Metagenome / Metatranscriptome Family F087560

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F087560
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	62 residues
Representative Sequence	MYQLPELAKAICDDKRRAAEHRRLCAQAYAARRNGTRRGIARLTGLRLRLSPAALRRAAQAF
Number of Associated Samples	98
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.91 %
% of genes near scaffold ends (potentially truncated)	11.82 %
% of genes from short scaffolds (< 2000 bps)	86.36 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (76.364 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (27.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.909 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.56% β-sheet: 0.00% Coil/Unstructured: 34.44%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF03795	YCII	42.73
PF08281	Sigma70_r4_2	24.55
PF04542	Sigma70_r2	12.73
PF02571	CbiJ	0.91
PF12697	Abhydrolase_6	0.91
PF13561	adh_short_C2	0.91
PF04545	Sigma70_r4	0.91
PF13700	DUF4158	0.91
PF10387	DUF2442	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	42.73
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	12.73
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	12.73
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	12.73
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	12.73
COG2099	Precorrin-6x reductase	Coenzyme transport and metabolism [H]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.36 %
Unclassified	root	N/A	23.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.36 %
Unclassified	root	N/A	23.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.36 %
Unclassified	root	N/A	23.64 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.00 %
Unclassified	root	N/A	23.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.82 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	60.00 %
Unclassified	root	N/A	23.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.27 %
Unclassified	root	N/A	23.64 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	11.82 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.64 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	15.45 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	11.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.45 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.82 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.64 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	15.45 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	11.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.45 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.82 %
Pseudoxanthomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.64 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	11.82 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	6.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.45 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	2.73 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.82 %
Pseudoxanthomonas taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas → Pseudoxanthomonas taiwanensis	0.91 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.64 %
unclassified Conexibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter	11.82 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	6.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.45 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	2.73 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.82 %
Pseudonocardia thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	0.91 %
Pseudoxanthomonas taiwanensis J19	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas → Pseudoxanthomonas taiwanensis → Pseudoxanthomonas taiwanensis J19	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.64 %
Conexibacter sp. DBS9H8	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	11.82 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	6.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	5.45 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	2.73 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.82 %
Pseudonocardia thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	0.91 %
Pseudoxanthomonas taiwanensis J19	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas → Pseudoxanthomonas taiwanensis → Pseudoxanthomonas taiwanensis J19	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001452\|JGI20203J14952_1017051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	797	Open in IMG/M
3300001471\|JGI12712J15308_10125238	Not Available	657	Open in IMG/M
3300001593\|JGI12635J15846_10204946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Pseudoxanthomonas → Pseudoxanthomonas taiwanensis → Pseudoxanthomonas taiwanensis J19	1300	Open in IMG/M
3300003505\|JGIcombinedJ51221_10057457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1492	Open in IMG/M
3300003505\|JGIcombinedJ51221_10122051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1045	Open in IMG/M
3300003505\|JGIcombinedJ51221_10240042	Not Available	736	Open in IMG/M
3300004635\|Ga0062388_101428933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300005329\|Ga0070683_102195471	Not Available	530	Open in IMG/M
3300005344\|Ga0070661_101232634	Not Available	626	Open in IMG/M
3300005435\|Ga0070714_101823565	Not Available	594	Open in IMG/M
3300005435\|Ga0070714_102044163	Not Available	559	Open in IMG/M
3300005439\|Ga0070711_100923692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	746	Open in IMG/M
3300005537\|Ga0070730_10365229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	938	Open in IMG/M
3300005541\|Ga0070733_10120085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1689	Open in IMG/M
3300005564\|Ga0070664_100347648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1348	Open in IMG/M
3300005602\|Ga0070762_10168110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1323	Open in IMG/M
3300005602\|Ga0070762_10811516	Not Available	634	Open in IMG/M
3300005614\|Ga0068856_100379616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1432	Open in IMG/M
3300005950\|Ga0066787_10015119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	1279	Open in IMG/M
3300006028\|Ga0070717_11242466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	678	Open in IMG/M
3300006028\|Ga0070717_11782643	Not Available	556	Open in IMG/M
3300006175\|Ga0070712_100568996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	956	Open in IMG/M
3300006175\|Ga0070712_101116778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	684	Open in IMG/M
3300006176\|Ga0070765_101377949	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300006755\|Ga0079222_10698833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300006804\|Ga0079221_10028176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2354	Open in IMG/M
3300006871\|Ga0075434_100116744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2682	Open in IMG/M
3300006904\|Ga0075424_100492366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1309	Open in IMG/M
3300009665\|Ga0116135_1355539	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300010396\|Ga0134126_10606282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	1252	Open in IMG/M
3300010867\|Ga0126347_1339938	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300010869\|Ga0126359_1627051	Not Available	637	Open in IMG/M
3300010880\|Ga0126350_10185421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1483	Open in IMG/M
3300010880\|Ga0126350_11131166	Not Available	536	Open in IMG/M
3300017946\|Ga0187879_10311979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	873	Open in IMG/M
3300018034\|Ga0187863_10069070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1997	Open in IMG/M
3300018037\|Ga0187883_10399741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300018042\|Ga0187871_10039567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	2895	Open in IMG/M
3300018043\|Ga0187887_10160452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	1344	Open in IMG/M
3300018044\|Ga0187890_10371369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	802	Open in IMG/M
3300018468\|Ga0066662_12565475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300020581\|Ga0210399_10958711	Not Available	691	Open in IMG/M
3300020582\|Ga0210395_10150703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1736	Open in IMG/M
3300021178\|Ga0210408_10187599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	1643	Open in IMG/M
3300021180\|Ga0210396_10024795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5552	Open in IMG/M
3300021401\|Ga0210393_11049740	Not Available	659	Open in IMG/M
3300021402\|Ga0210385_10283888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1224	Open in IMG/M
3300021403\|Ga0210397_11144573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	605	Open in IMG/M
3300021407\|Ga0210383_11784451	Not Available	502	Open in IMG/M
3300021420\|Ga0210394_10909869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	765	Open in IMG/M
3300021433\|Ga0210391_10263407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1353	Open in IMG/M
3300022840\|Ga0224549_1006923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1713	Open in IMG/M
3300025574\|Ga0208717_1009592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2868	Open in IMG/M
3300025915\|Ga0207693_10158524	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300025915\|Ga0207693_11278876	Not Available	550	Open in IMG/M
3300025928\|Ga0207700_10051613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3070	Open in IMG/M
3300025929\|Ga0207664_11452120	Not Available	607	Open in IMG/M
3300025944\|Ga0207661_10587668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1022	Open in IMG/M
3300027067\|Ga0208602_1007679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	1187	Open in IMG/M
3300027089\|Ga0207943_102930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1207	Open in IMG/M
3300027110\|Ga0208488_1058948	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300027117\|Ga0209732_1009889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1588	Open in IMG/M
3300027307\|Ga0209327_1057115	Not Available	569	Open in IMG/M
3300027370\|Ga0209010_1031120	Not Available	915	Open in IMG/M
3300027559\|Ga0209222_1058755	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300027590\|Ga0209116_1116332	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300027609\|Ga0209221_1013702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	2114	Open in IMG/M
3300027619\|Ga0209330_1149504	Not Available	526	Open in IMG/M
3300027692\|Ga0209530_1018686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2101	Open in IMG/M
3300027725\|Ga0209178_1011600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2758	Open in IMG/M
3300027765\|Ga0209073_10046255	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300027775\|Ga0209177_10165629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	762	Open in IMG/M
3300027817\|Ga0209112_10135630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	818	Open in IMG/M
3300027817\|Ga0209112_10180983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	718	Open in IMG/M
3300027829\|Ga0209773_10170336	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300027855\|Ga0209693_10019005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3297	Open in IMG/M
3300027857\|Ga0209166_10116436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1480	Open in IMG/M
3300027895\|Ga0209624_10987625	Not Available	546	Open in IMG/M
3300027908\|Ga0209006_10510822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1001	Open in IMG/M
3300027908\|Ga0209006_10619525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	892	Open in IMG/M
3300027908\|Ga0209006_11203624	Not Available	592	Open in IMG/M
3300028556\|Ga0265337_1002407	All Organisms → cellular organisms → Bacteria	8608	Open in IMG/M
3300028653\|Ga0265323_10078893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	1114	Open in IMG/M
3300028742\|Ga0302220_10124649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	995	Open in IMG/M
3300028742\|Ga0302220_10288187	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300028780\|Ga0302225_10147314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	1141	Open in IMG/M
3300028789\|Ga0302232_10062709	All Organisms → cellular organisms → Bacteria	1946	Open in IMG/M
3300028801\|Ga0302226_10200684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	854	Open in IMG/M
3300028877\|Ga0302235_10464994	Not Available	538	Open in IMG/M
3300028879\|Ga0302229_10481588	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300028906\|Ga0308309_11765920	Not Available	524	Open in IMG/M
3300030043\|Ga0302306_10312881	Not Available	602	Open in IMG/M
3300030046\|Ga0302305_1294306	Not Available	561	Open in IMG/M
3300030056\|Ga0302181_10427483	Not Available	567	Open in IMG/M
3300030617\|Ga0311356_10397931	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300030618\|Ga0311354_10223701	All Organisms → cellular organisms → Bacteria	1995	Open in IMG/M
3300030677\|Ga0302317_10086263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1517	Open in IMG/M
3300030739\|Ga0302311_10525774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	808	Open in IMG/M
3300031027\|Ga0302308_10093849	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300031233\|Ga0302307_10187588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1069	Open in IMG/M
3300031238\|Ga0265332_10042929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1953	Open in IMG/M
3300031240\|Ga0265320_10350052	Not Available	652	Open in IMG/M
3300031525\|Ga0302326_10407237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	2106	Open in IMG/M
3300031708\|Ga0310686_102047629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2829	Open in IMG/M
3300031716\|Ga0310813_10400350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1181	Open in IMG/M
3300031718\|Ga0307474_10365108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. DBS9H8	1120	Open in IMG/M
3300031823\|Ga0307478_10367496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1187	Open in IMG/M
3300032829\|Ga0335070_10204324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1965	Open in IMG/M
3300034124\|Ga0370483_0069841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1129	Open in IMG/M
3300034199\|Ga0370514_009168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	2279	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.82%
Host-Associated	Host-Associated	8.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.64%
Aquatic	Environmental → Aquatic	8.18%
Plants	Host-Associated → Plants	8.18%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.27%
Peat	Environmental → Terrestrial → Peat	16.36%
Freshwater	Environmental → Aquatic → Freshwater	8.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.91%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	36.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	16.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.18%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	24.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	16.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.09%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.73%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	20.00%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	15.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.27%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.55%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.64%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.64%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.82%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.91%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001452	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300025574	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300027067	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF007 (SPAdes)	Environmental	Open in IMG/M
3300027089	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF015 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027307	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027370	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028653	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG	Host-Associated	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030046	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_3	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20203J14952_10170512	3300001452	Arctic Peat Soil	MYQRPELAKAICDDKRRAAEHHRLSAQAYPARRNGARRGIARLTGLRLRLSPAALRRAAQTV*
JGI12712J15308_101252382	3300001471	Forest Soil	MYQRLELAKAICDDKRRAAEHHRLSAPAYAARRNGTRRGIARLTALRLRLSPAALRRAAQAF*
JGI12635J15846_102049461	3300001593	Forest Soil	MYQLPELAKAICDDERRAAEHHRLSAPAYAARRNGTRRGIARLTGLRLRLSPAALRRAAQAI*
JGIcombinedJ51221_100574572	3300003505	Forest Soil	MYQLPDLAKAICDDKRRAADHRRLSAQAYAARRDGTPRGIARLAGLRLRLAPAAVRRAARVF*
JGIcombinedJ51221_101220512	3300003505	Forest Soil	MNQLHELAKVIDDDQRRTAEHRRRSAQAYAARRNGTRRGIARLTGLRVRLSPAALRRAAQAV*
JGIcombinedJ51221_102400422	3300003505	Forest Soil	MYQLSELAKAICDDERRAAEHRRTSAQAYAARRNGTRRGIARLTGLRLLLSPAALRRAAQAF*
Ga0062388_1014289332	3300004635	Bog Forest Soil	MYQLPDLAKAIYDDKRRAAEHHRLCGHAYAARRNGTRRGIARLAGLPFRLAPAAVRRAGQVF*
Ga0070683_1021954712	3300005329	Corn Rhizosphere	VMYQLPELARTIRDDKRRAAEHHRPCAQAHAARRNGTWRGIVRLTGLRVRLSPAALRRTAQAS*
Ga0070661_1012326342	3300005344	Corn Rhizosphere	MYQLPELARTIRDDKRRAAEHHRPCAQAHAARRNGTWRGIVRLTGLRVRLSPAALRRTAQAS*
Ga0070714_1018235651	3300005435	Agricultural Soil	MYQLPELAKAICDDNLRAAEHHQLSAQAYAARRNGARRGIARLAGLRLRMALASLRRAAQAV*
Ga0070714_1020441632	3300005435	Agricultural Soil	MYQLPQLAKAICDDKLRTAEHHQLCNRAYAARDESARRGSARLAGLRLRLTPESLRRAAQAF*
Ga0070711_1009236921	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MYQLPQLAKAICDDKLRTAEHHQLCNQAYAARDESARRGCARLAGLRLRLTPESLRRAS
Ga0070730_103652292	3300005537	Surface Soil	MYHLPEVAKAICDDERRAAEHHRRSAQAYAAGRNGTRRGIARLTGLRVRLSPAALRRSAQAV*
Ga0070733_101200852	3300005541	Surface Soil	MYQLPELAKAICDDKLRAAEHHQLCAQAYAARGDGARRGIARLAGLRLRLTPASLRRAAQAF*
Ga0070664_1003476482	3300005564	Corn Rhizosphere	MYQLPELARTIRDDKRRAAEHHRPCAQAHAARRNGTWRGIVRLTGLRVRLSPAALRRTARAS*
Ga0070762_101681102	3300005602	Soil	MYQLPELAKAICDDERRAAEQRRLSAPAYAARRNGTRRGIARLTGLRLRLSPAALRRAAQAL*
Ga0070762_108115161	3300005602	Soil	MYQLPQLAKAICDDKRRAAEHHRLCGRAYAARRNGTRRGIARLAGLPFRLAPAAVRRAAQVF*
Ga0068856_1003796162	3300005614	Corn Rhizosphere	MYQLPELARTIRDDKRRAAEHRRPCAQAYAARRNGTWRGIVRLTGLRVRLSPAALRRTAQAS*
Ga0066787_100151192	3300005950	Soil	MYQLPELAKAICDDKRRAAEHRRPCAQAYAARRNGTRRGIVRLTDLRLRLFPAALRRAARAF*
Ga0070717_112424662	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MYQLPELAKATCDDKLRAAEHHQLCNQAYAARDDGARRGSARLASLRLRLIPDSLRRASQVF*
Ga0070717_117826432	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MYQLPELAKAIRDEQLRAAEHHQLCAQPYAARRNGARRGIARVAGLRMRLAPASLRRAARAL*
Ga0070712_1005689962	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MYQLPQLAKAICDDKLRTAEHHQLCNQAYAARDESARRGSAWLAGLRLRLTPESLRRASQAF*
Ga0070712_1011167782	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MHQLPQLAKAIGDDELRAAEQHRLCAQAYAARRNGARRGVARLTGLRLRLALASLRRATQAF*
Ga0070765_1013779492	3300006176	Soil	MYQLPELAKAICDDKLRAAEHHQLCAHAYAARRNGARRGIARLAGLRLRLAPASLRRAAQAL*
Ga0079222_106988332	3300006755	Agricultural Soil	MYQLPELARTIRDDKRRAAEHCRPCAQAHAARRNGTWRGIVRLTGLRVRLSPAALRRTAQAS*
Ga0079221_100281764	3300006804	Agricultural Soil	MYQLPDLARTIRDDKRRAAEHHQPCAQAHAARRNGTGRGIVRLTGLRVRLSPAALRRTAQAS*
Ga0075434_1001167442	3300006871	Populus Rhizosphere	MYQLPELARTIRDDKRRGVEHRRLCAQAYAARRNGAWRGIVSLTGLRVRLFPAALRRTAQAS*
Ga0075424_1004923662	3300006904	Populus Rhizosphere	MYQLPELARTIRDDKRRAAEHHRLCAQAHAARRNGTWRGIVRLTGLRVRLSPAALRRTAQAS*
Ga0116135_13555391	3300009665	Peatland	MYQLPELAKAICDDKRRAAEHHRLCGQAYAARRNGTRRGIARLAGLRLRLAPAAVRRAAQVF*
Ga0134126_106062822	3300010396	Terrestrial Soil	MYQLPELTKAICDDKRRAAEHHRLCAQAYAARRKGTRRGIVRLTGLRLRLFPATLRRAAQAF*
Ga0126347_13399382	3300010867	Boreal Forest Soil	MHQLPELAKASCDDKRRAAERHRLCAQAYAARRNGTRRGIVRLTGLRLRLSPAALRRAARAF*
Ga0126359_16270512	3300010869	Boreal Forest Soil	MHQLPELAKASCDDKRRAAERHRLCAQAYAARRNGTRRGIVRLTGLRLRLSPAALRRAAQGF*
Ga0126350_101854212	3300010880	Boreal Forest Soil	MYQLPELAKAICDDERRAAEHRRLSAQAYAARRNGTRRGIVRLTGLRLRVSAAALRRAA*
Ga0126350_111311661	3300010880	Boreal Forest Soil	PPRRRETVMYQLPELAKAIYDDKRRAAEHHWLCAQPYAARRNGTRRGIIRLTGLRRGLLPAALRRAAQAF*
Ga0187879_103119792	3300017946	Peatland	MYQLPELAKAICDDKRRAAEHHRLCGQAYAARRNGTRRGIARLAGLRLRLAPAAVRRAAQVF
Ga0187863_100690702	3300018034	Peatland	MYQLPELAKAICDDKRRAAEHHRLCAQAYAARRNGTRRGIVRLTGLRLRLSPALRRAAQA
Ga0187883_103997412	3300018037	Peatland	MYQLPELAKAICDDKRRAAEHRRLCAQAYAARRNGTRRGIARLAGLPFRLAPAAVRRAAQVF
Ga0187871_100395673	3300018042	Peatland	MYQLPELAKAICDDKRRAAEHHRLCAQAYAARRNGTRRGIVRLTGLRLRLSPALRRAAQT
Ga0187887_101604522	3300018043	Peatland	MYQLPELAKAICDDKRRAAEHRRLCAQAYAARRNGTRRGIARLTGLRVRLSPAALRRAAQAF
Ga0187890_103713691	3300018044	Peatland	MYQLPELAKAICDDKRRAAEHRRLCAQAYAARRNGTRRGIARLAGLRLRLAPAAVRRAAQVF
Ga0066662_125654752	3300018468	Grasslands Soil	MYQLPGLAKASCDDKLRAAEHHQLCAQAYAARRDGARRGIARLTGLRLRLVSASLRRAATVGRW
Ga0210399_109587112	3300020581	Soil	MYQLPELARTIRDDKRRAAEHHRLCAQAYAARRNGTWRGIVRLTGLRVRLSPAALRRAAQAS
Ga0210395_101507032	3300020582	Soil	MYQLPELARTIRDDKRRAADHHRLCAQASAARRTGTWRGIVRLPGLRVRLSPAALRRAAQAS
Ga0210408_101875992	3300021178	Soil	MYQLPELARTIRDDKRRAADHHRLCAQASAARRTGTWRGIVPLPGLRARLSPAALRRAAQAS
Ga0210396_100247957	3300021180	Soil	MYQLPELAKAICDDERRAAEHRRLSAPAYAARRNGTRRGIARLTGLRLRLSPAALRRAAQLF
Ga0210393_110497402	3300021401	Soil	MHQLPELANAICDDKRQAAEHHRLSAQAYAARRNGTRRGIAGLTGLRLRLSLAALRRAAQAS
Ga0210385_102838882	3300021402	Soil	MNQLHELAKAIDDDQRRTAEHRRRSAQAYAARRNGTRRGIARLTGLRVRLSPAALRRAAQAV
Ga0210397_111445732	3300021403	Soil	MYQLPELAKAIGDDNRRAAEHRRLCAQAYAARRNGTRRGIVRLMGLRFRLFPVARRGAAQAF
Ga0210383_117844511	3300021407	Soil	MYQLPELAKAICDDKLRAAEHHQLCAQAYAARRIGARRGIARLAGLRLRLAPASRRRAAQAF
Ga0210394_109098692	3300021420	Soil	MYQMPELAKAICDDKLRAAEHHQLCAQAYAARRIGARRGIARLAGLRLRLAPASRR
Ga0210391_102634072	3300021433	Soil	MYQLPDLAKAICDDKRRAADHRRLSAQAYAARRDGTPRGIARLAGLRLRLAPAAVRRAARVF
Ga0224549_10069232	3300022840	Soil	MNQLPELAKAICDDKRRAAEHRRPCAQAYDARRNGTRRGMVRLTGLRLRLFPAALRRAAQGF
Ga0208717_10095925	3300025574	Arctic Peat Soil	MYQRPELAKAICDDKRRAEEHHRLSAQAYPARRNGARRGIARLTGLRLRLSPAALRRAAQTV
Ga0207693_101585243	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MYQLPQLAKAICDDKLRTAEHHQLCNQAYAARDESARRGSAWLAGLRLRLTPESLRRASQAF
Ga0207693_112788761	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MHQLPQLAKAIGDGELRAAEQHRLCAQAYAARRNGARRGVARLTGLRLRLALASLRRATQAF
Ga0207700_100516133	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MYQLPELAKATCDDKLRAAEHHQLCNQAYAARDDGARRGSARLASLRLRLIPDSLRRASQVF
Ga0207664_114521202	3300025929	Agricultural Soil	MYQLPQLAKAICDDKLRTAEHHQLCNQAYAARDESARRGSARLAGLRLRLTPESLRRASQAF
Ga0207661_105876683	3300025944	Corn Rhizosphere	MYQLPELARTIRDDKRRAAEHHRPCAQAYAARRNGTWRGIVRLTGLRVRLSPAALRRTAQAS
Ga0208602_10076791	3300027067	Forest Soil	MYQLPELAKAICDDERRAAEHRRLSAPAYAARRNGSRRGIARLTGLRPRLSLAALRRAAQAH
Ga0207943_1029302	3300027089	Forest Soil	MYQLSELAKAICDDERRAAEHRRTSAQAYAARRNGTRRGIARLTGLRLLLSPAALRRAAQAF
Ga0208488_10589482	3300027110	Forest Soil	MYQLSELAKAICDDERRAAEHRRTSAQAYAARRNGTRRGIARLTGLRLLLSPAALRRAAQAL
Ga0209732_10098892	3300027117	Forest Soil	MYQLPELARAICDDERRAADQRRLSAPAYAARRNGTRRGIARLTGLRLRLSPAALRRAARAF
Ga0209327_10571151	3300027307	Forest Soil	MYQLQGLAQAVCADKRRDAERRQLCARAYAARRNGTRPGTARLTGLRLRLLPATLRRAAQAF
Ga0209010_10311202	3300027370	Forest Soil	MYQLPELAKAICDDERRAAEHHRLSAPAYAARRNGTRRGIARLTGLRLRLSPAALRRAARAF
Ga0209222_10587551	3300027559	Forest Soil	MYQLPELAKAICDDERRAAEHHRLSAPAYAARRNGARRGIARLTGLRLRLSPAALRRAAQAF
Ga0209116_11163322	3300027590	Forest Soil	MYQLPELAKAICDDERRAAEHHRLSAPAYAARRNGTRRGIARLTGLRLRLSPAALRRAAQAL
Ga0209221_10137022	3300027609	Forest Soil	MYQLPELAKAICDDERRAAEHHRLSAPAYAARRNGTRRGIARLTGLRLRLSPAALRRAAQAI
Ga0209330_11495041	3300027619	Forest Soil	KASCDDKRRAAEHRRQCAQAYAARRNGTRRGIARLSGLRLRLSPAALRRAAQAL
Ga0209530_10186862	3300027692	Forest Soil	MYQLPELAKAICDDERRAAEHHRLSAPAYAARRNGTRRGIARLTGLRLRLSPAALRRADQAF
Ga0209178_10116002	3300027725	Agricultural Soil	MYQLPDLARTIRDDKRRAAEHHQPCAQAHAARRNGTGRGIVRLTGLRVRLSPAALRRTAQAS
Ga0209073_100462551	3300027765	Agricultural Soil	EAVRDRPPRRRETVMYQLPELARTIRDDKRRAAEHRRPCAQAHAARRNGTWRGIVRLTGLRVRLSPAALRRTAQAS
Ga0209177_101656291	3300027775	Agricultural Soil	PELARTIRDDKRRAAEHHQPCAQAHAARRNGTWRGIVRLTGLRVRLSPAALRRTAQAS
Ga0209112_101356302	3300027817	Forest Soil	MYQLPELAKAVCADKLRAAEHRRLRAQAYAARRNGARRGLARLAGLRFRLVPASPRRAASAF
Ga0209112_101809831	3300027817	Forest Soil	RRETIMYQLQGLAQAVCADKRRDAERRQLCARAYAARRNGTRPGTARLTGLRLRLLPATLRRAAQAF
Ga0209773_101703362	3300027829	Bog Forest Soil	MYQLTELAKAICDDERRAAEHRRLSAQAYAAGRNGTRRGIARLTGLRLRLSPAALRRAAQAF
Ga0209693_100190051	3300027855	Soil	MYQLPELAKAICDDERRAAEQRRLSAPAYAARRNGNRRGIARLTGLRLRLSPAALRRAARAF
Ga0209166_101164362	3300027857	Surface Soil	MYHLPEEAKAICDDERRAAEHHRRSAQAYAAGRNGTRRGIARLTGLRVRLSPALRRAAQA
Ga0209624_109876252	3300027895	Forest Soil	MYQRLELAKAICDDKRRAAERNRLSAQAYAARRNGTRRGIARLTALRLRLSPAALRRAAQAF
Ga0209006_105108222	3300027908	Forest Soil	MYRHLLPELAKAICDDERRAAERRRLSAQAYAASRYGTRRGIARLTGLRLRLSPAALRRAAQAL
Ga0209006_106195252	3300027908	Forest Soil	MYQRLELAKAICDDKRRAAEHHRLSAPAYAARRNGTRRGIARLTALRLRLSPAALRRAAQAF
Ga0209006_112036242	3300027908	Forest Soil	MYQLSELANAICDDKHRAAEHHQRSAQAYAAGRNGTRRGIARLTGLRVRLSPAALRRAAQAF
Ga0265337_10024079	3300028556	Rhizosphere	MYQLPQLAKATCDDKLRAAEHHQLCAQAYAARRNGARRGIARLAGLRLRLAPASLRRATQAF
Ga0265323_100788933	3300028653	Rhizosphere	CDDKLCAAEHHQLCAQAYAARRNGARRGIARLAGLRLRLAPASLRRATQAF
Ga0302220_101246492	3300028742	Palsa	MYQLPELAKAICDDKRRAAEHRRLCAQAYAARRNGTRRGIVRLTGLRLRLSPAPRRAARA
Ga0302220_102881872	3300028742	Palsa	MYQLPELANAICDDKRQAAEHHRLSAPAYAARRNGTRRGIARLTGLRLRLSPAAARRAAQAF
Ga0302225_101473141	3300028780	Palsa	RRETVMYQLPELANAICDDKRQAAEHHRLSAPAYAARRNGTRRGIVRLTGLRLRLSPALRRAARAF
Ga0302232_100627092	3300028789	Palsa	MYQLSELAKASCDDKRRAAEHHRLSAQAYAARRNGTRRGIARLTGLRLRLSPAALRRAAQAF
Ga0302226_102006841	3300028801	Palsa	MYQLSELAKASCDDKRRAAEHHRLSAQAYAARRNGTRRGIARLTGLRPRLSPAALRRAAQAF
Ga0302235_104649941	3300028877	Palsa	MYQQPELAKAICDDKRRAAEHRRLCARAYAARRNGTRRGIVRLTGLRLRLSPAALRPQAF
Ga0302229_104815881	3300028879	Palsa	MNQLPELAKAICDDKRRAAEHRRPCAQAYDARRNGTRRGMVRLTGLRLRLFPAALRRATQGF
Ga0308309_117659202	3300028906	Soil	MYQLPELAKAIDDDERRAAERRRLCAQAYAARRNGTRRGIVRLTGLRLRLVPAALRRAAQAS
Ga0302306_103128812	3300030043	Palsa	MYQLPELAKAICDDKRRAAEHRRLCAQAYAARRNGTRRGIARLTGLRLRLSPAALRRAAQAF
Ga0302305_12943062	3300030046	Palsa	PELAKAICDDKRRAAEHRRLCAQAYAARRNGTRRGIVRLTGLRLRLSPALRRAARAF
Ga0302181_104274832	3300030056	Palsa	MYQLRELAKAICDDKRRAAEHHRLCAQAYAARRNGTRRGIVRLRGLRLRLSPALRRAGQA
Ga0311356_103979312	3300030617	Palsa	MYQLPELARAICDDKSRAAEHHRLCAQAYAARRNSTRRGMVRLTGLRLRLSPSARRRAAQAF
Ga0311354_102237013	3300030618	Palsa	MYQLSELAKASCDDKRQAAEHHRLSAPAYAARRNGTRRGIARLTGLRLRLSPAALRRAAQAF
Ga0302317_100862631	3300030677	Palsa	MYQLSELAKASCDDKRRAAEHHRLSAQAYAARRNGTRRGIARLSGLRLRLSPAALRRAAQAF
Ga0302311_105257742	3300030739	Palsa	MYQLPELAKAICDDKRRAAEHRRLCAQAYAARRNGTRRGIVRLTGLRLRLSPALRRAAQA
Ga0302308_100938492	3300031027	Palsa	MYQLPELANAICDDKRQAAEHHRLSAPAYAARRNGTRRGIARLTGLRLRLSPAALRRAAQAF
Ga0302307_101875882	3300031233	Palsa	MNQLPELAKAICDDKRRAAEHHRLCAQAYAARRNGTRRGIVRLTGLRLRLSPAPRRAARA
Ga0265332_100429292	3300031238	Rhizosphere	MYQLPQLAKATCDDKLRAAEHHQLCAQAYAARRNGARRGIARLAGLRLRLAPASLRRAAQAF
Ga0265320_103500522	3300031240	Rhizosphere	ETVMYQLPQLAKATCDDKLRAAEHHQLCAQAYAARRNGARRGIARLAGLRLRLAPASLRRATQAF
Ga0302326_104072371	3300031525	Palsa	MYQLPELAKAICDDERRAAEHRRLSAPAYAARRNGTRRGIARLGGLRLRLSPAALRRATQAF
Ga0310686_1020476294	3300031708	Soil	MYQLPELARAICDDERRAAEQRRLSAPAYAARRNGTRRGIARLTGLRLRLSPAARRRAAQAF
Ga0310813_104003502	3300031716	Soil	MYQLPELARTIRDDKRRAAEHHRLCAQAYAARRNGTWRGIARLTGLRVRLSPALRRTAQA
Ga0307474_103651081	3300031718	Hardwood Forest Soil	MYQLPELAKAICDDERRAAEHRRLSAQAYAARRNGTRRGIVRLAGLRLRLSPAALRRAAQAF
Ga0307478_103674962	3300031823	Hardwood Forest Soil	MHQLPELAKAICDDERRAAEHHRLSAQAYAARRNGTRRGIARLVGLRLRLSPAALRRSAQAY
Ga0335070_102043242	3300032829	Soil	MYQLPELARTISDDKRRAAEHHRPCVQAHAARRNGTWRGIVRLTGLRVRLSPAVLRRTAQAS
Ga0370483_0069841_356_541	3300034124	Untreated Peat Soil	MYQLPELAKAICDDKRRAAEHRRLCAQAYAARRNGTRRGIVRLTGLRLRLSPALRRAARA
Ga0370514_009168_1763_1951	3300034199	Untreated Peat Soil	MYQLPELAKAICDDKRRAAEHRRPCAQAYDARRNGTRRGMVRLTGLRLRLFPAALRRAAQGF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087560

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences