGGGGSLPFTGINVIVVLGLGLCMVAVGFAVRRVGPNSRQ*
Ga0070664_1001608685	3300005564	Corn Rhizosphere	MNGVAHRFAVAAPMLAVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGLAVRRVAPNSSR*
Ga0068856_1021992171	3300005614	Corn Rhizosphere	MNGVAHRFAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVG
Ga0068859_1001372774	3300005617	Switchgrass Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPSSSQ*
Ga0068866_105022572	3300005718	Miscanthus Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVGPNSRQ*
Ga0068866_109303962	3300005718	Miscanthus Rhizosphere	VNRAAERLAVTTPVFAAFALFGLGSGSALATTTTPASNQYGGGDVLGEATGGSLPFTGINLIVLLGLGLCMVAVGVAVRTVSNSHR*
Ga0068863_1022416873	3300005841	Switchgrass Rhizosphere	MLTVLALLGLGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVVLGLGLCMVAVGFAVRRVGPNSRQ*
Ga0068858_1015686403	3300005842	Switchgrass Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVVLGLGLCMVAVG
Ga0070712_1004660911	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGLAVRRVAPSSSR*
Ga0097621_1020531172	3300006237	Miscanthus Rhizosphere	VNRAAERLAVTTPVFAAFALFGLGSGSALATTTTPASDQYGGGDVLGEATGGSLPFTGINLIVLLGLGLCMVAVGVAVRTVSNSHR*
Ga0074055_114492262	3300006573	Soil	VNRAAERLAVTTPVLAVFALFSLGSGSALATSTTPASKQYGGGDVLGEATGGSLPFTGINLIVLLSLGLCMVAVGVAVRRAARRTVSNSRR*
Ga0074047_118542552	3300006576	Soil	VSCAAHRLAVTAPVLAILALLGSGPGSALAASTNPASDQYGGGADVLGETAGGSLPFTGINLIVLLGVGLCLVAVGFAVRHSAVDHGE*
Ga0074050_120879453	3300006577	Soil	VAAPVLAVLALLGAGSGSALAASTNPASDQYGGGAVLGEATGGSLPFTGINLIVLVGLGLCMVAVGLAVRRLSEGNAPNSYR*
Ga0074059_120683131	3300006578	Soil	VNRAAERLAVTTPVLAAFALFGLGSGSALATSTTPASNQYGGGDVLGEATGGSLPFTGINLIVLLGLGLCMVAVGVAVRRAARRTVSNSRR*
Ga0074054_120220843	3300006579	Soil	VNRAAERLAVTTPVLAVFALFGLGSGSALATSTTPASNQYGGGDVLGEATGGSLPFTGINLIVLLSLGLCMVAVGVAVRRAARRTVSNSRR*
Ga0074049_130562692	3300006580	Soil	VSCAAHRLAVAATVFAVLALLGSDPGSALAASTSPASDQYGGGANVLGETAGGSLPFTGINLIVLLGLGLGMVAVGLAVRRLSGGNAPNSYQ*
Ga0074048_131149842	3300006581	Soil	RLAVAATVFAVLALLGSDPGSALAASTSPASDQYGGGANVLGETAGGSLPFTGINLIVLLGLGLGMVAVGLAVRRLSGGNAPNSYQ*
Ga0074057_100182981	3300006605	Soil	VAAPVLAVLALLGAGSGSALAASTNPASDQYGGGAVLGEATGGSLPFTGINLIVLLGLGLCMIAAGLAVRRASGRNASNSYR*
Ga0074062_127700772	3300006606	Soil	VNRAAERLAVTTPVLAAFALFGLGSGSALATTTTPASNQYGGGDVLGEATGGSLPFTGINLIVLLGLGLCMVAVGVAVRRASRRTVSNSHR*
Ga0075421_1009052923	3300006845	Populus Rhizosphere	VKSIAHRFAVAAPVLTVLALLGPGSGLALAAGATPASDQYGGGINVLGENGGGGSLPFTGINVIVVLGLGLCMVAVGFAVRRVGPNSPQ*
Ga0075424_1000019579	3300006904	Populus Rhizosphere	VKSIAHRFAVAAPVLTVLALLGPGSGLALAAGTTPASDQYGGGINVLGENGGGGSLPFTGINVIVVLGLGLCMVAVGFAVRRVGPNSPQ*
Ga0111539_127562141	3300009094	Populus Rhizosphere	VKSIAHRFAVAAPVLTVLALLGPGSGLALAAGATPASDQYGGGINVLGENGGGGSLPFTGINVIVVLGLGLCM
Ga0105245_100198528	3300009098	Miscanthus Rhizosphere	VNGVAHRCAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSTR*
Ga0105243_100320553	3300009148	Miscanthus Rhizosphere	VNGVAHRIAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVGPNSRQ*
Ga0105241_112687172	3300009174	Corn Rhizosphere	VKSIAHRFAVAAPVLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPSSSQ*
Ga0105248_112601542	3300009177	Switchgrass Rhizosphere	VSGVAHRFAVAAPVLTVLALLGPGSGLALAAGTTPASDQYGGGINVLGENGGGGSLPFTGINVIVVLGLGLCMVAVGFAVRRVGPNSRQ*
Ga0105239_101276263	3300010375	Corn Rhizosphere	VNGVAHRIAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSTR*
Ga0134123_124982662	3300010403	Terrestrial Soil	AASAVNGVAHRCAGAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSTR*
Ga0105246_110350722	3300011119	Miscanthus Rhizosphere	VNGVAHRIAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIALLGLGLCMVAVGLAVRRVAPNSSR*
Ga0137370_103003792	3300012285	Vadose Zone Soil	VRRLAVAAPVLTVLALVGPGSGSALAASTTPASDQYGGGIGVLGENAGGSLPFTGINVVMLLGLGLGIVAV
Ga0157341_10240892	3300012494	Arabidopsis Rhizosphere	VNGVAHRFAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVA
Ga0164303_106716222	3300012957	Soil	VNRAAERLDVTTPVFAAFALFGLGSGSALATTTTPASNQYGGGDVLGEATGGSLPFTGINLIVLLGLGLCMVAVGVAVRTVSNSHR*
Ga0164299_101143593	3300012958	Soil	VNGVAHRFAVAAPMRTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSSR*
Ga0164301_101258072	3300012960	Soil	VNGVAHRFAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSSR*
Ga0164302_102677833	3300012961	Soil	VNGVAHRIAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGSGSLPFTGINVIVLLGLGLCMVAVG
Ga0164309_105600602	3300012984	Soil	VNGVARRFAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSSR*
Ga0164309_114412941	3300012984	Soil	VNRAAERLAVTTPVFAAFALFGLGSGSALATSTTPASNQYGGGDVLGEATGGSLPFTGINLIVLLGLGLCMVAVGVAVRTVSNSHR*
Ga0164304_101274073	3300012986	Soil	VNGVAHRFAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGLAVRRIAPNSSR*
Ga0164306_103049013	3300012988	Soil	VNGVAHRIAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSSR*
Ga0164305_104552032	3300012989	Soil	MLAVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSSR*
Ga0157373_110975992	3300013100	Corn Rhizosphere	ALLGPGSGLALAAGATPASDQYGGGINVLGENGGGGSLPFTGINVIVVLGLGLCMVAVGFAVRRVGPNSRQ*
Ga0157371_105730502	3300013102	Corn Rhizosphere	VAAPMLTVLALLGPGSGLALAASTTPAFDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGLAVRRVAPNSSR*
Ga0157369_123211462	3300013105	Corn Rhizosphere	GSGSALAASTSPASDQYGGGVLGESAGGSLPFTGLNLIVLLGLGLGMVAVGLAVRRICRSAPDSPR*
Ga0157374_102702583	3300013296	Miscanthus Rhizosphere	VNGVAHRCAVAAPMLAVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSTR*
Ga0163162_110552232	3300013306	Switchgrass Rhizosphere	VKSIAHRFAVAAPVLTVLELLGPGSGLALAAGTTPASDQYGGGINVLGENGGGGSLPFTGINVIVVLGLGLCMVAVGFAVRRVAPNPTR*
Ga0157372_103577883	3300013307	Corn Rhizosphere	VNGVAHRIAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGLAVRRIAPNSSR*
Ga0157375_102440331	3300013308	Miscanthus Rhizosphere	VNGVAHRFAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGLAVRRVAPNSSR*
Ga0157375_130422941	3300013308	Miscanthus Rhizosphere	LGSGSALATTTTPASNQYGGGDVLGEATGGSLPFTGINLIVLLGLGLCMVAVGVAVRTVSNSHR*
Ga0182008_108600491	3300014497	Rhizosphere	APAVNRIVRRLVVAAPVFTVAALFGPGSGSALAASSNPASDQYGGGGVLGEAAGGSLPFTGVNLIVLLGLGFAMVAIGLAVRRGSRTSGFNSSG*
Ga0157376_109326121	3300014969	Miscanthus Rhizosphere	SAVNRAAERLAVTTPVFAAFALFGLGSGSALATTTTPASNQYGGGDVLGEATGGSLPFTGINLIVLLGLGLCMVAVGVAVRTVSNSHR*
Ga0132258_1000052838	3300015371	Arabidopsis Rhizosphere	MLAALALLGPGSGSALAASTNPASDQYGGGIDVLGETTGGSLPFTGINVIVLLGLGLGMVAVGFAVRRVAPNSSQ*
Ga0132258_108274661	3300015371	Arabidopsis Rhizosphere	RLAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSSR*
Ga0132258_114370013	3300015371	Arabidopsis Rhizosphere	MAAPVLAVTALLGPGAGFALAASTSPASDQYGGGVNVLGESTGGSLPFTGINVIVVLGIGLCMVAVGFAVRRFAPNPSR*
Ga0184643_13293212	3300019255	Groundwater Sediment	VTRAAYRLAVVAPALGALGLLGPASAGAASTNPASDQYGGGGGVLGVNAGGSLPFTGANLIVLLGLGLGMVAVGVGLRRIAGRNAPVS
Ga0206353_111946382	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MNGVAHRFAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPSSSQ
Ga0222622_110395901	3300022756	Groundwater Sediment	VTAPALAAFALLGIGSGSALAASTSPASNQYGGGVDVLGESAGGSLPFTGVNLIVLLGLGLCMITIGGAVRRVSR
Ga0207656_100244392	3300025321	Corn Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPSSSQ
Ga0207642_101384042	3300025899	Miscanthus Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSTR
Ga0207642_101513394	3300025899	Miscanthus Rhizosphere	VNRAAERLAVTTPVFAAFALFGLGSGSALATTTTPASNQYGGGDVLGEATGGSLPFTGINLIVLLGLGLCMVAVGVAVRTVSNSHR
Ga0207707_104276453	3300025912	Corn Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGLA
Ga0207662_100332834	3300025918	Switchgrass Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVVLGLGLCMVAVGFAVRRVGPNSRQ
Ga0207694_109671062	3300025924	Corn Rhizosphere	GLALAASTTPAFDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSTR
Ga0207650_115572882	3300025925	Switchgrass Rhizosphere	VKSIAHRFAVAAPVLTVLALLGPGSGLALAAGTTPASDQYGGGINVLGENGGGGSLPFTGINVIVVLGLGLCMVAVGFAVRRVGPNSR
Ga0207687_101724191	3300025927	Miscanthus Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGLAV
Ga0207690_118518232	3300025932	Corn Rhizosphere	MSFLGLGSGSAFAASTSPASDQYGGGVLGESAGGSLPFTGLNLIVLLGLGLGMVAVGLAVRRICRSAPDSPR
Ga0207686_101368684	3300025934	Miscanthus Rhizosphere	VTTPVFAAFALFGLGSGSALATTTTPASNQYGGGDVLGEATGGSLPFTGINLIVLLGLGLCMVAVGVAVRTVSNSHR
Ga0207709_102773182	3300025935	Miscanthus Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVGPNSRQ
Ga0207679_100271416	3300025945	Corn Rhizosphere	MNGVAHRFAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGLAVRRVAPNSSR
Ga0207677_101708381	3300026023	Miscanthus Rhizosphere	HRCAVAAPMLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSTR
Ga0207678_108471852	3300026067	Corn Rhizosphere	GPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSTR
Ga0207676_105307862	3300026095	Switchgrass Rhizosphere	VKSIAHRFAVAAPVLTVLALLGPGSGLALAAGTTPASDQYGGGINVLGENGGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPNSSR
Ga0268265_115268121	3300028380	Switchgrass Rhizosphere	MLTVLALLGPGSGLALAASTTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGLAVRRVAPNSSR
Ga0268264_114817553	3300028381	Switchgrass Rhizosphere	MLTVLALLGPGSGLALAASRTPASDQYGGGINVLGENSGGGSLPFTGINVIVLLGLGLCMVAVGFAVRRVAPSSSQ
Ga0307280_102882992	3300028768	Soil	VNRAPHRLAVAVPVLTVLALFGSGSGSALAASTNPASDQYGGGAGVLGETAGGSLPFTGINLIALLGLGLCMVAVGLAVRRLTGGTAPNSYR
Ga0307290_101105932	3300028791	Soil	VNRAPHRLAVAVPVLTVLALFGSGSGSALAASINPASDQYGGGAGVLGETAGGSLPFTGINLIALLGLGLCMVAVGLAVRRLTGGTA
Ga0307299_101831651	3300028793	Soil	GSGSALAASTNPASDQYGGGAGVLGETAGGSLPFTGINLIALLGLGLCMVAVGLAVRRLTGGTAPNSYR
Ga0307287_103708792	3300028796	Soil	GSALAASINPASDQYGGGAGVLGETAGGSLPFTGINLIALLGLGLCMVAVGLAVRRLTGGTAPNSYR
Ga0307292_100510592	3300028811	Soil	AASAVNRAPHRLAVAVPVLTVLALFGSGSGSALAASTNPASDQYGGGAGVLGETAGGSLPFTGINLIALLGLGLCMVAVGLAVRRLTGGTAPNSYR
Ga0307310_100960811	3300028824	Soil	PHRLAVAVPVLTVLALFGSGSGSALAASTNPASDQYGGGAGVLGETAGGSLPFTGINLIALLGLGLCMVAVGLAVRRLTGGTAPNSYR
Ga0307312_100805113	3300028828	Soil	TRAAYRLAVAAPALGALGLLGPASAGAASTNPASDQYGGGGGVLGVNAGGTLPFTGANLIVLLGLGLGMVAVGVGLRRIAGRNAPVS
Ga0307312_101190841	3300028828	Soil	PTAASAVNRAPHRLAVAVPVLTVLALFGSGSGSALAASTNPASDQYGGGAGVLGETAGGSLPFTGINLIALLGLGLCMVAVGLAVRRLTGGTAPNSYR
Ga0307304_104902711	3300028885	Soil	VNRAPHRLAVAVPVLTVLALFGSGSGSALAASTNPASDQYGGGAGVLGETAGGSLPFTGINLIALLGLGLCMVAVGLAVRRLTGGTAPSSHR
Ga0308204_103339811	3300031092	Soil	LNRTAKRLAVTAPALAAFALLGIGSGSALAASTSPASNQYGGGVDVLGESAGGSLPFTGVNLIVLLGLGLCMITIGVTVRRVSRRSAP
Ga0308175_1001391573	3300031938	Soil	VKCAPHRFALAAPVFTLMSFLGLGSGSAFAASTSPASDQYGGGVLGESAGGSLPFTGLNLIVLLGLGLGMVAVGLAVRRISRRSAPDSPR
Ga0326726_100339456	3300033433	Peat Soil	VNRAAYRLAVAAPVLAVLTLLGGGSGSALAASTNPASDQYGGGADVLGETVGGSLPFTGINLIVLLGLGLCMVAVGFTV
Ga0326726_106966342	3300033433	Peat Soil	VNRAANRLTVAAPVLAVLALLGAGSGSALAASTNPASDQYGGGADVLGETAGGSLPFTGINLIVLLGLGLCMIAAGLAVRRVSGRNASNSYR
Ga0326723_0153668_379_657	3300034090	Peat Soil	VNRAAYRLAVAAPVLAVLTLLGGGSGSALAASTNPASDQYGGGADVLGETVGGSLPFTGINLIVLLGLGLCMVAVGFTVRRLSGGNAPNSPR
Ga0370545_176072_75_350	3300034643	Soil	VNRAAERLAVTTPVLAAFALFGLGSGSALATSTTPASNQYGGGDVLGEATGGSLPFTGINLIVLLGLGLCMVAVGVAVRRASRRTVSNSHR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087563

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences