Metagenome / Metatranscriptome Family F087446

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087446
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	83 residues
Representative Sequence	VPDEYEIAVDFMDMTNDRHLWARAADARPDLELSVGRHVVVGDEDADPKVARIVAVDADGNVELEVLPGSVESHSDLLAPA
Number of Associated Samples	92
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.93 %
% of genes near scaffold ends (potentially truncated)	17.27 %
% of genes from short scaffolds (< 2000 bps)	71.82 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.364 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand (13.636 % of family members)
Environment Ontology (ENVO)	Unclassified (17.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.545 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.84% β-sheet: 28.44% Coil/Unstructured: 58.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF04343	DUF488	1.83
PF01909	NTP_transf_2	1.83
PF10127	RlaP	1.83
PF09720	Unstab_antitox	1.83
PF05787	DUF839	1.83
PF04851	ResIII	1.83
PF01850	PIN	0.92
PF10611	DUF2469	0.92
PF01695	IstB_IS21	0.92
PF03965	Penicillinase_R	0.92
PF08681	DUF1778	0.92
PF13560	HTH_31	0.92
PF07819	PGAP1	0.92
PF07676	PD40	0.92
PF00834	Ribul_P_3_epim	0.92
PF10974	DUF2804	0.92
PF00069	Pkinase	0.92
PF12840	HTH_20	0.92
PF13669	Glyoxalase_4	0.92
PF00589	Phage_integrase	0.92
PF12728	HTH_17	0.92
PF00271	Helicase_C	0.92
PF13360	PQQ_2	0.92
PF13087	AAA_12	0.92
PF03060	NMO	0.92
PF14659	Phage_int_SAM_3	0.92
PF02481	DNA_processg_A	0.92
PF05721	PhyH	0.92
PF00440	TetR_N	0.92
PF01569	PAP2	0.92
PF01523	PmbA_TldD	0.92
PF00583	Acetyltransf_1	0.92
PF00196	GerE	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.67
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	1.83
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	1.83
COG3211	Secreted phosphatase, PhoX family	General function prediction only [R]	1.83
COG0036	Pentose-5-phosphate-3-epimerase	Carbohydrate transport and metabolism [G]	0.92
COG0312	Zn-dependent protease PmbA/TldA or its inactivated homolog	General function prediction only [R]	0.92
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.92
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.92
COG1075	Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold	Lipid transport and metabolism [I]	0.92
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.92
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.92
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.92
COG2267	Lysophospholipase, alpha-beta hydrolase superfamily	Lipid transport and metabolism [I]	0.92
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.92
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	0.92
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.36 %
Unclassified	root	N/A	43.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.36 %
Unclassified	root	N/A	43.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.36 %
Unclassified	root	N/A	43.64 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.36 %
Unclassified	root	N/A	43.64 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.91 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	45.45 %
Unclassified	root	N/A	43.64 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.64 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.27 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	6.36 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.91 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.64 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	19.09 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	3.64 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	0.91 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.91 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.91 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.91 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.91 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.64 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	19.09 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	3.64 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.91 %
unclassified Euzebyales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales	0.91 %
Iamiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	0.91 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.91 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.91 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.64 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	19.09 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	3.64 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.91 %
Euzebyales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	0.91 %
Rhabdothermincola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola	0.91 %
unclassified Nocardioidaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae	0.91 %
unclassified Pseudonocardiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae	0.91 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.64 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	19.09 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	3.64 %
Rhabdothermincola salaria	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria	0.91 %
Pseudonocardiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae → Pseudonocardiaceae bacterium	0.91 %
Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	0.91 %
Mycobacterium malmoense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium malmoense	0.91 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.91 %
Euzebyales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090008\|P3_DRAFT_NODE_37943_len_1883_cov_11_507701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1933	Open in IMG/M
2124908041\|P3_CLC_ConsensusfromContig104476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300003315\|P22013IDBA_10027006	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2134	Open in IMG/M
3300003861\|Ga0031654_10048073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1200	Open in IMG/M
3300004782\|Ga0062382_10080457	Not Available	1269	Open in IMG/M
3300005184\|Ga0066671_10561922	Not Available	737	Open in IMG/M
3300005329\|Ga0070683_101183796	Not Available	734	Open in IMG/M
3300005988\|Ga0075160_10076121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1843	Open in IMG/M
3300006032\|Ga0066696_10254586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1135	Open in IMG/M
3300006092\|Ga0082021_1053553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8189	Open in IMG/M
3300006178\|Ga0075367_10928191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300006354\|Ga0075021_10007670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5762	Open in IMG/M
3300006638\|Ga0075522_10249672	Not Available	876	Open in IMG/M
3300007517\|Ga0105045_10939604	Not Available	571	Open in IMG/M
3300007521\|Ga0105044_10393367	Not Available	1252	Open in IMG/M
3300007521\|Ga0105044_10987658	Not Available	645	Open in IMG/M
3300007769\|Ga0102952_1242745	Not Available	578	Open in IMG/M
3300007799\|Ga0105049_10942316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300007982\|Ga0102924_1009262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8630	Open in IMG/M
3300009012\|Ga0066710_101853953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	906	Open in IMG/M
3300009083\|Ga0105047_10058102	All Organisms → cellular organisms → Bacteria	5260	Open in IMG/M
3300009083\|Ga0105047_10110395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	3427	Open in IMG/M
3300009083\|Ga0105047_10123118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3179	Open in IMG/M
3300009083\|Ga0105047_11497934	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300009084\|Ga0105046_10300764	Not Available	1713	Open in IMG/M
3300009084\|Ga0105046_11151265	Not Available	615	Open in IMG/M
3300009360\|Ga0118672_1119572	Not Available	676	Open in IMG/M
3300009773\|Ga0123333_10436558	Not Available	528	Open in IMG/M
3300009868\|Ga0130016_10034842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5928	Open in IMG/M
3300009870\|Ga0131092_10016255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12237	Open in IMG/M
3300009870\|Ga0131092_10074295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	4242	Open in IMG/M
3300009873\|Ga0131077_11769736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300010036\|Ga0126305_10946973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium malmoense	589	Open in IMG/M
3300010379\|Ga0136449_100544290	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1999	Open in IMG/M
3300010403\|Ga0134123_12723053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300012043\|Ga0136631_10181594	Not Available	819	Open in IMG/M
3300012092\|Ga0136621_1379149	Not Available	547	Open in IMG/M
3300012183\|Ga0136624_1157536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	740	Open in IMG/M
3300012527\|Ga0136633_1001885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14987	Open in IMG/M
3300012527\|Ga0136633_1027290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2747	Open in IMG/M
3300012527\|Ga0136633_1043795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2017	Open in IMG/M
3300012527\|Ga0136633_1085826	Not Available	1296	Open in IMG/M
3300012527\|Ga0136633_1110403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	1097	Open in IMG/M
3300012682\|Ga0136611_10022973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	4443	Open in IMG/M
3300012682\|Ga0136611_10050106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2983	Open in IMG/M
3300012684\|Ga0136614_10296373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	1200	Open in IMG/M
(restricted) 3300013125\|Ga0172369_10360510	Not Available	744	Open in IMG/M
(restricted) 3300013132\|Ga0172372_10776235	Not Available	597	Open in IMG/M
3300013769\|Ga0119887_1002503	Not Available	6745	Open in IMG/M
3300014157\|Ga0134078_10484028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300014326\|Ga0157380_10928389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	898	Open in IMG/M
(restricted) 3300014720\|Ga0172376_10789866	Not Available	508	Open in IMG/M
3300015159\|Ga0167630_1001253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5034	Open in IMG/M
3300015161\|Ga0167623_1001614	All Organisms → cellular organisms → Bacteria	8698	Open in IMG/M
3300017695\|Ga0180121_10069602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1250	Open in IMG/M
3300017787\|Ga0183260_10068073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2614	Open in IMG/M
3300017787\|Ga0183260_10559832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → unclassified Pseudonocardiaceae → Pseudonocardiaceae bacterium	738	Open in IMG/M
3300017789\|Ga0136617_10738330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300018429\|Ga0190272_10550175	Not Available	996	Open in IMG/M
3300018429\|Ga0190272_12291524	Not Available	582	Open in IMG/M
3300018469\|Ga0190270_11185427	Not Available	801	Open in IMG/M
3300018476\|Ga0190274_12123205	Not Available	658	Open in IMG/M
(restricted) 3300021517\|Ga0224723_1184525	Not Available	615	Open in IMG/M
3300022467\|Ga0224712_10665089	Not Available	511	Open in IMG/M
3300022556\|Ga0212121_10310283	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300022557\|Ga0212123_10095248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2451	Open in IMG/M
3300025115\|Ga0209835_1165376	Not Available	531	Open in IMG/M
3300026252\|Ga0209722_1098092	Not Available	863	Open in IMG/M
3300026535\|Ga0256867_10106233	Not Available	1079	Open in IMG/M
3300027209\|Ga0209875_1014986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	911	Open in IMG/M
3300027277\|Ga0209846_1034116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	805	Open in IMG/M
3300027781\|Ga0209175_10091723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1303	Open in IMG/M
3300027870\|Ga0209023_10012732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7798	Open in IMG/M
3300027870\|Ga0209023_10012732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7798	Open in IMG/M
3300027894\|Ga0209068_10444690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300027897\|Ga0209254_10199952	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300027902\|Ga0209048_10298774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1129	Open in IMG/M
3300027905\|Ga0209415_10789749	Not Available	663	Open in IMG/M
3300027915\|Ga0209069_10795073	Not Available	564	Open in IMG/M
3300028556\|Ga0265337_1230282	Not Available	504	Open in IMG/M
3300030006\|Ga0299907_10965546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300030010\|Ga0302299_10402340	Not Available	699	Open in IMG/M
3300030114\|Ga0311333_10459905	Not Available	1038	Open in IMG/M
3300030294\|Ga0311349_10370174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1355	Open in IMG/M
3300030619\|Ga0268386_10216439	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300030620\|Ga0302046_11521982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300031228\|Ga0299914_10822052	Not Available	773	Open in IMG/M
3300031228\|Ga0299914_10927932	Not Available	716	Open in IMG/M
3300031234\|Ga0302325_10929185	Not Available	1202	Open in IMG/M
3300031236\|Ga0302324_101315669	Not Available	953	Open in IMG/M
3300031525\|Ga0302326_12054606	Not Available	736	Open in IMG/M
3300031708\|Ga0310686_102128630	Not Available	705	Open in IMG/M
3300031726\|Ga0302321_100216770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Rhabdothermincola → Rhabdothermincola salaria	2009	Open in IMG/M
3300031902\|Ga0302322_101277963	Not Available	892	Open in IMG/M
3300031918\|Ga0311367_10062603	All Organisms → cellular organisms → Bacteria	3981	Open in IMG/M
3300031997\|Ga0315278_10096565	All Organisms → cellular organisms → Bacteria	2971	Open in IMG/M
3300032143\|Ga0315292_10327212	Not Available	1280	Open in IMG/M
3300032143\|Ga0315292_10859558	Not Available	758	Open in IMG/M
3300032163\|Ga0315281_11187113	Not Available	763	Open in IMG/M
3300032401\|Ga0315275_12399515	Not Available	548	Open in IMG/M
3300032420\|Ga0335397_10004958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17492	Open in IMG/M
3300032420\|Ga0335397_10075492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3570	Open in IMG/M
3300032420\|Ga0335397_10462592	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300032456\|Ga0335394_10969733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300032893\|Ga0335069_11427521	Not Available	748	Open in IMG/M
3300033407\|Ga0214472_10125891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	2527	Open in IMG/M
3300034164\|Ga0364940_0000961	All Organisms → cellular organisms → Bacteria	6247	Open in IMG/M
3300034195\|Ga0370501_0268667	Not Available	611	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.27%
Engineered	Engineered	10.00%
Host-Associated	Host-Associated	2.73%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	47.27%
Terrestrial	Environmental → Terrestrial	40.00%
Wastewater	Engineered → Wastewater	8.18%
Plants	Host-Associated → Plants	2.73%
Bioreactor	Engineered → Bioreactor	1.82%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	42.73%
Soil	Environmental → Terrestrial → Soil	30.00%
Peat	Environmental → Terrestrial → Peat	8.18%
Activated Sludge	Engineered → Wastewater → Activated Sludge	4.55%
Sediment	Environmental → Aquatic → Sediment	2.73%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.82%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	1.82%
Anaerobic	Engineered → Bioreactor → Anaerobic	1.82%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.91%
Floodplain	Environmental → Terrestrial → Floodplain	0.91%
Roots	Host-Associated → Plants → Roots	0.91%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.91%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.91%

Habitat	Taxonomy	Distribution
Ice	Environmental → Aquatic → Freshwater → Ice	26.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.55%
Lake	Environmental → Aquatic → Freshwater → Lake	10.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.18%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.55%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.73%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.82%
Sand	Environmental → Terrestrial → Soil → Sand	1.82%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	1.82%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	1.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.91%
Loam	Environmental → Terrestrial → Soil → Loam	0.91%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.91%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.91%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.91%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.45%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	13.64%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	12.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.18%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	5.45%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.45%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	4.55%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.73%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.73%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.82%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.82%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.82%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	1.82%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.91%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.91%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.91%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.91%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.91%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	13.64%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	12.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.18%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	5.45%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	4.55%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.73%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.73%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	2.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.73%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.73%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.82%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.82%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.82%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.82%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.82%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	1.82%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	1.82%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	1.82%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.91%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.91%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.91%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.91%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.91%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.91%
Wastewater Treatment Plant	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater Treatment Plant	0.91%
Anaerobic Wastewater Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Wastewater Sludge	0.91%
Sewage Treatment Plant	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Sewage Treatment Plant	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
3300003315	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P2 sample	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005988	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 C2 DNA	Engineered	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006092	Activated sludge microbial communities from wastewater treatment plant in Ulu Pandan, Singapore	Engineered	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300007517	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-02 (megahit assembly)	Environmental	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300007769	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D1_MG	Environmental	Open in IMG/M
3300007799	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009083	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (megahit assembly)	Environmental	Open in IMG/M
3300009084	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (megahit assembly)	Environmental	Open in IMG/M
3300009360	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C12.But.B IBDA	Engineered	Open in IMG/M
3300009773	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C12 SIP DNA	Engineered	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010293	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 52m metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012183	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ469 (22.06)	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012682	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ223 (23.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300013125 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.25m	Environmental	Open in IMG/M
3300013132 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5m	Environmental	Open in IMG/M
3300013769	Sewage treatment plant microbial communities from Vermont, USA - Sand_B	Engineered	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014720 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35m	Environmental	Open in IMG/M
3300015159	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3C, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015161	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G1B, Ice margin)	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021517 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Balambano_FR2_MetaG	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022556	Kivu_combined assembly	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025115	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 52m metaG (SPAdes)	Environmental	Open in IMG/M
3300026252	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C12 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027781	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 9/18/14 C2 DNA (SPAdes)	Engineered	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031454	Rock endolithic microbial communities from Victoria Land, Antarctica - Siegfried Peak sud	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032420	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)	Environmental	Open in IMG/M
3300032456	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (spades assembly)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_01699280	2088090008	Soil	MERRTDVTTEYDLAVDFMDMTDDRRLWARRADARNGFRAEVGGYVIVGDEDADPRVARIVDIDPDGNIELEVLAGSVEANLGLVTPA
P3_CLC_01204040	2124908041	Soil	MERRTDVTTEYDLAVDFMDMTDDRRLWARRSDARNGFRAEVGGYVIVGDEDADPRVARIVDIDPDGNIELEVLAGSVEANLGLVTPA
P22013IDBA_100270063	3300003315	Ore Pile And Mine Drainage Contaminated Soil	VAETYDIAVDFMDMTDDRRMWVRPADVRREIDLAVGRHLVVGDDDADPKVARIVAIDGDGNLELEVLPGTVESHLDLLAQA*
Ga0031654_100480732	3300003861	Freshwater Lake Sediment	VADDYEIAVDFMDMTTDRHLWARAVDARPDVDVTVGRHVIVGDEDADPKVARIIAVDPDGNLELEVLPGSVESHADLLAPAR*
Ga0062382_100804572	3300004782	Wetland Sediment	MADSYDIAVDFMDMTNDRRLWARAVDARPGVELSVGRHVVVGDEDADPKVARIVAMDADGNVELEVLPGSVESHANRLTPA*
Ga0066671_105619222	3300005184	Soil	MGMEGPAAEPCDVVVDFMDMTDDRRLWVRPADVRSGVVPAVGSHVVVGDEDADPRVARVVATDPDGNVELEVLPGSV
Ga0070683_1011837962	3300005329	Corn Rhizosphere	MADEYDIAVDFMDMTDDRRLWACAVDARPGFAAVVGRYAVVGDDDAELRVARILSVDADGNIELEVLAGAVESHQDLLTSA*
Ga0075160_100761214	3300005988	Wastewater Effluent	MQGQKGFAVTTTHDISVDFMDMTEGRHLWARTTDARPGTRLVVGGHVVVGDDGADPSVARILTIDADGLIELEVLPGTVESHRDLRASAS*
Ga0066696_102545863	3300006032	Soil	MGMEGPAAEPCDVVVDFMDMTDDRRLWVRPADVRSGVVPAVGSHVVVGDEDADPRVARVVATDPDGNVELEVLPGSVESHRDLLTSA*
Ga0082021_10535534	3300006092	Wastewater Treatment Plant	VPNQHDVAVDFMAMTNDDRLWVRATDVRSAFAVEVGCQVVVGDDDADPRVARVVSFDDEGNVELQVLSGSVESHAELLTQA*
Ga0075367_109281911	3300006178	Populus Endosphere	VADDFDIAVDFMDMTNDGRLWVRASDARPGVEIVVGRHVVVGDEDADPKVARIVSVDADGNVELEVLPGSVESHSDLLTLA*
Ga0075021_100076702	3300006354	Watersheds	MHGGFAVPDGYEIALDFMGMTNDRHRWSQTVDARSGAALSMGRHVEVGDEDADSKVARLVAVDAADGNVELEVLPGSVESHSDLLAPA*
Ga0075522_102496722	3300006638	Arctic Peat Soil	MEPGADVTAQYDLAVDFMDMTDARRLWTRRSDARPGFEAVVGGYAIVGDDDADPRVARIIDIDPDGNIELEILDGTVEAHLDLVTPS*
Ga0105045_109396042	3300007517	Freshwater	MEKVSDTQADFEIAVDFMDMTNDRCLWARACDARSGLDLSIGRHVVVGDEDADPRVARIVAVDADGNIRLKVLAGSVESHSDSLASR*
Ga0105044_103933673	3300007521	Freshwater	WDMEGGSAVPDEYEIAVDFMDMTNDRHLWARAVDARPGIELSVGRHVVVGDEDADPKVARVVAVDADGNVELEVLPGSVESHSDLLAPA*
Ga0105044_109876582	3300007521	Freshwater	MEGGSAVPDEYEIAVDFMDMTNDRHLWARAADARPDVELSVGRHVVVGDEDADPKVARIVAVDADGNVELEVLPGSVESHSDLLAPA*
Ga0102952_12427452	3300007769	Soil	MGGGGSAVVDTYDIAVDFMDMTDEQRLWVRAEDARAGFVVEVGRYAVVGDDDADPKVARIVEISSDGNLLLEVLPGPVEAHRDVLARA*
Ga0105049_109423162	3300007799	Freshwater	MAERPPAGCRHDVAVDFMDMTDARRLWARLVDARDGIDLSVGRYVIVGDEDADPRVARIVAVDEDGNLELEVLDGSVESHADLLAPA*
Ga0102924_10092623	3300007982	Iron-Sulfur Acid Spring	VIDTYDVAIDYMDMTDDRHLWVRPADVRRGLKPTVGSHVVVGQEDADPSVARVVAIDDDGFVELEILKGPVAAHRDLLRPT*
Ga0066710_1018539532	3300009012	Grasslands Soil	MGMEGPAAEPCDVVVDFMDMTDDRRLWVRPADVRSGVVPAVGSHVVVGDEDADPRVARVVATDPDGNVELEVLPGSVESHRDLLTSA
Ga0105047_100581022	3300009083	Freshwater	MEEGSAVNDDYEIAIDFMDMTNGGHLWARASDARLSVGMFVGRHVVVGDEDADSRVARIVSIDADGNFELVVLSGSVESHSDLLAPASSNVSASSVVIGPSG*
Ga0105047_101103952	3300009083	Freshwater	MEGGSAVPDEYEIAVDFMDMTNDRHLWARAADARSDVELSVGRHVVVGDEDADPKVARIVAVDADGNVELEVLPGSVESHSDLLAPA*
Ga0105047_101231181	3300009083	Freshwater	VACGEIEGGPTVADDVEIAVDFMDMTNDRRLWTRAADTRPGVELAVGRHVVVGDEEADPKVARIAAIDADGNVELEILPGSVASPSDLLAPA*
Ga0105047_114979342	3300009083	Freshwater	LEDVEAGADMPTQYEIAVDFMDMTNDRRLWARSADARPGLSLSVGRHAVVGDDDADSKVARIVAVDADGNVELEVLPGSV
Ga0105046_103007643	3300009084	Freshwater	MEGGSAVPDEYEIAVDFMGMTNDRRLWARASDARPDLELSVGRHVVVGDEDADPKVARIVAVDADGNVELEVLPGSVESHSDLLAPA*
Ga0105046_111512652	3300009084	Freshwater	VADTYDIAVDFMDMTDDLLVWARPADLRRGVDASVGRHVVVGDEDADPKVARIVAVDADGNLELEVLPGTVESHVDLLAPA*
Ga0118672_11195722	3300009360	Anaerobic Wastewater Sludge	VTDTHDIAVDFMDMTDDHRLWARASDVREGFEPAVGRYAIVGDDDADPRAARIEDITDDGLLHLEVLPGPIEAHRDVLARA*
Ga0123333_104365581	3300009773	Anaerobic Biogas Reactor	VTDTHDIAVDFMDMTDDHRLWARASDVREGFEPAVGRYAIVGDDDADPRAARIEDITDDGLLHLEVLPGP
Ga0130016_100348424	3300009868	Wastewater	VADGWYLVADTYDIAVDFMDMTNDLRLWARPADLRPGFDASVGVHVVVGDEDAEPRVARVVAIDPDGNLELQVLPGSVESHRDLLARV*
Ga0131092_1001625511	3300009870	Activated Sludge	VTDIPDVIVDFMDMTDDHRLWTRVCDVCSDFEPAVGRYAIVGDEDADARVARIENITDDGLLRLEVLPGPIEAYRNVLARA*
Ga0131092_100742954	3300009870	Activated Sludge	VHDEYEIAVDFMDMTDERHLWARAADARPGIALSIGRHVVVGDEDADSKVARIVAIDADGNVELEVLPGSVESHSDLLAPA*
Ga0131077_117697362	3300009873	Wastewater	VPDEFEIAVDFMDMTDDRHLWARAADVRPGLELQVDRYVVVGDDDADPRVARVVAVDTDGNVELEVLPGSVESHADLLTPA*
Ga0126305_109469732	3300010036	Serpentine Soil	VADAYDIAVDFMDMTDDRRPWARPTDVRRDIDVGVGRHVVVGDVDADPKVARIVSIDSDGNLELEVLPGTFESHLDLLAPA*
Ga0116204_12727742	3300010293	Anoxic Lake Water	VADEYGIAVDFMDMTDDRRLWARAADVRPGVELVVGRHVVVGDEDAEPKVARIVAVDSDDNVELEIL
Ga0136449_1005442902	3300010379	Peatlands Soil	VTDTYDVAVDYMDMTDDRHLWVRPADVRPGLSPTVGSHVIVGQEDADPSVARVVAIDDDGFLELEILPGPVEAHLDLL*
Ga0134123_127230532	3300010403	Terrestrial Soil	MADTYDIAGDFMDMTDDRRLWVRPVDVRRDVDLAVGRHLVVGDEDADPKVARIVAIDGDGNLELEVLPGTVESHLDLLAQA*
Ga0136631_101815941	3300012043	Polar Desert Sand	VPETYDIAVDFMDMTDDRRLWVRPADARPGLDPIVGRHVVVGDEDADPRVARILMVDADGNLELEVLPGTVESHLDLLAPA*
Ga0136621_13791491	3300012092	Polar Desert Sand	LIDVKEELEMANYDLAVDFMDMTDDRRLWTRAVDARDGFHAVEGRYAIVGDDDAEPRVARVVAIDGDGNIELEVLLGTVESHQDLLTPA*
Ga0136624_11575361	3300012183	Polar Desert Sand	ASAGRAEESDTVAGVPWPREGAALTDRYDIAVDFMDMTNDRRMWVRAVDARSGVELAVGRHVIVGDDDADPRVAQIVTIDAEGNVELMVLAGSVEPHQDLLARA*
Ga0136633_100188515	3300012527	Polar Desert Sand	MEGAPVVTVHYDIAVDFMDMTNDRRLWARAADARLGVELTVGRHAIVGDDDADPKVARIVAIDADGNVELEVLPGSVESHLDLLAPA*
Ga0136633_10272902	3300012527	Polar Desert Sand	MEGGGAVPEMNDIAVDFMDMTNDRRLWVRAADARPGLDPIVGRHVVVGDEDADPRVARILMVDADGNLELEVPPAPSSPTSTCSLQPE*
Ga0136633_10437953	3300012527	Polar Desert Sand	MEGVNAVPETYDIAVDFMDMTNGHRLWARAADARPGLDLTVGGHVVVGDEDADARVARIVSVDADGNLELEVLAGTVEAHLDLVAPA*
Ga0136633_10858262	3300012527	Polar Desert Sand	VTDTYDIAVDFMDMTDDRRLWARASDARPGFEPAVGAHVVVGDEDADPRVAQIVSMDSDGNLELEVLPGTVASHQDLLARA*
Ga0136633_11104032	3300012527	Polar Desert Sand	VPETYDIAVDFMDMTDDRRLWVRPADVRPGLDPIVGRHVVVGDEDADPRVARILMVDADGNLELEVLPGTVESHLDLLAPA*
Ga0136611_100229734	3300012682	Polar Desert Sand	VNDTYDIAVDFMDMTDDRHLWARAADARPGFKPAVGVHAVVGDDDADPRVAQIIAIDADGNVELEVLPGTVESHYDLLARA*
Ga0136611_100501064	3300012682	Polar Desert Sand	VPETYDIAVDFMDMTDDRRLWVRPADARPGLDLIVGRHVVVGDEDADPRVARILMVDADGNLELEVLPGTVESHLDLLAPA*
Ga0136614_102963732	3300012684	Polar Desert Sand	MEGGSAVPETYDIAVDFMDMTDDRRLWVRAADTRPGLDPIVGRHVVVGDEDADPRVARILMVDADGNLELEVLPGTVESHLDLLAPA*
(restricted) Ga0172369_103605102	3300013125	Freshwater	VADEYGIAVDFMDMTDDRRLWARAADVRPGVELVVGRHVVVGDEDAEPKVARIVAVDSDDNVELEILPGSVENHSDLLEPA*
(restricted) Ga0172372_107762352	3300013132	Freshwater	DMTDDRRLWARAADVRPGVELVVGRHVVVGDEDAEPKVARIVAVDSDDNVELEILPGSVENHSDLLEPA*
Ga0119887_10025032	3300013769	Sewage Treatment Plant	VTVPHDISVDFMDMTDDRRLWARTADARPGTRLSVGSHVVVGDDGADPSVARILTIDGDGLIELEVLPGTVESHQDVLASAS*
Ga0134078_104840281	3300014157	Grasslands Soil	PVALMGMEGPAAERCDVVVDFMDMTDARRLWVRPADLRSGVVPAVGSHVVVGDEDADPRVARVVATDPDGNVELEVLPGSVESHRHLLTSA*
Ga0157380_109283892	3300014326	Switchgrass Rhizosphere	VADDFDIAVDFMDMTNDGRLWVRASDARPGVEIVLGRHVVVGDEDADPKVARIVSVDADGNVELEVLPGSVESHSDLLTLA*
(restricted) Ga0172376_107898662	3300014720	Freshwater	ADEYGIAVDFMDMTDDRRLWARAADVRPGVELVVGRHVVVGDEDAEPKVARIVAVDSDDNVELEILPGSVENHSDLLEPA*
Ga0167630_10012535	3300015159	Glacier Forefield Soil	LAAGYDIAVDFMDMTDDRRLWTRSVDARTGVDTRVDRYVIVGDDDADPRVARIIARDAEGNIELEVLPGSVESHHDLLTPA*
Ga0167623_10016144	3300015161	Glacier Forefield Soil	LAAGYDIAVDFMDMTDDRRLWTRSVDARAGVDTSVDRYVIVGDDDADPKVARIIARDAEGNIELEVLPGSVESHHDLLTPA*
Ga0180121_100696022	3300017695	Polar Desert Sand	MTEETHRVADIFDISVDFMDMTNDLRLWARPADLRSGFEPSVGRHAVVGDEDADPKVARIVAIDPDGNLELQILPGSVESHRDLLARV
Ga0183260_100680735	3300017787	Polar Desert Sand	MANYDLAVDFMDMTDDRRLWTRAVDARDGFHAVEGRYAIVGDDDAEPRVARVVAIDGDGNIELEVLLGTVESHQDLLTPA
Ga0183260_105598321	3300017787	Polar Desert Sand	VADTHDIAVDFMDMTNDLRLWARPVDLRPGFEPSVGVHAVVADEDAEPKVARIVAIDPDGNLELQVLAGSVESHRDLLARV
Ga0136617_107383302	3300017789	Polar Desert Sand	MTEETHRVADTFDVAVDFMDMTNDLRLWARPADLRSGFEPSVGRHAVVGDEDADPKVARIVAIDPDGNLELQILPGSVESHRDLLARV
Ga0190272_105501752	3300018429	Soil	MAETYDINVEFMDMTNDRRLWVRAEDARPGFVAEVGRHVVVGDEDADPRVARIVEIGSDGHLQLEVLPGPIEAHRDVLARA
Ga0190272_122915241	3300018429	Soil	MADTYDINVDFMDMTNDRRLWVRAEDARPGFVAEVGRYVIVGDDDADPRVARIVEIGSDGHLHLEVLPGPLEAHRDALARA
Ga0190270_111854272	3300018469	Soil	DAYDIAVDFMDMTNDMRLWVRTVDVRGGFEPAVGRHAIVGDDDADPKVARIVAIDAEGNLELQVLRGSVESHLDLLAQA
Ga0190274_121232052	3300018476	Soil	VSDAYDIAVDFMDMTNDMRLWVRAVDVRGGFEPAVGRHAIVGDDDADPKVARIVAIDAEGNLELQVLRGSVESHLDLLAQA
(restricted) Ga0224723_11845252	3300021517	Freshwater Sediment	MDYTYDIAVDFMDMTDDRRLWVRAEDARADFVVEVGRYAVVGDDDADPKVARIVEISSDGDLLLEVLPGPVEAHRDVLARA
Ga0224712_106650891	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	GVSAQYDLAVDFMDMTDARRLWTRHSDARPGFHPKVGGYAIVGDDDADPRVARIIDIDPDGNIELEVLDGTVEAHLDLVTPA
Ga0212121_103102833	3300022556	Anoxic Lake Water	VHEDKGPVVADEYGIAVDFMDMTDDRRLWARAADVRPGVELVVGRHVVVGDEDAEPKVARIVAVDSDDNVELEILPGSVENHSDLLEPA
Ga0212123_100952483	3300022557	Iron-Sulfur Acid Spring	VIDTYDVAIDYMDMTDDRHLWVRPADVRRGLKPTVGSHVVVGQEDADPSVARVVAIDDDGFVELEILKGPVAAHRDLLRPT
Ga0209835_11653761	3300025115	Anoxic Lake Water	VHEDKGPVVADEYGIAVDFMDMTDDRRLWARAADVRPGVELVVGRHVVVGDEDAEPKVARIVAVDSDDNVELEIL
Ga0209722_10980922	3300026252	Anaerobic Biogas Reactor	VTDTHDIAVDFMDMTDDHRLWARASDVREGFEPAVGRYAIVGDDDADPRAARIEDITDDGLLHLEVLPGPIEAHRDVLARA
Ga0256867_101062332	3300026535	Soil	VAITYDIAVDFMDMTNDLRLWARPADLRPGFEPSVGVHVVVGDEDADPKVARIVAIDPDGNLELQILSGSVESHRDLLARA
Ga0209875_10149861	3300027209	Groundwater Sand	LVGDPAGSLAAEKGGSVVADSCDIAVDFMDMTNDRRLWARPADLRGGFAPVVGRYAIVGDDDADPKVARIVAIDADGNLELEVLPGSVESHLDLLAQA
Ga0209846_10341161	3300027277	Groundwater Sand	VADSCDIAVDFMDMTNDRRLWARPADLRGGFAPVVGRYAIVGDDDADPKVARIVAIDADGNLELEVLPGSVESHLDLLAQA
Ga0209175_100917233	3300027781	Wastewater Effluent	MQGQKGFAVTTTHDISVDFMDMTEGRHLWARTTDARPGTRLVVGGHVVVGDDGADPSVARILTIDADGLIELEVLPGTVESHRDLRASAS
Ga0209023_100127321	3300027870	Freshwater And Sediment	VADDFEIAVDFMDMTTDRHVWVRSADARPGVEVAAGRYVVVGDEDADPKVARIVGIDDDGNVELEVLQGSVESHADLLTLA
Ga0209023_100127326	3300027870	Freshwater And Sediment	VPDEYEIAVDFMDMTNDRHLWARAADARPDLELSVGRHVVVGDEDADPKVARIVAVDADGNVELEVLPGSVESHSDLLAPA
Ga0209068_104446901	3300027894	Watersheds	VPDDYEIAVDFMDMTNDRHLWTRAADARPGVELTVGRHVVVGDEDADSKVARIVAVDGDGNVELEVLPGSVESHSDLLAPA
Ga0209254_101999523	3300027897	Freshwater Lake Sediment	VADEYDIAVDFMDMTDDRRLWARAVDARGGFEPVVGRHAIVGDEDADPKVARIVAVDADGNLELEVLSGSVESHLELLARA
Ga0209048_102987742	3300027902	Freshwater Lake Sediment	LEMKGGPAVADDYEIAVDFMDMTTDRHLWARAVDARPDVDVTVGRHVIVGDEDADPKVARIIAVDPDGNLELEVLPGSVESHADLLAPAR
Ga0209415_107897491	3300027905	Peatlands Soil	VTDTYDVAVDYMDMTDDRHLWVRPADVRPGLGPTVGSHVIVGQEDADPSVARVVAIDDDGFLELEILPGPVEAHLDLL
Ga0209069_107950732	3300027915	Watersheds	VADAFDIAVDFMDMTNDRHLWVRTADVRPGVQIAVGRHVVVGDDDADPKVARVVAVDGDGNVELEVLTGSVESHADLLTPA
Ga0265337_12302821	3300028556	Rhizosphere	GTRRNNRWMDDEYDVAVDFMDMTNHRRLWVRIDDARPGVDLAVGRHVVVGDDDAEPKVARIVSIDHDGNRELLVLPGTVVSNCDLLPRS
Ga0299907_109655461	3300030006	Soil	VADSYDIAVDFMDMTNDMRLWVRAVDVRGGFEPAVGRHAIVGDDDADPKVARIVAIDAEGNLELQVLPGSVESHLDLLAQA
Ga0302299_104023401	3300030010	Fen	MGGRPVADTYDIAVDFMDMTDDRRLWVRTEDARAGFVVEVGRYAVVGDDDADPKVARIVEISSDGNLLLEVLPGPVEAHRDVLARA
Ga0311333_104599052	3300030114	Fen	VADAYDIAVDFMDMTDDRRLWVRTEDARAGFVVEVGRYAVVGDDDADPKVARIVEISSDGNLLLEVLPGPVEAHRDVLARA
Ga0311349_103701743	3300030294	Fen	MDDYDIAVDFMDMTDARRLWVRAADARPGVTLTVGRHVIVGDEDADPRVARIVGVGDDGIIELEVLPGDVESHRDLVAPA
Ga0268386_102164393	3300030619	Soil	DFMDMTNDLRLWARPADLRPGLEPSVGRHVVVGDEDAEPRGARIVAIDPEGNLDLQVLPGSVS
Ga0302046_115219821	3300030620	Soil	AVDFMDMTDDRRLWARPVDVRAGIEVTIGRHLIVGDDDADPKVARIVALDSDGNIELEVLPGSVESHAHLLTLA
Ga0299914_108220521	3300031228	Soil	VSHAYDIAVDFMDMTNDMRLWVRAVDVLGEFEPAVGRHAIVGDDDAEPKVARIVAIDAEGNLELQVLRGS
Ga0299914_109279322	3300031228	Soil	MVAPYDIAVDFMDMTDDRRVWVRAADVREGIEVIVGQHVVVGDDDADARVARVLAVDEGGNIHLEILPGAVESHTDLLTRS
Ga0302325_109291853	3300031234	Palsa	MEGGTAVPDTDDIAVDFMDMTDDRGLWARPADTRPGFEAVVGRHVVVGDDDADPRVARIVAIDDDGNLELKVLPGGVDSHLDLLAPA
Ga0302324_1013156691	3300031236	Palsa	VPDTYDIAVDFMDMTDDRGLWARPADTRPGFEAVVGRHVVVGDDDADPRVARIVAIDDDGNLELKVLPGGVDSHLDLLAPA
Ga0272427_10093151	3300031454	Rock	MSDHYDVAVDFMDMTDGHRLWARPADARAGIDLVAGRHVIVGDEDADSRVARIVAVDEDGNLDLEVLDGSV
Ga0302326_120546062	3300031525	Palsa	LSEMEGGTAVPDTYDIAVDFMDMTDDRGLWARPADTRPGFEAVVGRHVVVGDDDADPRVARIVAIDDDGNLELKVLPGGVDSHLDLLAPA
Ga0310686_1021286302	3300031708	Soil	VSGAYDISVDYMDMTNDRHLWVRSADARPGFEVFAGRHVIVGDDGADPKVARIVAVDADGNIELEVLSGSVESHADLLTSA
Ga0302321_1002167704	3300031726	Fen	MDDYDIAVDFMDMTDARRLWVRAADVRPGVTLTVGRHVIVGDEDADPRVARIVGVGDDGIIELEVLPGDVESHRDLVAPA
Ga0302322_1012779631	3300031902	Fen	TDARRLWVRAADARPGVTLTVGRHVIVGDEDADPRVARIVGVGDDGIIELEVLPGDVESHRDLVAPA
Ga0311367_100626036	3300031918	Fen	MTGRNGGSAVADAYDIAVDFMDMTDDRRLWVRTEDARAGFVVEVGRYAVVGDDDADPKVARIVEISSDGNLLLEVLPGPVEAHRDVLARA
Ga0315278_100965652	3300031997	Sediment	VSRVYDLAVDFMDMSDDRRLWTRSVDAVSDVKLIPGHHVIVGDDDADAKVARIISMDVDGNIELEVLQGSVESHYDLLTTA
Ga0315292_103272122	3300032143	Sediment	VPDDYEVAVDFMDMTNDRHLWARAADARPGIELSVGRHVVVGDEDADSKVARIVAIDADGNIELEVLPGSFESNSDLVAPG
Ga0315292_108595582	3300032143	Sediment	VSRVYDLAVDFMDMSDDRRLWTRSVDAVSDVKLIPGHHVIVGDDDADAKVARIISVDVDGNIELEVLQGSVESHYDLLTTA
Ga0315281_111871131	3300032163	Sediment	MVTGGAIVSRVYDLAVDFMDMSDDRRLWTRSVDAVSDVKLIPGHHVIVGDDDADAKVARIISVDVDGNIELEVLQGSVESHYDLLTTA
Ga0315275_123995151	3300032401	Sediment	VSRVYDLAVDFMDMSDDRRLWTRSVDAVSDVKLIPGHHVIVGDDDADAKVARIISMDVDGNTELEVLQGSVESHYDLLTTA
Ga0335397_1000495811	3300032420	Freshwater	MEEGSAVNDDYEIAIDFMDMTNGGHLWARASDARLSVGMFVGRHVVVGDEDADSRVARIVSIDADGNFELVVLSGSVESHSDLLAPASSNVSASSVVIGPSG
Ga0335397_100754921	3300032420	Freshwater	VADDVEIAVDFMDMTNDRRLWTRAADTRPGVELAVGRHVVVGDEDADPKVARIAAIDADGNVELEILPGSVASPSDLLAPA
Ga0335397_104625921	3300032420	Freshwater	VPDEYEIAVDFMDMTNDRHLWARAADARPDLELSVGRHVVVGDDDADPKVARIVAVDGDGNVELEVLPGSVESHSDLLAPA
Ga0335394_109697331	3300032456	Freshwater	VPDEYEIAVDFMGMTNDRRLWARASDARPDLELSVGRHVVVGDEDADPKVARIVAVDADGNVELEVLPGSVESHSDLLAPA
Ga0335069_114275211	3300032893	Soil	MGSVRYDLAVDFMDMTAARRLWTRRADARPGFEVKVGGYAIVGDDDADPRVARIVDIDPDGNIELEVLDGTVEAHLDLVTPA
Ga0214472_101258913	3300033407	Soil	LKDLEVGTSVPGTYDIAVDFIDMTDDRYLWVRATDARPGFEAVVGGRAVIGDEDADPRVARIVAIDDDGNLELEVLPAAVETYLDLLARA
Ga0364940_0000961_530_799	3300034164	Sediment	MAMEGGSAVPGDYAIAVDYMDMTNDRHLWARAADARPGIELSVGRHMVVGDEDADPKVARIVAVDADGNVELEVLPGSVESHSDLLAPA
Ga0370501_0268667_138_401	3300034195	Untreated Peat Soil	MECSVHVPTKYDLSVDFMDMTADRRLLARRVDARRGFCAEVGGYAIVGDEDAEPRVARIVDIDSDGNIELEILAGSVEANRGLLAPN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters