NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F087411

Metagenome / Metatranscriptome Family F087411

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F087411
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 65 residues
Representative Sequence RTKTYVTQEATRLCAELFALSGGRHYRRDGRLARTLAASFAGTALRPPLPLALDTLVQQFSSE
Number of Associated Samples 100
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 95.45 %
% of genes from short scaffolds (< 2000 bps) 88.18 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (80.909 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(12.727 % of family members)
Environment Ontology (ENVO) Unclassified
(27.273 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.364 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 39.56%    β-sheet: 0.00%    Coil/Unstructured: 60.44%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF13420Acetyltransf_4 34.55
PF01980TrmO 5.45
PF06418CTP_synth_N 2.73
PF00300His_Phos_1 2.73
PF07676PD40 1.82
PF00593TonB_dep_Rec 0.91
PF02770Acyl-CoA_dh_M 0.91
PF00916Sulfate_transp 0.91
PF13679Methyltransf_32 0.91
PF13709DUF4159 0.91
PF00753Lactamase_B 0.91
PF07883Cupin_2 0.91
PF13777Obsolete Pfam Family 0.91
PF13669Glyoxalase_4 0.91
PF06778Chlor_dismutase 0.91
PF03009GDPD 0.91
PF01906YbjQ_1 0.91
PF027395_3_exonuc_N 0.91
PF02515CoA_transf_3 0.91
PF00296Bac_luciferase 0.91
PF01261AP_endonuc_2 0.91
PF03358FMN_red 0.91
PF05988DUF899 0.91
PF00378ECH_1 0.91
PF08308PEGA 0.91
PF07715Plug 0.91
PF05168HEPN 0.91
PF01243Putative_PNPOx 0.91
PF13472Lipase_GDSL_2 0.91
PF13410GST_C_2 0.91
PF00092VWA 0.91
PF00206Lyase_1 0.91
PF01796OB_aCoA_assoc 0.91
PF00072Response_reg 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG1720tRNA (Thr-GGU) A37 N6-methylaseTranslation, ribosomal structure and biogenesis [J] 5.45
COG0504CTP synthase (UTP-ammonia lyase)Nucleotide transport and metabolism [F] 2.73
COG02585'-3' exonuclease Xni/ExoIX (flap endonuclease)Replication, recombination and repair [L] 0.91
COG0393Uncharacterized pentameric protein YbjQ, UPF0145 familyFunction unknown [S] 0.91
COG0584Glycerophosphoryl diester phosphodiesteraseLipid transport and metabolism [I] 0.91
COG0659Sulfate permease or related transporter, MFS superfamilyInorganic ion transport and metabolism [P] 0.91
COG1545Uncharacterized OB-fold protein, contains Zn-ribbon domainGeneral function prediction only [R] 0.91
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 0.91
COG1895HEPN domain protein, predicted toxin of MNT-HEPN systemDefense mechanisms [V] 0.91
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.91
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.91
COG2233Xanthine/uracil permeaseNucleotide transport and metabolism [F] 0.91
COG2250HEPN domain protein, predicted toxin of MNT-HEPN systemDefense mechanisms [V] 0.91
COG2252Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) familyNucleotide transport and metabolism [F] 0.91
COG3253Coproheme decarboxylase/chlorite dismutaseCoenzyme transport and metabolism [H] 0.91
COG4312Predicted dithiol-disulfide oxidoreductase, DUF899 familyGeneral function prediction only [R] 0.91

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms83.64 %
UnclassifiedrootN/A16.36 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001431|F14TB_104830742All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria582Open in IMG/M
3300002122|C687J26623_10192225All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium565Open in IMG/M
3300003324|soilH2_10104424All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2218Open in IMG/M
3300004114|Ga0062593_103196368All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300004463|Ga0063356_100038910All Organisms → cellular organisms → Bacteria4678Open in IMG/M
3300005328|Ga0070676_11052806All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium613Open in IMG/M
3300005338|Ga0068868_100755921Not Available874Open in IMG/M
3300005356|Ga0070674_100257620All Organisms → cellular organisms → Bacteria1373Open in IMG/M
3300005356|Ga0070674_100566835All Organisms → cellular organisms → Bacteria955Open in IMG/M
3300005364|Ga0070673_101815948All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300005366|Ga0070659_101175346Not Available678Open in IMG/M
3300005438|Ga0070701_10288796Not Available1004Open in IMG/M
3300005456|Ga0070678_101249303Not Available690Open in IMG/M
3300005466|Ga0070685_10176341All Organisms → cellular organisms → Bacteria1373Open in IMG/M
3300005529|Ga0070741_10564230All Organisms → cellular organisms → Bacteria → Acidobacteria1021Open in IMG/M
3300005529|Ga0070741_11244993All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium625Open in IMG/M
3300005536|Ga0070697_100106700Not Available2330Open in IMG/M
3300005544|Ga0070686_100565169Not Available892Open in IMG/M
3300005545|Ga0070695_101619599All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium541Open in IMG/M
3300005549|Ga0070704_100680758Not Available910Open in IMG/M
3300005556|Ga0066707_10935894Not Available530Open in IMG/M
3300005578|Ga0068854_100583901All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium952Open in IMG/M
3300005615|Ga0070702_100137286All Organisms → cellular organisms → Bacteria1553Open in IMG/M
3300006196|Ga0075422_10321230All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300006237|Ga0097621_101964850All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300006852|Ga0075433_10080989Not Available2862Open in IMG/M
3300006854|Ga0075425_101397488Not Available792Open in IMG/M
3300006871|Ga0075434_101774717Not Available624Open in IMG/M
3300006876|Ga0079217_10841963All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium644Open in IMG/M
3300006903|Ga0075426_11323252All Organisms → cellular organisms → Bacteria → Acidobacteria547Open in IMG/M
3300007004|Ga0079218_10087583All Organisms → cellular organisms → Bacteria2092Open in IMG/M
3300007004|Ga0079218_12577940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium603Open in IMG/M
3300009012|Ga0066710_103877100All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium561Open in IMG/M
3300009087|Ga0105107_10119583All Organisms → cellular organisms → Bacteria1856Open in IMG/M
3300009095|Ga0079224_103898177All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300009137|Ga0066709_101393955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1020Open in IMG/M
3300009148|Ga0105243_10238392All Organisms → cellular organisms → Bacteria1617Open in IMG/M
3300009156|Ga0111538_10986286All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1066Open in IMG/M
3300009162|Ga0075423_10312079All Organisms → cellular organisms → Bacteria1648Open in IMG/M
3300009174|Ga0105241_11834738All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium593Open in IMG/M
3300009789|Ga0126307_10909365All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300009873|Ga0131077_10548801All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300010041|Ga0126312_10972317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium621Open in IMG/M
3300010041|Ga0126312_11227022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium553Open in IMG/M
3300010362|Ga0126377_12843147Not Available558Open in IMG/M
3300010362|Ga0126377_13611484All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300010396|Ga0134126_11606781All Organisms → cellular organisms → Bacteria → Acidobacteria715Open in IMG/M
3300010398|Ga0126383_10657940All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300010877|Ga0126356_11412735All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300012355|Ga0137369_11068483All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium530Open in IMG/M
3300012493|Ga0157355_1037905All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium528Open in IMG/M
3300012685|Ga0137397_10643034All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300012961|Ga0164302_11830858All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300012964|Ga0153916_11041197All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300013764|Ga0120111_1114369All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300013765|Ga0120172_1017686All Organisms → cellular organisms → Bacteria2134Open in IMG/M
3300014310|Ga0075331_1058298All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium871Open in IMG/M
3300014875|Ga0180083_1105359All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium619Open in IMG/M
3300015360|Ga0163144_10079673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi5410Open in IMG/M
3300015371|Ga0132258_10333856All Organisms → cellular organisms → Bacteria3743Open in IMG/M
3300015372|Ga0132256_100737140All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1101Open in IMG/M
3300015374|Ga0132255_100181241All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2966Open in IMG/M
3300015374|Ga0132255_102919839All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300015374|Ga0132255_105658494All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300017655|Ga0182739_1253806All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium677Open in IMG/M
3300017695|Ga0180121_10340020All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi575Open in IMG/M
3300017965|Ga0190266_10126315All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300017965|Ga0190266_10294731All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300018053|Ga0184626_10434271All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300018067|Ga0184611_1053716All Organisms → cellular organisms → Bacteria1348Open in IMG/M
3300018422|Ga0190265_12717135All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium591Open in IMG/M
3300018429|Ga0190272_11567894All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300018432|Ga0190275_10884241All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium961Open in IMG/M
3300018432|Ga0190275_13479784All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCGC AG-212-C10510Open in IMG/M
3300018468|Ga0066662_11984815Not Available609Open in IMG/M
3300018481|Ga0190271_10218288All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium1915Open in IMG/M
3300019874|Ga0193744_1010006Not Available1732Open in IMG/M
3300020193|Ga0194131_10100137All Organisms → cellular organisms → Bacteria1578Open in IMG/M
3300021078|Ga0210381_10395145All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium510Open in IMG/M
3300021339|Ga0193706_1006452All Organisms → cellular organisms → Bacteria4328Open in IMG/M
3300025901|Ga0207688_10127212All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1491Open in IMG/M
3300025907|Ga0207645_11094158All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium538Open in IMG/M
3300025912|Ga0207707_10516929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1017Open in IMG/M
3300025922|Ga0207646_10472674All Organisms → cellular organisms → Bacteria1131Open in IMG/M
3300025937|Ga0207669_10931499All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300026023|Ga0207677_11089797Not Available728Open in IMG/M
3300026041|Ga0207639_11360776All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium666Open in IMG/M
3300026095|Ga0207676_11151062All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium768Open in IMG/M
3300026095|Ga0207676_12581400All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria504Open in IMG/M
3300026116|Ga0207674_10554808Not Available1110Open in IMG/M
3300026285|Ga0209438_1001218All Organisms → cellular organisms → Bacteria8389Open in IMG/M
3300027362|Ga0208320_1038737All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium549Open in IMG/M
3300027886|Ga0209486_10859219All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium598Open in IMG/M
3300028812|Ga0247825_11148010All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300028819|Ga0307296_10683573Not Available561Open in IMG/M
3300030521|Ga0307511_10454015All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300031547|Ga0310887_11135495All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300031740|Ga0307468_102493791All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria506Open in IMG/M
3300031852|Ga0307410_11594931All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300031854|Ga0310904_10478258All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium831Open in IMG/M
3300031908|Ga0310900_10038931All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2700Open in IMG/M
3300031965|Ga0326597_12088842All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium521Open in IMG/M
3300032075|Ga0310890_11357230All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium583Open in IMG/M
3300032157|Ga0315912_11243327All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium589Open in IMG/M
3300032180|Ga0307471_100718873All Organisms → cellular organisms → Bacteria1164Open in IMG/M
3300032205|Ga0307472_100504111All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1044Open in IMG/M
3300033233|Ga0334722_10251175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1299Open in IMG/M
3300033416|Ga0316622_100505891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1377Open in IMG/M
3300034354|Ga0364943_0307450All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium600Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil12.73%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.36%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil4.55%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.55%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.64%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.64%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.64%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.73%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.73%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.73%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.73%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.82%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.82%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.82%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.82%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.82%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.82%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.82%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.91%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.91%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.91%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat0.91%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.91%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.91%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.91%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.91%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil0.91%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.91%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.91%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.91%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.91%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.91%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.91%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.91%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.91%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.91%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.91%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.91%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.91%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.91%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.91%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.91%
WastewaterEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater0.91%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.91%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002122Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009095Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009873Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plantEngineeredOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010877Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012493Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300013764Permafrost microbial communities from Nunavut, Canada - A28_35cm_6MEnvironmentalOpen in IMG/M
3300013765Permafrost microbial communities from Nunavut, Canada - A30_80cm_6MEnvironmentalOpen in IMG/M
3300014310Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1EnvironmentalOpen in IMG/M
3300014875Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_1_16_10DEnvironmentalOpen in IMG/M
3300015360Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017655Enriched backyard soil microbial communities from Emeryville, California, USA - eDNA 5th pass 30_C BE-Lig BY (version 2)EnvironmentalOpen in IMG/M
3300017695Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)EnvironmentalOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019874Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1EnvironmentalOpen in IMG/M
3300020193Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120mEnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021339Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300027362Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299 (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300030521Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EMHost-AssociatedOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033233Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottomEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300034354Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TB_10483074213300001431SoilPGRGPAYAALALRTKTYVTQEATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLQQQFTAD*
C687J26623_1019222513300002122SoilLRMKTYVTQEATKLCAELFALSGGRHYRRNGRLARTLAASFAGTALRPPLALALDTLVQQFSSE*
soilH2_1010442413300003324Sugarcane Root And Bulk SoilRVLRTKTHVTAEATKLCAELFSLAGGRHYRRSSEVARFLADSFAGTALRPPLPLALETLAEKFTLDGDWR*
Ga0062593_10319636823300004114SoilYVTQEATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTAD*
Ga0063356_10003891013300004463Arabidopsis Thaliana RhizosphereLALRTKTYVTQEATRLCAELFALSGGRHYTRNGRLARTLAGAFAGTALRPPLPLALETLLQQFTAD*
Ga0070676_1105280623300005328Miscanthus RhizosphereLALRTKTYVTQEATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTAD*
Ga0068868_10075592133300005338Miscanthus RhizosphereYVTQEATRLCGELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTAD*
Ga0070674_10025762013300005356Miscanthus RhizospherePDYAARSLRTKTYVTQEATRLCAELFALSGGRHYKRDGRLARTLAASFAGTALRPPLPLALDTLVQQFSSE*
Ga0070674_10056683513300005356Miscanthus RhizosphereQYAARVLRTKTYVTQEATKLCAELFALGGGRNYRRTSRAARTLADSFAGTSLRPPLALALDSLLENFTLFDS*
Ga0070673_10181594823300005364Switchgrass RhizosphereGAGPAYASLALRTKTYVTQEATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTAD*
Ga0070659_10117534623300005366Corn RhizosphereLRTKTYVTQETTRLCAELFALSGGRHYKRDGRLARALTASFAGTALRPPLPLALDALVQQFGAE*
Ga0070701_1028879613300005438Corn, Switchgrass And Miscanthus RhizosphereLALRTKTYVTQEATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLVQQFTAD*
Ga0070678_10124930323300005456Miscanthus RhizosphereTKTYVTQETTRLCAELFALSGGRHYKRDGRLARALTASFAGTALRPPLPLALDALVQQFGAE*
Ga0070685_1017634113300005466Switchgrass RhizosphereRTKTYVTQEATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTAD*
Ga0070741_1056423023300005529Surface SoilVLRTKTYVTQEATKLCAELFALGGGRNYRRTSPVARLLADSFAGTSLRPPLALALDLLVQNFTLGDIEHDLAAG*
Ga0070741_1124499313300005529Surface SoilGAEYGARVLRAKTYVTQESTRLCAELFALSGGRHYTRGGRLARLLADSFAGTALRPPLALGLDTLVEQFSLGPLA*
Ga0070697_10010670013300005536Corn, Switchgrass And Miscanthus RhizosphereYVTQESTRLCAELFALSGGRHYKRDGRLARTLAASFAGTALRPPLPLALDTLVQQFSAE*
Ga0070686_10056516913300005544Switchgrass RhizosphereVTQEATRLCGELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTAD*
Ga0070695_10161959913300005545Corn, Switchgrass And Miscanthus RhizosphereGAGPDYAARSLRTKTYVTQEATRLCAELFALSGGRHYKRDGRLARTLAASFAGTALRPPLPLALDTLVQQFSSE*
Ga0070704_10068075813300005549Corn, Switchgrass And Miscanthus RhizosphereTQEATRLCAELFALSGGRHYRRDGRLARTLAASFAGTALRPPLPLALDTLVQQFSSE*
Ga0066707_1093589423300005556SoilKLCAELFALSGGRHYTRSGALARALADSFAGTALRPPLALALDTLTEQFQL*
Ga0068854_10058390113300005578Corn RhizosphereAGPAYAALALRTKTYVTQEATGLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLVQQFTAD*
Ga0070702_10013728613300005615Corn, Switchgrass And Miscanthus RhizosphereRTKTYVTQEATRLCAELFALSGGRHYRRDGRLARTLAASFAGTALRPPLPLALDTLVQQFSSE*
Ga0075422_1032123013300006196Populus RhizosphereLALRTKTYVTQEATRLCAELFALSGGRHYTRNGRLARTLAGAFAGTALRPPLPLGLETLLQQFTAD*
Ga0097621_10196485023300006237Miscanthus RhizosphereGAGPAYASLALRTKTYVTQEATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTTD*
Ga0075433_1008098953300006852Populus RhizosphereKTYVTQESTRLCAELFALSGGRHYKRDGRLARTLAASFAGTALRPPLPLALDILVQQFSAE*
Ga0075425_10139748823300006854Populus RhizospherePAYAALALRTKTYVTQEATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTAD*
Ga0075434_10177471723300006871Populus RhizosphereSTRLCAELFALSGGRHYKRDGRLARTLAASFAGTALRPPLPLALDTLVQQFSAE*
Ga0079217_1084196323300006876Agricultural SoilCAELFALGGGRNYRRTSLVARMLADSFAGTALRPPLALALDRLIENFSLGDAESHLTVNGSS*
Ga0075426_1132325223300006903Populus RhizosphereLCAELFALGGGRNYRRTSPVARLLADSFAGTSLRPPLALALDLLVQNFTLGGIEDDPAAGSN*
Ga0079218_1008758323300007004Agricultural SoilPAAGPRYAARVLRAKTYVTQEAAKLCAELFALGGGRSYRRTSRVARTLADSFAGAALRPPLTLALDSLVENFTLGSAEE*
Ga0079218_1257794013300007004Agricultural SoilLRTKTYVSQEATKLCAELFALGGGRHYRRNDRVARTLADSFAGTALRPPLALALENLVENFSLGGAE*
Ga0066710_10387710013300009012Grasslands SoilQEATRLCGELFALSGGRHYTRDGRLARTLAASFAGTALRPPLPLALDTLLQQFSAE
Ga0105107_1011958313300009087Freshwater SedimentRAKTYVTQEATKLCAELFALGGGRNYRRSNRIARTLADSFAGTALRPPLALALDMLVENFSLGAAEE*
Ga0079224_10389817723300009095Agricultural SoilVTQEATRLCAELFALSGGRHYRRTSSVARLLADSFAGTALRPPLPLALDSLVEQFALD*
Ga0066709_10139395533300009137Grasslands SoilARALRTKTYVTQEATRLCGELFALSGGRHYTRDGRLARTLAASFAGTALRPPLPLALDTLLQQFSA*
Ga0105243_1023839233300009148Miscanthus RhizosphereYAARALRTKTYVTQEATKLCAELFALSGGRHYKRDGRLARTLASSFAGTALRPPLPLALDTLVQQFSEE*
Ga0111538_1098628623300009156Populus RhizosphereLCAELFALSGGRNYRRTSAVARALADSFAGTSLRPPLALALDGLVESFSLGEAAAP*
Ga0075423_1031207913300009162Populus RhizosphereGAGPAYAALALRTKTYVTQEATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTAD*
Ga0105241_1183473813300009174Corn RhizosphereYAALALRTKTYVTQEATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTAD*
Ga0126307_1090936513300009789Serpentine SoilEATKLSAELFALGGGRHYTRTGALSRALAASFAGTALRPPLPLALDTLVQSFTLGELAT*
Ga0131077_1054880133300009873WastewaterRVLRTKTFVSQESVRLCADLFALSGGRHYVRGGKLSGLMADVFAGTALRPPLALALDMLVDQFEIG*
Ga0126312_1097231723300010041Serpentine SoilYVTQEATKLSAELFALSGGRHYTRTGAVARALAASFAGTALRPPLPLALDTLVQNFSLGELGT*
Ga0126312_1122702213300010041Serpentine SoilMKTYVTQEATKLCAELFALSGGRHYSRNSAVARAFADAFAGTALRPPLALGLETLTEQFELT*
Ga0126377_1284314723300010362Tropical Forest SoilYAALALRTKTYVTQEATALCAQLFALSGGRHYRRDGRLARALAASFAGTALRPPLPLALDTLVQQFSAD*
Ga0126377_1361148423300010362Tropical Forest SoilTYVTQESTRLCAELFALSGGRHYKRDGRLARLLAASFAGTALRPPLPLALDALIQQFPVHSA*
Ga0134126_1160678113300010396Terrestrial SoilSQEATKLCAELFALGGGRSYTRTHRVARALADSFAGTALRPPLPLALDALVQSFSLGALAE*
Ga0126383_1065794013300010398Tropical Forest SoilISAELFALSGGRHYTRASAVARAFADAFAGTALRPPLPLALDTICEQFATDDLTDV*
Ga0126356_1141273513300010877Boreal Forest SoilEATRLCGELFALSGGRHYARTSGIARALADSFAGTALRPPLPLAIDTLTEAFTVDALDEV
Ga0137369_1106848323300012355Vadose Zone SoilAGPVYAARALRTKTYVTQEATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFAAE*
Ga0157355_103790513300012493Unplanted SoilGPAYAALALRTKTYVTQEATRLCGELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTTD*
Ga0137397_1064303423300012685Vadose Zone SoilVLRTKTYVTQEATRLCAELFALSGGRHYKRDGRLARALAASFAGTALRPPLPLALDTLVQQFSSE*
Ga0164302_1183085823300012961SoilTKLCAELFALSGGRHYTRSGALARALADSFAGTALRPPLALALDTLTEQFQL*
Ga0153916_1104119713300012964Freshwater WetlandsAELFALGGGRNYRRSSAVARALADSFAGTALRPPLAPALDTLMESFELDVIETAGR*
Ga0120111_111436913300013764PermafrostEYAARVLRTKTYVTQEATKLAAELFALGGGRHYTRTGRLARTLADSFAGTALRPPLALALDSLVQNFSLGPLAIE*
Ga0120172_101768633300013765PermafrostTKLAAELFALGGGRHYTRTGRLARTLADSFAGTALRPPLALALDSLVQNFTLGPLAIE*
Ga0075331_105829813300014310Natural And Restored WetlandsDPRSMTMRVIRTKTYVTQESTKLCAELFALSGGRHFSRTSPVARALADSFTGTALRPPLALALDMLVENFAV*
Ga0180083_110535923300014875SoilGPAYAARALRTKTYVTQEATKLCAELFALSGGRHYKRDGRLARALASSFAGTALRPPLPLALDTLMQQFSEE*
Ga0163144_1007967383300015360Freshwater Microbial MatRVLRTKTYVTQESTKLCAELFALGGGRHYRRSGVVARTVADAFAGTALRPPLPLALEMLAENFSLGPLNDFSD*
Ga0132258_1033385613300015371Arabidopsis RhizosphereAYAALVLRTKTYVTQEATRLCAELFALGGGRHYTRNGRLARTLAGAFAGTALRPPLPLALETLLQQFTAD*
Ga0132256_10073714013300015372Arabidopsis RhizosphereTQEATKLCAELFALGGGRNYRRTSPVARLLADSFAGTSLRPPLALALDLLVQNFTLGDLDNEGAAS*
Ga0132255_10018124123300015374Arabidopsis RhizosphereLFALGGGRNYRRTSPVARLLADSFAGTSLRPPLALALDLLVQNFTLGDLDNDGAAS*
Ga0132255_10291983923300015374Arabidopsis RhizosphereVVRAKTHVTQESTRLCADLFALSGGRHYRRTSPAARLLAASFAGTALRPPLPLALDALVENFSLADQHE*
Ga0132255_10565849423300015374Arabidopsis RhizosphereAAGPAYAARVLRTKTHVSSESTKLCAELFALGGGRQYRRNGTAARFLADSFAGTALRPPLMLALDTLVEHFEQPEL*
Ga0182739_125380613300017655SoilKTYVSQEATKLCADLFALGGGRHYRRNDIAARLLADSFAGTALRPPLALGLDGLLAQFED
Ga0180121_1034002013300017695Polar Desert SandAGQVLRTKTYVSQEATKLAAELFALSGGRHYRRDGKLARTLADSFAGTALRPPLPLALEALIEA
Ga0190266_1012631523300017965SoilVLRTKTYVTQEATKLCAELFALSGGRHYSRGSAVARTFADAFAGTALRPPLALGLETLVEQFSLE
Ga0190266_1029473113300017965SoilVTQEATKLCAELFALGGGRNYRRTSLVARMLADSFAGTSLRPPLALALDRLVESFSLGEA
Ga0184626_1043427113300018053Groundwater SedimentTQEATKLCAELFALSGGRHYKRDGRLARTLASSFAGTALRPPLPLALDTLVQQFSEE
Ga0184611_105371643300018067Groundwater SedimentRVLRAKTYVAQEATKLCAELFALGGGRNYRRTSRAARTLADSFAGTSLRPPLALALDSLIENFTLFDS
Ga0190265_1271713523300018422SoilGSGAEYAALVLRTKTYVSQEATKLCAELFALGGGRNYRRNNFVARTLADSFAGTALRPPLTLALESLVENFSLGNAAAW
Ga0190272_1156789423300018429SoilAELFALSGGRHYSRSSPVARAFADAFAGTALRPPLALGLETLVEQFNLEISSDEFRSAAG
Ga0190275_1088424133300018432SoilSAEATKLCAELFAVSGGRHYRRGGPAARLLADAFAGTALRPPLALALDGLVEQFEA
Ga0190275_1347978413300018432SoilTHVTQEATRICADLFALSGGRHYTRSGRLSRTLADAFAGTALRPPLPLALDMLVDGFSLGDLDDSARGEEQPTYIVGA
Ga0066662_1198481513300018468Grasslands SoilRDLAMRVLRTKTYVTQESTKLCAELFALSGGRHYTRSGVLARALADSFAGTALRPPLALALDTLTEQFQL
Ga0190271_1021828843300018481SoilRTKTYVTQEATKLCAELFSLGGGRNYRRTSLVARMLADSFAGTSLRPPLNLARDRLIESFSLGDAE
Ga0193744_101000633300019874SoilKTYVTQEATKLCAELFALSGGRHYTRDGRLARLLASSFAGTALRPPLALALETLVQQFS
Ga0194131_1010013733300020193Freshwater LakeVLRTNTYVTQDATKLAAELFALSGGRHYRRTSPVARLLADSFAGTALRPPLSLALDTLVEQFGSD
Ga0210381_1039514513300021078Groundwater SedimentKTYVTQEAIKLCAELFALSGGRHYKRDGRLARALASSFAGTALRPPLPLALDTLVQQFSS
Ga0193706_100645263300021339SoilYAARVLRTKTYVTQEATKLCAELFSLGGGRNYRHTSLVARMLADSFAGTFLRPPLTLALDRLVESFSIGDAE
Ga0207688_1012721213300025901Corn, Switchgrass And Miscanthus RhizospherePAYAARALRTKTYVTQEATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTAD
Ga0207645_1109415813300025907Miscanthus RhizosphereATKLCAELFALSGGRHYKRDGRLARALAASFAGTALRPPLPLALDSLVQQFSSD
Ga0207707_1051692913300025912Corn RhizosphereAYAARVLRMKTYVTQESTRLCAELFALAGGRHYRRTSRVAKLLADAFAGTALRPPLSLALETLSESFALE
Ga0207646_1047267413300025922Corn, Switchgrass And Miscanthus RhizospherePAYAARVLRTKTYVTQESTRLCAELFALSGGRHYKRDGRLARTLAASFAGTALRPPLPLALDTLVQQFSAE
Ga0207669_1093149923300025937Miscanthus RhizospherePAAGPQYAARVLRTKTYVTQEATKLCAELFALGGGRNYRRTSRAARTLADSFAGTSLRPPLALALDSLLENFTLFDS
Ga0207677_1108979723300026023Miscanthus RhizosphereYVTQEATRLCGELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTAD
Ga0207639_1136077613300026041Corn RhizosphereYVTQEATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTAD
Ga0207676_1115106213300026095Switchgrass RhizosphereRTKTYLTQEATKLCAELFALSGGRHYKRDGRLARALAASFAGTALRPPLPLALDSLVQQFSSD
Ga0207676_1258140023300026095Switchgrass RhizosphereRTKTYVTQEATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTAD
Ga0207674_1055480813300026116Corn RhizospherePGAGPAYASLALRTKTYVTQEATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLLQQFTAD
Ga0209438_1001218123300026285Grasslands SoilYAARVLRTKTYVTQEATRLCAELFALSGGRHYKRDGRLARTLAASFAGTALRPPLPLALDTLVQQFSSE
Ga0208320_103873723300027362SoilLRTKTYVTQEATKLCAELFALSGGRHYKRDGRLARALASSFAGTALRPPLPLALDTLMQQFSEE
Ga0209486_1085921913300027886Agricultural SoilTKTYVSQEATKLCAELFALGGGRHYRRNDRVARTLADSFAGTALRPPLALALENLVENFSLGGAE
Ga0209415_1057570723300027905Peatlands SoilIAADLFALSGGRHYTRTGHVARSLAGVFAGTALRPPLPLALDMLVDGFSLGPAEP
Ga0247825_1114801023300028812SoilKLCAELYALGGGRHYTRTGRLARALAASFAGTALRPPLPLALDTLVLHFGETDDEWSTAG
Ga0307296_1068357323300028819SoilAARALRTKTYVTQEATRLCAELFALSGGRHYTRDGRLARTLAASFAGTALRPPLPLALDTLLQQFSAE
Ga0307511_1045401513300030521EctomycorrhizaARVLRTKTFVAQEATRLCADLFALSGGRHYVRGGRLSSAMADVFAGTALRPPLALALDALAEGFAFE
Ga0310887_1113549523300031547SoilVTQEATKLCAELFALGGGRNYRRTGRVARIFADSFAGTSLRPPLALALDSLLDNFPDNVTPGGIE
Ga0307468_10249379123300031740Hardwood Forest SoilTKTFVTQEATRLCAELFALSGGRHYKRDSRLARALAASFAGTALRPPLPLALETLVQQFTPD
Ga0307410_1159493113300031852RhizosphereRTKTYVTQEATRLCAELYALGGGRHYTRTGRLARALSASFAGTALRPPLPLALDILVQQFGEIDDRWSAAGA
Ga0310904_1047825813300031854SoilEATGLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLVQQFTAD
Ga0310900_1003893113300031908SoilATRLCAELFALSGGRHYTRNGRLARTLAAAFAGTALRPPLPLALETLVQQFTAD
Ga0326597_1208884213300031965SoilSHVSSEATKLCAELFALSGGRHYRRGDQAARLLADSFAGTALRPPLALALDGLVGQFDA
Ga0310890_1135723023300032075SoilAARMLRTKTYLTQEATKLCAELFALSGGRHYKRDGRLARALAASFAGTALRPPLPLALDSLVQQFSSD
Ga0315912_1124332723300032157SoilKLCAELFALGGGRNYRRTSVVARMLADSFAGTALRPPLALALDRLVENFSLGDAE
Ga0307471_10071887333300032180Hardwood Forest SoilLRTKTYVAQEATHLCAELFALSGGRHYRRDGRLARTLAASFAGTALRPPLPLALETMVQQFDG
Ga0307472_10050411133300032205Hardwood Forest SoilVTQEATRLCAELFALSGGRHYTRSGRLARTLAASFAGTALRPPLPLALETLLQQFAAD
Ga0334722_1025117523300033233SedimentVLRTKTYVSQESTKLCAELFALSGGGHYRASDPLARLLADSFAGTSLRPPLPLALDMLSQELVIPDLDKLRTS
Ga0316622_10050589113300033416SoilAARVLRTKTHVTQEAAKLCAELFALSGGRHYRRTSAVARGLADAFAGTALRPPLPLGLDTLVEQFSLGDLDG
Ga0364943_0307450_3_2033300034354SedimentRALRTKTYVTQEATKLCAELFALSGGRHYKRDGRLARALASSFAGTALRPPLPLALDTLMQQFSEE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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