Metagenome Family F087517

Basic Information
Family ID	F087517
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	47 residues
Representative Sequence	EALRDLLYPASPPVFPLSSSMATLVLFSAFMFGLAFIMVNRRTTKPAA
Number of Associated Samples	100
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.27 %
% of genes from short scaffolds (< 2000 bps)	93.64 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Bacteria (98.182 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (14.546 % of family members)
Environment Ontology (ENVO)	Unclassified (31.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.727 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.79% β-sheet: 0.00% Coil/Unstructured: 59.21%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF04238	DUF420	78.18
PF02265	S1-P1_nuclease	4.55
PF00155	Aminotran_1_2	1.82
PF02585	PIG-L	0.91
PF00436	SSB	0.91
PF00664	ABC_membrane	0.91
PF13304	AAA_21	0.91
PF00990	GGDEF	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2322	Cytochrome oxidase assembly protein CtaM/YozB, DUF420 family	Posttranslational modification, protein turnover, chaperones [O]	78.18
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.91
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.91
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.27 %
Unclassified	root	N/A	1.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	11.82 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.73 %
Unclassified	root	N/A	1.82 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Unclassified	root	N/A	1.82 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.91 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.91 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Unclassified	root	N/A	1.82 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.91 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	6.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Unclassified	root	N/A	1.82 %
unclassified Ktedonobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → unclassified Ktedonobacterales	0.91 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.82 %
Unclassified	root	N/A	1.82 %
Ktedonobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → unclassified Ktedonobacterales → Ktedonobacterales bacterium	0.91 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10176610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	866	Open in IMG/M
3300001915\|JGI24741J21665_1051480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	606	Open in IMG/M
3300004114\|Ga0062593_103376597	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300005175\|Ga0066673_10846884	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300005176\|Ga0066679_10366133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	943	Open in IMG/M
3300005177\|Ga0066690_10402800	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	929	Open in IMG/M
3300005187\|Ga0066675_10199498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1405	Open in IMG/M
3300005293\|Ga0065715_10225510	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300005295\|Ga0065707_10179035	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1430	Open in IMG/M
3300005365\|Ga0070688_101406962	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005437\|Ga0070710_11407551	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300005445\|Ga0070708_100495932	All Organisms → cellular organisms → Bacteria → Acidobacteria	1152	Open in IMG/M
3300005447\|Ga0066689_11041902	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005544\|Ga0070686_101900164	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300005552\|Ga0066701_10142637	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1437	Open in IMG/M
3300005552\|Ga0066701_10370881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300005556\|Ga0066707_10895808	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300005576\|Ga0066708_10258817	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300005617\|Ga0068859_100016880	All Organisms → cellular organisms → Bacteria	7327	Open in IMG/M
3300005719\|Ga0068861_100589762	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1018	Open in IMG/M
3300005843\|Ga0068860_101311283	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300005844\|Ga0068862_102278404	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	553	Open in IMG/M
3300005921\|Ga0070766_10194231	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1266	Open in IMG/M
3300005995\|Ga0066790_10124105	All Organisms → cellular organisms → Bacteria → Acidobacteria	1107	Open in IMG/M
3300006028\|Ga0070717_11954942	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300006046\|Ga0066652_101465270	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300006047\|Ga0075024_100407361	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300006176\|Ga0070765_100042452	All Organisms → cellular organisms → Bacteria	3652	Open in IMG/M
3300006237\|Ga0097621_102024929	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300006893\|Ga0073928_10670853	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300007819\|Ga0104322_128886	All Organisms → cellular organisms → Bacteria → Acidobacteria	1503	Open in IMG/M
3300009089\|Ga0099828_10631797	All Organisms → cellular organisms → Bacteria → Acidobacteria	963	Open in IMG/M
3300009089\|Ga0099828_11655158	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300009090\|Ga0099827_11229653	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300009174\|Ga0105241_10022680	All Organisms → cellular organisms → Bacteria	4651	Open in IMG/M
3300009700\|Ga0116217_10510009	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300009792\|Ga0126374_11406644	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300010359\|Ga0126376_12616749	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300010360\|Ga0126372_11576498	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300010366\|Ga0126379_12839065	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300012010\|Ga0120118_1088406	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300012198\|Ga0137364_10580860	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300012202\|Ga0137363_10860499	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300012205\|Ga0137362_10351753	All Organisms → cellular organisms → Bacteria → Acidobacteria	1276	Open in IMG/M
3300012207\|Ga0137381_10793477	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300012356\|Ga0137371_11332339	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300012469\|Ga0150984_106980447	All Organisms → cellular organisms → Bacteria → Acidobacteria	1875	Open in IMG/M
3300012469\|Ga0150984_121335517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300012532\|Ga0137373_10425564	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1027	Open in IMG/M
3300012922\|Ga0137394_11250450	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300012929\|Ga0137404_10230242	All Organisms → cellular organisms → Bacteria → Acidobacteria	1583	Open in IMG/M
3300012929\|Ga0137404_11601591	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300012951\|Ga0164300_10924864	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300012960\|Ga0164301_11634731	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012961\|Ga0164302_10750140	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300012961\|Ga0164302_10963142	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300012988\|Ga0164306_10842334	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300012989\|Ga0164305_12012480	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300013297\|Ga0157378_11361619	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300014968\|Ga0157379_10099315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2613	Open in IMG/M
3300015264\|Ga0137403_10298184	All Organisms → cellular organisms → Bacteria → Acidobacteria	1507	Open in IMG/M
3300015374\|Ga0132255_105385536	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300017966\|Ga0187776_10471267	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300017966\|Ga0187776_10837311	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300018468\|Ga0066662_10635743	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1006	Open in IMG/M
3300018468\|Ga0066662_12764818	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300019879\|Ga0193723_1173853	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300020579\|Ga0210407_10487679	All Organisms → cellular organisms → Bacteria → Acidobacteria	963	Open in IMG/M
3300021377\|Ga0213874_10465463	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300021403\|Ga0210397_10537350	All Organisms → cellular organisms → Bacteria → Acidobacteria	888	Open in IMG/M
3300021420\|Ga0210394_11626911	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300021432\|Ga0210384_11419348	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300021478\|Ga0210402_10690057	All Organisms → cellular organisms → Bacteria → Acidobacteria	944	Open in IMG/M
3300021559\|Ga0210409_10942925	All Organisms → cellular organisms → Bacteria → Acidobacteria	737	Open in IMG/M
3300022557\|Ga0212123_10579512	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300025912\|Ga0207707_10731299	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300025913\|Ga0207695_11080619	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300025913\|Ga0207695_11516454	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300025924\|Ga0207694_10808101	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300025927\|Ga0207687_10329372	All Organisms → cellular organisms → Bacteria → Acidobacteria	1238	Open in IMG/M
3300025927\|Ga0207687_10567599	All Organisms → cellular organisms → Bacteria → Acidobacteria	953	Open in IMG/M
3300025928\|Ga0207700_10608558	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300026277\|Ga0209350_1054658	All Organisms → cellular organisms → Bacteria → Acidobacteria	1152	Open in IMG/M
3300026285\|Ga0209438_1227967	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300026308\|Ga0209265_1004198	All Organisms → cellular organisms → Bacteria	4431	Open in IMG/M
3300026354\|Ga0257180_1062452	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300026540\|Ga0209376_1248530	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300026547\|Ga0209156_10101693	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1428	Open in IMG/M
3300027773\|Ga0209810_1173207	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300027862\|Ga0209701_10470644	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300027875\|Ga0209283_10487792	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300027894\|Ga0209068_10898625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → unclassified Ktedonobacterales → Ktedonobacterales bacterium	524	Open in IMG/M
3300027915\|Ga0209069_10997736	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300029989\|Ga0311365_10630644	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300031236\|Ga0302324_100798481	All Organisms → cellular organisms → Bacteria → Acidobacteria	1314	Open in IMG/M
3300031525\|Ga0302326_12338276	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300031640\|Ga0318555_10764674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	522	Open in IMG/M
3300031718\|Ga0307474_10932293	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300031720\|Ga0307469_10148040	All Organisms → cellular organisms → Bacteria → Acidobacteria	1752	Open in IMG/M
3300031720\|Ga0307469_10510921	All Organisms → cellular organisms → Bacteria → Acidobacteria	1055	Open in IMG/M
3300031740\|Ga0307468_101520354	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300031823\|Ga0307478_10876089	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300031941\|Ga0310912_11315627	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300032043\|Ga0318556_10434070	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300032892\|Ga0335081_11176681	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300032893\|Ga0335069_10667757	All Organisms → cellular organisms → Bacteria → Acidobacteria	1185	Open in IMG/M
3300033412\|Ga0310810_10494204	All Organisms → cellular organisms → Bacteria → Acidobacteria	1219	Open in IMG/M
3300033475\|Ga0310811_11334976	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.73%
Host-Associated	Host-Associated	17.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.18%
Plants	Host-Associated → Plants	17.27%
Aquatic	Environmental → Aquatic	4.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.36%
Sediment	Environmental → Aquatic → Sediment	2.73%
Peat	Environmental → Terrestrial → Peat	2.73%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.82%
Roots	Host-Associated → Plants → Roots	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.91%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.73%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.91%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.73%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.91%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.18%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.64%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.73%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.82%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.82%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.91%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Permafrost Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Permafrost Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.91%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.91%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.91%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300001915	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007819	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-1-2 Soapdenovo	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_101766101	3300001867	Forest Soil	GVEALRDLLYPGSTSAFPLASSLLILVLFAGVMFGISFLMVNRRTTKPGA*
JGI24741J21665_10514801	3300001915	Corn Rhizosphere	YGVEALRSVLYPGSPRAFSLEASMATLVLFALVMFGVAFLMVNRKTTRPAA*
Ga0062593_1033765972	3300004114	Soil	YGVEALRSVLYPGSRGEFSLVASMATLVLFSLVMFGAAFLIVNRRSTKPAA*
Ga0066673_108468841	3300005175	Soil	EALRDLLYPASPAVFPFSSSLATVVLFSVFMFGLSFLIVNRRTTKPAA*
Ga0066679_103661333	3300005176	Soil	EALRDLLYPAGPEFFPLSSSLATLVLFSALMFGLSFIMVNRRTTKPAA*
Ga0066690_104028003	3300005177	Soil	YGVEALRQLLYPSSDGSLGASLATLILFSLLMFGLGFVMVNRRSTKPAA*
Ga0066675_101994983	3300005187	Soil	TYGVEALRDLLYPAGQGEFSLLASMSTLILFSLFMFGLAFLMVNRRTTKPAA*
Ga0065715_102255104	3300005293	Miscanthus Rhizosphere	YGVEALRDLLFPHSAPSFPLASSLATLILFAGAMFGLSFLMVNRRTTKPAA*
Ga0065707_101790354	3300005295	Switchgrass Rhizosphere	EALRTLLYPGSPSDFSLTESLATLVLFSFFMFAIAFVVANRRTTKPVA*
Ga0070688_1014069622	3300005365	Switchgrass Rhizosphere	LRTLLYPGTEAFALGASMATLILFSAFMFGLAFIMVNRRTTKPAA*
Ga0070710_114075511	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	GVEALRQLLYPTNQNSLAASLATLVLFSLFMFGLSFVLVNRRTTKPAA*
Ga0070708_1004959321	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	PARLESFPLSSSLATLVLFSALMFGLSFIMVNRRTTKPAA*
Ga0066689_110419021	3300005447	Soil	ALRSLLYPATPESFSLFSSLATLILFSGFMFGLAFVMVNRRTTRPAA*
Ga0070686_1019001642	3300005544	Switchgrass Rhizosphere	LYPGTEAFALGASMATLILFSAFMFGLAFIMVNRRTTKPAA*
Ga0066701_101426371	3300005552	Soil	EALRQLLYPATGGTLFESMATLVLFSLFMFGLAFLMANRRTTKPAA*
Ga0066701_103708812	3300005552	Soil	LFPGTGGALVASMATLILFSLFMFGLAFLAVNRRTTKPAA*
Ga0066707_108958081	3300005556	Soil	LYPGSGGVLVESMATLILFSLFMFGLAFLMVNRRTTKPAA*
Ga0066708_102588171	3300005576	Soil	TYGVDALRELLFPGTGGALLASMATLVLFSSFMFGLAFLAVNRRTTKPAA*
Ga0066691_109676942	3300005586	Soil	LYPTNQNSLPASLATLVLFSLFMFGLSFVLVNRRTTKPAA*
Ga0068859_1000168809	3300005617	Switchgrass Rhizosphere	VEALRQLLFPGNPGVASLSASFATLVLFSLFMFGLAFLMANRRTTKPAA*
Ga0068861_1005897621	3300005719	Switchgrass Rhizosphere	YGVEALRTLLYPGTEAFALGASMATLILFSAFMFGLAFIMVNRRTTKPAA*
Ga0068860_1013112831	3300005843	Switchgrass Rhizosphere	RSVLYPASRGEFSLVASMATLVLFSLVMFGAAFVMVNRRSTKPAA*
Ga0068862_1022784041	3300005844	Switchgrass Rhizosphere	TLLYPGTEAFALGASMATLILFSAFMFGLAFIMVNRRTTKPAA*
Ga0070766_101942311	3300005921	Soil	TYGVEALRTLLYPNGTHEFSLASSMATLILFSLFMFGLAFVVANRRTTKPVA*
Ga0066790_101241051	3300005995	Soil	LTYGVEALRDVLFPGNLPEFPLASSLATLVLFSAFMFGLSFIMVSRRTTKPAA*
Ga0070717_119549421	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RTLLYPGTPEVFPLFSSLATLILFSGFMFGLAFVMVNRRTTRPAA*
Ga0066652_1014652702	3300006046	Soil	TYGVEALRQLLYPAQAGTLFESMATLVLFSLFMFGLAFLMANRRTTKPAA*
Ga0075024_1004073611	3300006047	Watersheds	LYPGNAAAFPLASSLATLVLFSGLMFGLSFIMVNRRSTKPAA*
Ga0070765_1000424527	3300006176	Soil	TLLYPNGTHEFSLASSMATLILFSLFMFGLAFVVANRRTTKPVA*
Ga0097621_1020249292	3300006237	Miscanthus Rhizosphere	GNVAEFALASSLATLVLFSAFMFGLSFVMVSRRTTKPAA*
Ga0073928_106708533	3300006893	Iron-Sulfur Acid Spring	VEALRDLLYPGSQGEFSLLASMSTLVLFSLFMFGLAFLMVNRRTTKPAA*
Ga0104322_1288863	3300007819	Permafrost Soil	LLYPTNQNSLAASLATLVLFSLFMFGLGFVMVNRRTTKPAA*
Ga0099828_106317971	3300009089	Vadose Zone Soil	SLLYPASPAVFPLPASMATLVLFSLFMFSLAFVMVNRRTTKPAA*
Ga0099828_116551582	3300009089	Vadose Zone Soil	QALRDLLYPASQGEFSLLASMATLVLFSLFMFGLAFLMVNRRSTRPAA*
Ga0099827_112296533	3300009090	Vadose Zone Soil	NLLYPASPAVFPLSSSMATLVLFSAFMFGLAFIMVNRRTTKPAA*
Ga0105241_100226809	3300009174	Corn Rhizosphere	TYGVESLRDLLYPGNQTEFPLTSSLATLVLFSALMFGLSFIMVSRRTTKPAA*
Ga0116217_105100091	3300009700	Peatlands Soil	EALRDLLYPASTAVFSLPESMATLLLFTLFMFGLCFVMVNRRSTKPGA*
Ga0126374_114066441	3300009792	Tropical Forest Soil	RQLFYPATAGESSLAAALATLVLFSFFMFGLAFLMANRRTTKPAA*
Ga0126376_126167491	3300010359	Tropical Forest Soil	LLMQLNPLTYVVAALRELPYPAPGGALFESMPTLVLFSLFMFGLAFLMANRRTTKPAA*
Ga0126372_115764981	3300010360	Tropical Forest Soil	TYGVEALRALLYPDVLTDTSLAASMATLVLFSLFMFGLAFVVANRRSTKPAA*
Ga0126379_128390651	3300010366	Tropical Forest Soil	RQLFYPCTSGESSLAAAMATLVLFSLFMSGLAFLMANRRTTKPAA*
Ga0120118_10884061	3300012010	Permafrost	TYGVEALRDLLYPASKGEFSLPASMATLVLFSLFMFGLAFLMVNRRTTKPAA*
Ga0137364_105808603	3300012198	Vadose Zone Soil	VEALRQLLFPGSPGIASLSASLATLLLFSFFMFGLAFLMANRRTTKPVA*
Ga0137363_108604992	3300012202	Vadose Zone Soil	ALRALLYPQSPTQFSLASSMATLVLFSLFMFGLAFVVANRRTTKPAA*
Ga0137362_103517534	3300012205	Vadose Zone Soil	EALRDLLYSGGPEFFPLSSSLATLVLFSALMFGLSFVMVNRRTTKPAA*
Ga0137381_107934772	3300012207	Vadose Zone Soil	QANPLTYGVEALRELLYPGGGGMLVESMATLILFSLFMFGLAFLMVNRRTTKPAA*
Ga0137371_113323392	3300012356	Vadose Zone Soil	LRQLLYPATGGTLFESMATLVLFSLFMFGLAFLMVNRRTTKPAA*
Ga0150984_1069804474	3300012469	Avena Fatua Rhizosphere	EALRMLLYPASPEVFPLSASLATLVLFTLVMFGLAFVMVNRRTTKPAA*
Ga0150984_1213355171	3300012469	Avena Fatua Rhizosphere	EALRLLLYPGSTGLVSLFSAMATLLLFSLFMFGLAFVMVNRRTTKPAA*
Ga0137373_104255643	3300012532	Vadose Zone Soil	INPLTYGVVALRQLLYPATGGTLFESMATLVLFSLFMFGLAFLMVNRRTTKPAA*
Ga0137394_112504503	3300012922	Vadose Zone Soil	LTYGVEALRDLLYPGGPEFFPLSSSLATLVLFSALMFGLSFVMVNRRTTKPAA*
Ga0137404_102302424	3300012929	Vadose Zone Soil	YGVEALRQLLFPGSPGIASLSASLATLLLFSLFMFGVAFLMANRRTTKPIA*
Ga0137404_116015912	3300012929	Vadose Zone Soil	PLTYGVEALRTLMYPDAPRTFSLLESILTLVLFTMFMFGLAFALVNRKKSSG*
Ga0164300_109248642	3300012951	Soil	PTEFPLPSSLATLVLFSALMFGLSFIMVSRRTTKPAA*
Ga0164301_116347312	3300012960	Soil	ALRDLLYPGNLTEFPLPSSLATLVLFSALMFGLSFIMVSRRTTKPAA*
Ga0164302_107501403	3300012961	Soil	LLYPGNLTEFPLASSLATLVLFSALMFGLSFIMVSRRTTKPAA*
Ga0164302_109631421	3300012961	Soil	EALRELLYPASGGALFESLATLLLFSLFMFGVAFLMANRRTTKPAA*
Ga0164306_108423343	3300012988	Soil	YPGNPTEFPLPSSLATLVLFSALMFGLSFIMVSRRTTKPAA*
Ga0164305_120124801	3300012989	Soil	RDALYPGKLPEFPLASSLATLVLFSAFMFGLSFIMVSRRTTKPAA*
Ga0157378_113616191	3300013297	Miscanthus Rhizosphere	NVAEFALASSLATLVLFSAFMFGLSFVMVSRRTTKPAA*
Ga0157379_100993151	3300014968	Switchgrass Rhizosphere	PGNQTEFPLTSSLATLVLFSALMFGLSFIMVSRRTTKPAA*
Ga0137403_102981844	3300015264	Vadose Zone Soil	LTYGVEALRQLLFPGSPGIASLSASLATLLLFSLFMFGVAFLMANRRTTKPIA*
Ga0132255_1053855362	3300015374	Arabidopsis Rhizosphere	LRDALYPGNLTEFPLPSSLATLVLFSAFMFGLSFIMVSRRTTKPAA*
Ga0187776_104712673	3300017966	Tropical Peatland	LLYPASNTAFPLFSSLATLILFAGTMFGLSFLMVNRRTTKPAA
Ga0187776_108373111	3300017966	Tropical Peatland	VEGLRSLLYPASPQEFSLSASLATLILFSLFMFGLGFFMANRRTTKPAA
Ga0066662_106357433	3300018468	Grasslands Soil	RQLLYPEIGGTLFESMATLLLFSLFMFALAFLVANRRTTKPAA
Ga0066662_127648183	3300018468	Grasslands Soil	LRDLLYPANPGEFSLAASTATLVLFSLFMFGLAFLMVNRLSTKPAA
Ga0193723_11738531	3300019879	Soil	ALRGLLYPAGPEFFSLSSSLATLVLFSALMFGLSFIMVNRRTAKPAA
Ga0179592_102301703	3300020199	Vadose Zone Soil	EFFPLPSSLATLVLFSALMFGLSFIMVNRRTTKPAA
Ga0210407_104876793	3300020579	Soil	TEFFPLSSSLATLVLFSALMFALSFVMVNRRTTKPAV
Ga0213874_104654631	3300021377	Plant Roots	LTYGVEALRDLLYPVRGGEFSLAAALAVLVLFSLFMFSLAFGVANRRSTKPAA
Ga0210397_105373501	3300021403	Soil	LLYPGTTEFFPLSSSLATLVLFSALMFALSFVMVNRRTTKPAA
Ga0210394_116269112	3300021420	Soil	VEALRNLLYPASPVVSPLPVSLAALVLFTACMFGLSFIMVNRRTTRPAA
Ga0210384_114193481	3300021432	Soil	TYGVEALRTVLYPESASQFTLQSSLATLLLFTLFMFGLAFFMASRRTTQPVA
Ga0210402_106900571	3300021478	Soil	AEFPLVSSLATLVLFSVFMFGLSFIMVSRRTTKPAA
Ga0210409_109429252	3300021559	Soil	GVEALRDVLYPGNLPEFPLASSLATLVLFSAFMFSLSFMMVNRRTTKPAA
Ga0212123_105795123	3300022557	Iron-Sulfur Acid Spring	LRDLLYPGSQGEFSLLASMSTLVLFSLFMFGLAFLMVNRRTTKPAA
Ga0207707_107312991	3300025912	Corn Rhizosphere	TYGVEALRSVLYPASRGEFSLVASMATLVLFSLVMFGAAFVMVNRRSTKPAA
Ga0207695_110806191	3300025913	Corn Rhizosphere	EALRLLLYPGSTGLVSLFSAIATLLLFSLFMFGLAFVMVNRRTTKPAA
Ga0207695_115164541	3300025913	Corn Rhizosphere	GVEALRSVLYPGSPRAFSLEASMATLVLFALVMFGVAFLMVNRKTTRPAA
Ga0207694_108081011	3300025924	Corn Rhizosphere	LTYGVEALRDLLYPGNPTEFPLPSSLATLVLFSALMFGLSFIMVSRRTTKPAA
Ga0207687_103293721	3300025927	Miscanthus Rhizosphere	NQTEFPLTSSLATLVLFSALMFGLSFIMVSRRTTKPAA
Ga0207687_105675991	3300025927	Miscanthus Rhizosphere	DILYPGNVAEFALASSLATLVLFSAFMFGLSFVMVSRRTTKPAA
Ga0207700_106085582	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LLYPGSPTQFSLASSMATLILFSLFMFGLAFVVANRRTTKPAA
Ga0209350_10546581	3300026277	Grasslands Soil	GVEALRSLLYPGTPEVFPLFSSLATLILFSGFMFGLAFVMVNRRTTKPAA
Ga0209438_12279672	3300026285	Grasslands Soil	PLTYGVEALRILLYPDKPAEFSLASAMATLVLFSLFMFGLAFVVANRRSTKPAA
Ga0209265_10041981	3300026308	Soil	GVEALRSLLYPASSTAFPLASSLATLILFAGAMFGLSFLMVNRRTTKPAA
Ga0257180_10624522	3300026354	Soil	GNTAAFPLASSLATLVLFSGLMFGLSFIMVNRRSTKPAA
Ga0209376_12485303	3300026540	Soil	YPTNAPVFPLGSSLATLLLFAVFMFTLSFLMVNRRTTKPAA
Ga0209156_101016933	3300026547	Soil	RFSRHRVEALRQLLYPETGGTLFESMATLLLFALFMFGLAFLMANRRTTKPAA
Ga0209810_11732073	3300027773	Surface Soil	GVEALRQLLYPTSEGALASSLATLLLFSLFMFGIAFAMVNRRTTKPAA
Ga0209701_104706443	3300027862	Vadose Zone Soil	EALRDLLYPASPPVFPLSSSMATLVLFSAFMFGLAFIMVNRRTTKPAA
Ga0209283_104877921	3300027875	Vadose Zone Soil	SLLYPASPAVFPLPASMATLVLFSLFMFSLAFVMVNRRTTKPAA
Ga0209068_108986252	3300027894	Watersheds	VVRFSGEALTYGVEALRDLLYPARLESFPLSSSLATLFLFSALMFGLSFIMVNRRSTKPA
Ga0209069_109977361	3300027915	Watersheds	PLTYGVEALRSLLYPETPAAFSLLASLLTLVLFAGFLFGIAFFLVNRRSTRVA
Ga0311365_106306443	3300029989	Fen	YGVEALRMLLYPDSPQVFTLAASLATLLLFTLVMFGLAFVMVNRRTTKPAA
Ga0302324_1007984811	3300031236	Palsa	YGVEALRDLLYPAAPQVFSLPESLATLTLFTLFMFGLCFVMVNRRTTKPGA
Ga0302326_123382761	3300031525	Palsa	LYPAAPQVFSLPESMATLTLFTLFMFGLCFVMVNRRTTKPGA
Ga0318555_107646741	3300031640	Soil	VEALRSLLYPNVPTETSLAASMATLVLFSLFMFGLAFVVANRRTTKPAA
Ga0307474_109322931	3300031718	Hardwood Forest Soil	EALRLLLYPASMSQFTLESSLATLLLFTLFMFGIAFFVASRRTTKPVA
Ga0307469_101480403	3300031720	Hardwood Forest Soil	ALRILLYPDKPAEFSLASAMATLVLFSLFMFGLAFVVANRRSTKPAA
Ga0307469_105109214	3300031720	Hardwood Forest Soil	LRSLLYPATAEVFPLSSSLATLILFSGFMFGLAFVMVNRRTTRPAA
Ga0307468_1015203541	3300031740	Hardwood Forest Soil	ALRDLLYPGNLTEFPLASSLATLVLFSALMFGLSFIMVSRRTTKPAA
Ga0307478_108760891	3300031823	Hardwood Forest Soil	SLLYPTSVSEFSIFSSLATLVLFSLFMFGLAFVMVNRRTNKPAA
Ga0310912_113156271	3300031941	Soil	YGVEALRTLLYPETPAQFTLQASLATLVLFTLFMFGLAFVVVNRRTTKPAA
Ga0318556_104340701	3300032043	Soil	EALRHLLYPEGPVVFRFAACVATLLLFSLFMFGLAFVMVNRRTTKPAA
Ga0335081_111766811	3300032892	Soil	PGAPAVASLPASLATLVLFSGFMFALAFIMVNRRTTRPAA
Ga0335069_106677571	3300032893	Soil	ALYPGNLAEFPLASSLATLVLFSAFMFALSFVMVSRRTTKPAA
Ga0310810_104942044	3300033412	Soil	LTYGVEALRTLLYPGTEAFALGASMATLILFSAFMFGLAFIMVNRRTTKPAA
Ga0310811_113349761	3300033475	Soil	GVEALRDLLYPGNPTEFPLPSSLATLVLFSALMFGLSFIMVSRRTTKPAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087517

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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