Metagenome Family F087417

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087417
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	150 residues
Representative Sequence	MKPSRVAVFVVAGVIALQMSPGLVAGGPGVGDEESKTLTLTKECGTAILAPGELRYCTVTASNFRPLKGAKIRYFGPGFFTPDHPFLDSWVVIESEHGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTLDGTTWYWNGATSSHD
Number of Associated Samples	90
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.36 %
% of genes near scaffold ends (potentially truncated)	33.64 %
% of genes from short scaffolds (< 2000 bps)	77.27 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.455 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.818 % of family members)
Environment Ontology (ENVO)	Unclassified (37.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.818 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 1.64% β-sheet: 28.96% Coil/Unstructured: 69.40%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF07638	Sigma70_ECF	20.00
PF00069	Pkinase	6.36
PF08439	Peptidase_M3_N	2.73
PF00106	adh_short	1.82
PF02518	HATPase_c	1.82
PF09865	DUF2092	0.91
PF16277	DUF4926	0.91
PF07992	Pyr_redox_2	0.91
PF13570	PQQ_3	0.91
PF00196	GerE	0.91
PF13360	PQQ_2	0.91
PF00903	Glyoxalase	0.91
PF00144	Beta-lactamase	0.91
PF14378	PAP2_3	0.91
PF01926	MMR_HSR1	0.91
PF02667	SCFA_trans	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	25.45
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	20.00
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	2.73
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.91
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.91
COG2031	Short chain fatty acids transporter	Lipid transport and metabolism [I]	0.91
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.91
COG2978	p-Aminobenzoyl-glutamate transporter AbgT	Coenzyme transport and metabolism [H]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.45 %
Unclassified	root	N/A	44.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.45 %
Unclassified	root	N/A	44.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.45 %
Unclassified	root	N/A	44.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	12.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.27 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.73 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	1.82 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.82 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	1.82 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.82 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	7.27 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	1.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.82 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	5.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	1.82 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.82 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	5.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.82 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	1.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.82 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	3.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
unclassified Ensifer	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer	1.82 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.82 %
Rhizobium grahamii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium grahamii	0.91 %
Rhizobium alamii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium alamii	0.91 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.55 %
Rhizobium sp. 57MFTsu3.2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. 57MFTsu3.2	2.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.73 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.82 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.82 %
Ensifer sp. OV372	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. OV372	0.91 %
Ensifer sp. YR511	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. YR511	0.91 %
Rhizobium sp. IBUN	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. IBUN	0.91 %
Rhizobium grahamii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium grahamii	0.91 %
Rhizobium alamii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium alamii	0.91 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100739211	Not Available	956	Open in IMG/M
3300004156\|Ga0062589_100114024	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300005093\|Ga0062594_101523416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. 57MFTsu3.2	687	Open in IMG/M
3300005162\|Ga0066814_10051444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. 57MFTsu3.2	679	Open in IMG/M
3300005294\|Ga0065705_10383114	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300005330\|Ga0070690_101573748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. 57MFTsu3.2	532	Open in IMG/M
3300005334\|Ga0068869_101325924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. IBUN	635	Open in IMG/M
3300005335\|Ga0070666_10071713	All Organisms → cellular organisms → Bacteria	2358	Open in IMG/M
3300005340\|Ga0070689_100124426	All Organisms → cellular organisms → Bacteria	2062	Open in IMG/M
3300005343\|Ga0070687_100601417	All Organisms → cellular organisms → Bacteria → Proteobacteria	755	Open in IMG/M
3300005364\|Ga0070673_102295241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium alamii	513	Open in IMG/M
3300005365\|Ga0070688_100101479	All Organisms → cellular organisms → Bacteria	1898	Open in IMG/M
3300005367\|Ga0070667_101900664	Not Available	560	Open in IMG/M
3300005441\|Ga0070700_100266859	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300005456\|Ga0070678_100874941	Not Available	820	Open in IMG/M
3300005456\|Ga0070678_102154246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium grahamii	528	Open in IMG/M
3300005457\|Ga0070662_101546902	Not Available	572	Open in IMG/M
3300005518\|Ga0070699_100077608	All Organisms → cellular organisms → Bacteria → Acidobacteria	2892	Open in IMG/M
3300005526\|Ga0073909_10066308	All Organisms → cellular organisms → Bacteria → Acidobacteria	1351	Open in IMG/M
3300005543\|Ga0070672_100841366	Not Available	809	Open in IMG/M
3300005548\|Ga0070665_101172723	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300005713\|Ga0066905_100008542	All Organisms → cellular organisms → Bacteria	4678	Open in IMG/M
3300005840\|Ga0068870_10054108	All Organisms → cellular organisms → Bacteria	2134	Open in IMG/M
3300006196\|Ga0075422_10066384	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300006358\|Ga0068871_101437068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. OV372	651	Open in IMG/M
3300006358\|Ga0068871_102331324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. YR511	510	Open in IMG/M
3300006846\|Ga0075430_100743722	All Organisms → cellular organisms → Bacteria → Proteobacteria	808	Open in IMG/M
3300006880\|Ga0075429_100459187	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300009009\|Ga0105105_10844118	Not Available	557	Open in IMG/M
3300009037\|Ga0105093_10692529	Not Available	584	Open in IMG/M
3300009100\|Ga0075418_10014560	All Organisms → cellular organisms → Bacteria → Acidobacteria	8715	Open in IMG/M
3300009147\|Ga0114129_10062773	All Organisms → cellular organisms → Bacteria	5189	Open in IMG/M
3300009156\|Ga0111538_10696080	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1288	Open in IMG/M
3300009177\|Ga0105248_13297451	Not Available	513	Open in IMG/M
3300009527\|Ga0114942_1006515	All Organisms → cellular organisms → Bacteria	3223	Open in IMG/M
3300010042\|Ga0126314_10287818	Not Available	1171	Open in IMG/M
3300010359\|Ga0126376_11234524	Not Available	764	Open in IMG/M
3300010362\|Ga0126377_10032554	All Organisms → cellular organisms → Bacteria	4420	Open in IMG/M
3300010362\|Ga0126377_13204910	Not Available	529	Open in IMG/M
3300010399\|Ga0134127_10504783	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1222	Open in IMG/M
3300010400\|Ga0134122_13074725	Not Available	521	Open in IMG/M
3300010401\|Ga0134121_12216931	Not Available	586	Open in IMG/M
3300010403\|Ga0134123_11059373	Not Available	831	Open in IMG/M
3300011444\|Ga0137463_1069711	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300012469\|Ga0150984_118732992	Not Available	559	Open in IMG/M
3300012685\|Ga0137397_10706299	Not Available	749	Open in IMG/M
3300012948\|Ga0126375_10396951	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300012958\|Ga0164299_11077820	Not Available	598	Open in IMG/M
3300012988\|Ga0164306_11822381	Not Available	529	Open in IMG/M
3300013297\|Ga0157378_13225001	Not Available	507	Open in IMG/M
3300013306\|Ga0163162_10527260	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300014326\|Ga0157380_10024773	All Organisms → cellular organisms → Bacteria → Acidobacteria	4545	Open in IMG/M
3300014969\|Ga0157376_12082291	Not Available	606	Open in IMG/M
3300015371\|Ga0132258_10144262	All Organisms → cellular organisms → Bacteria → Acidobacteria	5702	Open in IMG/M
3300015371\|Ga0132258_13047744	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300015371\|Ga0132258_13570305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1064	Open in IMG/M
3300015373\|Ga0132257_100099269	All Organisms → cellular organisms → Bacteria	3348	Open in IMG/M
3300015373\|Ga0132257_100293773	All Organisms → cellular organisms → Bacteria	1951	Open in IMG/M
3300015373\|Ga0132257_101639374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	823	Open in IMG/M
3300015373\|Ga0132257_103057174	Not Available	609	Open in IMG/M
3300015374\|Ga0132255_100338084	All Organisms → cellular organisms → Bacteria → Acidobacteria	2177	Open in IMG/M
3300015374\|Ga0132255_102691036	Not Available	760	Open in IMG/M
3300018067\|Ga0184611_1008414	All Organisms → cellular organisms → Bacteria	2846	Open in IMG/M
3300018072\|Ga0184635_10247532	Not Available	706	Open in IMG/M
3300018081\|Ga0184625_10014704	All Organisms → cellular organisms → Bacteria	3657	Open in IMG/M
3300018469\|Ga0190270_10707122	Not Available	1001	Open in IMG/M
3300018476\|Ga0190274_10007727	All Organisms → cellular organisms → Bacteria → Acidobacteria	6576	Open in IMG/M
3300018476\|Ga0190274_10218597	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300018476\|Ga0190274_11905023	Not Available	690	Open in IMG/M
3300018481\|Ga0190271_10830790	Not Available	1048	Open in IMG/M
3300018481\|Ga0190271_11860486	Not Available	713	Open in IMG/M
3300018481\|Ga0190271_12842393	Not Available	581	Open in IMG/M
3300020005\|Ga0193697_1001169	All Organisms → cellular organisms → Bacteria	8019	Open in IMG/M
3300020016\|Ga0193696_1050202	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300021339\|Ga0193706_1106163	Not Available	765	Open in IMG/M
3300022549\|Ga0212091_10071872	All Organisms → cellular organisms → Bacteria	1292	Open in IMG/M
3300025901\|Ga0207688_10740183	Not Available	622	Open in IMG/M
3300025908\|Ga0207643_11085267	Not Available	517	Open in IMG/M
3300025925\|Ga0207650_11804181	Not Available	517	Open in IMG/M
3300025926\|Ga0207659_10221533	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300025926\|Ga0207659_10464945	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300025937\|Ga0207669_11881014	Not Available	511	Open in IMG/M
3300025941\|Ga0207711_10171572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1968	Open in IMG/M
3300025941\|Ga0207711_10384748	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300025941\|Ga0207711_10903293	Not Available	821	Open in IMG/M
3300025960\|Ga0207651_10763598	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300025960\|Ga0207651_11528536	Not Available	601	Open in IMG/M
3300026075\|Ga0207708_10033160	All Organisms → cellular organisms → Bacteria	3922	Open in IMG/M
3300026075\|Ga0207708_10209842	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1556	Open in IMG/M
3300026089\|Ga0207648_12230694	Not Available	508	Open in IMG/M
3300026116\|Ga0207674_10999812	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300026118\|Ga0207675_100623420	Not Available	1083	Open in IMG/M
3300027713\|Ga0209286_1008505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3601	Open in IMG/M
3300027821\|Ga0209811_10056670	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300027907\|Ga0207428_10035617	All Organisms → cellular organisms → Bacteria	4067	Open in IMG/M
3300028812\|Ga0247825_10718136	Not Available	719	Open in IMG/M
3300031548\|Ga0307408_100750957	Not Available	881	Open in IMG/M
3300031858\|Ga0310892_10892378	Not Available	622	Open in IMG/M
3300031908\|Ga0310900_11838464	Not Available	516	Open in IMG/M
3300032075\|Ga0310890_11242019	Not Available	608	Open in IMG/M
3300032157\|Ga0315912_10806713	Not Available	747	Open in IMG/M
3300032163\|Ga0315281_10696714	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300032163\|Ga0315281_11669814	Not Available	619	Open in IMG/M
3300032211\|Ga0310896_10554393	Not Available	636	Open in IMG/M
3300033004\|Ga0335084_10157551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2362	Open in IMG/M
3300034257\|Ga0370495_0078616	All Organisms → cellular organisms → Bacteria → Acidobacteria	1010	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.73%
Host-Associated	Host-Associated	47.27%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	47.27%
Terrestrial	Environmental → Terrestrial	42.73%
Aquatic	Environmental → Aquatic	10.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.27%
Freshwater	Environmental → Aquatic → Freshwater	6.36%
Sediment	Environmental → Aquatic → Sediment	3.64%
Roots	Host-Associated → Plants → Roots	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.64%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.18%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.73%
Lake	Environmental → Aquatic → Freshwater → Lake	1.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.82%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.82%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.18%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.27%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.64%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.73%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	8.18%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.73%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.82%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.91%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300022549	Cold Creek_combined assembly	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300034257	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1007392111	3300000956	Soil	MKPIPRRNRLPQLVVACVVILQIAPGLAAVGSGADDRGSRTLTVTKECGTATLAPGELGYCTVIASNFRPLRGAKIRYFGPGFFTATHPFLDSWVMIESEDGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTADGTIWQWDGARAGDD*
Ga0063454_1009096632	3300004081	Soil	MKPNRIQSRLILFAFACFVAIQMSADLTAGALGAGSQMSPGLVAAGSGEGNKESKTLTVTKECGTATLLPGELDYCTVTASNFRPLRGARIRYFGPGFFTGNHPFLDSWVVIESDQDGGGTAFGHCLVRGVPGVL
Ga0062589_1001140243	3300004156	Soil	MKPSRVALFVVAGAIALQMSVGVVADHPGAGNEEAKPLTVTKDCGIATLVPGELRYCTVTESNFRPLRGAKIRYFGPGFTTPDHPYLDSWVVIETEQGGGGTAFGHCLVRGVPAPLGACQFTGGSGSLQGFKADVTVTKADGTIWHWNGAMSSRD*
Ga0062594_1015234161	3300005093	Soil	MKPSRVKGVALCLFTCVGVLQTSAGPAAAGPGEGNKEPKTLTVTKECGTASLEQGELNYCTVLESNFRALRGAKIRYFGPGFFKADHPFLDSWVVIESDQGEGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTVTTVDGTIWHWNGSTSSGD*
Ga0066814_100514441	3300005162	Soil	MKPSRVAVFVVAGVIALQMSPGLVAGGPGVGDEESKTLTLTKECGTAILAPGELRYCTVTASNFRPLKGAKIRYFGPGFFTPDHPFLDSWVVIESEHGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTLDGRTWYWNGATSSHD*
Ga0065705_103831141	3300005294	Switchgrass Rhizosphere	MTPSRVALFVTAGLIALQMSPGLSAGGPGGRDDESKTLTVTKVCGTATLAPGELGYCTVTASDFRPLRGAKIRYFGPGFFTPDHRYLDSRVVIESEHDGGGTAFGHCLVRGVPEVLGACQFTGGSGSLRGFKADVTVTTLDGTTWYWNGASHE*
Ga0070676_110538471	3300005328	Miscanthus Rhizosphere	PGAGNEEAKPLTVTKDGGIATLVPGELRYCTVTESNFRPLRGAKIRYFGPGFTTPDHPYLDSWVVIETEQGGGGTAFGHCLVRGVPAPLGACQFTGGSGSLQGFKADVTVTKADGTIWHWNGAMSSRD*
Ga0070690_1015737481	3300005330	Switchgrass Rhizosphere	MKPSRIQSRFFVFVFACVVALQMSPGLAAGGPGAGNKESKTLTLTKECGTATLAPGELGYCTVIDSNFRPLRGAKIRYFGPGFFTANHPFLDSWVVIESDEGGTAFGHCLVRGVPDVLGACQFTGGSGSLKGFKADVTVTTVDGTIWHWNGAISSDD*
Ga0068869_1013259241	3300005334	Miscanthus Rhizosphere	MKPGSMPSGVVLSVFACAIALQMSSGLVAGGPGGGNDESKTLTLTKDCSSVPLSPGELKYCTVIASNFRALRGAKIRYFGPGFFAPNHPFLDSWVVIESEQGGGGTAFGHCLVRGVPEALGACQFTGGSGSLKGFKADVTVTTMDGTIWYWNGAASHD*
Ga0070666_100717131	3300005335	Switchgrass Rhizosphere	VVADHPGAGNEEAKPLTVTKDCGIATLVPGELRYCTVTESNFRPLRGAKIRYFGPGFTTPDHPYLDSWVVIETEQGGGGTAFGHCLVRGVPAPLGACQFTGGSGSLQGFKADVTVTKADGTIWHWNGAMSSRD*
Ga0070689_1001244262	3300005340	Switchgrass Rhizosphere	MKPSRVKGVALCLFTCVGVLQTSAGPAAAGPGEGNKEPKTLTVTKECGTATLEQGELNYCTVLESNFRALRGAKIRYFGPGFFKADHPFLDSWVVIESDQGEGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTVTTVDGTIWHWNGSTSSGD*
Ga0070687_1006014172	3300005343	Switchgrass Rhizosphere	MKPSRVKGVALCLFTCVGVLQTSAGPAAAGPGEGNKEPKTLTVTKECGTATLEQGELNYCTVLESNFRALTGAKIRYFGPGFFKADHPFLDSWVVIESDQGEGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTVTTVDGTIWHWNGSTSSGD*
Ga0070673_1011951871	3300005364	Switchgrass Rhizosphere	MKPSRVALFVVAGAIALQMSVAVVADHPGAGNEEAKPLTVTKDCGIATLVPGELRYCTVTESNFRPLRGAKIRYFGPGFTTPDHPYLDSWVVIETEQGGGGTAFGHCLVRGVPAPLGACQFTGGSG
Ga0070673_1022952411	3300005364	Switchgrass Rhizosphere	GPGEGNKEPKTLTVTKECGTATLEQGELNYCTVLESNFRALRGAKIRYFGPGFFKADHPFLDSWVVIESDQGEGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTVTTVDGTIWHWNGSTSSGD*
Ga0070688_1001014791	3300005365	Switchgrass Rhizosphere	MKPSRVKGVALCLFTCVGVLQTSAGPAAAGPGEGNKESKTLTVTKECGTATLEQGELNYCTVLESNFRALRGAKIRYFGPGFFKADHPFLDSWVVIESDQGEGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTVTTVDGTIWHWNGSTSSGD*
Ga0070667_1019006641	3300005367	Switchgrass Rhizosphere	MKSSCLQSRVVLFAIACVVALPMSPGLAASGPGVENNESKTLTVTKDCGTTPPPGELGYCTVTESNFRPLRGAKIRYFGPGFLADGHPFLDSWVVIESEQGGGGTAFGHCLVRAFPDVLGACQFTGGSGSLKGFKADVTVTSLGGTIWQWHGSISSDD*
Ga0070700_1002668591	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKPSRVALFVVAGAIALQMSVGVVADHPGAGNEEAKPLTVTKDCGIATLVPGELRYCTVTESNFRPLRGAKIRYFGPGFTTPDHPYLDSWVVIETEQGGGGTAFGHCLVRGVPAPLGACQFTGGSGSLQG
Ga0070678_1008749411	3300005456	Miscanthus Rhizosphere	MKPSRVQSGVALLVFACVVALHMSPGLKAGGPGKENKPSRTLTVTKECGTATLAPGELSYCTITESNFRALRGAKIRYFGPGFRTVDHPFLDSWVVIESTLGGGGTAFGHCLVRGVPDVLGACQFTGGSGSLQGFKADVTVTTVDGTIWHWRGA
Ga0070678_1021542461	3300005456	Miscanthus Rhizosphere	RSVPATLVLAVVSLLIPPNIVAADERAGDDGASKTLTVTKECGTATLQTGELDYCTVTKSNFRSLRGAKIRYFGPGFSNANHPFLDSWVVIESDEGGGGTAFGHCLVRGVPEALGACQFTGGSGSLRGFRANVTVTTAGGTIWHWNGTYSTND*
Ga0070662_1015469022	3300005457	Corn Rhizosphere	ADHPGAGNEEAKPLTVTKDCGIATLVPGELRYCTVTESNFRPLRGAKIRYFGPGFTTPDHPYLDSWVVIETEQGGGGTAFGHCLVRGVPAPLGACQFTGGSGSLQGFKADVTVTKADGTIWHWNGAMSSRD*
Ga0070699_1000776083	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKPSRVALFVVAGAIALQMSVGVVADHPGAGNEEAKPLTVTKDCGIATLVPGELRYCTVTESNFRPLGGAKIRYFGPGFTTPDHPYLDSWVVIETEQGGGGTAFGHCLVRGVPAPLGACQFTGGSGSLQ
Ga0073909_100663082	3300005526	Surface Soil	MKPSRVAVFVVAGVIALQMSPGLVAGGPGVGDEESKTLTLTKECGTAILAPGELRYCTVTASNFRPLKGAKIRYFGPGFFTPDHPFLDSWVVIESEHGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTLDGTTWYWNGATSSHD*
Ga0070672_1008413661	3300005543	Miscanthus Rhizosphere	GPGEGNKEPKTLTVTKECGTATLEQGELNYCTVLESNFRPLRGAKIRYFGPGFFKADHPFLDSWVVIESDQGEGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTVTTVDGTIWHWNGSTSSGD*
Ga0070665_1011727232	3300005548	Switchgrass Rhizosphere	ALCLFTCVGVLQTSAGPAAAGPGEGNKESKTLTVTKECGTATLEQGELNYCTVLESNFRALRGAKIRYFGPGFFKADHPFLDSWVVIESDQGEGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTVTTVDGTIWHWNGSTSSGD*
Ga0066905_1000085421	3300005713	Tropical Forest Soil	MKPSRVALSVIAGAIALQMSADVRADHPGAGNEDAKSLTVTKECGVAQLEPGELRYCTVTASNFPPLRGAKIRYFGPGFLTPDHPYLDSWVVIESEQAGAGTAFGHCLVRRVPEVLGACQFTGGSGSLKGFKADVTVTTLDGRTWYWNGALTSRD*
Ga0068870_100541081	3300005840	Miscanthus Rhizosphere	MKANRVKGVALCVFTCVVALQTSAGPAAAGPGEGNKEPKTLTVTKECGTATLEQGELNYCTVLESNFRALRGAKIRYFGPGFFKADHPFLDSWVVIESDQGEGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTVTTVDGTIWHWNGSTSSGD*
Ga0075422_100663843	3300006196	Populus Rhizosphere	MKPSRVALFVVAGAIALQMSVGVVADHPGAGNEEAKPLTVTKDCGIATLVPGELRYCTVTESNFRPLGGAKIRYFGPGFTTPDHPYLDSWVVIETEQGGGGTAFGHCLVRGVPAPLGACQFTGGSGSLQGFKADVTVTKADGTIWHWNGAMSSRD*
Ga0068871_1014370681	3300006358	Miscanthus Rhizosphere	DSMKPGCSQRRFIVFAIATVVAHQISPGLAAGGPGEGSQMSPGLIAGRSDAGNKESKTLTVTKECRTATLAPGELDYCTVIASNFRPLNGAKIRYFGPGFFTGSHPFLDSWVVIESDQGGGGTAIGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTVDGTIWYWNGAVSSDD*
Ga0068871_1023313241	3300006358	Miscanthus Rhizosphere	PGVENNESKTLTVTKDCGTTPPPGELGYCTVTESNFRPLRGAKIRYFGPGFLADGHPFLDSWVVIESEQGGGGTAFGHCLVRAFPDVLGACQFTGGSGSLKGFKADVTVTSLGGTIWQWHGSISSDD*
Ga0075430_1007437222	3300006846	Populus Rhizosphere	GLAAGDSGAGNKELKTLTVTKDCSPVPLDPGELGYCTVLESNFRPLRGAKIRYFGPGFLTADHPFLDSWVVIESAYGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLEGFKADVTVTTLDGRTWYWNGASHD*
Ga0075420_1009677482	3300006853	Populus Rhizosphere	MKRSRVALFVVAGVIALQTSPGLLAGRPGAGDEESKTLTVTKECGTAILAPGELRYCTVTASSFRPLRGAKIRYFGPGFFTPDHPFLDSWVVIESAYGGGGTAFGHCLVRGVPEVLGACQFTGGSG
Ga0075429_1004591872	3300006880	Populus Rhizosphere	MKRSRVALFVVAGVIALQTSPGLLAGRPGVEDEESKTLTVTKECGTAILAPGELRYCTVTASSFRPLRGAKIRYFGPGFFTPDHPFLDSWVVIESAYGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLEGFKADVTVTTLDGRTWYWNGASHD*
Ga0105105_108441181	3300009009	Freshwater Sediment	MKTTLRVALFVFLCVVALQMSSALAAGGAGVGSRESRTLTVTKECGTATLAPGELNYCTVTESNFRPLRGAKIRYFGPGFFTADHPFLDSWVVIESEQGGGGTAFGHCLVRGVPDVLGACQFTGGSGSLKGFKADVTVTTVDGTIWNWRGAASADD*
Ga0105093_106925291	3300009037	Freshwater Sediment	LRVALFVFLCVVALQMSSALAAGGAGVGSRESRTLTVTKECGTATLAPGEQNYCTVTESNFRPLRGAKIRYFGPGFFTADHPFLDSWVVIESEQGGGGTAFGHCLVRGVPDVLGACQFTGGSGSLKGFKADVTVTTVDGTIWNWRGAASADD*
Ga0075418_100145602	3300009100	Populus Rhizosphere	MKRSRVALFVVAGVIALQTSPGLLAGRPGAGDEESKTLTVTKECGTAILAPGELRYCTVTASSFRPLRGAKIRYFGPGFFTPDHPFLDSWVVIESAYGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLEGFKADVTVTTLDGRTWYWNGASHD*
Ga0114129_100627733	3300009147	Populus Rhizosphere	MTPSCLQSRFVLFAFACVVAFQTSPSLAAGGPGVGNKESRTLTVTKECGTATLHPGELDYCTVTESNFRPLRGAKIRYFGPGFFAMNHPFLDSWVVIESEQGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLRGFQADVTVTTVDGTIWHWNGAISSND*
Ga0111538_106960801	3300009156	Populus Rhizosphere	MKRSRVALFVVAGVIALQTSPGLLAGRPGVEDEESKTLTVTKECGTATLAPGELGYCTVTASNFRPLRGAKIRYFGPGFFTPDHPFLDSWVVIESAYGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLEGFKADVTVTTLDGRTWYWNGASHD*
Ga0105248_132974511	3300009177	Switchgrass Rhizosphere	MPSGVVLSVFACAIALQMSSGLVAGGPGGGNDESKTLTLTKDCSSVPLSPGELKYCTVIASNFRALRGAKIRYFGPGFFAPNHPFLDSWVVIESEQGGGGTAFGHCLVRGVPEALGACQFTGGSGSLKGFKADVTVTTLDGAIWYWNGAASHD*
Ga0114942_10065153	3300009527	Groundwater	MKPSCSQNRFVLVAFACVVALQMSPGLIAGGPGAGNKESKTLTVTKECGTATLAPGELSYCTVTASNFPPLRGAKIRYFGPGFFSGDHSFLDSWVVIESDHGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTVDGTIWHWNGSLSNDD*
Ga0126314_102878181	3300010042	Serpentine Soil	MTTGRIQSRLVLFALACFVALQMSPGLAAGGPGAGNQVSPGLVAGGSGEGNKESKTLTVTKECGTVTLAPGELDYCTVIASNFPALRGARIRYFGPGFFTANHPFLDSRVVIESDQGGGGTAFGHCLVRAVPEVLGACQFTGGSGSLKGFKADVTVTTVDGTIWHWNGAVSGD*
Ga0126376_112345242	3300010359	Tropical Forest Soil	MKPSRIALFVIAGVIALHTSPSLVAGGPGIGDEDSKTLTLTKECGTPALAPAPGELRYCKVTASNFRPLRGAKIRYFGPGFFTPDHPFLDSWVVIESEQGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLEGFKADVTVTTVDGTIWHWNGSRHD*
Ga0126377_100325542	3300010362	Tropical Forest Soil	MKSSRIQSRVGLFVVGCAIALQMSPGVTAVGAGMENDDANKLTVTKECGTVTLQPGELDYCTVTASNFRPLRGAKIRYFGPGFFTADHPFLDSWVVIESAKGDGTAFGHCLVRGVPTALGACQFTGGSGSLKGFKADVTVTTLDGTIWFWNGAMSGSN*
Ga0126377_132049101	3300010362	Tropical Forest Soil	MKPSRVALSVIAGAIALQMSADVRADHPGAGNEDAKSLTVTKECGVAQLEPGELRYCTVTASNFPPLRGAKIRYFGPGFLTPDHPYLDSWVVIESEQAGAGTAFGHCLVRRVPEVLGACQFTGGSGSLKGFKADVTVTTL
Ga0134127_105047831	3300010399	Terrestrial Soil	MKPSSLQSRSLLFAVAFAVALQMAPRLAAGGPSEGNRESKTLTVTKECGTATLLPGELNYCTVTESNFRPLRGAKIRYFGPGFFAANHPFLDSWVVIESEQDGGGTSFGHCLVRGVPEPLGACQFTGGSGSLRGFRADVTVTTVDGTIWHWKGAFSSKN*
Ga0134122_130747251	3300010400	Terrestrial Soil	LQMSPGLAAGGPGAGNKESKTLTLTKECGTATLAPGELGYCTVIDSNFRPLRGAKIRYFGPGFFTANHPFLDSWVVIESDEGGTAFGHCLVRGVPNVLGACQFTGGSGSLKGFKADVTVTTVDGTIWHWNGAVSSDD*
Ga0134121_122169311	3300010401	Terrestrial Soil	MKPSSLQSRSVLLAVAFAVALQMAPRLAAGGPSEGNRESKTLTVTKECGTATLLPGELNYCTVTESNFRPLRGAKIRYFGPGFFAANHPFLDSWVVIESEQDGGGTAFGHCLVRGVPEPLGACQFTGGSGSLRGFRADVTVTTVDGTIWHWKGAFSSKN*
Ga0134123_110593731	3300010403	Terrestrial Soil	MKPSRVALLVVAGVIALQMSPGLFAGGPGVGDEESKTLTVTKECGTAILAPGELRYCTVTASNFRPLRGAKIRYFGPGFFTPDHPFLDSRVVIESEQGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTLDGRTWYWNGARSGHD*
Ga0137463_10697112	3300011444	Soil	MKPSRVALFVAAGVIALQMSPGLFAGGPGVGDEESKTLTVTKECGTAILAPGELRYCTVTASNFRPLRGAKIRYFGPGFFTPDHPFLDSRVVIESEHGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTLDGRTWYWNGARHD*
Ga0150984_1187329921	3300012469	Avena Fatua Rhizosphere	MITSRVQTRVALLVFACVVAVALTPALYAGSPGTEKKDPRTLTLTKDCGSATLAPGELSYCTVTESNFRALRGAKIRYFGPGFRTVDHPFLDSWVVIESEHDGGGTAFGHCLLRTVPDALGACQFTGGSGSL
Ga0137397_107062992	3300012685	Vadose Zone Soil	MSPGLVAAGSGAGNKESKTLTVTKECGIATLAPGELDYCTVIASNFRPLRGAKIRYFGPGFFTGNHPFLDSWVVIESDQGGGGTAFVHCLGRGVPEVLGACQFTGGSGSLKGFKADVTVTTVDGTIWHWNGAVSSDD*
Ga0126375_103969511	3300012948	Tropical Forest Soil	MKPSRVAFFVIAAVIALHKSPSLLADSPGMGDDESKTLTLTKECGTAILAPGELRYCTVTASNFRPLRGAKIRYFGPGFFTPDHRFLDSWVVIESEQGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLEGFKADVTVTTLDGTTWYWNGARHD*
Ga0164299_110778202	3300012958	Soil	MKPSRVAVFVVAGVIALQMSPGLVAGGPEVGDEESKTLTLTKECGTAILAPGELRYCTVTASNFRPLKGAKIRYFGPGFFTPDHPFLDSWVVIESEHGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGF
Ga0164306_118223811	3300012988	Soil	EKSGVLRFIRLGGGDPAVDQRSPMKSSCLQSRVVLFAIACVVALPMSPGLAASGPGVENNESKTLTVTKDCGTTPPPGELGYCTVTESNFRPLRGAKIRYFGPGFLADGHPFLDSWVVIESDQGGGGTAMGHCLVRGIPEVLGACQFTGGSGSLKGFKADVTVTTVDGTIWHWNGA
Ga0157378_132250011	3300013297	Miscanthus Rhizosphere	MKPSRIQSRFFVFVFACVVALQMSPGLAAGGPGAGNKESKTLTLTKECGTATLAPGELGYCTVIDSNFRPLRGAKIRYFGPGFFTANHPFLDSWVVIESEQGGGGTAFGHCLVRGVPEPLGACQFTGGSGSLRGFRADVTVTTVDG
Ga0163162_105272602	3300013306	Switchgrass Rhizosphere	MPSGVVLSVFACAIALQMSSGLVAGGPGGGNDESKTLTLTKDCSSVPLSPGELKYCTVIASNFRALRGAKIRYCGPGFFAPNHPFLDSWVVIESEQGGGGTAFGHCLVRGVPEALGACQFTGGSGSLKGFKADVTVTTMDSTIWYWNGAASHD*
Ga0157380_100247733	3300014326	Switchgrass Rhizosphere	MKPSRVKGVALCLFTCVGVLQTSAGPAAAGPGEGNKEPKTLTVTKECGTATLEQGELNYCTVLESNFRALRGEKIRYFGPGFFKADHPFFDSWVVIERDQDEGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTVTTVDGTIWHWNGSTSSGD*
Ga0157376_120822912	3300014969	Miscanthus Rhizosphere	GGPGVGDDDSKTLTLNKECGTAILAPGELRYCTVTASNFRPLRGAKIRYFGPGFFTPDHPFLDSWVLIESDQDGGGTAFGHCLVRGVPGPLGACQFTGGSGSLKGFKANVTVTTMDGKIWHWNGAFSNDD*
Ga0132258_101442621	3300015371	Arabidopsis Rhizosphere	VGALQTSAGLAAAAPGEGNKELRTLTVTKECGTATLAQGELSYCTVLESNFRPLRGAKIRYFGPGFFTANHPYLDSWVVIESDYGEGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTVTTAGGPIWHWKGSISIGD*
Ga0132258_130477441	3300015371	Arabidopsis Rhizosphere	MKPSYRRRVVLFAFACVVALQMSPGLAARPDVGNKESKTLTVTKECGTATLHPGELGYCTVTESNFRPLRGAKIRYFGPGFFAENHPFLDSWVVIESEHGGGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFQADVTVTTMDGRTWYWNGALSSND*
Ga0132258_135703052	3300015371	Arabidopsis Rhizosphere	MKPNRVALFVVAGIIALQSSPGLVAGGPGVGDDDSKTLTLTKECGTAILAPGELRYCTVTASNFRPLRGAKIRYFGPGFFTPDHPFLDSWVVIESEQGGDGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTVDGTIWHWNGSRHD*
Ga0132257_1000992693	3300015373	Arabidopsis Rhizosphere	MKPSRVAVFVVAGVIALQMSPGLVAGGPEVGDEESKTLTLTKECGTAILAPGELRYCTVTASNFRPLKGAKIRYFGPGFFTPDHPFLDSWVVIESEQGGAGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTLDGTTWYWNGATSSHD*
Ga0132257_1002937733	3300015373	Arabidopsis Rhizosphere	MKPSYRRRIVLSAFACVVALQMSPGLAAGRPDVGNKESKTLTVTKECGTATLHPGELGYCTVTESNFRPLRGAKIRYFGPGFFAENHPFLDSWVVIESEQGGGGTAFGHCLVRGVPDVLGACQFSGGSGSLRGFQADVTVTAVDGTIWHWNGAVSGNDRHRLAGMFALASAREHSG
Ga0132257_1016393742	3300015373	Arabidopsis Rhizosphere	MKPSRIALFVVAGLIALQSSPGLLAGRPGVGDEDSKTLTVTKECGTAVLAPGELRYCTVTASNFRPLRGAKIRYFGPGFFTPDHPFLDSWVVIESEHGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLEGFKADVTVTTLDGKTWYWNGARHD*
Ga0132257_1030571741	3300015373	Arabidopsis Rhizosphere	TKGAFMKPSRIQSHLFLFVFACVAAFQMSPSLAADGLGTGNKEPKTLTVTKECGTATLASGELDYCTVIDSNFRPLRGAKIRYFGPGFFTGKHPFLDSWVVIESDQGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTVDGTIWHWNGAISSDD*
Ga0132255_1003380841	3300015374	Arabidopsis Rhizosphere	VGALQTSAGLAAAAPGEGNKELRTLTVTKECGTATLAQGELSYCTVLESNFRPLRGAKIRYFGPGFFTANHPYLDSWVVIESDYGEGGTAFGHCLVRGVPDGLGACQFTGGSGSLRGFKADVTVTT
Ga0132255_1026910361	3300015374	Arabidopsis Rhizosphere	MKPNRVALFVVAGIIALQSSPGLVAGGPGVGDDDSKTLTLTKECGTAILAPGELRYCTVTASNFRPLRGAKIRYFGPGFFTPDHPFLDSWVVIESEQGGDGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTVDGRIWHWNGSRHD*
Ga0184611_10084141	3300018067	Groundwater Sediment	MKPSRVALCVLAGVIALQMSPGLFAGRPGVGDDESKTLTVTKECGTAILAPGELRYCTVTASNFRPLRGAKIRYFGPGFFTPDHPFLDSRVVIESEQGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTQDGRTWYWNGARHD
Ga0184635_102475322	3300018072	Groundwater Sediment	SAGGPGVGDEESKTLTVTKECGTAILALGELRYCTVTASNFRPLRGAKIRYFGPGFFTPDHPFLDSWVVIESEHGDGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTLDGRTWYWNGDRHD
Ga0184625_100147043	3300018081	Groundwater Sediment	MKPSRVALIVVAGVIALQMSPGLSAGGPGVGDEESKTLTVTKECGTAILALGELRYCTVTASNFRPLRGAKIRYFGPGFFTPDHPFLDSWVVIESEHGDGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTLDGRTWYWNGDRHD
Ga0190270_107071221	3300018469	Soil	MKPYPSRNRLVQVVITCVVILQMAPGLAADDQGSKTLTVTKECGTAVLAPGELDYCTVIASNFRPLGGAKIRYFGPGFFTATHPFVDSWVVIESEYGGGGTAFGHCLVRGVPEPLGACQFTGGSGSLKGFKADVTVTPEGGGIWQWQGARATDD
Ga0190274_100077274	3300018476	Soil	MKPSRVKGGVALFVFACVIALQTSASPAAAGDGAGNKGVRTLTVTKECGTATLAPGELGYCTVLESNLRALRGAKIRYFGPGFFTPDHPFLDSWVVIESDRGDGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTVTTVDGTIWHWNGSLSSGD
Ga0190274_102185972	3300018476	Soil	MKPGCLQSRFVVFAITCVCALQMSPGLAAGGPGVGNKESRTLTVTKECGVARLRPGELDYCTVTESNFRPLRGAKIRYFGPGFFTEHHPFLDSWVVIESDQGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTVDGEIWHWNGAVSNDD
Ga0190274_119050231	3300018476	Soil	MKPICLQSRFVVFAIAGVIALQMSPGLVAGGSGEGNKESKTLTVTKECGTATLVPGELDYCTVVASNFRPLRGARIRYFGPGFFTAHHPFLDSWVVIESDQGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTVDGTIWHWNGAVSSDD
Ga0190271_108307901	3300018481	Soil	MNTSPLQSRFVVIALACVVALQMAPHLAAGGPGNGNRESKTLTVTKECGTATLHPGELGYCTITESNFRPLRGAKIRYFGPGFFTATHPFLDSWVVIESEQGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLRGFQADVTVTTVDGTIWHWNGAISSND
Ga0190271_118604861	3300018481	Soil	MKTTRVQSRVVLFVFLCAVALQMSSGLVAGGPDVGSKESSTLTVTKECGTATLAPGELSYCTVTESNVRALRGAKIRYFGPGFFTADHPFLDSRVVIESERGGGGTAFGHCLVRGVPDVLGHCQFTGGSGSLKGFKADVTVTTVDGTTWHWNGAASTDD
Ga0190271_128423931	3300018481	Soil	VITCVVILQMAPGLAADDQGSRTLTVTKECGTAVLAPGELDYCTVIASNFRPLGGAKIRYFGPGFFTATHPFVDSWVVIESEYGGGGTAFGHCLVRGVPEPLGACQFIGGSGSLKGFKADVTVTPEGGG
Ga0193697_10011692	3300020005	Soil	MKPSRVALFVVAGVIALQMSPGLFAGGPGVGDEESKTLTVTKECGTAILAPGELRYCTVTASNFRPLRGAKIRYFGPGFFTPDHPFLDSRVVIESEHGGGGTAFGHCLVRGVPEILGACQFTGGSGSLKGFKADVTVTTLDGRTWYWNGAMTSHN
Ga0193696_10502022	3300020016	Soil	MKPSRVALFVAAGVIALQMSPGLFAGGPGVGDEESKTLTVTKECGTAILAPGELRYCTVTASNFRPLRGAKIRYFGPGFFTPDHPFLDSRVVIESEHGGGGTAFGHCLVRGVPEILGACQFTGGSGSLKGFKADVTVTTLDGRTWYWNGAMTSHN
Ga0193706_11061631	3300021339	Soil	MKPSRILSAVALFVFACGIAFQISPGLSAGGPGAGNQMSPGLVAPGLGVGDEESRTLRVTKECGTATLAPGELGYCTVTASNFRPLRGAKIRYFGPGFFAADHPFLDSRVVIESEQGGGGTAFGHCLVRGIPEVLGACQFTGGERLAQGVQSRRDRHH
Ga0212091_100718722	3300022549	Groundwater	MKPSCSQNRFVLVAFACVVALQMSPGLIAGGPGAGNKESKTLTVTKECGTATLAPGELSYCTVTASNFPPLRGAKIRYFGPGFFSGDHPFLDSWVVIESDHGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTVDGTIWHWNGSLSNDD
Ga0207688_107401831	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MKPSRVALFVVAGAIALQMSVGVVADHPGAGNEEAKPLTVTKDCGIATLVPGELRYCTVTESNFRPLRGAKIRYFGPGFTTPDHPYLDSWVVIETEQGGGGTAFGHCLVRGVPAPLGACQFTGGSGSLQGFKADVTVTKADGTIWHWNGAMSSRD
Ga0207643_110852671	3300025908	Miscanthus Rhizosphere	MKANRVKGVALCVFTCVVALQTSAGPAAAGPGEGNKEPKTLTVTKECGTATLEQGELNYCTVLESNFRALRGAKIRYFGPGFFKADHPFLDSWVVIESDQGEGGTAFGHCLVRGVPDVLGACQFTGGRGSLRGFKAD
Ga0207650_118041811	3300025925	Switchgrass Rhizosphere	MKPSRIQSRFFVFVFACVVALQMSPGLAAGGPGAGNKESKTLTLTKECGTATLAPGELGYCTVIDSNFRPLRGAKIRYFGPGFFTANHPFLDSWVVIESDEGGTAFGHCLVRGVPDVLGACQFTGGSGSLK
Ga0207659_102215333	3300025926	Miscanthus Rhizosphere	MKPSRVKGVALCLFTCVGVLQTSAGPAAAGPGEGNKEPKTLTVTKECGTATLEQGELNYCTVLESNFRALRGAKIRYFGPGFFKADHPFLDSWVVIESDQGEGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTVTTVDGTIWHWNGSTSSGD
Ga0207659_104649452	3300025926	Miscanthus Rhizosphere	MKPSRIQSRFFVFVFACVVALQMSPGLAAGGPGAGNKESKTLTLTKECGTATLAPGELGYCTVIDSNFRPLRGAKIRYFGPGFFTANHPFLDSWVVIESDEGGTAFGHCLVRGVPDVLGACQFTGGSGS
Ga0207669_118810141	3300025937	Miscanthus Rhizosphere	MKPSRIQSRFFVFVFACVVALQMSPGLAAGGPGAGNKESKTLTLTKECGTATLAPGELGYCTVIDSNFRPLRGAKIRYFGPGFFTANHPFLDSWVVIESDEGGTAFGHCLVRGVPDVLGACQFTGGS
Ga0207711_101715723	3300025941	Switchgrass Rhizosphere	MKSSCLQSRVVLFAIACVVALPMSPGLAASGPGVENNESKTLTVTKDCGTTPPPGELGYCTVTESNFRPLRGAKIRYFGPGFLADGHPFLDSWVVIESEQGGGGTAFGHCLVRAFPDVLGACQFTGGSGSLKGFKADVTVTSLGGTIWQWHGSISSDD
Ga0207711_103847482	3300025941	Switchgrass Rhizosphere	MKPRSMPGGVVLAVFACVIALQMSSGLVAGGPGGGNDESRTLTLTKDCSPVPLRPGELKYCTVVASNFRALRGAKIRYFGPGFFAPNHPFLDSWVVIESEQGGGGTAFGHCLVRGVPEALGACQFTGGSGSLKGFKADVTVTTMDGTIWYWNGAASHD
Ga0207711_109032931	3300025941	Switchgrass Rhizosphere	MKPSRIQSRFFVFVFACVVALQMSPGLAAGGPGAGNKESKTLTLTKECGTATLAPGELGYCTVIDSNFRPLRGAKIRYFGPGFFTANHPFLDSWVVIESDEGGTAFGHCLVRGVPDVLGACQFTGGSGSLKGFKADVTVTTVDGTIWHWNGAISSDD
Ga0207651_107635981	3300025960	Switchgrass Rhizosphere	MKPSRVALFVVAGAIALQMSVAVVADHPGAGNEEAKPLTVTKDCGIATLVPGELRYCTVTESNFRPLGGAKIRYFGPGFTTPDHPYLDSWVVIETEQGGGGTAFGHCLVRGVPAPLGACQFTGGSGSLQGFKADVTVTKADGTIWHWNGAMSSRD
Ga0207651_115285361	3300025960	Switchgrass Rhizosphere	SRVKGVALCLFTCVGVLQTSAGPAAAGPGEGNKEPKTLTVTKECGTATLEQGELNYCTVLESNFRALRGAKIRYFGPGFFKADHPFLDSWVVIESDQGEGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTVTTVDGTIWHWNGSTSSGD
Ga0207708_100331603	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKPSRVKGVALCLFTCVGVLQTSAGPAAAGPGEGNKESKTLTVTKECGTATLEQGELNYCTVLESNFRALRGAKIRYFGPGFFKADHPFLDSWVVIESDQGEGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTVTTVDGTIWHWNGSTSSGD
Ga0207708_102098423	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKPSRVALFVVAGAIALQMSVGVVADHPGAGNEEAKPLTVTKDCGIATLVPGELRYCTVTESNFRPLRGAKIRYFGPGFTTPDHPYLDSWVVIETEQGGGGTAFGHCLVRGVPAPLGACQFTGGSGSLQGFKADVTVTKAD
Ga0207648_122306941	3300026089	Miscanthus Rhizosphere	MKPSRIPSHAALFVFACAIALQMSSGLVADGPGLRNDESQTLRLTKECGTATLAPGELGYCTVIASNFRPLRGAKIRYFGPGFFTANHPFLDSWVVIESDEGGTAFGHCLVRGVPDVLGACQFTGGSGSLKGFKADVTVTTVDGTIWHWNGAISSDD
Ga0207674_109998121	3300026116	Corn Rhizosphere	MSVGVVADHPGAGNEEAKPLTVTKDCGIATLVPGELRYCTVTESNFRPLRGAKIRYFGPGFTTPDHPYLDSWVVIETEQGGGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTVTTVDGTIWHWNGSTSSGD
Ga0207675_1006234201	3300026118	Switchgrass Rhizosphere	MKPGSMPSGVVLSVFACAIALQMSSGLVAGGPGGGNDESKTLTLTKDCSSVPLSPGELKYCTVIASNFRALRGAKIRYFGPGFFAPNHPFLDSWVVIESEQGGGGTAFGHCLVRGVPEALGACQFTGGSGSLKGFKADVTVTTMDSTIWYWNGAASHD
Ga0209286_10085053	3300027713	Freshwater Sediment	MKTTLRVALFVFLCVVALQMSSALAAGGAGVGSRESRTLTVTKECGTATLAPGELNYCTVTESNFRPLRGAKIRYFGPGFFTADHPFLDSWVVIESEQGGGGTAFGHCLVRGVPDVLGACQFTGGSGSLKGFKADVTVTTVDGTIWNWRGAASADD
Ga0209811_100566703	3300027821	Surface Soil	MKPSRVAVFVVAGVIALQMSPGLVAGGPGVGDEESKTLTLTKECGTAILAPGELRYCTVTASNFRPLKGAKIRYFGPGFFTPDHPFLDSWVVIESEHGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTLDG
Ga0207428_100356173	3300027907	Populus Rhizosphere	MKPSRVALFVVAGAIALQMSVGVVADHPGAGNEEAKPLTVTKDCGIATLVPGELRYCTVTESNFRPLQGAKIRYFGPGFTTPDHPYLDSWVVIETEQGGGGTAFGHCLVRGVPAPLGACQFTGGSGSLQGFKADVTVTKADGTIWHWNGAMSSRD
Ga0247825_107181361	3300028812	Soil	MKPRCLQSRYVVFAIACVVAVQMSPGVAAGAGAGNQTVPGFVAGSSGAGNKESKTLTVTKKCGGTTLAPGELDYCTVIASNFHPLRGAKIRYFGPGFFAENHLFLDSWVVIESDQGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTVNTADGTIWYWNGAASSDD
Ga0307408_1007509572	3300031548	Rhizosphere	MKPSRVAVFVIAGVIALPMSARVVADHPGDGNDEAKTLTVTKDCGTATLVPGELRYCTVTESNFPPLRGAKIRYFGPGFTTPDHPYLDSWVVIESEQGGGTAFGHCLVRGVPAPLGACQFTGGSGSLKGFKADVTVTKADGTIWHWNGAMSSHD
Ga0310892_108923782	3300031858	Soil	MKPSRITSGVALCVLACVIALQTSASLTAAGDGAENKRVRTLTVTKECGTATIAPGELGYCTVLESNFRALRGAKIRYFGPGFFTADHPFLDSWVVIESDQGEGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFKADVTV
Ga0310900_118384641	3300031908	Soil	MKPSRITSGVALCVLACVIALQTSASLTAAGDGAENKRVRTLTVTKECGTATLAPGELGYCTVLESNFRALRGAKIRYFGPGFFTADHPFLDSWVVIESDQGEGGTAFGHCLVRGVPDVLGACQFTGG
Ga0310890_112420191	3300032075	Soil	MKPSRITSGVALCVLACVIALQTSASLTAAGDGAENKRVRTLTVTKECGTATLAPGELGYCTVLESNFRALRGAKIRYFGPGFFTADHPFLDSWVVIESDKGDGGTAFGHCLVRGVPDALGACQFTGGSGSLRGFKADVTVTTVG
Ga0315912_108067131	3300032157	Soil	MRSRFFVLATTCLVALQMSPGLVASRSGAGNKESKTLTVTKECGTATLAPGELGYCTILDSNFRPLEGAKIRYFGPGFFTGNHPFLDSWVVIESDQGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLKGFKADVTVTTVDGTIWHWNGAFSGDD
Ga0315281_106967142	3300032163	Sediment	MKLSRIQSLVLFAFACVVALQMSPGLAAGGPGAGDKESKSLTVTKECGTATLAPGELDYCTVTASNFRALRGAKIRYFGPGFFTQNHLFLDSWVVIESNQGGGGTAFGHCLVRGIPEVLGACQFTGGSGSLKGFKADVTVTTVDGTIWHWNGAVSSDD
Ga0315281_116698142	3300032163	Sediment	PGDGNKESKTLTVTKECGTATLHPGELDYCVVTESNFRPLRGAKIRYFGPGFFSATHPFLDSWVVIETEQGGGGTAFGHCLVRGVPEVLGACQFTGGSGSLRGFQADVTVTTVDGTIWHWKGAVSSND
Ga0310896_105543931	3300032211	Soil	MKPSRITSGVALCVLACVIALQTSASLTAAGDGAENKRVRTLTVTKECGTATLAPGELGYCTVLESNFRALRGAKIRYFGPGFFTADHPVLDSWVVIESDKGDGGTAFGHCLVRGVPDALGACQFTGGSGSLRGFKADVTVTTVGGGIWHWNGSASLGD
Ga0335084_101575513	3300033004	Soil	MKPSSVQSRFVLVAFACMVAFQMAPRLAAGSGVGNRESKTLTVTKECGTATLSPGELSYCTVVESNFRPLKGAKIRYFGPGFFTPDHPFLDSWVVIESEQAGGGTAFGHCLVRGVPDVLGACQFTGGSGSLRGFQADVTVTTVDGTIWHWNGAISNND
Ga0370495_0078616_389_862	3300034257	Untreated Peat Soil	MKPIRVQSRVALCVFACVIALQMSPGLAAGDSGWGSNETKTLTLTKECGTAKLAQGELSYCTVTASNFRALRGAKIRYFGPGFFTMDHPYLDSWVVIESKDGGGTAFGHCLVRGVPSVLGACQFTGGSGSLKGFKADVTVTTTDGTIWHWNGAASSD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087417

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences