NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F087527

Metagenome / Metatranscriptome Family F087527

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087527
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 62 residues
Representative Sequence VEELEKLPPTAWGLIAAAAILGFAAAWLWRWYRQYRMRAALRTAVTAAGSDHLVDMLVPDGMGG
Number of Associated Samples 98
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(10.000 % of family members)
Environment Ontology (ENVO) Unclassified
(30.909 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(39.091 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 57.61%    β-sheet: 0.00%    Coil/Unstructured: 42.39%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF00291PALP 25.45
PF14821Thr_synth_N 7.27
PF08544GHMP_kinases_C 1.82
PF13478XdhC_C 0.91
PF07883Cupin_2 0.91
PF12802MarR_2 0.91
PF13840ACT_7 0.91
PF00069Pkinase 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 3.64


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.18%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere6.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.45%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere5.45%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.55%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.55%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.55%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.55%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.64%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.73%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.73%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil2.73%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.82%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.82%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.82%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut1.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.82%
Attine Ant Fungus GardensHost-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens1.82%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.91%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.91%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.91%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.91%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil0.91%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.91%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.91%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.91%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.91%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.91%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.91%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.91%
Weathered Mine TailingsEnvironmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings0.91%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.91%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005260Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, AustraliaEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009826Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010049Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3Host-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010866Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010877Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010880Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012089Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ008 MetaGHost-AssociatedOpen in IMG/M
3300012181Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaGHost-AssociatedOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012982Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfieldEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021444Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02EnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300027537Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027583Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027590Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027681Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027965Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028573Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaGHost-AssociatedOpen in IMG/M
3300028781Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3EnvironmentalOpen in IMG/M
3300030764Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030946Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030967Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033179Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EMHost-AssociatedOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12053J15887_1012897013300001661Forest SoilVEELEKLPPTAWGLIAAAAIFGFAAAWIWRWYRQYRMRAALRTAVTGAGSDHLVDMLVPDGMGGGFHVDFLLL
Ga0062385_1030163623300004080Bog Forest SoilLEELSNLPPTAWAMIGGAAAVGFGISWLWRWYRNYSARKALRAAVTAAGSDHLV
Ga0063454_10116213813300004081SoilVEELEKLPPTAWALIAAAAVLGFAAAWVWRWYRQYRMRSALRAAVTAVGSDHLVDTLVPDGMGGGF
Ga0066677_1027293623300005171SoilLEELKNLPPTAWVLIAGAAVLGFGLSWLWRWYRQYRTRKALRTAVTAAGSEHLVDMLVPDGMGGGFHVDFLLLT
Ga0074072_106316623300005260SoilVEELEKLPPTAWALIAAAAVLGFTAAWVWRWYRQYRMRSALRAAVTAVGSDYLVDTLV
Ga0070683_10077807813300005329Corn RhizosphereVEELENLPPTAWALIVAAAILGFAAAWVWRWYRAYRLRAALRAVVTAAGSDNLVDMLVPDGMGGGFHVDFLLL
Ga0070683_10104788113300005329Corn RhizosphereVDELKNLSPTAWALIVGAAVVGFVGSWLWRWYRQYSARKALRAAV
Ga0070683_10107761223300005329Corn RhizosphereLEELSNLPPTAWALIVCAAAVGFGISWLWRWYRQYAARKVLRAAVTAAGSDHLVDMLVPDGMG
Ga0070690_10048328113300005330Switchgrass RhizosphereVEELEKLPPTAWALIAAAAVLGFTAAWVWRWYRQYRMRSALRAAVTAVGSDHLVDTLVPDGMGG
Ga0070680_10053873613300005336Corn RhizosphereVEDLQKLPPTAWVLIAAAAVLGFAGSWLWRWYRQYANRKALRAAVTSAGSDHLVDMLVPDGMGAG
Ga0070661_10180548713300005344Corn RhizosphereLEELSNLPPTAWALIVCAAAAGFGISWLWRWYRQYAARKVLRAAVTAAGSDHLVDMLVPDGM
Ga0070713_10153108513300005436Corn, Switchgrass And Miscanthus RhizosphereVEELAKLPPTAWALIAGAVVLGFGLSWAWRWYRHYRARKALRGAVTGAASDHLVNALVPDGMGGGFH
Ga0070711_10106921113300005439Corn, Switchgrass And Miscanthus RhizosphereVDELRNLPPTAWALIVGAAVVGFVGSWLWRWYRQYSARKALRAAVTAAGSDHLVDMLVPDGMGGG
Ga0070684_10008736243300005535Corn RhizosphereLEELSNLPPTAWALIACAAGVGFGISWLWRWYRQYAARKVLRAAVTAAGSDHLVDMLVPDGMGGGFHV
Ga0066697_1071635713300005540SoilVNDLSQLPPTAWVLIACAAALGFGAALAWRWYGHYRARKALRVAVTGGAADHLIDTLVP
Ga0070686_10062695813300005544Switchgrass RhizosphereVEELEKLPPTAWGLIAAAAILGFAAAWIWRWYRQYRMRAALRTAVTAAGSDHLVDMLVPDGMGGGFHVDFLLLTT
Ga0070693_10099333623300005547Corn, Switchgrass And Miscanthus RhizosphereVDELAKLPPTAWALIAGAVVLGFGLSWAWRWYRHYRARKALRGAVTGAASDHLVNALVPDGMGGGF
Ga0068855_10001145113300005563Corn RhizosphereVEDLQKLPPTAWVLIATAAVLGFVGHWAWRWYRQYSNRKALRAAVTAAGSDHLVDMLVPDGMGAGFHVDFLLL
Ga0068855_10247597223300005563Corn RhizosphereLEELSNLPPTAWALIVCAAAVGFGISWLWRWYRQYAARKVLRAAVTAAGSDHL
Ga0068857_10092285023300005577Corn RhizosphereLEELSNLPPTAWALIACAAGVGFGISWLWRWYRQYAARKVLRAAVTAAGSDH
Ga0070762_1116870323300005602SoilLSNLPPTAWVLIGGAAAVGFGISWLWRWYRNYSARKILRAAVTAAGSDHLVDMLVP
Ga0068856_10194742423300005614Corn RhizosphereVDELRNLPPTAWVLIAGAALVGFVGSWLWRWYRQYSARKALRAAVTAAGSDHLV
Ga0066903_10583655823300005764Tropical Forest SoilVFEDLQKLPPTAWVLIVVAAVLGFAGSWLWRWYRQYSTRKALRAAVTAAGSDHLVDMLVPDGMGAGF
Ga0070712_10181265623300006175Corn, Switchgrass And Miscanthus RhizosphereVEDLQKLPPTAWVLIAAAAVLGFAGSWLWRWYRQYANRKALRAAVTAAGSDHLVDMLVPDGMGA
Ga0066653_1030624213300006791SoilVNDLSQLPPTAWVLIACAAALGFGAALAWRWYGHYRARKALRVAVTGGAADHLIDTLVPD
Ga0079221_1091331513300006804Agricultural SoilVAEIEKLPPTAWVLIAIAAAGGFGISWLWRWYRQYSARKSLRMAVTATGSDHCIDVLVPDGMGGGFHVDFLLLTSRG
Ga0079221_1155492213300006804Agricultural SoilVDEIERLPPTAWALIAIAAALGFGISWLWRWYRQYSARKSLRMAVTATGS
Ga0073928_1088956223300006893Iron-Sulfur Acid SpringVDELEKLSPTAWVLIAVAAVLGFAAAWIWRWYRQYRMRAALRAAVTAAGADHLVDMLVPDGMGGGFHVDFL
Ga0105240_1047643613300009093Corn RhizosphereVDEIEKLPPTAWALIAAAAGLGFGVSWLWRWYRQYSARKSLRMAVTATGSDHVVDVLVPDGMGGGFHVDFLL
Ga0105248_1047531813300009177Switchgrass RhizosphereVEELEKLPPTAWALIAAAAVLGFAAAWVWRWYRQYRMRSALRAAVTAVGSDHLVDTLVPD
Ga0123355_1015467043300009826Termite GutVEELSRLPASTTWAIIAGAAGVGFGLSWFLRWYRQYAAR
Ga0126380_1162220523300010043Tropical Forest SoilVEELEKLPPTAWALIAAAAVLGFVAAWIWRWYRQYRRRAALRSAVTAAGSDYLVDMLVPDGMGGGFHVDFL
Ga0123356_1016432433300010049Termite GutVDELRGLSPAAWALLAGAAALVFGVSRAWRGYRRHRERKALRAAVTGGCTDHLIDKL
Ga0134125_1152364313300010371Terrestrial SoilVEDLQKLPPTAWVLIAAAAVLGFAGHWLWRWYRQYSNRKALRAAVTAAGSDHLVDMLVPDGMG
Ga0134128_1002678713300010373Terrestrial SoilVEDLQKLPPTAWVLIATAAVLGFVGHWAWRWYRQYSNRKALRAAVTAAGSDHLVDMLVPDGMGAGFHVDFLLLTAR
Ga0134128_1227448113300010373Terrestrial SoilVDELQKLTPTAWVLIAAAAALGFGVALGWRWYRHYRARKALRAAVTAGASDHMIDV
Ga0134128_1280334613300010373Terrestrial SoilVDEIGKLPPTAWVLIAIAAALGFGISWLWRWYRQYAARKSLRMAVTATGSDHVVDVLVPDGMGAGFHVDFL
Ga0105239_1043011713300010375Corn RhizosphereVDELQKLTPTAWVLIAAAAALGFGVALGWRWYRHYRARKALRAAVTAGASDHMIDVL
Ga0126344_130551113300010866Boreal Forest SoilVEELEKLPPTAWALIAAAAVLGFVAAWVWRWYRQYRMRSALRAAVTAAGSDHLVDMLVPDGMGGGFH
Ga0126356_1073451613300010877Boreal Forest SoilVEELEKLPPTAWALIAAAAVLGFGAAWVWRWYRQYRMRSALRTAVTAAGSDH
Ga0126350_1181965413300010880Boreal Forest SoilMIGGAAAVGFGISWLWRWYRNYSARKALRAAVTAAGSDNLVDMLVPDGMGGGFHV
Ga0137391_1109838513300011270Vadose Zone SoilVEELEKLPPTAWGLIAAAAILGFAAAWLWRWYRQYRMRAALRTAVTAAGSDHL
Ga0137393_1097268913300011271Vadose Zone SoilVEELEKLPPTAWALIAAAAVLGFVAAWVWRWYRQYRMRSALRAAVTAAGSDHLVDMLVPDGMGGGFHVDFLLLT
Ga0153924_109791523300012089Attine Ant Fungus GardensVDELRRLPPIAWILIGCAAALGFVLAWAWRWYRKYRARKALRAAVTAGCSDYLVDMLVPDGMGGGFHV
Ga0153922_111761213300012181Attine Ant Fungus GardensMAWVLIGAAVLLGFGLALAWRWYRHYRARRALRAAVTAGASDHLIDSLVPDGMGG
Ga0137399_1088573313300012203Vadose Zone SoilVDELSNLSPTAWALIAGAAALGFAISWLWRWYRQYSARKALRAAVTAAGS
Ga0137370_1046695723300012285Vadose Zone SoilVNDLSQLPPTAWVLIALAAALGFGAALAWRWYRHYRARKALRVAVTGGAVDHLVNALVPDGMG
Ga0137387_1084040113300012349Vadose Zone SoilVEELEKLPPTAWGLIAAAAILGFAAAWLWRWYRQYRMRAALRTAVTAAGSDHLVDMLVPDGMGG
Ga0137359_1177319223300012923Vadose Zone SoilVEELEKLPPTAWGLIAAAAILGFAAAWVWRWYRQYRMRAALRTAVTAAGSDHLVDMLVPDGIGGGFHVDFLLLT
Ga0137419_1184796013300012925Vadose Zone SoilVNELSQLPPTAWVLIACAAALGFGVALAWRWYRQYRARKALRVAVTGGAADHLVDTLVPDGMGG
Ga0137416_1078744613300012927Vadose Zone SoilLEELKNLPPTAWVLVAGAAVLGFGLSWLWRWYRQYRTRKALRTAVTAAGSENLVDMLVPDGMGGG
Ga0168317_104144523300012982Weathered Mine TailingsLSNLPPTAWALIACAAALGFGISWLWRWYRQYAARKVLRAAVTAAGS
Ga0164307_1035984313300012987SoilVDELQKLTPTAWVLIAAAAALGFGVALGWRWYRHYRARKALRAAVTAGASDHMIDVLV
Ga0157370_1027243813300013104Corn RhizosphereVEDLQKLPPTAWVLIATAAVLGFAGHWLWRWYRQYSNRKALRAAVTAAGSDHLVDMLVPDGMGAGFHVDFLLLTAR
Ga0157370_1149505613300013104Corn RhizosphereVDEIEKLPPTAWALIAAAAGLGFGVSWLWRWYRQYSARKSLRMAVTATGS
Ga0157372_1101368223300013307Corn RhizosphereVDELKNLSPTAWALIVGAAVVGFVGSWLWRWYRQYSARKALRAAVTAAGSDHLVDMLVPDGMGGGFHVDF
Ga0181534_1098490313300014168BogVNEELSKLTPTAWGLIVAAAAIGFALSWAWRWYRQYRARKALRAAVTAGTSEHLIDMLV
Ga0187783_1001041013300017970Tropical PeatlandVDELKRLPPTAWILIACALVLGFALALLWRWYRRYRARRALRTAVTSSSSDHLMDSLVPDGMGGAFHVDYLL
Ga0210401_1146166613300020583SoilLEELSNLPPTAWVMIGGAAAVGFGISWLWRWYRNYSARKALRAAVTAAGSDH
Ga0210406_1124581913300021168SoilVNDLSKLPPTAWVLIACAAALGFGVSLAWRWYRHYRARKALRVAVTGGAADHLVDTLVPDGM
Ga0210400_1085724623300021170SoilLEELSNLPPTAWVLIGGAAALGFALSWLWRWYRQYSNRKALRAAVTAAGSDHLVDMLVPDGMGGGF
Ga0210405_1141889323300021171SoilVEELSKLTPTAWALIGCAAALGFGLSWAWRWYRQYRARKALRAAVTGGCSDHLIDMLVPDGM
Ga0210393_1071298223300021401SoilMEELRNLTPTAWAMIAAAAVLGFAAAWLWRWYRQYRMRAALRAAVTAAGSDHLVD
Ga0210397_1031335423300021403SoilVNELGKLSATAWMLIAGAAVFGFAAAFAWRWYRHYRARKALRAAVTDGATDHLIDSLVPDGMGGGFH
Ga0213878_1039501613300021444Bulk SoilMQELGKLSHTAWALIACAAVLGFALSWAWRWYRQYRARTALRSAVTGGAVEHLVDSL
Ga0210392_1119029613300021475SoilLSNLPPTAWVMIGGAAAVGFGISWLWRWYRNYSARKALRAAVTAAGSDHLVDMLVPD
Ga0210402_1050055623300021478SoilVDELTKLTPTAWALIGIAAALGFALSWAIRWYRHYRARKALRAAVTGGTSEHLIDTLVPDGMGAGFHVDYVL
Ga0242654_1035839413300022726SoilVEELEKLPPTAWALIAAAAVLGFAAAWLWRWYRQYRMRSALRAAVTAAGSDHLVDMLVPDGMGGGFHVD
Ga0137417_123100523300024330Vadose Zone SoilVNDLSQLPPTAWVLIASAAALGFGAALAWRWYRQYRARKALRVAVTGGAADHMADVLVPDGMGGG
Ga0207695_1022965813300025913Corn RhizosphereLEELSNLPPTAWGLIITAAAVGFGISWLWRWYRQYSARKALRAAVTAAGSDHLVDMLVPDGMGGGFHVDFLL
Ga0207671_1082742213300025914Corn RhizosphereVEELEKLPPTAWALIAAAAVLGFAAAWVWRWYRQYRMRSALRAAVTAVGSDHLVDTLVP
Ga0207693_1088759323300025915Corn, Switchgrass And Miscanthus RhizosphereLEELSNLPPTAWGLIIGAAAVGFGISWLWRWYRQYAARKVLRAA
Ga0207709_1084788613300025935Miscanthus RhizosphereVDELQKLTPTAWVLIAAAAALGFGVALGWRWYRHYRARKALRAAVTAGASDHMIDVLVPDGMGGGGFHVD
Ga0207661_1125548023300025944Corn RhizosphereLEELSNLPPTAWALIVCAAAVGFGISWLWRWYRQYAARKVLRAAVTAAGSDHLVDMLVPDGMGGGFHVDFLLLTA
Ga0207702_1252414313300026078Corn RhizosphereLEELSNLPPTAWGLIIGAAAVGFGISWLWRWYRQYAARKVLRAAVTAA
Ga0207674_1206234813300026116Corn RhizosphereLEELSNLPPTAWALIACAAGVGFGISWLWRWYRQYAARKVLRAAVTAAGSDHR
Ga0207675_10032287923300026118Switchgrass RhizosphereVEELEKLPPTAWGLIAAAAILGFAAAWIWRWYRQYRMRAALRTAVTAAGSDHLVDML
Ga0207698_1181931523300026142Corn RhizosphereVDEIEKLPPAAWVLIGAAAAVGFGVSWVWRWYRQYSARKSLRQAVTAAGSDHTVDVLVPDGMGGGFHVD
Ga0209375_121841923300026329SoilVNDLSQLPPTAWVLIACAAALGFGAALAWRWYRHYRARKALRVAVTGGAADHLVNALVPDGMGGGFHV
Ga0209419_100890633300027537Forest SoilVNDLSQLPPTAWVLIACAAALGFGAALAWRWYRQYRARKALRVAVTGGAADHLVDRLVPD
Ga0209527_102349823300027583Forest SoilVNDLSQLPPTAWVLIACAAALGFGAALAWRWYRQYRARKALRVAVTGGAADHLVDRLVPDGMGGGF
Ga0209116_100359613300027590Forest SoilMNVDELRHLSPTVWTLIAGAAAVGFVLSWAWRWYRQYRARKALRAAVTAGSAEHLIDTLVPDGMGGGFHIDFLLLTL
Ga0208991_120457213300027681Forest SoilVEELEKLPPTAWGLIAAAAVLGFAAAWVWRWYRQYRMRAALRTAVTGAGSDHLVDMLVPDGMGGGFH
Ga0209415_1055546723300027905Peatlands SoilLEELSNLPPTAWIMIGGAAALGFGISWLWRWYRNYSARKALRAAVTAAGSDHLV
Ga0209062_122878613300027965Surface SoilVDEIEKLPPAAWVLIAVAAALGFGISWLWRWYRAYRARKSLRMAVTAAG
Ga0268264_1051567723300028381Switchgrass RhizosphereLEELSNLPPTAWVLIVSAAALGFGISWLWRWYRQYSVRKALRAAVTAAGSDHLVDMLVPDGMGGGFHVD
Ga0265334_1000755643300028573RhizosphereLEELSNLPPTAWALIACAAAVGFGISWLWRWYRQYAARKVLRAAVTAAGSDHLVDM
Ga0302223_1011103723300028781PalsaVNDELSKLTPTAWGLIVAAAAVGFGLSWAWRWYRQYRARKALRAAVTAGTSEHLIDVLV
Ga0265720_101122513300030764SoilLSNLPPTAWVLIGGAAAVGFGISWLWRWYRNYSARKVLRAAVTAAGSDHLVDMLVPDGM
Ga0075379_1073872823300030946SoilLDELSNLPPTAWVLIVTAAAIGFGISWLWRWYRNYSARKALRAAVTAAGSDHLVDQLVPDGMGGGFHVDFLLLTGR
Ga0075399_1106481913300030967SoilVEELEKLPPTAWALIAAAAVLGFGAAWVWRWYRQYRMRSALRAAVTAAGSDHL
Ga0170820_1403117223300031446Forest SoilVEELEKLPPTAWGLIAAAAILGFAAAWVWRWYRQYRMRAALRTAVTAAGSDHLVDMLVPDGMGGGFHVEK
Ga0170820_1774467923300031446Forest SoilVDELTKLTPTAWALIGIAAALGFALSWAIRWYRHYRARKALRAAVTGGTSEHLIDTLVPDGMGAGFH
Ga0310686_10005363723300031708SoilLEELSNLPPTAWILIGGAAAVGFGISWLWRWYRNYSARKVLRAAVTAAGSDHLVDM
Ga0310686_10131230123300031708SoilMESYRRLVDVDEIEKLPPTAWVLIALAAALGFGVSWLWRWYRQYRARKSLRLAVTATGSDHVIDVLVPDG
Ga0310686_10287303123300031708SoilLDELSKLTPTAWAMIVGAAALGFGVSWAWRWYRQYRARKALRTAVTSGAMEHLIDTLVPDGMGGGYHVD
Ga0307469_1142826023300031720Hardwood Forest SoilVEELEKLPPTAWALIAAAAVLGFAAAWVWRWYRQYRMRSALRAAVTAVGSDHLVDTLVPDGMGGGFHVDF
Ga0307468_10006881913300031740Hardwood Forest SoilVDELAKLPPTAWALIAGAAVVGFGLSWAWRWYRHYRARKALRAAVTGGASDHMADSLVPDGMGGGYHV
Ga0307468_10209576513300031740Hardwood Forest SoilVDELQKLTPTAWALIAAAAALGFGVAMGWRWYRHYRARKALRAAVTSGASDHLIDVLVPDGMGG
Ga0307473_1156164213300031820Hardwood Forest SoilVEELEKLSPTAWALIAAAAILGFAAAWVGRWYRQYRMRAALRTAVTAAGSDHLVD
Ga0302322_10126516323300031902FenVEELEKLPPTAWALIAAAAILGFGAAWVWRWYRQYRMRAALRTAVTAAGSDHL
Ga0307479_1001151293300031962Hardwood Forest SoilVEELEKLPPTAWGLIAAAALLGFAAAWVWRWYRQYRMRAALRTAVTAAGSDHLVDMLVPD
Ga0348332_1194951113300032515Plant LitterLEELSNLSPTAWVLIVAAAAIGFAISWLWRWYRNYSARKVLRAAV
Ga0335081_1105714613300032892SoilVDELKNLPPTAWVLIAAAAVLGFAGSWLWRWYRHYRIRAALRAAVTAAGSDHLVDMLVPDGMG
Ga0335075_1070892013300032896SoilVDEIEKLPPTAWVLIAIAAALGFGISWLWRWYRQYSARKSLRMAVTATGSDHAVDVLVPD
Ga0335075_1155092813300032896SoilVDEIEKLPPTAWVLIAAAAALGFGVSWLWRWYRQYRTRKSLRMAVTATGSDHVVDVLVPD
Ga0335083_1137342013300032954SoilLEELSRLPPSAWGMIAGAAALGFAISWLWRWYRNYSARKVLRAAVTA
Ga0335084_1129573223300033004SoilMDELAKLTPTAWAMIAGAAALGFALSWAWRWYRQYRARKALRAAVTGGAVEFLADMLVPDGMGGGFHVDY
Ga0307507_1043141523300033179EctomycorrhizaVEELEKLPPTAWALIAAAAVLGFTAAWVWRWYRQYRMRSALRAAVTAVGSDHLVDTLVPDGMGGGFHVDFLLLTT
Ga0310811_1040125713300033475SoilLEELSNLPPTAWAMIIGAAVLGFAISWLWRWYRQYAARKVLRAAVTAAGSDHLVDMLVPDGMGGGFHV


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