NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F087424

Metagenome / Metatranscriptome Family F087424

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087424
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 48 residues
Representative Sequence VDVFDPVAYAASLLVIVTSCALAVSVPALRAARIDPIATLRKD
Number of Associated Samples 90
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 6.67 %
% of genes near scaffold ends (potentially truncated) 84.55 %
% of genes from short scaffolds (< 2000 bps) 88.18 %
Associated GOLD sequencing projects 85
AlphaFold2 3D model prediction Yes
3D model pTM-score0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (74.545 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(16.364 % of family members)
Environment Ontology (ENVO) Unclassified
(25.455 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(55.455 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 52.11%    β-sheet: 0.00%    Coil/Unstructured: 47.89%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.50
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF13460NAD_binding_10 10.00
PF12704MacB_PCD 4.55
PF12833HTH_18 4.55
PF03551PadR 2.73
PF07676PD40 2.73
PF02687FtsX 2.73
PF03786UxuA 1.82
PF00679EFG_C 1.82
PF01161PBP 1.82
PF13419HAD_2 1.82
PF12706Lactamase_B_2 1.82
PF09084NMT1 1.82
PF04020Phage_holin_4_2 0.91
PF02894GFO_IDH_MocA_C 0.91
PF04545Sigma70_r4 0.91
PF08241Methyltransf_11 0.91
PF01252Peptidase_A8 0.91
PF13632Glyco_trans_2_3 0.91
PF12681Glyoxalase_2 0.91
PF03764EFG_IV 0.91
PF01381HTH_3 0.91
PF00109ketoacyl-synt 0.91
PF13551HTH_29 0.91
PF00144Beta-lactamase 0.91
PF07969Amidohydro_3 0.91
PF00528BPD_transp_1 0.91
PF08327AHSA1 0.91
PF02371Transposase_20 0.91
PF05685Uma2 0.91
PF11138DUF2911 0.91
PF00174Oxidored_molyb 0.91
PF00293NUDIX 0.91
PF13432TPR_16 0.91
PF07617DUF1579 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 2.73
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 2.73
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 2.73
COG0597Lipoprotein signal peptidaseCell wall/membrane/envelope biogenesis [M] 1.82
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.82
COG1881Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) familyGeneral function prediction only [R] 1.82
COG1312D-mannonate dehydrataseCarbohydrate transport and metabolism [G] 1.82
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.82
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.91
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.91
COG0673Predicted dehydrogenaseGeneral function prediction only [R] 0.91
COG1950Uncharacterized membrane protein YvlD, DUF360 familyFunction unknown [S] 0.91
COG2041Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductasesEnergy production and conversion [C] 0.91
COG2367Beta-lactamase class ADefense mechanisms [V] 0.91
COG3547TransposaseMobilome: prophages, transposons [X] 0.91
COG3915Uncharacterized conserved proteinFunction unknown [S] 0.91
COG0480Translation elongation factor EF-G, a GTPaseTranslation, ribosomal structure and biogenesis [J] 0.91
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 0.91


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms74.55 %
UnclassifiedrootN/A25.45 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002070|JGI24750J21931_1045189All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus677Open in IMG/M
3300002073|JGI24745J21846_1008520All Organisms → cellular organisms → Bacteria1156Open in IMG/M
3300002124|C687J26631_10000662All Organisms → cellular organisms → Bacteria14140Open in IMG/M
3300004156|Ga0062589_101091528All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300004156|Ga0062589_101321069All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300004463|Ga0063356_101431617All Organisms → cellular organisms → Bacteria1019Open in IMG/M
3300004463|Ga0063356_104779318All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300004463|Ga0063356_105240460All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300004463|Ga0063356_105726322All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae533Open in IMG/M
3300004480|Ga0062592_100581350All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300005290|Ga0065712_10749044All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300005294|Ga0065705_10816628All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300005328|Ga0070676_11610710Not Available502Open in IMG/M
3300005347|Ga0070668_101443379All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300005354|Ga0070675_100304139All Organisms → cellular organisms → Bacteria1406Open in IMG/M
3300005364|Ga0070673_102321139Not Available510Open in IMG/M
3300005456|Ga0070678_101449998All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300005549|Ga0070704_100586693All Organisms → cellular organisms → Bacteria978Open in IMG/M
3300005577|Ga0068857_100449924All Organisms → cellular organisms → Bacteria1204Open in IMG/M
3300005578|Ga0068854_101896871All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300005615|Ga0070702_100151100All Organisms → cellular organisms → Bacteria1491Open in IMG/M
3300005713|Ga0066905_101631045All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae591Open in IMG/M
3300005719|Ga0068861_101599584All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300006194|Ga0075427_10036781All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300006358|Ga0068871_102171649Not Available529Open in IMG/M
3300006579|Ga0074054_11881840All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae831Open in IMG/M
3300006755|Ga0079222_12486966All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300006844|Ga0075428_100429811All Organisms → cellular organisms → Bacteria1415Open in IMG/M
3300006846|Ga0075430_100971564All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300006852|Ga0075433_11050662All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300006852|Ga0075433_11299760All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300006894|Ga0079215_10631907Not Available706Open in IMG/M
3300006914|Ga0075436_101051303All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300007004|Ga0079218_13808335All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300009038|Ga0099829_11756462All Organisms → cellular organisms → Bacteria → Proteobacteria508Open in IMG/M
3300009078|Ga0105106_10691021All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21729Open in IMG/M
3300009078|Ga0105106_11375525Not Available501Open in IMG/M
3300009094|Ga0111539_10075669All Organisms → cellular organisms → Bacteria3965Open in IMG/M
3300009094|Ga0111539_10269787All Organisms → cellular organisms → Bacteria1981Open in IMG/M
3300009094|Ga0111539_11514920All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium778Open in IMG/M
3300009094|Ga0111539_11729375Not Available725Open in IMG/M
3300009146|Ga0105091_10460825All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium640Open in IMG/M
3300009147|Ga0114129_10983883All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1063Open in IMG/M
3300009147|Ga0114129_11634662All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium788Open in IMG/M
3300009148|Ga0105243_12597156All Organisms → cellular organisms → Bacteria → Acidobacteria546Open in IMG/M
3300009156|Ga0111538_14134447Not Available501Open in IMG/M
3300009162|Ga0075423_12563802All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium557Open in IMG/M
3300009553|Ga0105249_10649285All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1113Open in IMG/M
3300010329|Ga0134111_10222724Not Available768Open in IMG/M
3300010362|Ga0126377_13167761Not Available531Open in IMG/M
3300010398|Ga0126383_10820279All Organisms → cellular organisms → Bacteria1014Open in IMG/M
3300011119|Ga0105246_10102344All Organisms → cellular organisms → Bacteria2088Open in IMG/M
3300012204|Ga0137374_10159124All Organisms → cellular organisms → Bacteria2004Open in IMG/M
3300012499|Ga0157350_1010839All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300012915|Ga0157302_10311618Not Available615Open in IMG/M
3300013308|Ga0157375_10240469All Organisms → cellular organisms → Bacteria1970Open in IMG/M
3300014154|Ga0134075_10415217All Organisms → cellular organisms → Bacteria → Acidobacteria595Open in IMG/M
3300014326|Ga0157380_13244690All Organisms → cellular organisms → Bacteria → Acidobacteria520Open in IMG/M
3300015201|Ga0173478_10686901All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300015256|Ga0180073_1111033All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium591Open in IMG/M
3300018053|Ga0184626_10354549All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium597Open in IMG/M
3300018063|Ga0184637_10531912All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300018429|Ga0190272_11520555All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300018429|Ga0190272_11789157All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300018429|Ga0190272_12096675All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300018432|Ga0190275_10961330All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium924Open in IMG/M
3300018469|Ga0190270_11023099All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium854Open in IMG/M
3300018469|Ga0190270_11157128All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300019377|Ga0190264_10669011Not Available759Open in IMG/M
3300021080|Ga0210382_10017398All Organisms → cellular organisms → Bacteria2551Open in IMG/M
3300025919|Ga0207657_10214497Not Available1543Open in IMG/M
3300025926|Ga0207659_11493541Not Available578Open in IMG/M
3300025930|Ga0207701_11538388Not Available537Open in IMG/M
3300025937|Ga0207669_10382596All Organisms → cellular organisms → Bacteria1097Open in IMG/M
3300025938|Ga0207704_10928013All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300026067|Ga0207678_11459367Not Available604Open in IMG/M
3300026075|Ga0207708_10091108All Organisms → cellular organisms → Bacteria2351Open in IMG/M
3300026118|Ga0207675_100008079All Organisms → cellular organisms → Bacteria9913Open in IMG/M
3300026320|Ga0209131_1369724All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300027717|Ga0209998_10044497All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300027979|Ga0209705_10078894All Organisms → cellular organisms → Bacteria → Acidobacteria1803Open in IMG/M
3300028809|Ga0247824_11013915All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium526Open in IMG/M
3300028812|Ga0247825_10264198All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium1198Open in IMG/M
3300031229|Ga0299913_11316719Not Available679Open in IMG/M
3300031547|Ga0310887_11023983Not Available527Open in IMG/M
3300031562|Ga0310886_10114503All Organisms → cellular organisms → Bacteria1366Open in IMG/M
3300031740|Ga0307468_102235490Not Available530Open in IMG/M
3300031908|Ga0310900_10905789All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium720Open in IMG/M
3300031940|Ga0310901_10208895All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300031943|Ga0310885_10699322Not Available569Open in IMG/M
3300031944|Ga0310884_10021452All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2612Open in IMG/M
3300032002|Ga0307416_103883681Not Available500Open in IMG/M
3300032003|Ga0310897_10249412All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae794Open in IMG/M
3300032017|Ga0310899_10061107All Organisms → cellular organisms → Bacteria1414Open in IMG/M
3300032017|Ga0310899_10118335All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1094Open in IMG/M
3300032075|Ga0310890_10645930All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium823Open in IMG/M
3300032075|Ga0310890_11548339Not Available547Open in IMG/M
3300032122|Ga0310895_10132914All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1055Open in IMG/M
3300032122|Ga0310895_10782895All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium501Open in IMG/M
3300032144|Ga0315910_10135372All Organisms → cellular organisms → Bacteria → Acidobacteria1828Open in IMG/M
3300032179|Ga0310889_10167918All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi994Open in IMG/M
3300032179|Ga0310889_10206207All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium911Open in IMG/M
3300032179|Ga0310889_10215919Not Available893Open in IMG/M
3300033416|Ga0316622_100428328Not Available1493Open in IMG/M
3300034147|Ga0364925_0365168All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium545Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil16.36%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere15.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.09%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere5.45%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.64%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.73%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.73%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.73%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.82%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.82%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.82%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.82%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.82%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.82%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.82%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.82%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.91%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.91%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.91%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.91%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.91%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.91%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.91%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.91%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.91%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.91%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002070Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4Host-AssociatedOpen in IMG/M
3300002073Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4Host-AssociatedOpen in IMG/M
3300002124Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006194Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012499Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015256Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10DEnvironmentalOpen in IMG/M
3300017695Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027979Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI24750J21931_104518923300002070Corn, Switchgrass And Miscanthus RhizosphereIVLRATPLAAEIGDSVDVFDPVAYAASALIIATACLIAVSIPALRAARIDPIATLRKD*
JGI24745J21846_100852013300002073Corn, Switchgrass And Miscanthus RhizosphereVLRATPLAAEIGDSVDVFDPVAYAASALIIATACLIAVSIPALRAARIDPIATLRKD*
C687J26631_1000066223300002124SoilVAYAASALVIATACLIAMSVPILRAASVDPIATLRKD*
Ga0062589_10109152823300004156SoilSVDVFDPVAYAASALIIATACLIAVSIPALRAARIDPIATLRKD*
Ga0062589_10132106923300004156SoilLMASPFASEIGDVVHVFDPLAYAASVLVIAAACLLAVSVPALRAARIDPIATLRND*
Ga0063356_10025775113300004463Arabidopsis Thaliana RhizosphereAGTGLAAAVATLLLSTPAASEIGSLVHVLDPVAYITGVLVIASACLLASSLPMLRAARIDPIAALRNE*
Ga0063356_10143161723300004463Arabidopsis Thaliana RhizosphereAIVLMATPVAAEIGSLVNVFDPVAYTASLLCIGTACVLAASIPALRAARIDPIATLRQD*
Ga0063356_10477931823300004463Arabidopsis Thaliana RhizosphereDPVAYAASALVIVASCMLAVSVPALRAARIDPIVTLRMD*
Ga0063356_10524046013300004463Arabidopsis Thaliana RhizosphereDPLAYAASVLVIAAACLLAVSVPALRAARIDPIATLRND*
Ga0063356_10572632223300004463Arabidopsis Thaliana RhizosphereSPFASEIGDAVHVFDPLAYFASVLVIAAACLLGVSVPALRAARIDPIAALRKD*
Ga0062592_10058135023300004480SoilDVFDPAAYAASALVIATACLIAVSVPTLRAARIDPIATLRKD*
Ga0065712_1074904413300005290Miscanthus RhizosphereVLDPAAYGVSVITIVTSCALAVSVPALRAARIDPIATLRKD*
Ga0065705_1081662833300005294Switchgrass RhizosphereAASEIGGVVKVFDPVAYAASLLVIITSCALAVSVPALRAARIDPIAMLRKD*
Ga0070676_1161071013300005328Miscanthus RhizosphereDVFDPVAYAGSLLVIVTSCALAVSVPALRATRIDPIATLKKE*
Ga0070668_10144337913300005347Switchgrass RhizosphereVDVFDPVAYAASLLVIVTSCALAVSVPALRAARIDPIATLRKD*
Ga0070675_10030413913300005354Miscanthus RhizosphereVQVFDPVAYAASLLVIVTSCVLAASVPALRAARIDPIATLRKD*
Ga0070673_10232113913300005364Switchgrass RhizosphereVAIVLMATPAASETGGVIDVFDPVAYAASALVIATACLIAVSVPTLRATRIDPIATLRKD
Ga0070678_10144999823300005456Miscanthus RhizosphereGASEIGDWVHVLDPAAYGVSVMTIVTSCALAVSVPALRAARIDPIATLRKD*
Ga0070704_10058669323300005549Corn, Switchgrass And Miscanthus RhizosphereIGDWVHVLDPVAYGTSALTIVMSSALAVSVPALRAARIDPIATLRKD*
Ga0068857_10044992433300005577Corn RhizospherePVAYAASALIIATACLIAVSIPALRAARIDPIATLRKD*
Ga0068854_10189687123300005578Corn RhizospherePGASEIGDWVHVLDPAAYGVSVMTIVTSCALAVSVPALRAARIDPIATLRKD*
Ga0070702_10015110043300005615Corn, Switchgrass And Miscanthus RhizosphereDPVAYAASALIIATACLIAVSIPALRAARIDPIATLRKD*
Ga0066905_10163104523300005713Tropical Forest SoilALDDSGEVGRMIHVLDPIPYVASALIIAMACLLATSIPTLRAARIDPIATLRKD*
Ga0068861_10159958423300005719Switchgrass RhizosphereAGAGLAAALAILLLTLPGASEIGDWVHVLDPAAYGVSVMTIVTSCALAVSVPALRAARIDPIATLRKD*
Ga0075427_1003678113300006194Populus RhizosphereYATSALVIVTACLLAALVPTWRAVRIDPIATLRQQ*
Ga0068871_10217164913300006358Miscanthus RhizosphereAILLAAVDSGIGGIVDVFDPVAYLASVLVIVTSCAVAVLVPALRASRIDPIATLRKD*
Ga0074054_1188184023300006579SoilIASVLLIVTSCVLAVSVPALRAARIDPIATLRKD*
Ga0079222_1248696623300006755Agricultural SoilVLTATATELQGWMHVLDPVAYIASVLLIATSCVVAVSVPALRAVRIDPIATLGKD*
Ga0075428_10042981113300006844Populus RhizosphereTVNVLDPLAYVSSTLVIVTACLIAVSVPTLRAVRVDPITTLRKE*
Ga0075430_10097156433300006846Populus RhizosphereVKVFDPVAYAASLLVIITSCALAVSVPALRAARIDPIAMLRKD*
Ga0075431_10056981013300006847Populus RhizosphereAVATLLLSTPAASEIGSLVHVLDPVAYITGVLVIASACLLASSLPMLRAARIDPIAALRNE*
Ga0075433_1105066223300006852Populus RhizosphereAYGVSVMTIVTSCALAVSVPALRAARIDPIATLRKD*
Ga0075433_1129976013300006852Populus RhizosphereAYAASVLVIAAACLLAVSVPALRAARIDPIATLRND*
Ga0079215_1063190713300006894Agricultural SoilAAGVLVIVTSCALAVSVPALRAARIDPIATLRKD*
Ga0075436_10105130323300006914Populus RhizosphereAAGAGLAAALSILLLALPGAAELGDWVHVLDPVAYGVSVMTIVTSCALAVSVPALRAARIDPIATLRKD*
Ga0079218_1380833513300007004Agricultural SoilGLAAGGGLAAAVAIVLTATPLAAEIGDLDVLDPVAYGASVLLIVTSCVLAVSVPALRAARIDPIATLRKD*
Ga0099829_1175646223300009038Vadose Zone SoilDIVHVFDPVAYAASILVIVTSCVLAVSVPALRAARIDPIATLRQD*
Ga0105106_1069102123300009078Freshwater SedimentVAYAASLLVIVTSCVLAVSVPALRAARIDPIATLRRD*
Ga0105106_1137552513300009078Freshwater SedimentVAYAAGLLVIVTSCALAVSVPALRAARIDPIATLRRD*
Ga0111539_1007566913300009094Populus RhizosphereVLDPVAYGVSVMTIVTSCALAVSVPALRAARIDPIATLRKD*
Ga0111539_1026978733300009094Populus RhizosphereAVATMLMAVSDGEVGTMIKVFDPTAYTTSVLVIVVSCALAATVPALRAARIDPIATLRRE
Ga0111539_1151492023300009094Populus RhizosphereAAALAILLLTLPGAAEIADWVHVLDPAAYGAGIVTILLSCALAVSIPALRAARIDPIATLRKD*
Ga0111539_1172937513300009094Populus RhizosphereAGLAAALSILLLALPGAAELGDWVHVLDPVAYGVSVMTIVTSCALAVSVPARRAARIDPIATLRKD*
Ga0105091_1046082523300009146Freshwater SedimentVAYAASLLVIVTSCALAVSVPALRAARIDPMVTLRKD*
Ga0114129_1098388333300009147Populus RhizosphereDPVAYGVSVMTIVTSCALAVSVPALRAARIDPIATLRKD*
Ga0114129_1163466213300009147Populus RhizosphereVAYAASLLIIVTSCVLAVSVPALRAARIDPIATLRKD*
Ga0105243_1259715613300009148Miscanthus RhizosphereGSELGAWVDVFDPVAYATSLLLIVAASMIATVFPALRAASLDPIATLRID*
Ga0111538_1413444723300009156Populus RhizosphereEIGDIVHVFDPLAYAASVLVIAAACLLAVSVPALRAARIDPIATLRND*
Ga0075423_1116610723300009162Populus RhizosphereGIVLIAIPGASSPLSQIVHVFDPVAYAASLICIVAACALAALIPAMRAAGIAPVDALRQD
Ga0075423_1256380223300009162Populus RhizospherePAAYVTCVLVIASACLLAASLPTLRAARIDPIAALRNE*
Ga0105249_1064928513300009553Switchgrass RhizosphereVAYAGSVLVIVTSCALAASVPAWRAARIDPITTLRRD*
Ga0134111_1022272413300010329Grasslands SoilSASLLVIVTSCALAVSVPALRAACIDPIATLKKD*
Ga0126377_1316776123300010362Tropical Forest SoilLAAGGGLAIAVAIVLTATATELRGWMHLLDPVAYIACVLVIVTSCVLAVSVPALRVARIDPIATLRKD*
Ga0126383_1082027913300010398Tropical Forest SoilMYSIFDPVAYAASLLVIVTSCGLAVWIPSLRAARIDPFETLRKD*
Ga0105246_1010234453300011119Miscanthus RhizosphereVFDPVAYAASALIIATACLIAVSIPALRAARIDPIATLRKD*
Ga0137374_1015912433300012204Vadose Zone SoilVAYSASLLVIVTSCALAVSVPALRAACIDPIATLKKD*
Ga0157350_101083913300012499Unplanted SoilEIGDSVDVFDPVAYAASALIIATACLIAVSIPALRAARIDPIATLRKD*
Ga0157302_1031161823300012915SoilLPGASEIGDWVHVLDPAAYGVSVITIVTSCALAVSVPALRAARIDPIATLRKD*
Ga0157375_1024046933300013308Miscanthus RhizospherePVAYGTSALTIVMSSALAVSVPALRAARIDPIATLRKD*
Ga0134075_1041521723300014154Grasslands SoilVAYSASLLVIVTSCALAVSVPALRAACIDPIATLRKD*
Ga0157380_1324469013300014326Switchgrass RhizosphereDPSAYATSLLVIVVSCTLAAAVPALRAARIDPIATLRRE*
Ga0173478_1068690123300015201SoilVWVDVFDPVAYAASLLVIVTSCALAVSVPALRAARIDPIATLRKD*
Ga0180073_111103313300015256SoilIPDMVQVFDPVAYAASLLVIVTSCVLAVSVPALRAARIDPIATLRKD*
Ga0180121_1012245813300017695Polar Desert SandATVLMAIPAASQIRDIVHIFDPVAYAATLLCIVMACALAALIPALRAARIDPIATLRQD
Ga0184626_1035454913300018053Groundwater SedimentGDIVRVFDPLAYTVSLLCIVTACALAASIPALRAARIDPIATLRQD
Ga0184637_1053191213300018063Groundwater SedimentVLMATPAASEIGNLVHVFDPVAYAASLLVIVTACVLAASVPALRAARIDPIATLRKD
Ga0190272_1152055523300018429SoilSEIGDLKVLDPLAYGASVLVIVTSCVLAVSVPALRAARIDPIATLRQD
Ga0190272_1178915723300018429SoilPAASQIGAVVRVFDPVAYAASLLLVVTTCTLAASIPAWRAALIDPIATLRND
Ga0190272_1209667523300018429SoilGGIVHVFDPVAYAASLACIVTACVFAGFIPALRAARIDPMKTLRQE
Ga0190275_1096133013300018432SoilAGGVIAAALAIVLMTTPVAAEIGDSVRVFDPVAYLASLLVIVTSCALAVSVPALRASRIDPIATLRKD
Ga0190270_1102309913300018469SoilPIAAEIGGSVNVFDPVAYAAGLLVIVSSCVVAVSVPTWRAARIDPIATLRKD
Ga0190270_1115712813300018469SoilLDPVAYASGLLVIVTSCALAVSVPALRAARIDPIATLRQD
Ga0190264_1066901113300019377SoilAASQIGSVVHVFDPVAYAASLLVIVTSCVLAASVPALRAARIDPIATLRKD
Ga0210382_1001739833300021080Groundwater SedimentVAYSASLLVIVTSCALAVSVPALRAACIDPIATLKKD
Ga0207657_1021449743300025919Corn RhizosphereLLLTLPGASEIGDWVHVLDPAAYGVSVMTIVTSCALAVSVPALRAARIDPIATLRKD
Ga0207659_1149354123300025926Miscanthus RhizosphereVFDPVAYAASLLVIVTSCVLAASVPALRAARIDPIATLRKD
Ga0207701_1153838823300025930Corn, Switchgrass And Miscanthus RhizosphereASEIGNLVQVFDPVAYAASLLVIVTSCVLAASVPALRAARIDPIATLRKD
Ga0207669_1038259633300025937Miscanthus RhizosphereDGSEIHGWVDVFDPVAYATSLLVIVTASICATLVPALRAACIDPIATLRQD
Ga0207704_1092801323300025938Miscanthus RhizosphereAEMGDSVDVFDPVAYAASALIIATACLIAVSIPALRAARIDPIATLRKD
Ga0207678_1145936713300026067Corn RhizospherePVAYSASALVIATACLIAVSVPTLRATRIDPIATLRKD
Ga0207708_1009110853300026075Corn, Switchgrass And Miscanthus RhizosphereVAIVLRATPLAAEMGDSVDVFDPVAYAASALIIATACLIAVSIPALRAARIDPIATLRKD
Ga0207675_100008079153300026118Switchgrass RhizosphereIVLRATPLAAEIGDSVDVFDPVAYAASALIIATACLIAVSIPALRAARIDPIATLRKD
Ga0209131_136972423300026320Grasslands SoilYAASLLVIVTSCALAVSVPALRAACIDPIATLRKD
Ga0209998_1004449723300027717Arabidopsis Thaliana RhizosphereMATPAASEIGNVVHVFDPVAYLASALIIAAASLLGVAVPALRAARIDLIATLRRD
Ga0209382_1137724933300027909Populus RhizospherePAASAIGDIVRVFDPVAYALSGLVVVTACALAAWVPALRACRLDPVATLRQD
Ga0209705_1007889423300027979Freshwater SedimentVAYAASLLVIVTSCVLAVSVPALRAARIDPIATLRRD
Ga0247824_1101391523300028809SoilYWCAHGGVIDVFDPVAYAASALIIATACLIAVSVPTLRAARIDPIATLRKD
Ga0247825_1026419823300028812SoilMATPAAAEIGAVVDIFDPVAYAASALVIATASLIAVSVPTVRATRIDPIEILRKD
Ga0299913_1131671913300031229SoilAASLFGGALIHVYDPVAYTGSLLVIVTACALAAAIPTWRAARIDPIATLRQD
Ga0310887_1102398323300031547SoilAGIGSIVHVFDPMAYTASLLVIVTSCLLAVSVPALRAVRIDPIATLRKE
Ga0310886_1011450333300031562SoilALAVVLTSAAAEIGSIVHVFDPMAYTASLLVIVTSCLLAVSVPALRAVRIDPIATLRKE
Ga0307468_10223549023300031740Hardwood Forest SoilVAYAASLLVIVTSCVLAASVPALRAARIDPIATLRKD
Ga0310900_1090578923300031908SoilLAAAVAIVLMTTPIAAEMGDSIDVLDPGAYAASLLVIVTSCVFAVSLPALRAARIDPIATLRKD
Ga0310901_1020889513300031940SoilGDVINVFDPVAYAASALVIATACLIAVSVPTLRAARIDPIATLRKD
Ga0310885_1069932213300031943SoilLMATPMASEIGNLVQVFDPVAYAASLLVIVTSCVLAASVPALRAARIDPIATLRKD
Ga0310884_1002145223300031944SoilDSIDVLDPGAYAASLLVIVTSCVFAVSLPALRAARIDPIATLRKD
Ga0307416_10388368123300032002RhizosphereYLASALIIAAASLLGVAVPALRAARIDPIATLRRD
Ga0310897_1024941213300032003SoilTPVAAEIGSLVNVFDPVAYTASLLCIGTACVLAASIPALRAARIDPIATLRQD
Ga0310899_1006110713300032017SoilVHVLDPVAYGVSVMTIVTSCALAVSVPALRAARIDPIATLRKD
Ga0310899_1011833523300032017SoilAYAASLLVIVTSCVFAVSLPALRAARIDPIATLRKD
Ga0310890_1064593013300032075SoilPLAYAASALVIATASLIAVSVPTLRAARIEPIAILRKD
Ga0310890_1154833913300032075SoilVAAIVLMSTSLASEIGGVVDVFDPVAYAASLAVIVMSCAIAVSVPALRAARIDPIATLRR
Ga0310895_1013291413300032122SoilIVLMTTPIAVEIGDSIDVLDPGAYAASLLVIVTSCVFAVSLPALRAARIDPIATLRKD
Ga0310895_1078289523300032122SoilSLVNVFDPVAYTASLLCIGTACVLAASIPALRAARIDPIATLRQD
Ga0315910_1013537233300032144SoilEVGMLITVFDPTAYATSLLVIVVSCTLAAAVPALRAARIDPIATLRRE
Ga0310889_1016791813300032179SoilLSILLLALPGAAELGDWVHVLDPVAYGVSVMTIVTSCALAVSVPALRAARIDPIATLRKD
Ga0310889_1020620713300032179SoilTPASAEIAAVVDVFDPVAYAASALVIATASLIAVSVPTLRAARIDPIAILRKD
Ga0310889_1021591913300032179SoilLPGAAELGDWVHVLDPVAYGVSVMTIVTSCALAVSVPALRAARIDPIATLRKD
Ga0316622_10042832813300033416SoilPVAYAASLLVIIMACVLAALVPGLRAARIDSMVALRQE
Ga0364925_0365168_429_5423300034147SedimentVAYAASALVIATASLIAVSVPTVRAARIDPIAILRKD


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