NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F087462

Metagenome / Metatranscriptome Family F087462

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F087462
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 44 residues
Representative Sequence MTERRHELRRFPWLVRDSGLLLLVVAAGVVLVASVAQTAVEGL
Number of Associated Samples 95
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 68.18 %
% of genes near scaffold ends (potentially truncated) 97.27 %
% of genes from short scaffolds (< 2000 bps) 90.91 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(41.818 % of family members)
Environment Ontology (ENVO) Unclassified
(25.455 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.909 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 49.30%    β-sheet: 0.00%    Coil/Unstructured: 50.70%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.49
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF13487HD_5 90.00
PF08281Sigma70_r4_2 3.64
PF01966HD 1.82
PF01258zf-dskA_traR 0.91
PF02586SRAP 0.91
PF13490zf-HC2 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG1734RNA polymerase-binding transcription factor DksATranscription [K] 0.91
COG2135ssDNA abasic site-binding protein YedK/HMCES, SRAP familyReplication, recombination and repair [L] 0.91

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10201156All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1317Open in IMG/M
3300004153|Ga0063455_100109520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae1162Open in IMG/M
3300005538|Ga0070731_10319233All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1031Open in IMG/M
3300005591|Ga0070761_10163779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1306Open in IMG/M
3300006052|Ga0075029_100077847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1960Open in IMG/M
3300006176|Ga0070765_102205279All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii514Open in IMG/M
3300006903|Ga0075426_10630419All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura madurae801Open in IMG/M
3300009522|Ga0116218_1448622All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia575Open in IMG/M
3300009792|Ga0126374_10054276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2053Open in IMG/M
3300009824|Ga0116219_10239989All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1031Open in IMG/M
3300010861|Ga0126349_1078807All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia782Open in IMG/M
3300010876|Ga0126361_10899819All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia604Open in IMG/M
3300011090|Ga0138579_1325965All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1702Open in IMG/M
3300011120|Ga0150983_16247084All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia760Open in IMG/M
3300011269|Ga0137392_10733910All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii817Open in IMG/M
3300012212|Ga0150985_105133167All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2895Open in IMG/M
3300012351|Ga0137386_10261965All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1243Open in IMG/M
3300014499|Ga0182012_10886704All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii563Open in IMG/M
3300016270|Ga0182036_11353463All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia595Open in IMG/M
3300016294|Ga0182041_11349097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia653Open in IMG/M
3300016404|Ga0182037_10657175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales894Open in IMG/M
3300016422|Ga0182039_11133869All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii705Open in IMG/M
3300016445|Ga0182038_11973435All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii528Open in IMG/M
3300017821|Ga0187812_1009912All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales3299Open in IMG/M
3300017937|Ga0187809_10145337All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia818Open in IMG/M
3300017937|Ga0187809_10298900All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii593Open in IMG/M
3300017959|Ga0187779_10351542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii952Open in IMG/M
3300017959|Ga0187779_10412106All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii883Open in IMG/M
3300017961|Ga0187778_10610853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia732Open in IMG/M
3300017972|Ga0187781_11437338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales511Open in IMG/M
3300017974|Ga0187777_10961024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia616Open in IMG/M
3300017993|Ga0187823_10076065All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii966Open in IMG/M
3300018042|Ga0187871_10601151All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia610Open in IMG/M
3300018044|Ga0187890_10882525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii504Open in IMG/M
3300018062|Ga0187784_10046884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales3496Open in IMG/M
3300018062|Ga0187784_10772756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii767Open in IMG/M
3300018062|Ga0187784_11205426All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii600Open in IMG/M
3300020150|Ga0187768_1035573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1092Open in IMG/M
3300021181|Ga0210388_10397167All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae1212Open in IMG/M
3300021181|Ga0210388_10960041All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia734Open in IMG/M
3300021374|Ga0213881_10430671All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii595Open in IMG/M
3300021377|Ga0213874_10187461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii738Open in IMG/M
3300021401|Ga0210393_11028153All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia666Open in IMG/M
3300021433|Ga0210391_10615568All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii852Open in IMG/M
3300021433|Ga0210391_10882254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae698Open in IMG/M
3300021479|Ga0210410_10976670All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia735Open in IMG/M
3300022513|Ga0242667_1027497All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii632Open in IMG/M
3300022522|Ga0242659_1072987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii642Open in IMG/M
3300022714|Ga0242671_1003667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1536Open in IMG/M
3300022716|Ga0242673_1003944All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1595Open in IMG/M
3300022716|Ga0242673_1126325All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii518Open in IMG/M
3300022718|Ga0242675_1002976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1665Open in IMG/M
3300022718|Ga0242675_1116846All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii530Open in IMG/M
3300027064|Ga0208724_1010081All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii902Open in IMG/M
3300027765|Ga0209073_10374212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia579Open in IMG/M
3300027842|Ga0209580_10133640All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1215Open in IMG/M
3300027853|Ga0209274_10006087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae5509Open in IMG/M
3300027905|Ga0209415_11082302All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii524Open in IMG/M
3300027908|Ga0209006_10323705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1311Open in IMG/M
3300028450|Ga0189898_1034172All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia541Open in IMG/M
3300028906|Ga0308309_11563456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii562Open in IMG/M
3300029701|Ga0222748_1004344All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1582Open in IMG/M
3300029701|Ga0222748_1082117All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii602Open in IMG/M
3300029882|Ga0311368_10150764All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1901Open in IMG/M
3300029910|Ga0311369_11295853All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae557Open in IMG/M
3300030548|Ga0210252_10477310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1736Open in IMG/M
3300030602|Ga0210254_10547068All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii857Open in IMG/M
3300030618|Ga0311354_10098859All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales3262Open in IMG/M
3300030624|Ga0210251_10908473All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1017Open in IMG/M
3300030632|Ga0210250_10473780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii557Open in IMG/M
3300030737|Ga0302310_10300761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii903Open in IMG/M
3300030740|Ga0265460_12077298All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia593Open in IMG/M
3300030741|Ga0265459_10180152All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1341Open in IMG/M
3300030741|Ga0265459_11472553All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia774Open in IMG/M
3300030741|Ga0265459_14153851All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii508Open in IMG/M
3300030763|Ga0265763_1044713All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia543Open in IMG/M
3300030836|Ga0265767_111881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii595Open in IMG/M
3300031057|Ga0170834_112032130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia734Open in IMG/M
3300031525|Ga0302326_11051359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1137Open in IMG/M
3300031525|Ga0302326_11264582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1009Open in IMG/M
3300031543|Ga0318516_10246148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1034Open in IMG/M
3300031564|Ga0318573_10081776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1632Open in IMG/M
3300031640|Ga0318555_10495208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii662Open in IMG/M
3300031680|Ga0318574_10505573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales708Open in IMG/M
3300031708|Ga0310686_104054064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia595Open in IMG/M
3300031708|Ga0310686_111407059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii531Open in IMG/M
3300031747|Ga0318502_10284008All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura971Open in IMG/M
3300031747|Ga0318502_10550542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii693Open in IMG/M
3300031748|Ga0318492_10461930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii671Open in IMG/M
3300031751|Ga0318494_10012397All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales4072Open in IMG/M
3300031751|Ga0318494_10551319All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia673Open in IMG/M
3300031765|Ga0318554_10024013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales3217Open in IMG/M
3300031782|Ga0318552_10468230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii643Open in IMG/M
3300031831|Ga0318564_10131034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1117Open in IMG/M
3300031845|Ga0318511_10393035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia635Open in IMG/M
3300031860|Ga0318495_10134511All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1114Open in IMG/M
3300031872|Ga0316033_106425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii684Open in IMG/M
3300031893|Ga0318536_10182477All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1068Open in IMG/M
3300031897|Ga0318520_10570353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii702Open in IMG/M
3300032052|Ga0318506_10091760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1289Open in IMG/M
3300032055|Ga0318575_10526323All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii600Open in IMG/M
3300032060|Ga0318505_10180255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii985Open in IMG/M
3300032063|Ga0318504_10290255All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia773Open in IMG/M
3300032064|Ga0318510_10058092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1388Open in IMG/M
3300032068|Ga0318553_10465178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii662Open in IMG/M
3300032091|Ga0318577_10337587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia720Open in IMG/M
3300032895|Ga0335074_10095517All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales3931Open in IMG/M
3300032896|Ga0335075_11121013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii691Open in IMG/M
3300033808|Ga0314867_056619All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii916Open in IMG/M
3300034065|Ga0334827_000973All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia15112Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil41.82%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland8.18%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.55%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil4.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.55%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.64%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.64%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.64%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.82%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.82%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.82%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.82%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.91%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.91%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.91%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.91%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.91%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.91%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.91%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.91%
Exposed RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock0.91%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.91%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.91%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009522Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaGEnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010861Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011090Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300014499Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaGEnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017821Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300020150Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MGEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021374Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08EnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022513Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022522Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022714Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022716Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022718Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300027064Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028450Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029701Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029910III_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030548Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR016SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030602Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR018SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030624Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR005SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030632Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR004SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030737Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2EnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300030741Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assemblyEnvironmentalOpen in IMG/M
3300030763Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030836Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300031872Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU2 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300033808Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20EnvironmentalOpen in IMG/M
3300034065Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1020115623300001593Forest SoilMVTTERRHELRRYPWQVRDSGQLLLVVAAGVWLVAAVA
Ga0063455_10010952013300004153SoilMTSRRHELRRYPWQVRDSGQLLLVAAAGVWLVAAVAQTAAEGLKD
Ga0070731_1031923323300005538Surface SoilMTERRHELHRFPWQVRDSGLLLLVVAAGVVLVASVAQT
Ga0070761_1016377923300005591SoilVTERRHELRRFPWRVRDSGQLVLVVAAGLVLVASVAQTAVEGLRDP
Ga0075029_10007784713300006052WatershedsMSVRRPELRRYPWQVRDSGQLLLVVAAGVWLVASVAQTAADGLQD
Ga0070765_10220527913300006176SoilMTERRYELRRFPWLVRDSGLLLLVVAAGVVLVASV
Ga0075426_1063041923300006903Populus RhizosphereMASRRHELRRYPWQMRDSGQLLLIAAAGVWLVAAVAQTAAE
Ga0116218_144862213300009522Peatlands SoilMSVRRHELRRYPWQVRDSGQLLLVVAAGVWLMVSVAQTAADGLQDPRIA
Ga0126374_1005427633300009792Tropical Forest SoilMRRYPWQVRDSGQLLLVVAAGVWLVAAVAQTAVEG
Ga0116219_1023998913300009824Peatlands SoilMTERRHELHRFPWQVRDSGLLLLVVAAGVVLVASVAQTAATGVRDPRIAVAF
Ga0126349_107880723300010861Boreal Forest SoilMTERRHELRRFPWLVRDSGLLLLVVAAGVVLVASVAQTAVEGLRDPRIAVAF
Ga0126361_1089981923300010876Boreal Forest SoilVTERRHELRRFPWRVRDSGQLLLVVAAGLVLVASVAQTAV
Ga0138579_132596533300011090Peatlands SoilMSVRRHELRRYPWQVKDSGQLLLVVAAGVWLVASVAQTAADGLQDPR
Ga0150983_1624708423300011120Forest SoilMTERRHELRRFPWQVRDSGQLLLVAAAGVLLVASVAQTAGTGLSDG
Ga0137392_1073391013300011269Vadose Zone SoilMTERRHELRRYPWQVRDSGQLLLVVAAGVWLVAAVAKTAAGGL
Ga0150985_10513316713300012212Avena Fatua RhizosphereMRRHPWHVRDSGQLLLVVAAGVWLVAAVAKTAAEG
Ga0137386_1026196513300012351Vadose Zone SoilMRRYPWQIRDSGQLLLVVAAGVWMVAAVAQTAAKGLQ
Ga0182012_1088670423300014499BogMTERRHELRRYPWQVRDSGQLLLVLAALVWVVASV
Ga0182036_1135346323300016270SoilMTERHEPRRFPWQVRDSGLLLLVAAAGVALVASAAQPAVEG
Ga0182041_1134909713300016294SoilMTERRYELRRPPWQVRNSGLLLLVAAAGVVLVASVAQTAVEGLRDPR
Ga0182037_1065717523300016404SoilMTRYELRRFPWQVRDSGLLLLMVAAGVVLVASVAQTAVQGLRDPRIAVAFGVLI
Ga0182039_1113386913300016422SoilMTERSHAPRRFPWQVRDSGLLLLVAAAGVVLVASVAQTAVEGLRDPRDAAAFGLLIALGEVL
Ga0182038_1197343513300016445SoilMTERSHAPRRFPWQVRDSGLLLLVAAAGVVLVASVAQT
Ga0187812_100991213300017821Freshwater SedimentMSVRRHELRRYPWQVRDSGQLLLVVAAGVWLVASVAQTAANGLQDPRIAIA
Ga0187809_1014533723300017937Freshwater SedimentVTERRYELRRLPWQVRNSGLLLLVAAAGVVLVASVAQT
Ga0187809_1029890013300017937Freshwater SedimentMTERRYELRRFRWQMRDSGPLLLVAAAGVVLVASVAQTAVEGL
Ga0187779_1035154223300017959Tropical PeatlandMTERRYEPRRFPWQVRDSGLLLLVAAAGVVLVASVAQTAVG
Ga0187779_1041210613300017959Tropical PeatlandMSERRHELRRYPWRVRDSGQLLLVVAAGVWLMASVTQTAAEGL
Ga0187778_1061085313300017961Tropical PeatlandMTERRHELGRLSWQLTDSGLLLVVAAGVVLVASVAQTAVEGLRDPRIAVAFGILI
Ga0187781_1143733823300017972Tropical PeatlandMTERRHELRRFPWQVRDSGLLLLLAAAGVVLVASVAQTAAAGLRDPRTAVAFGV
Ga0187777_1096102423300017974Tropical PeatlandMTERRYELARIPWQVRDSGQLLLVVAAGVVLVASVAQTAVEGLR
Ga0187823_1007606513300017993Freshwater SedimentMTERRYELRRLPWQVRDSGLLLLVVAAGVVLVASVAQTAVAGLRDPHIALACGV
Ga0187871_1060115113300018042PeatlandMTERRHELRRYPWQVPDSGQLLLVVAAGVWLVASVAQTAA
Ga0187890_1088252513300018044PeatlandMTERRHELRRYPWQVRDSGQLLIVVAAGMWLVASVAQTAATGV
Ga0187784_1004688413300018062Tropical PeatlandMSEPRHELRRRPRRMRDSGQLLPIAAAGVVLVASVAQTAVAGVRDVRI
Ga0187784_1077275623300018062Tropical PeatlandMSERRHELRRHPWPVRNSGQLLLIAAAGVVLVASVAQTAVGG
Ga0187784_1120542613300018062Tropical PeatlandMTERRYELRRLRWQVRDSGSLVLVAAAGVVLVASVAQTAVAGL
Ga0187768_103557313300020150Tropical PeatlandMTERRYEPRRFPWQVRDSGLLLLVAAAGVVLVASVAQTAV
Ga0210388_1039716723300021181SoilVTERRHELRRFPWRVRDSGQLVLVVAAGLVLVASVAQTAVTGLRDARVAL
Ga0210388_1096004113300021181SoilMSERRHEHHRLPWRVRDSGQLLLVVAAGVWLVASVAQTAV
Ga0213881_1043067113300021374Exposed RockMPERRRELRRGPWQVRDSGQLLLVAAAGMVLVASVAQ
Ga0213874_1018746123300021377Plant RootsMTERRYELRRYRWQLRDSGELLLVVAAGVWLVAAVAQT
Ga0210393_1102815313300021401SoilMSERRHEHPRFPWQVRDSGQLLLVVAAGVWLVASVAQTAVEGLQD
Ga0210391_1061556823300021433SoilMSERRHELHRFPWHVRDSGQLLLVVAAGVVLVASVAQTAVS
Ga0210391_1088225413300021433SoilVTERRHELRRFPWRVRDSGQLVLVVAAGLVLVASVAQTAVTGLRDP
Ga0210410_1097667013300021479SoilMTERRYELRRFPWLVTDSGSLLLVVAAGVVLVASVAQTAAQ
Ga0242667_102749713300022513SoilMTERRHELHRFPWQVRDSGLLLLVVAAGVVLVASVAQTAVEGL
Ga0242659_107298723300022522SoilMTERRHELRRFPWLVRDSGVLLLVVAAGVVLVASVAQTAAEGL
Ga0242671_100366713300022714SoilVTERRHELRRFPWRVRDSGQLVLVVAAGLVLVASVAQTAVTGL
Ga0242673_100394413300022716SoilMSQHRHEQRRFPWQIGDSGELLLAAAAGVLLVASVAQ
Ga0242673_112632513300022716SoilMTERRHELRRFPWQVRDSGLLVLIVAAGVVLVASVAQTSVEDLR
Ga0242675_100297613300022718SoilMSVRRHELRRYPWQVTDSGQLLLVVAAGVWLVASVAQT
Ga0242675_111684623300022718SoilMTQRRYELRRSPWQVRDSGLLLLVVAAGVVLVASVAQTAAEGLRDP
Ga0208724_101008113300027064Forest SoilMSQHRHELRRFPWQIGDSGELLLAAAAGVLLVASVAQTTGT
Ga0209073_1037421223300027765Agricultural SoilMASRRHELRRYPWQMRDSGQLLLIAAAGVWLVAAVAQTAAEG
Ga0209580_1013364013300027842Surface SoilMSERRHELRRRPWPVRNSGQLLLIAAAGVVLVASV
Ga0209274_1000608783300027853SoilMTERRHELHRFPWQVRDSGLLLLVVAAGVVLVASVAQ
Ga0209415_1108230213300027905Peatlands SoilMSERRHEPRRRPWPVRNSGQLLLIAAAGVVLVASVAQTAVEGVHDTR
Ga0209006_1032370513300027908Forest SoilMVERRHQLRRFPWQVRDSGLLLLIVAAGVVLVGSVAQTAAQGLRDPRIAVAF
Ga0189898_103417223300028450Peatlands SoilMSVRRHELRRYPWQVKDSGQLLLVVAAGVWLVASVAQTAADGLQG
Ga0308309_1156345623300028906SoilMTERRYELRRFPWLVRDSGLLLLVVAAGVVLVASVAQTAVAGLRDPHIALA
Ga0222748_100434413300029701SoilVTERRHELRRFPWRVRDSGQLVLVVAAGLVLVASVAQTAATGLHDVNIAIAFGLLI
Ga0222748_108211723300029701SoilMTERRYELRRFPWLVRDSGLLLLVVAAGVVLVASVAQTAVAGLRD
Ga0311368_1015076433300029882PalsaMTERRHELRRYPWQVRDSGQLLLVVAAGVCLVASVAQTAATGV
Ga0311369_1129585313300029910PalsaMTERRHELRRFPWQVRDSGLLLLAVAAGVVLVASVAQTAADGLRDPRIAVAFGILIAFGEVLRLN
Ga0210252_1047731013300030548SoilMSQHRHELRRFPWQVGDSGQLLLAAAAGVLLVASVAQTAGTGLRDSKINKENKKLE
Ga0210254_1054706813300030602SoilMTERRHELRRFPWQVRDSGLLLLVVAAGVVLFASVAQTA
Ga0311354_1009885953300030618PalsaMTERRHELRRYPWQVRDSGQLLIVVAAGVWLVASVAQTAADGVTGPRIAIAF
Ga0210251_1090847323300030624SoilMAERRHELRRFPWQVRDSGLWLLIIAAGVVLVGSVAQ
Ga0210250_1047378013300030632SoilMVTTERRHELRRYPWRVRDSGQLLLVVAAGVWLVAAVAQTAATGLHD
Ga0302310_1030076123300030737PalsaMTERRHELRRYPWQVRDSGQLLLVVAAGVWLVASVAQTAATGLTDPRTA
Ga0265460_1207729823300030740SoilMSQHRHELRRFPWQVGDSGQLLLAAAAGVLLVASVAQTTGTGLKDSRRKNK
Ga0265459_1018015213300030741SoilMSERRHELHRFPWHVRDSGQLLLVVAAGVVLVASVAQTAVSGLRDVREGKKT
Ga0265459_1147255313300030741SoilMSQHRHELRRFPWQIGDSGELLLAAAAGVLLVASVAQTTGTGLKEKIKINISRY
Ga0265459_1415385123300030741SoilMTERRHELRRYPWQVRDSGQLLLVVAAGVCLVASVAQTAATGVTDPRIAI
Ga0265763_104471323300030763SoilVSVRRHELRRYPWQVKDSGQLLLVVAAGVWLVASVAQTAAAGLQD
Ga0265767_11188123300030836SoilMTERRHELRRFPWQVRDSGQLLLVAAAGVLLVASVAQT
Ga0170834_11203213013300031057Forest SoilMTERRHELRRFPWLVRDSGLLLLVVAAGVVLVASVAQTAVEGL
Ga0302326_1105135923300031525PalsaMTERRHELRRYPWQVRDSGQLLLVVAAGVWLVASVAQTAA
Ga0302326_1126458213300031525PalsaMSERRHELHRFPWHVRDSGQLLLVVAAGVVLVASVAQT
Ga0318516_1024614823300031543SoilMTERRYELRRFPWQVRDSGLLLLVVAAGVVLVASVA
Ga0318573_1008177613300031564SoilMTERYEPRRFPWQVRDSGLLLLVAAAGVVLVASVAQTAVEGL
Ga0318555_1049520813300031640SoilMTERRYELRRFPWQVRDSGLLLLVAAAGVVLVASVAQTAVE
Ga0318574_1050557313300031680SoilMTERRYELRRFPWQVRDSGLLLLVVAAGVVLVASVAQTAVEGLRDPRIAVAFGV
Ga0310686_10405406413300031708SoilMTQRRYELRRFPWQVRDSGLLLLVVAAGVVLFASVAQTAVEGLRDPRIAVAFG
Ga0310686_11140705923300031708SoilMSERRHEPRRRPWPVRNSGQLLLIAAAGVVLVASVAQT
Ga0318502_1028400823300031747SoilMTERSHAPRRFPWQVRDSGLLLLVAAAGVVLVASVAQTAVEGLRDPRIAAAFGLLIALGE
Ga0318502_1055054223300031747SoilMTERRHELRRLPWQVRDSGLLLLVVAAGVVLVASVAQTAVEGLRD
Ga0318492_1046193013300031748SoilMTERSHAPRRFPWQVRDSGLLLLVAAAGVVLVASVAQTAVEGLRDPRI
Ga0318494_1001239763300031751SoilMTERHEPRRFPWQVRDSGLLLLVAAAGVVLVASVAQ
Ga0318494_1055131923300031751SoilMTERRYELRRPPWQVRNSGLLLLVAAAGVVLVASVAQT
Ga0318554_1002401353300031765SoilMTERYEPRRFPWQVRDSGLLLLVAAAGVVLVASVAQTAVEGLRDPR
Ga0318552_1046823013300031782SoilMTERSHAPRRFPWQVRDSGLLLLVAAAGVVLVASVAQTAVEGLRDPRDAAAFGLLI
Ga0318564_1013103413300031831SoilMSELRRYPWQVRDSGELLLMVAAGVWLVAAVAQTAAEGLRDPR
Ga0318511_1039303513300031845SoilMSELRRYPWQVRDSGQLLLLVAAGVWLVAAVTQTAAEGLKDPRIA
Ga0318495_1013451113300031860SoilMTERSHAPRRFPWQVRDSGLLLLVAAAGVVLVASVAQTAVEGLRDPRIAAAFGLL
Ga0316033_10642513300031872SoilMMTERRHELRRFPWQVRDSGQLLLVAAAGVLLVASVAQTA
Ga0318536_1018247723300031893SoilMTERSHAPRRFPWQVRDSGLLLLVAAAGVVLVASVAQTAVEGLRDPRIAAAF
Ga0318520_1057035323300031897SoilMTERSHAPRRFPWQVRDSGLLLLVAAAGVVLVASVAQTAVEGLRDPR
Ga0318506_1009176013300032052SoilMTERRYELRRPPWQVRNSGLLLLVAAAGVVLVASVAQTAV
Ga0318575_1052632323300032055SoilVTGHDQSPETAMSERRHYPWRVRDSGQLLLVVAAGICLVASVTQTAAEGLK
Ga0318505_1018025523300032060SoilMTERSHAPRRFPWQVRDSGLLLLVAAAGVVLVASVAQTAVEGLRDPRIAVA
Ga0318504_1029025513300032063SoilVTSHDDSPETAMSERRHYPWHVRDSGQLLLVVAAGVCLVASVTQTAAEGLK
Ga0318510_1005809213300032064SoilMSELRRYPWQVRDSGELLLMVAAGVWLVAAVAQTAAEGLRD
Ga0318553_1046517813300032068SoilMTERSHAPRRFPWQVRDSGLLLLVAAAGVVLVASVAQTAVEGLRDP
Ga0318577_1033758723300032091SoilMTERRYELRRFPWQVRDSGLLLLTVGAGVVLVASVAQTAVE
Ga0335074_1009551713300032895SoilMGERRHELHRFPWHVRDSGQLLLVVAAGVVLVASVAQTAI
Ga0335075_1112101323300032896SoilMGERRHELHRFPWHFRDSGQLLLVAAAGVVLVASVAQTAASGLH
Ga0314867_056619_781_9153300033808PeatlandMTERRYELRRIPWQVRDSGQLLLVVAAGVVLVASVAQTAVEGLRD
Ga0334827_000973_3_1283300034065SoilMTERRHELRRYPWQVRDSGQLLLVLAALVWVVASVAQTAAAG

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.