Metagenome / Metatranscriptome Family F087513

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087513
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	65 residues
Representative Sequence	MATRITFLSGQDTLVTENESEVVAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDPPAPV
Number of Associated Samples	89
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.91 %
% of genes near scaffold ends (potentially truncated)	21.82 %
% of genes from short scaffolds (< 2000 bps)	84.55 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.182 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (10.000 % of family members)
Environment Ontology (ENVO)	Unclassified (46.364 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.96% β-sheet: 22.83% Coil/Unstructured: 65.22%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF10025	DUF2267	20.91
PF13462	Thioredoxin_4	20.00
PF04679	DNA_ligase_A_C	3.64
PF02482	Ribosomal_S30AE	3.64
PF00248	Aldo_ket_red	2.73
PF10009	DUF2252	2.73
PF01965	DJ-1_PfpI	1.82
PF06772	LtrA	1.82
PF16321	Ribosom_S30AE_C	1.82
PF10944	DUF2630	1.82
PF02627	CMD	1.82
PF02895	H-kinase_dim	0.91
PF00085	Thioredoxin	0.91
PF01425	Amidase	0.91
PF07690	MFS_1	0.91
PF00166	Cpn10	0.91
PF13823	ADH_N_assoc	0.91
PF10503	Esterase_PHB	0.91
PF01565	FAD_binding_4	0.91
PF02129	Peptidase_S15	0.91
PF13811	DUF4186	0.91
PF01019	G_glu_transpept	0.91
PF13426	PAS_9	0.91
PF01434	Peptidase_M41	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	3.64
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	3.64
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.82
COG0643	Chemotaxis protein histidine kinase CheA	Signal transduction mechanisms [T]	1.82
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.82
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	1.82
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.91
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.91
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.18 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.18 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.18 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	58.18 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	58.18 %
Unclassified	root	N/A	31.82 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.55 %
Unclassified	root	N/A	31.82 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	13.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.82 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	12.73 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.73 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	1.82 %
Miltoncostaeales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales	0.91 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.91 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.91 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.73 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	1.82 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.82 %
Miltoncostaeaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae	0.91 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.91 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.91 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.73 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.82 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.82 %
Miltoncostaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea	0.91 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.91 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.91 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.73 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.82 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.91 %
Miltoncostaea oceani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	0.91 %
Nocardioides panacis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	0.91 %
Arthrobacter alpinus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter alpinus	0.91 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.73 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1.82 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	0.91 %
Miltoncostaea oceani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	0.91 %
Nocardioides panacis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	0.91 %
Arthrobacter alpinus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter alpinus	0.91 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10203403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	799	Open in IMG/M
3300003319\|soilL2_10143515	All Organisms → cellular organisms → Bacteria	1743	Open in IMG/M
3300004156\|Ga0062589_102034596	Not Available	583	Open in IMG/M
3300005093\|Ga0062594_101087437	Not Available	780	Open in IMG/M
3300005093\|Ga0062594_101800697	Not Available	645	Open in IMG/M
3300005184\|Ga0066671_10255881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1080	Open in IMG/M
3300005328\|Ga0070676_10942800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	645	Open in IMG/M
3300005335\|Ga0070666_10639237	Not Available	778	Open in IMG/M
3300005336\|Ga0070680_101687784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300005337\|Ga0070682_100658084	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300005339\|Ga0070660_100608325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	914	Open in IMG/M
3300005341\|Ga0070691_10494672	Not Available	706	Open in IMG/M
3300005354\|Ga0070675_102263495	Not Available	500	Open in IMG/M
3300005356\|Ga0070674_101284141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	652	Open in IMG/M
3300005436\|Ga0070713_101717045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	609	Open in IMG/M
3300005441\|Ga0070700_100190237	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300005459\|Ga0068867_100435377	Not Available	1114	Open in IMG/M
3300005535\|Ga0070684_100627750	Not Available	1000	Open in IMG/M
3300005577\|Ga0068857_100764712	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300005614\|Ga0068856_100456509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1299	Open in IMG/M
3300005614\|Ga0068856_100500116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1237	Open in IMG/M
3300005618\|Ga0068864_100459742	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300006176\|Ga0070765_100137180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2166	Open in IMG/M
3300006806\|Ga0079220_10265701	Not Available	1037	Open in IMG/M
3300006806\|Ga0079220_10738017	Not Available	732	Open in IMG/M
3300006853\|Ga0075420_101083242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	689	Open in IMG/M
3300006881\|Ga0068865_100023265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4055	Open in IMG/M
3300006954\|Ga0079219_11615664	Not Available	595	Open in IMG/M
3300007076\|Ga0075435_101668161	Not Available	559	Open in IMG/M
3300009094\|Ga0111539_10190696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2392	Open in IMG/M
3300009094\|Ga0111539_10721815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1160	Open in IMG/M
3300009100\|Ga0075418_12433024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	571	Open in IMG/M
3300009156\|Ga0111538_10877030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1136	Open in IMG/M
3300009156\|Ga0111538_14138101	Not Available	501	Open in IMG/M
3300009162\|Ga0075423_10084373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3313	Open in IMG/M
3300009545\|Ga0105237_10434757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1318	Open in IMG/M
3300009553\|Ga0105249_10460906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1311	Open in IMG/M
3300009553\|Ga0105249_12713753	Not Available	567	Open in IMG/M
3300009553\|Ga0105249_13152510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300010051\|Ga0133939_1004403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	19812	Open in IMG/M
3300010396\|Ga0134126_10791162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1072	Open in IMG/M
3300010397\|Ga0134124_10313500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1466	Open in IMG/M
3300010399\|Ga0134127_13124018	Not Available	541	Open in IMG/M
3300010867\|Ga0126347_1505241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	682	Open in IMG/M
3300010880\|Ga0126350_10991566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	948	Open in IMG/M
3300012908\|Ga0157286_10251825	Not Available	623	Open in IMG/M
3300012913\|Ga0157298_10279228	Not Available	581	Open in IMG/M
3300012951\|Ga0164300_10971738	Not Available	543	Open in IMG/M
3300013102\|Ga0157371_10786818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300013105\|Ga0157369_12196560	Not Available	560	Open in IMG/M
3300013306\|Ga0163162_11553596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	754	Open in IMG/M
3300013307\|Ga0157372_10209382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2259	Open in IMG/M
3300013307\|Ga0157372_12117518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → Arthrobacter alpinus	646	Open in IMG/M
3300013308\|Ga0157375_10366221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1607	Open in IMG/M
3300014325\|Ga0163163_12385770	Not Available	587	Open in IMG/M
3300014326\|Ga0157380_10860534	Not Available	929	Open in IMG/M
3300014968\|Ga0157379_10081519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2898	Open in IMG/M
3300014969\|Ga0157376_10717566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1006	Open in IMG/M
3300017792\|Ga0163161_10754715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	814	Open in IMG/M
3300017937\|Ga0187809_10379355	Not Available	535	Open in IMG/M
3300018432\|Ga0190275_10055349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	3333	Open in IMG/M
3300018432\|Ga0190275_11786584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	693	Open in IMG/M
3300018468\|Ga0066662_10971289	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300018476\|Ga0190274_11699466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	725	Open in IMG/M
3300018481\|Ga0190271_11432854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	809	Open in IMG/M
3300019356\|Ga0173481_10121414	Not Available	1037	Open in IMG/M
3300024055\|Ga0247794_10257746	Not Available	578	Open in IMG/M
3300025901\|Ga0207688_10033475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	2843	Open in IMG/M
3300025907\|Ga0207645_10571984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300025918\|Ga0207662_10078073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2015	Open in IMG/M
3300025926\|Ga0207659_10781790	Not Available	820	Open in IMG/M
3300025934\|Ga0207686_11604641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300025942\|Ga0207689_11007080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300025944\|Ga0207661_10293553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1456	Open in IMG/M
3300025960\|Ga0207651_10837311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	817	Open in IMG/M
3300025961\|Ga0207712_10202010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1577	Open in IMG/M
3300025961\|Ga0207712_11235404	Not Available	667	Open in IMG/M
3300025961\|Ga0207712_11552244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300026023\|Ga0207677_11162122	Not Available	705	Open in IMG/M
3300026035\|Ga0207703_10722223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	948	Open in IMG/M
3300026075\|Ga0207708_10194040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1618	Open in IMG/M
3300026078\|Ga0207702_10816050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	922	Open in IMG/M
3300026116\|Ga0207674_10100529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2873	Open in IMG/M
3300026118\|Ga0207675_102603686	Not Available	515	Open in IMG/M
3300027765\|Ga0209073_10158437	Not Available	840	Open in IMG/M
3300027817\|Ga0209112_10018260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2014	Open in IMG/M
3300028592\|Ga0247822_10806916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300028906\|Ga0308309_10296370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1366	Open in IMG/M
3300030336\|Ga0247826_10658724	Not Available	809	Open in IMG/M
3300030336\|Ga0247826_10872060	Not Available	709	Open in IMG/M
3300032080\|Ga0326721_10480079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	736	Open in IMG/M
3300032770\|Ga0335085_10047290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5846	Open in IMG/M
3300032770\|Ga0335085_10301038	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300032783\|Ga0335079_10233745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2027	Open in IMG/M
3300032805\|Ga0335078_10069872	All Organisms → cellular organisms → Bacteria	5135	Open in IMG/M
3300032828\|Ga0335080_10240626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1980	Open in IMG/M
3300032828\|Ga0335080_10261805	Not Available	1887	Open in IMG/M
3300032828\|Ga0335080_10471216	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300032828\|Ga0335080_10957642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	874	Open in IMG/M
3300032895\|Ga0335074_11040353	Not Available	716	Open in IMG/M
3300032896\|Ga0335075_10486062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1269	Open in IMG/M
3300033158\|Ga0335077_11594633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	621	Open in IMG/M
3300033551\|Ga0247830_10441278	Not Available	1018	Open in IMG/M
3300034268\|Ga0372943_0567657	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300034268\|Ga0372943_0899442	Not Available	588	Open in IMG/M
3300034384\|Ga0372946_0009468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4211	Open in IMG/M
3300034384\|Ga0372946_0018815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	3013	Open in IMG/M
3300034384\|Ga0372946_0047362	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300034384\|Ga0372946_0065171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1668	Open in IMG/M
3300034384\|Ga0372946_0223317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	910	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.45%
Host-Associated	Host-Associated	43.64%
Engineered	Engineered	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.55%
Plants	Host-Associated → Plants	43.64%
Aquatic	Environmental → Aquatic	0.91%
Wastewater	Engineered → Wastewater	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.09%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.64%
Freshwater	Environmental → Aquatic → Freshwater	0.91%
Roots	Host-Associated → Plants → Roots	0.91%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.64%
Loam	Environmental → Terrestrial → Soil → Loam	11.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.91%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.91%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.27%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.36%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.82%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.91%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.91%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.18%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.82%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.91%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Industrial Wastewater	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010051	Industrial wastewater microbial communities from reactors of effluent treatment plant in South Killingholme, Immingham, England. Combined Assembly of Gp0151195, Gp0151196	Engineered	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_102034032	3300001867	Forest Soil	MATRIVFLNGQETTVTENEDEVVQAVRRDHPNPVKLEGVDGIVVFVNWNHITSIAPQPEPPLVS*
soilL2_101435152	3300003319	Sugarcane Root And Bulk Soil	MATRITFLSGQDTLVTENESEVVAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDPPAPV*
Ga0062589_1020345961	3300004156	Soil	MATRITFLSGEDTLVTENESEVVAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDPPAPV*
Ga0062594_1010874371	3300005093	Soil	RLGAAHERPTSRGMPTRIVFLGGQETTVNENQDDVVAAVRRDDPNPVKLEGTDGLVLHVNWSHVTLLAPAPEPRLPG*
Ga0062594_1018006971	3300005093	Soil	MATRITFLSGQDTLVTENEAEVVAAVRRDHPNPVKLEGTDGVVQFVSWSHVTLIAPAVDPPAPV*
Ga0066671_102558813	3300005184	Soil	MATRIVFLGGQETTVTESEEEVVKAVGRDHPNPVKLEGLDGLVVYVNWNHITSIAPAPEPRPA*
Ga0070676_109428001	3300005328	Miscanthus Rhizosphere	MATRITFLSGEDTLVTENESEVAAAVRRDHPNPVKLEGTDGGVQFVSWSHVTLIAPAVDPPAPV*
Ga0070666_106392371	3300005335	Switchgrass Rhizosphere	RITFHSGQDTLVTENESEVVAAVRRDHPNPVKLKGTDGVVQFVNWSHVTLIAPAVDPPAPV*
Ga0070680_1016877842	3300005336	Corn Rhizosphere	MATRITFLSGEDTLVTENESEVAAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDPPAPV*
Ga0070682_1006580842	3300005337	Corn Rhizosphere	MATRITFLSGEDTLVTENESEVAAAVRRDHPNPVKLEGTDGVVQFVSWSHVTLIAPAVDPPAPV*
Ga0070660_1006083252	3300005339	Corn Rhizosphere	MATRITFLSGEDTLVTENESEVAAAVRRDHPNPVKLEGTDGVVRFVNWSHVTLIAPAVDPPAPV*
Ga0070691_104946721	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MAQHEPVRQIFARLGTVHGRPTSRGMPTRIVFLGGQETTVNENQDDVVAAVRRDDPNPVKLEGTDGLVLHVNWSHVTLVAPVPEPRVPG*
Ga0070675_1022634952	3300005354	Miscanthus Rhizosphere	PTSRGMPTRIVFLGGQETTVNENQDDVVAAVRRDDPNPVKLEGTDGLVLHVNWSHVTLLAPAPEPRLPG*
Ga0070674_1012841412	3300005356	Miscanthus Rhizosphere	MFARLGAEPGRPTSKGMPTRIVFLGGQETTVNENQDDVVAAVRRDDPNPVKLEGTDGLVLHVNWSHVTLLAPAPEPRLPG*
Ga0070713_1017170451	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MATRILFLSGQEMAVTETEDAVVKAIRRDHPNPVKLEGLDGLVLYVNWSHVTSIGPQPEPRPAV*
Ga0070700_1001902373	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	PAMAMRITFLSGQDTLGIENESEVVAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDPPAPV*
Ga0068867_1004353775	3300005459	Miscanthus Rhizosphere	TVNENQDDVVAAVRRDDPNPVKLEGTDGLVLHVNWSHVTLLAPAPEPRLPG*
Ga0070684_1006277501	3300005535	Corn Rhizosphere	IVFLGGQETTVNENQDDVVAAVRRDDPNPVKLEGTDGLVLHVNWSHVTLLAPAPEPRLPG
Ga0068857_1007647123	3300005577	Corn Rhizosphere	MATRITFLSGQDTLVTENESEVVAAVRRDHPNPVKLEGTDGVVQFVSWSHVTLIAPAVDPPAPV*
Ga0068856_1004565092	3300005614	Corn Rhizosphere	MATRITFLSGQDTLVTENEAEVVAAAAATTPPVKLEGTDGVVQFVNWSHVTLIAPAVDPPAPV*
Ga0068856_1005001162	3300005614	Corn Rhizosphere	MATRITFLSGQDTLVTENESEVVAAVRRDHPNPVKLEGTHGVAQFVNRSHVTLIAPAVDPPPPV*
Ga0068864_1004597423	3300005618	Switchgrass Rhizosphere	DTLVTENESEVVAAVRRDHPNPVKLEGTDGVVQFVSWSHVTLIAPAVDPPAPV*
Ga0070765_1001371802	3300006176	Soil	MATRSIFRNGQETAVTETEDEVVQAVRRDHPNPVKLEGIDGVVLYVNWAHITSIAPALARA*
Ga0079220_102657013	3300006806	Agricultural Soil	MATRITFHSGQDTLVTENEDEVVAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDPPAPV*
Ga0079220_107380172	3300006806	Agricultural Soil	MSARLGAAHERPTSRGMPTRIVFLGGQEATVNENQDDVVAAVRRDDPNPVKLEGTDGLVLYVNWSHVTLIAPAPEPRLPG*
Ga0075420_1010832421	3300006853	Populus Rhizosphere	MATRITFLSGQDTLVTENEAEVVAAIRRDHPNPVKLQGADGVVRFVTWSHVTLIAPAVDPPAPV*
Ga0068865_1000232656	3300006881	Miscanthus Rhizosphere	MAMRITFLSGQDTLGIENESEVVAAVRRDHPNPVKLEGTDGVVQFVSWSHVTLIAPAVDPPAPV*
Ga0079219_116156641	3300006954	Agricultural Soil	MATRSIFRNGQETAVTETEDEVVQAVRRDHPDPVKLEGIDGVVLYVNWAHITSIGPGPRPCP
Ga0075435_1016681611	3300007076	Populus Rhizosphere	MATRITFLSGQDTLVTENEAEVVAAVRRDHPNPVKLEGPDGVVQFVSWSHVTLIAPAVDPPAPV*
Ga0111539_101906963	3300009094	Populus Rhizosphere	MATRITFLSGEDMLVTENESEVAAAVRRDHPNPVKLEGTDSVVQFVIWSHVTLIAPAVDPPAPV*
Ga0111539_107218152	3300009094	Populus Rhizosphere	MPTRIVFLGGQEATVNENQDDVVAAVRRDDPNPVKLEGTDGLVLYVNWSHVTLIAPAPEPRLPG*
Ga0075418_124330242	3300009100	Populus Rhizosphere	MPTRIVFLGGHETTVNESQDDVVAAVRRDDPNPVKLEGTDGLVLHVNWSHVTLIAPAPEPRPPG*
Ga0111538_108770302	3300009156	Populus Rhizosphere	MATRITFISGEDTLVTENESEVVTAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDPPAPV*
Ga0111538_141381011	3300009156	Populus Rhizosphere	TLVTENESEVAAAVRRDHPNPVKLEGTDSVVQFVIRSHVTLIAPAVDPPAPV*
Ga0075423_100843733	3300009162	Populus Rhizosphere	MATRITFLSGEDTLVTENESEIAAAVRRDHPNPVKLEGTDGVVQFVSWSHVTLIAPAVDPPAPV*
Ga0105237_104347572	3300009545	Corn Rhizosphere	MATRITFLSGEDTLVTENESEVAAAVRRDRPNPVTLEGTDGGVQFVSWSDVTLIAPAVDPPAPV*
Ga0105249_104609062	3300009553	Switchgrass Rhizosphere	MATRITFLSGQDTLVTENEAEVMAAIRRDHPNPVKLEGTDGVVRFVNWSHVTLIAPAVDPPAPV*
Ga0105249_127137533	3300009553	Switchgrass Rhizosphere	MPTRIVFLGGQETTVNENQDDVVAAVRRDDPNPVKLEGTDGLVLHVNWSHVTLLAPAPEPRLPG*
Ga0105249_131525102	3300009553	Switchgrass Rhizosphere	FAGGQEAAVSENQDQVVSAVRRDHPNPVKLEGVDGLVLYVNWLHVALIAPRPEPAI*
Ga0133939_10044034	3300010051	Industrial Wastewater	MPTHILFINGQDTTVTETEEEVVAAVRRDHPNPVKLEGLDGLVAYVNWAHVSLIEPAPAPAPVP*
Ga0134126_107911622	3300010396	Terrestrial Soil	MATRITFLSGQDTLVTENEAEVVAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDPPAPV*
Ga0134124_103135003	3300010397	Terrestrial Soil	MATRITFLSGEDTLVTENESEVAAAVRRDHPNPVKLEGTDGVVQFVNWNHVTLIAPAIEPPAPV*
Ga0134127_131240182	3300010399	Terrestrial Soil	MAMRITFLSGQDTLGIENESEVVAAVRRDHPNPVKLEGTDGVVRFGNWSHVTLIAPAVDPPAPV*
Ga0126347_15052411	3300010867	Boreal Forest Soil	MDAGSWKHLARERPVRMATQIVFLNGQQTTVTETEDQVVQAVRRDHPNPVRLEGADGIVVFVNWNLITSIAPQPEPPLVS*
Ga0126350_109915661	3300010880	Boreal Forest Soil	MDAGSWKHLARERPVRMATQIVFLNGQQTTVTETEDQVVQAVRRDHPNPVRLEGVDGIVVFVNWKHITSIAPQPEPPLVS*
Ga0157286_102518252	3300012908	Soil	MATRITFLSGLDTLVTENESEVVAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDPPAPV*
Ga0157298_102792283	3300012913	Soil	ITFLSGEDTLVTENESEVVAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDPPAPV
Ga0164300_109717381	3300012951	Soil	EAPAMATRITFLSGEDTLVTENESEVAAAVRRDHRNPVKLEGTDGVVQLVSWSHVTLIAPAVDPPAPV*
Ga0157371_107868182	3300013102	Corn Rhizosphere	MATRITFLSGQDTLVTENESEVVAAVRRDHPNPVKLEGTDGVVQSVDWSHVTLIAPALDPPAPV*
Ga0157369_121965602	3300013105	Corn Rhizosphere	FLSGEDTLVTENESEVAAAVRRDHPNPVKLEGTDGVVQFVSWSHVTLIAPAVDPPAPV*
Ga0163162_115535962	3300013306	Switchgrass Rhizosphere	MATRITFLSGQDTLVTENEAEVMAAVRRDHPIPVKLEGTDGVVRFGNWSHVTLIAPAVDPPARV*
Ga0157372_102093824	3300013307	Corn Rhizosphere	MATRITFLSVEDTLVTENESEVAAAVRRDHPNPVKLEGTDGVVQFVSWSHVTLIAPAVDPPAPV*
Ga0157372_121175181	3300013307	Corn Rhizosphere	MATRITFLSGQDTLVTENEAEVVAAVRRDHPNPVKLEGTHGVAQFVNRSHVTLIAPAVDPPPPV*
Ga0157375_103662212	3300013308	Miscanthus Rhizosphere	MATRITFLSGEDTLVTENESEVAAAVRRDHPNPVTLEGTDGGVQFVSWSHVTLIAPAADPPAPV*
Ga0163163_123857701	3300014325	Switchgrass Rhizosphere	MATRITFLSGEDTLVTENESEVAAAVRRDHPNPVTLEGTDGAVQFVSWSHLTLIAPAADPPAPV*
Ga0157380_108605341	3300014326	Switchgrass Rhizosphere	MATRITFLSGEDTLVTENESEVAAAVRRDHPNPVKLKGTDGVVQFVNWSHVTLIAPAVDPPAPV*
Ga0157379_100815194	3300014968	Switchgrass Rhizosphere	MATRITFLSGQDTLVTANESEVVAAVRRDHPNPVKLEGTDGVVQFVSWSHVTLIAPAVDPPAPV*
Ga0157376_107175661	3300014969	Miscanthus Rhizosphere	MATRITFLSGEDTLVTENESEVAAAVRRDHPNPVKLEGTDGVVQFVSWSHVTLIAPA
Ga0163161_107547151	3300017792	Switchgrass Rhizosphere	MATRITFLSGQDTLVTENEAEVMAAVRRDHPNPVKLEGTDGVVRFGNWSHVTLIAPAVDPPAPV
Ga0187809_103793552	3300017937	Freshwater Sediment	MATRIVFLNGQETTVTETEDQVVQAVKRDHPNPVKLEGADGIVVFVNWNHITSIAPHPEPPLVT
Ga0190275_100553496	3300018432	Soil	MPTRIVFLGGQETTVNENQDDVVAAVRRDDPNPVKLEGTDGFVLHVNWSHVTLIAPAPETRLPG
Ga0190275_117865842	3300018432	Soil	MATRITFLSGQDTLVTENESEVVAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDPPAPV
Ga0066662_109712892	3300018468	Grasslands Soil	MATRIVFLGGQETTVTESEEEVVKAVGRDHPNPVKLEGLDGLVVYVNWNHITSIAPAPEPRPA
Ga0190274_116994662	3300018476	Soil	MPTRIVFLGGQETTVNENQDDVVAAVRRDDPNPVKLEGTDGLVLHVNWSHVTLIAPAPEPRLPG
Ga0190271_114328542	3300018481	Soil	MATRITFLSGQDMLVTENESEVVAAVRRDHPNPVKLEGTDGVVQFVNWSPVTLIAPAADPTAPV
Ga0173481_101214143	3300019356	Soil	MATRITFLSGEDTLVTENESEVVAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDPPAPV
Ga0247794_102577461	3300024055	Soil	MATRITFLSGEDTLVTENESEVVAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDPPSPV
Ga0207688_100334755	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	LSGEDTLVTENESEVAAAVRRDHPNPVTLEGTDGGVQFVSWSHVTLIAPAADPPAPV
Ga0207645_105719842	3300025907	Miscanthus Rhizosphere	MATRITFLSGEDTLVTENESEVAAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDP
Ga0207662_100780733	3300025918	Switchgrass Rhizosphere	MATRITFLSGEDTLVTENESEVVAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPTVDPPAPV
Ga0207659_107817902	3300025926	Miscanthus Rhizosphere	MLGAAYGRPTSRGMPTRIVFLGGQETTVNENQDDVVAAVRRDDPNPVKLEGTDGLVLHVNWSHVTLLAPAPEPRLPG
Ga0207686_116046411	3300025934	Miscanthus Rhizosphere	MATRITFLSGEDTLVTENESEVAAAVRRDHPNPVKLEGTDGVVQFVSWSHVTLIAPAVD
Ga0207689_110070802	3300025942	Miscanthus Rhizosphere	MATRITFLSGEDTLVTENESDVAAAVRRDHPNPVKLEGTDGGVQFVSWSHVTLIAPAVDPPAPV
Ga0207661_102935533	3300025944	Corn Rhizosphere	MATRITFLSGQDTLVTENESEVVAAVRRDHPNPVKLEGTDGVVQFVSWSHVTLIAPAVDPPAPV
Ga0207651_108373112	3300025960	Switchgrass Rhizosphere	MATRITFLSGEDTLVTENESEVAAAVRRDHPNPVTLEGTDGGVQFVSWSHVTLIAPAADPPAPV
Ga0207712_102020103	3300025961	Switchgrass Rhizosphere	MATRITFLSGEDTLVTENESEVAAAVRRDHPNPVKLEGTDGVVRFVNWSHVTLIAPAVDPPAPV
Ga0207712_112354043	3300025961	Switchgrass Rhizosphere	FARLGAAPGRPTSKGMPTRIVFLGGQETTVNENQDDVVAAVRRDDPNPVKLEGTDGLVLHVNWSHVTLLAPAPEPRLPG
Ga0207712_115522442	3300025961	Switchgrass Rhizosphere	TAGSGQEAAVSENQDQVVSAVRRDHPNPVKLEGVDGLVLYVNWLHVALIAPRPEPAI
Ga0207677_111621222	3300026023	Miscanthus Rhizosphere	MATRITFLSGQDTLVTANESEVVAAVRRDHPNPVKLEGTHGVAQFVNRSHVTLIAPAVDPPPPV
Ga0207703_107222231	3300026035	Switchgrass Rhizosphere	MATRITFLSGEDTLVTENESEVAAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDPPAPV
Ga0207708_101940403	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MATRITFLSGEDTLVTENESEIAAAVRRDHPNPVKLEGTDGVVQFVSWSHVTLIAPAVDPPAPV
Ga0207702_108160502	3300026078	Corn Rhizosphere	MATRITFLSGQDTLVTENESEVVAAVRRDHPNPVKLEGTHGVAQFVNRSHVTLIAPAVDPPPPV
Ga0207674_101005293	3300026116	Corn Rhizosphere	MATRITFLSGEDTLATENESEVAAAVRRDHPNPVKLEGTDGVVQFVSWSHVTLIAPAVDPPAPV
Ga0207675_1026036862	3300026118	Switchgrass Rhizosphere	PGRPTSKGMPTRIVFLGGQETTVNENQDDVVAAVRRDDPNPVKLEGTDGLVLHVNWSHVTLLAPAPEPRLPG
Ga0209073_101584373	3300027765	Agricultural Soil	MATRITFHSGQDTLVTENEDEVVAAVRRDHPNPVKLEGTDGVVQFVNWSHVTLIAPAVDPPAPV
Ga0209112_100182602	3300027817	Forest Soil	MATRIVFLNGQETTVTENEDEVVQAVRRDHPNPVKLEGVDGIVVFVNWNHITSIAPQPEAPLVS
Ga0247822_108069161	3300028592	Soil	MATRIVFAGGQEAAVSENQDQVVSAVRRDHPNPVKLEGVDGLVLYVNWSHVSLIAPRPEPAI
Ga0308309_102963702	3300028906	Soil	MATRSIFRNGQETAVTETEDEVVQAVRRDHPNPVKLEGIDGVVLYVNWAHITSIAPALAR
Ga0247826_106587242	3300030336	Soil	MATHILFINGQDTTVTETEEEVVAAVRRDHPNPVKLEGTDGLVEYVNWAHGSLIEPAPAPAPVP
Ga0247826_108720602	3300030336	Soil	VHERPTSRCMPTRIVFLGGQETTVSENQDDVVAAVRRDDPNPVKLEGTDGLVLHVNWSHVTLIAPAPEPRLPG
Ga0326721_104800792	3300032080	Soil	MPARLGAAHERPTSKGMPTRIVFLGGHETTVNENQDDVVAAVRRDDPNPVKLEGTDGLVLHVNWSHVTLIAPAPEPRLPG
Ga0335085_100472904	3300032770	Soil	MATRIVFLNGQETAVTGTEDEVVQVVRRGHSDQVKLEGIDGVVLYVIWARITSIDPRPSLVP
Ga0335085_103010382	3300032770	Soil	MATRIVFLGGHETTVTETEEEVVQAVRRDHPNPVKLEGLDGLVVYVNWSHITSIGPAPEPRPV
Ga0335079_102337452	3300032783	Soil	MATRIVFLNGQVTTVTETEDQVVEAVRRDHPNSVKLEGVDGIVMFVNWSHITSIAPHPEPPLVS
Ga0335078_100698723	3300032805	Soil	MATRIVFLGGQETTVTETEEEVVQAVRRDHPNPVKLEGLDGLVVYVNWTHITSIAPVPEPRPA
Ga0335080_102406264	3300032828	Soil	NVLAPERLVGMATRIVFLNGQVTTVTETEDQVVEAVRRDHPNSVKLEGVDGIVMFVNWSHVTSIAPHPEPPLVG
Ga0335080_102618052	3300032828	Soil	MAMRIVFLNGQETTVSETEDQVVEAGRRDHPNPVKLERVDGVVLHVIWAHITSLGPRPLPVP
Ga0335080_104712162	3300032828	Soil	MATRIVFLGGHETTVTETEEEVVRAVRRDHPNPVKLEGLDGLVVYVNWSHISSIGPAPEPRPA
Ga0335080_109576421	3300032828	Soil	MATHILFANGQGTTVTETEEEVVTAVRRDHPNPVKLEGTDGLVEYVNWAHVSLIQPAPAAPPPDVAKTPKG
Ga0335074_110403532	3300032895	Soil	MATRIVFLNGQETMVTETEDQVVQAVRRDHPNPVKLEGVDGIVMFVNWSHITSIAPHPEPPLVS
Ga0335075_104860622	3300032896	Soil	MATRIVFLNGQETMVTETEDEVVQAVRRDHPNPVKLEGVDGIVMFVNWSHITSIAPHPEPPLVS
Ga0335077_115946331	3300033158	Soil	ERLVSMAMRIVFLNGQETTVSETEDQVVEAGRRDHPNPVKLEGVDGIVMFVNWSHVTSIAPHPEPPLVG
Ga0247830_104412783	3300033551	Soil	MATRITFLSGQDTLVTENEAEVVAAVRRDHPNPVKLEGTDGVVQFVSWSHVTLIAPAVDPPAPV
Ga0372943_0567657_369_563	3300034268	Soil	MATRIQFANGRQTDVTETEADVVRSVRRDHPNPVKLEGTDGVVVYVNWNHVTMIEPAPEPAVPA
Ga0372943_0899442_102_290	3300034268	Soil	MATRIVFAGGQETAVSENQDQVVSAVRRDHPNPVKLEGVDGVVLYVNWAHVTLIAPRPEPAI
Ga0372946_0009468_2028_2222	3300034384	Soil	MATRILFLSGQETVVVESEADVVAAVRRDHPNPVKLEGTDGVVQYVNWGHVTLIGPQPDPAIPA
Ga0372946_0018815_2680_2874	3300034384	Soil	MPTRIVFLGGQETTVAENEDDVVAAVRRDHPNPVKLEGTDGLVLFMNWTHVTLIAPGPESRPPV
Ga0372946_0047362_1139_1330	3300034384	Soil	MATRIMFLNGHETTVAESEADVVAAVRRDHPNPVKLEGTDGVVVHVNWTHVTLMAPSPDPTPT
Ga0372946_0065171_691_885	3300034384	Soil	MATQILFLNDHETTVAENEDEVVAAVRRDHPNPVKLEGMDGLVLYVNWAQVTMIAPKQDPAVPA
Ga0372946_0223317_290_484	3300034384	Soil	MATRIQFASGNETAVTETEAEVVSAVRRDHPNPVKLEGTDGLVLYINWNHVTLIAPAPEPALRV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087513

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences