Metagenome Family F087497

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087497
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	70 residues
Representative Sequence	MSKFTRRELAAALSTSAVLLARPQAPTLPQALPANAEDELKASRAQLRDNADQLDKFPLPMAAEPATTFKP
Number of Associated Samples	72
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.00 %
% of genes near scaffold ends (potentially truncated)	20.00 %
% of genes from short scaffolds (< 2000 bps)	82.73 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.364 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (14.546 % of family members)
Environment Ontology (ENVO)	Unclassified (27.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.636 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 34.34% β-sheet: 0.00% Coil/Unstructured: 65.66%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01425	Amidase	50.91
PF08501	Shikimate_dh_N	14.55
PF01488	Shikimate_DH	7.27
PF03118	RNA_pol_A_CTD	0.91
PF13421	Band_7_1	0.91
PF13432	TPR_16	0.91
PF07676	PD40	0.91
PF00691	OmpA	0.91
PF13450	NAD_binding_8	0.91
PF00203	Ribosomal_S19	0.91
PF14378	PAP2_3	0.91
PF12704	MacB_PCD	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	50.91
COG0169	Shikimate 5-dehydrogenase	Amino acid transport and metabolism [E]	14.55
COG0185	Ribosomal protein S19	Translation, ribosomal structure and biogenesis [J]	0.91
COG0202	DNA-directed RNA polymerase, alpha subunit/40 kD subunit	Transcription [K]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.36 %
Unclassified	root	N/A	3.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.36 %
Unclassified	root	N/A	3.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.36 %
Unclassified	root	N/A	3.64 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	69.09 %
Unclassified	root	N/A	3.64 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	40.00 %
Unclassified	root	N/A	3.64 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	35.45 %
Unclassified	root	N/A	3.64 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	14.55 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	3.64 %
Unclassified	root	N/A	3.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	14.55 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	3.64 %
Unclassified	root	N/A	3.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	13.64 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	3.64 %
Unclassified	root	N/A	3.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10272749	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300004091\|Ga0062387_100337800	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300004092\|Ga0062389_100026465	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4228	Open in IMG/M
3300004092\|Ga0062389_100245323	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300004092\|Ga0062389_100565577	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1296	Open in IMG/M
3300004092\|Ga0062389_100647834	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300004092\|Ga0062389_100778285	All Organisms → cellular organisms → Bacteria → Acidobacteria	1135	Open in IMG/M
3300004092\|Ga0062389_101651618	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300004092\|Ga0062389_101878691	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300004092\|Ga0062389_103748620	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	570	Open in IMG/M
3300004152\|Ga0062386_100108497	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2138	Open in IMG/M
3300004152\|Ga0062386_101141411	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005537\|Ga0070730_10532126	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300005538\|Ga0070731_10330302	All Organisms → cellular organisms → Bacteria → Acidobacteria	1013	Open in IMG/M
3300005538\|Ga0070731_10446112	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300005610\|Ga0070763_10967234	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005712\|Ga0070764_10330456	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	887	Open in IMG/M
3300005712\|Ga0070764_10418534	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300005921\|Ga0070766_10160833	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300005921\|Ga0070766_10327836	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300006028\|Ga0070717_10003142	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11801	Open in IMG/M
3300006176\|Ga0070765_100483041	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300006176\|Ga0070765_100576201	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1061	Open in IMG/M
3300006176\|Ga0070765_100867972	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300006176\|Ga0070765_101219158	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300006176\|Ga0070765_101735516	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300009522\|Ga0116218_1416011	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300009683\|Ga0116224_10589754	Not Available	531	Open in IMG/M
3300010339\|Ga0074046_10659634	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300010379\|Ga0136449_101782022	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300010379\|Ga0136449_103798619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	568	Open in IMG/M
3300014162\|Ga0181538_10708073	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300014167\|Ga0181528_10112737	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1476	Open in IMG/M
3300014169\|Ga0181531_10432532	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300014489\|Ga0182018_10672790	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300014495\|Ga0182015_10142054	All Organisms → cellular organisms → Bacteria → Acidobacteria	1637	Open in IMG/M
3300014501\|Ga0182024_10003643	All Organisms → cellular organisms → Bacteria → Acidobacteria	36413	Open in IMG/M
3300014501\|Ga0182024_10172382	All Organisms → cellular organisms → Bacteria → Acidobacteria	3000	Open in IMG/M
3300014501\|Ga0182024_11976767	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300014654\|Ga0181525_10075359	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1883	Open in IMG/M
3300014654\|Ga0181525_10306644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	867	Open in IMG/M
3300014654\|Ga0181525_10321881	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	845	Open in IMG/M
3300014654\|Ga0181525_10539636	Not Available	647	Open in IMG/M
3300014657\|Ga0181522_10319921	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300017925\|Ga0187856_1000326	All Organisms → cellular organisms → Bacteria → Acidobacteria	44667	Open in IMG/M
3300017988\|Ga0181520_10638926	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300018012\|Ga0187810_10287645	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300018034\|Ga0187863_10107050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1566	Open in IMG/M
3300018046\|Ga0187851_10095213	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1857	Open in IMG/M
3300020583\|Ga0210401_10083278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3010	Open in IMG/M
3300020583\|Ga0210401_10198436	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1864	Open in IMG/M
3300021168\|Ga0210406_10394367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1110	Open in IMG/M
3300021180\|Ga0210396_10779101	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	822	Open in IMG/M
3300021181\|Ga0210388_10201709	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1741	Open in IMG/M
3300021181\|Ga0210388_10222840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1652	Open in IMG/M
3300021181\|Ga0210388_10497542	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1070	Open in IMG/M
3300021181\|Ga0210388_10676186	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	900	Open in IMG/M
3300021181\|Ga0210388_10708404	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	876	Open in IMG/M
3300021388\|Ga0213875_10055613	All Organisms → cellular organisms → Bacteria	1853	Open in IMG/M
3300021402\|Ga0210385_10413095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1015	Open in IMG/M
3300021420\|Ga0210394_10084726	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2737	Open in IMG/M
3300021433\|Ga0210391_10361205	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1140	Open in IMG/M
3300021433\|Ga0210391_11230717	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300021475\|Ga0210392_10275332	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1200	Open in IMG/M
3300021477\|Ga0210398_10268530	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300027609\|Ga0209221_1107155	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300027696\|Ga0208696_1261541	Not Available	535	Open in IMG/M
3300027853\|Ga0209274_10194327	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300027854\|Ga0209517_10108480	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1852	Open in IMG/M
3300027854\|Ga0209517_10685198	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300027857\|Ga0209166_10354958	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300027867\|Ga0209167_10794249	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300027869\|Ga0209579_10525526	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300027879\|Ga0209169_10014066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4402	Open in IMG/M
3300027889\|Ga0209380_10262229	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300027905\|Ga0209415_10224373	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1733	Open in IMG/M
3300027905\|Ga0209415_10711263	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300027908\|Ga0209006_10016791	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	6635	Open in IMG/M
3300027908\|Ga0209006_11474722	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300028747\|Ga0302219_10307812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	617	Open in IMG/M
3300028798\|Ga0302222_10162651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	878	Open in IMG/M
3300028906\|Ga0308309_10056906	All Organisms → cellular organisms → Bacteria → Acidobacteria	2850	Open in IMG/M
3300029943\|Ga0311340_10905818	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300029999\|Ga0311339_10488120	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1257	Open in IMG/M
3300029999\|Ga0311339_10557052	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300030007\|Ga0311338_11235245	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300030053\|Ga0302177_10036929	All Organisms → cellular organisms → Bacteria → Acidobacteria	3027	Open in IMG/M
3300030053\|Ga0302177_10056380	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2366	Open in IMG/M
3300030503\|Ga0311370_12457852	Not Available	502	Open in IMG/M
3300031057\|Ga0170834_107721138	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300031128\|Ga0170823_14983313	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300031231\|Ga0170824_103046712	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300031234\|Ga0302325_10883692	All Organisms → cellular organisms → Bacteria → Acidobacteria	1244	Open in IMG/M
3300031234\|Ga0302325_11579306	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	839	Open in IMG/M
3300031234\|Ga0302325_12517997	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300031236\|Ga0302324_100190824	All Organisms → cellular organisms → Bacteria → Acidobacteria	3286	Open in IMG/M
3300031236\|Ga0302324_101458424	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	892	Open in IMG/M
3300031524\|Ga0302320_11299328	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300031525\|Ga0302326_11366973	All Organisms → cellular organisms → Bacteria → Acidobacteria	959	Open in IMG/M
3300031525\|Ga0302326_12435874	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300031708\|Ga0310686_105375260	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	12407	Open in IMG/M
3300031708\|Ga0310686_113282753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4899	Open in IMG/M
3300031708\|Ga0310686_115144240	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1215	Open in IMG/M
3300031754\|Ga0307475_11479340	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300032174\|Ga0307470_10043089	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2252	Open in IMG/M
3300032782\|Ga0335082_10334798	All Organisms → cellular organisms → Bacteria → Acidobacteria	1383	Open in IMG/M
3300032805\|Ga0335078_10236439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2505	Open in IMG/M
3300032895\|Ga0335074_10022762	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	8832	Open in IMG/M
3300032955\|Ga0335076_10320052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1439	Open in IMG/M
3300033134\|Ga0335073_10464336	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1458	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.09%
Host-Associated	Host-Associated	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.27%
Aquatic	Environmental → Aquatic	21.82%
Plants	Host-Associated → Plants	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.82%
Freshwater	Environmental → Aquatic → Freshwater	21.82%
Peat	Environmental → Terrestrial → Peat	15.45%
Roots	Host-Associated → Plants → Roots	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.82%
Loam	Environmental → Terrestrial → Soil → Loam	16.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.00%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.45%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.45%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.91%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.64%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	12.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	10.00%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.09%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	8.18%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.55%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.91%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.91%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102727491	3300000567	Peatlands Soil	MNRFTRRELAAVVSTSAVLLARPQAQPATQPLPANPAEELQASQAQLRDNAGQLDKFPLPMSVEPATTFKA*
Ga0062387_1003378002	3300004091	Bog Forest Soil	MSKFTRRELAAALSTSAVLLARPQAQPPNPPAVNPEDELTAARTQLRDNASQLDKFPLPMAAEPATTFKP*
Ga0062389_1000264653	3300004092	Bog Forest Soil	MSKFTRRELAAALSTSAVLLARPQVQPPAQASPASPPASPDDELKAVRAQLRDNADQLDKFPLPMAAEPATIFKP*
Ga0062389_1002453232	3300004092	Bog Forest Soil	MGKLTRRELAATLATSAVLLARPQAQPPAQPLPANPDEELKASRAQLQDNAGQLDKFPLPMSTEPATTFRP*
Ga0062389_1005655772	3300004092	Bog Forest Soil	MNKFTRRELAAALSTSAVLLAQPPAQTPTQPLPANPAEELQATQAQLRDNAGQLDKFPLPMSTEPATVFKP*
Ga0062389_1006478341	3300004092	Bog Forest Soil	MSKFTRRELAAALSTSAVLLARPQAPTQALPATPDDELKASRAQLRDNVDQMDKFPLLMAAEPATIFKP*
Ga0062389_1007782851	3300004092	Bog Forest Soil	MSKFTRRELAAALSTSAVLLARPQGQPAAQPLPATPDDELKGSRAQLRDNADQLDKFPLPMAAEPATTFKP*
Ga0062389_1016516182	3300004092	Bog Forest Soil	MSKLTRRQLAAALSTSAVLLGQAQPQASPAASADDELASSRAQLHDNADQLDKFPLPMAAEPATTFKP*
Ga0062389_1018786912	3300004092	Bog Forest Soil	MNRFTRRELAAALATSAVLLASPQGQTPPPLPANPDEELKAARSRLRDNSDQLDKFPLPMAAEPATTFKP*
Ga0062389_1037486201	3300004092	Bog Forest Soil	MSKFTRRELAAALSTSAVLLARPQVQAPAPALPANPDEELKASRAQLLDNAGQLDKVPLAMAAEPATIFKP*
Ga0062386_1001084972	3300004152	Bog Forest Soil	MTKFTRRELAAVVSTSAVLLAQPQAQPLPENPGDELKAVRAQLRETADQLDKFPLPMSTEPATTFKA*
Ga0062386_1011414111	3300004152	Bog Forest Soil	MSKFTRRELAAALSTSAVLLARPQGQPAARPLPATPDDELKGSQAQLRANADQLDKFP
Ga0070730_105321261	3300005537	Surface Soil	LLARSCTTLESMNKFTRRELAVALSTSTVLLARPQSQPQAQPLPANPDEELKASRAQLHDNAEQLDKFPLPMSAEPATIFKP*
Ga0070731_103303022	3300005538	Surface Soil	LSTSAVLLARPQTPTPTQALPANPDEELRASRAQLRDNADQMDKFPLPMTAEPATIFKP*
Ga0070731_104461122	3300005538	Surface Soil	MIRFTRRELAATLSTSAVLLARPQAQPPSQPIPESPQDELKASRAQLQTNAEQLDKFPLSMSAEPATTFKP*
Ga0070763_109672342	3300005610	Soil	MSKFTRRELAAALSTSAVLLARPQVQAPAPALPANPDEELKASRAQLLDNAGQLDKVPLPMSAEP
Ga0070764_103304562	3300005712	Soil	MSKFTRRELAAALSTSAVLLARPQVQAPAPALPANPDEELKASRAQLLDNAGQLDKVPLPMSAEPATIFKP*
Ga0070764_104185342	3300005712	Soil	MGTLTRRELAAALSTSAVLLAQPPGQALPANPDEELKAARAQLQDSAGQLDKFQLPMSTEPAATFKP*
Ga0070766_101608331	3300005921	Soil	MSKFTRRELAAALSTSAVLLARPQVQPPAPALPANPDEELKASRAQLLDNAGQLDKVPLAMAAEPATIFK
Ga0070766_103278362	3300005921	Soil	MNKFTRRELAAAISTSAVLLAQPPAQTQAQPPAQPLPANPAEELQATQAQLHDNAGQLDKFPLPMSTEPATIFKP*
Ga0070717_100031422	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSKFTRRELAVALSTSAVLLAQPQAQPAPQALPANADEELKSSRAQLRDNADQLDKFPLPMPAEPATTFKP*
Ga0070765_1004830412	3300006176	Soil	MSKFTRRELAAALSTSAVLLARPQAAPPPALPANPEEELKAAQAQLRDNAAQLDKFPLPMDAEPATMFKP*
Ga0070765_1005762012	3300006176	Soil	MSKFTRRELAAALSTSAVLLARPQVQAPAPALPANPDEELKASRAQLLDNAGQLDKVPLPMSAEPATIFRP*
Ga0070765_1008679722	3300006176	Soil	MSKFTRRELAAALSTSAVLLAQAPPQSQDLPANPDQDLKAVQAQLRGNADQLDKFPLPMATEPATMFRP*
Ga0070765_1012191582	3300006176	Soil	MNKFTRRELAAGLATSAVLLGQPAPPPLPATPDEELKAVREQLRDAADQLDKFPLPMSTEPATTFHP*
Ga0070765_1017355162	3300006176	Soil	MNKFTRRELAAGLSTAAVLLARPQSQLQPPANPAEELTASRTQLRDSADQMDKFPLPMSTEPATTFKP*
Ga0116218_14160112	3300009522	Peatlands Soil	ELAAALSTSAVLLAQPPAQIQAQPPTQQPLPANPAEELQAAQAQLRDNAGQLEKFPLPMSTEPATTFKP*
Ga0116224_105897541	3300009683	Peatlands Soil	MNKFTRRELAAALSTSAVLLAQPPAQTQAQPPTQQPLPANPAEELQAAQAQLRDNAGQLEKFPLPMSTEPATTFKP*
Ga0074046_106596341	3300010339	Bog Forest Soil	MTKFTRRELAAALSTSAVLLARPQAQPQPIPSNPDDELKAVRAQLRESADQLDKFPLPMSTEPATTFRA*
Ga0136449_1017820222	3300010379	Peatlands Soil	MSRLTRRELAAALSTSAVLLARPQTPGPTQALPTSPDEELKASRAQIRDNADQMDRFPLPMAAEPATIFKP*
Ga0136449_1037986192	3300010379	Peatlands Soil	MTKFTRRELAAALSTSAVLLARPQAQPQTQPIPSNPDDELKAVRAQLRESADQLDKFPLPMSAEPATTFKA*
Ga0181538_107080732	3300014162	Bog	SKFTRRELAAALSTSAVLLARPQAAPPLALPANPEEELKAAQAQLRDNAAQLDKFPLPMDAEPATTFKP*
Ga0181528_101127372	3300014167	Bog	MSRFTRRELAAALSTSAVLLARPRPLPQTQPASPDEELKTSLAQLRDNADQLDKFPLPMSAEPAVTFKP*
Ga0181531_104325322	3300014169	Bog	MSKFTRRELAAGLATSAVLLAQPQSQPQPLPANPDEELTAARSQLRDGADQLDKFPLPMSTEPATIFRP*
Ga0182018_106727902	3300014489	Palsa	LEAMNKFTRRELAATLATSSVLLARPQAQPNAQSPAQPLPANPDEEMKASRAQLESNAGQLDKFPLPMSTEPATTFRP*
Ga0182015_101420542	3300014495	Palsa	MNKFTRRELAAGLSASAVLLARPQAQPSGQPPVQPLPANPDDELKASRAQLQDNAAQLDKFPLPMSTEPATTFRP*
Ga0182024_1000364321	3300014501	Permafrost	MSRFTRRELAAALSTSAVLLARPQAPTAAPALPANAGEELTASRAQLRDNADQLDKFPLPMDVEPATTFKP*
Ga0182024_101723822	3300014501	Permafrost	MSKFTRRELAAALSTSAVLLARPQAPTLPQALPANAEDELKASRAQLRDNADQLDKFPLPMAAEPATTFKP*
Ga0182024_119767672	3300014501	Permafrost	FTRRELAAALSTSAVLLARPQAAPPLALPANPEEELKAAQAQLRDNAGQLDKFPLPMDAEPATTFKP*
Ga0181525_100753592	3300014654	Bog	MSKFTRRELGAALSTSAVLLAQAQPSPQALPANAADELQASRAQLRENAGLLDQFPLPMATEPATAFKP*
Ga0181525_103066442	3300014654	Bog	MSKFTRRELAAALSTSAVLLARPQVQAPAPALPANPDEELKASRAQLHDNAEQLDKVPLPMSAEPATIFKA*
Ga0181525_103218812	3300014654	Bog	MSKFTRRELAGALSTSAVLLARPQAAAPPALPANPEEELKAAQAQLRDNAAQLDKFPLPMDAEPATTFKP*
Ga0181525_105396362	3300014654	Bog	MSRFTRRELGAALSTSAVLLARPQPQPLPQTQPASPDDELKTSRAQLRDNADQLDKFPLPMSAEPAVTFKP*
Ga0181522_103199212	3300014657	Bog	MNKFTRRELAAGLATSAVLLAQPQSQPQPLPANPEEELTAARSQLRDGADQLDKFPLPMSTEPATTFKP*
Ga0187856_100032640	3300017925	Peatland	MSKFTRRELAAALSTSAVLLARPQAQTPPQAPSPDDELKASRAQLRDNADQLDKFPLPMAAEPATAFKP
Ga0181520_106389261	3300017988	Bog	MSKFTRRELAAALSTSAVLLARPQGPPPPAQALPANPDEELKASRGQLRDNADQLDKFPLPMAAEPATTFKP
Ga0187810_102876451	3300018012	Freshwater Sediment	MSTFTRRELAAALSTSAVLLGRPQGQPAARPLPATPDDELKGSQAQLRANADQLDKFPLPMAAEPATTFKP
Ga0187863_101070502	3300018034	Peatland	MSKFTRRELAAALSTSAVLLARPQTPTSSQALPASPEQELQASRVQLRDNADQMDKFLLPMDTEPATTFKP
Ga0187851_100952132	3300018046	Peatland	MNRFTRRELAATLATSAVVLARPQTQPDAPPLPANPDEELKASRAQLRDNADQLDKFPLPMSTEPATIFKP
Ga0210401_100832782	3300020583	Soil	MSKFTRRELAAALSTSAVLLAQAPPPAQDLPANPDEDLQAVRAQLRGNADQLDKFPLPMATEPATMFKP
Ga0210401_101984362	3300020583	Soil	MNKFTRRELAAALSTSAVLLAQPPAQTQAQPPTQPLPANPAEELQASQAQLRDNAGQLDKFPLPMSTEPATAFKP
Ga0210406_103943672	3300021168	Soil	MSKFTRRELAVALSTSAVLLARPPAPTPQAPLPANAEEELKAARAQLRDNADQLEKFALPMDAEPATTFKP
Ga0210396_107791012	3300021180	Soil	MSKFTRRELAAALSTSAVLLARPQAPTLPQALPANAEDELKASRAQLHDNAEQLDKFPLAMSAEPATTFKP
Ga0210388_102017092	3300021181	Soil	MNKFTRRELAAGLATSAVLLGQPAPPPLPATPDEELKAVREQLRDAADQLDKFPLPMSTEPATTFHP
Ga0210388_102228402	3300021181	Soil	MGTLTRRELAAALSTSAVLLAQPPGQALPANPDEELKAARAQLQDSAGQLDKFQLPMSTEPAATFKP
Ga0210388_104975422	3300021181	Soil	MSKFTRRELAAALSTSAVLLARPQAPTPPQTLPANAEDELKASRAQLRDNADQLDKFPLAMSAEPATTFKP
Ga0210388_106761862	3300021181	Soil	MSKFTRRELAAALSTSAVLLARPQAPTPAPALPANATEELTAARAQLRDNADQLDKFPLPMDSEPATTFKP
Ga0210388_107084042	3300021181	Soil	MNRLTRRELAAALSTSAVLLARPQAQPTNSAALTPVDELAAARTQLRDNAAQLDKFPLPMAAEPATTFKP
Ga0213875_100556131	3300021388	Plant Roots	MDKFTRRELATALSTSAVLLAGVQPPLRGQPQTPPLPGNSGEELKASLAQLRDNSEQLDKFPLPMS
Ga0210385_104130952	3300021402	Soil	MSKFTRRELAAALSTSAVLLARPQVQAPAPALPANPDEELKASRAQLLDNAGQLDKVPLAMAAEPATIFKP
Ga0210394_100847264	3300021420	Soil	MSKFTRRELAAALSTSAVLLARPQAAPPPALPANPEEELKAAQAQLRDNAAQLDKFPLPMDAEPATMFKP
Ga0210391_103612052	3300021433	Soil	MSKFTRRELAAALSTSAVLLARPQVQAPAPALPANPDEELKASRAQLLDNAVQLDKVPLPMSADPATIFRP
Ga0210391_112307172	3300021433	Soil	MSKFTRRELAAALSTSAVLLARPQAPTPPPALPANPDEELKAARAQLRDNADQLDKFALPMDTEPATRFKP
Ga0210392_102753322	3300021475	Soil	MNRFTRRELAAALGTSAVVLAQPQGQPVPANADEELQAARAQIHDYAEQLDKFPLSMSAEPATTFKP
Ga0210398_102685301	3300021477	Soil	MSRFTRRELAAALSTSAVLLARPQVQAPAPALPANPDEELKASRAQLLDNAGQLDKVPLP
Ga0209221_11071552	3300027609	Forest Soil	TRRELAAALSTSAVLLAQAPPQSQDLPANPDQDLKAVQAQLRGNADQLDKFPLPMATEPATMFRP
Ga0208696_12615412	3300027696	Peatlands Soil	MNKFTRRELAAALSTSAVLLAQPPAQTQAQPPTQQPLPANPAEELQAAQAQLRDNAGQLEKFPLPMSTEPATTFKP
Ga0209274_101943271	3300027853	Soil	MSKFTRRELAAALSTSAVLLARPQVQAPAPALPANPDEELKASRAQLLDNAGQLDKVPLAMAAEPATIFRP
Ga0209517_101084802	3300027854	Peatlands Soil	MNRFTRRELAAVVSTSAVLLARPQAQPATQPLPANPAEELQASQAQLRDNAGQLDKFPLPMSVEPATTFKA
Ga0209517_106851982	3300027854	Peatlands Soil	SMNKFTRRELAAAVSTSAVLLARPQAQPPTQPIPANPAEELQASQAQLRDNAGQLDKFPLPMSVEPATTFKA
Ga0209166_103549581	3300027857	Surface Soil	LLARSCTTLESMNKFTRRELAVALSTSTVLLARPQSQPQAQPLPANPDEELKASRAQLHDNAEQLDKFPLPMSAEPATIFKP
Ga0209167_107942491	3300027867	Surface Soil	MSTFTRRELAAALSSSAVLLARPQAPSPVQALPANPDEELKASQAQLRDNAAQMDKFPLPMETEPATTFKP
Ga0209579_105255262	3300027869	Surface Soil	MIRFTRRELAATLSTSAVLLARPQAQPPSQPIPESPQDELKASRAQLQTNAEQLDKFPLSMSAEPATTFKP
Ga0209169_100140662	3300027879	Soil	MSKFTRRELAAALSTSAVLLARPQVQAPAPALPANPDEELKASRAQLLDNAGQLDKVPLPMSAEPATIFKP
Ga0209380_102622292	3300027889	Soil	MNKFTRRELAAAISTSAVLLAQPPAQTQAQPPAQPLPANPAEELQATQAQLHDNAGQLVKFPLPMSTETA
Ga0209415_102243732	3300027905	Peatlands Soil	MTKFTRRELAAALSTSAVLLARPQAQPQTQPIPSNPDDELKAVRAQLRESADQLDKFPLPMSAEPATTFKA
Ga0209415_107112632	3300027905	Peatlands Soil	LAAALSTSAVLLARPQAQPQPQPLPANPDDELKAVRAQLRETAEQLDKFPLPMSTEPATTFKA
Ga0209006_100167913	3300027908	Forest Soil	MSKFTRRELAAALSTSAVLLAQAPPQSQDLPANPDQDLKAVQAQLRGNADQLDKFPLPMATEPATMFRP
Ga0209006_114747221	3300027908	Forest Soil	MSKFTRRELAAALSTSAVLLARPQATAPTQALPTSPNEELKASQAQLRDNADQLDKFPLPMDAEPATIFKP
Ga0302219_103078122	3300028747	Palsa	MSKFTRREIAAALSTSAVLLARPQVQAPAPALPANPDEELKASRAQLHDNAEQLDKVPLPMSAEPATIFKA
Ga0302222_101626512	3300028798	Palsa	MSKFTRRELAAALSTSGILLARPQGQPQARALPVNSDDELKAARAQLLDNAEQLDKFPLPMTTEPATTFKP
Ga0308309_100569063	3300028906	Soil	MSKFTRRELAAALSTSAVLLARPQVQAPAPALPANPDEELKASRAQLLDNAGQLDKVPLPMSAEPATIFRP
Ga0311340_109058181	3300029943	Palsa	MSKFTRRELAAALSISAILVARPQASPNAQPLPANPDEELKASRAQLRDGADQLDKFPLPMSTEPATTFKP
Ga0311339_104881202	3300029999	Palsa	MNKFTRRELAAGLSTSAVLLARPQAQPSGQSQAEALPANADEELKASRAQLRDTADQLDKVPLPMSTEPATIFRP
Ga0311339_105570521	3300029999	Palsa	MDKFTRRELAATLATSSVLLARPQAQPQTQPLPANASEELNASQAQLRDNADQLDKFPLPMSTEPATIFRP
Ga0311338_112352452	3300030007	Palsa	MSMSKFTRRELAATLATSAVLLGRPQAQPNAQPLPANADEELKASEAQLRDGAGQLEKFPLPMSTEPATTFKP
Ga0302177_100369292	3300030053	Palsa	MTKFTRRELAAALSMSAVLLAPLQAQPQVQAQAPALAANPDDELKASRAQLRDNADQLDKFPLPMAAEPATIFKA
Ga0302177_100563802	3300030053	Palsa	MSKFTRRELAAALSTSGILLARPQEQPQARALPVNSDDELKAARAQLLDNAEQLDKFPLPMTTEPATTFKP
Ga0311370_124578522	3300030503	Palsa	MSMSKFTRRELAATLATSAVLLGRPQAQPNAQPLPANADEELKASEAQLRDGAGQLDKFPLPMSTEPATTFKP
Ga0170834_1077211381	3300031057	Forest Soil	MSKFTRRELAIALSTSAVLLAQSPAPTPQAPLPANAEEELKAARAQLRDNADQLDKFALPMDAEPATTFKP
Ga0170823_149833131	3300031128	Forest Soil	MSKFTRRELAVALSTSAVLLAQSPAPTPQAPLPANAEEELKAARAQLRDNADQLDKFALPMDAEPATTFKP
Ga0170824_1030467121	3300031231	Forest Soil	MSKFTRRELAIALSTSAVLLAQPPAPTPQAPLPANAEEELKAARAQLRDNADQLDKFALPMDAEPATTFKP
Ga0302325_108836922	3300031234	Palsa	QFTTLEFMSKFTRRELAAALSTSAVLLGRPQAQAPPLALPANPEEELKAAQAQLRDNAGQLDKFPLPMDAEPATTFKP
Ga0302325_115793062	3300031234	Palsa	MNKFTRRELAATLATSSVLLARPQAQPNAQSPAQPLPANPDEEMKASRAQLESNAGQLDKFPLPMSTEPATTFRP
Ga0302325_125179972	3300031234	Palsa	MSKFTRRELAAALSTSGILLARPQEQPQARALPANSDDELKAARAQLRDNAEQLDKFPLAMTTEPATTFKP
Ga0302324_1001908242	3300031236	Palsa	MSKFTRRELAAALSTSGLLLARPQEQPQARALPANSDDELKAARAQLRDNAEQLDKFPLAMTTEPATTFKP
Ga0302324_1014584242	3300031236	Palsa	MSKFTRRELAAALSTSAVLLGRPQAQAPPLALPANPEEELKAAQAQLRDNAGQLDKFPLPMDAEPATTFKP
Ga0302320_112993281	3300031524	Bog	RELAAALSMSAVLLAPLQAQPQVQAQAPALAANPDDELKASRAQLRDNADQLDKFPLPMAAEPATIFKA
Ga0302326_113669732	3300031525	Palsa	KFTRRELAATLATSSVLLARPQAQPQTQPLPANASEELNASQAQLRDNADQLDKFPLPMSTEPATIFRP
Ga0302326_124358742	3300031525	Palsa	MCMSKFTRRELAATLATSAVLLGRPQVPPTIQSQPQPLPANPDDELKASRAQLLEGADQLDKFPLPM
Ga0310686_1053752602	3300031708	Soil	MNKFTRRELAAGLSASAVLLARPQAQPNPQPTAQPLPANPDEELKASRAQLENNAGQLDKFPLPMSTEPATTFRP
Ga0310686_1132827532	3300031708	Soil	MSKFTRRELAAALSTSAVLLAQAQPQAQDLPANPDQDLKAVQAQLRGNADQLDKFPLPMATEPATMFKP
Ga0310686_1151442402	3300031708	Soil	MNKFTRRELAAGLSTAAVLLARPQSQPQPPANPAEELTASRTQLRDGADQMDKFPLPMSTEPATTFKP
Ga0307475_114793401	3300031754	Hardwood Forest Soil	MSKFTRRELAVALSTSAVLLAQPPAPTPQAPLPANAEEELKAARAQLRDNADQLEKFALPMDAEPATTFKP
Ga0307470_100430892	3300032174	Hardwood Forest Soil	MSKFTRRELAVALSTSAVLLAQSPAPTPQAPLPANAEEELKAARAQLRDNADQLEKFALPMDAEPATTFKP
Ga0335082_103347982	3300032782	Soil	MNKFTRRELAVAASASAILLGRAQAQPQTQPLPANPDEELKAARAQLREYSDQLDKFPLAMSAEPATTFKP
Ga0335078_102364393	3300032805	Soil	MSKFTRRELAVALSTSAVLLGRPQDKAPSPANPAVSPASNPGDELKAARDQLRDIADQLDKFPLPMAAEPATIFKP
Ga0335074_100227622	3300032895	Soil	MNRFTRRELAVTLSASAVLLAQPETPPIPANPAAELQASEAQLRDTAAQLDQFPLPMATEPVTIFKP
Ga0335076_103200522	3300032955	Soil	MHKLTRRELAAGLSASAVLLARPATAQTPAAPIPSNAAEELKASEAQLRETSDQLDKFPLPMSAEPATIFKP
Ga0335073_104643362	3300033134	Soil	MDKVTRRELAAALSVGALVAPAALLAQPQASPPQASADDELKISRDQFRGNADQLDKFPLPMATEPATIFKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087497

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences