Basic Information | |
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Family ID | F087406 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 110 |
Average Sequence Length | 65 residues |
Representative Sequence | MKTPQADGSSAPLNATEKPRVPPKKRRGEKLDRGDAHIGATEDQVSDTQAPTGEAYKDEPKQG |
Number of Associated Samples | 83 |
Number of Associated Scaffolds | 110 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 73.64 % |
% of genes near scaffold ends (potentially truncated) | 39.09 % |
% of genes from short scaffolds (< 2000 bps) | 79.09 % |
Associated GOLD sequencing projects | 75 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.16 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (60.909 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.818 % of family members) |
Environment Ontology (ENVO) | Unclassified (40.909 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (64.545 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.16 |
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Pfam ID | Name | % Frequency in 110 Family Scaffolds |
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PF08241 | Methyltransf_11 | 10.00 |
PF13489 | Methyltransf_23 | 3.64 |
PF04542 | Sigma70_r2 | 3.64 |
PF12543 | DUF3738 | 1.82 |
PF04307 | YdjM | 0.91 |
PF00582 | Usp | 0.91 |
PF01494 | FAD_binding_3 | 0.91 |
PF03449 | GreA_GreB_N | 0.91 |
PF14622 | Ribonucleas_3_3 | 0.91 |
PF03592 | Terminase_2 | 0.91 |
PF12867 | DinB_2 | 0.91 |
PF07366 | SnoaL | 0.91 |
PF07228 | SpoIIE | 0.91 |
PF00069 | Pkinase | 0.91 |
COG ID | Name | Functional Category | % Frequency in 110 Family Scaffolds |
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COG0515 | Serine/threonine protein kinase | Signal transduction mechanisms [T] | 3.64 |
COG0568 | DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) | Transcription [K] | 3.64 |
COG1191 | DNA-directed RNA polymerase specialized sigma subunit | Transcription [K] | 3.64 |
COG1595 | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family | Transcription [K] | 3.64 |
COG4941 | Predicted RNA polymerase sigma factor, contains C-terminal TPR domain | Transcription [K] | 3.64 |
COG0654 | 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases | Energy production and conversion [C] | 1.82 |
COG0578 | Glycerol-3-phosphate dehydrogenase | Energy production and conversion [C] | 0.91 |
COG0644 | Dehydrogenase (flavoprotein) | Energy production and conversion [C] | 0.91 |
COG0665 | Glycine/D-amino acid oxidase (deaminating) | Amino acid transport and metabolism [E] | 0.91 |
COG0782 | Transcription elongation factor, GreA/GreB family | Transcription [K] | 0.91 |
COG1988 | Membrane-bound metal-dependent hydrolase YbcI, DUF457 family | General function prediction only [R] | 0.91 |
COG3728 | Phage terminase, small subunit | Mobilome: prophages, transposons [X] | 0.91 |
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Name | Rank | Taxonomy | Distribution |
Unclassified | root | N/A | 60.91 % |
All Organisms | root | All Organisms | 39.09 % |
Visualization |
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 11.82% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 11.82% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 10.91% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 9.09% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 5.45% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 4.55% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 4.55% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 4.55% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 3.64% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 3.64% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 3.64% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 2.73% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 2.73% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 1.82% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.82% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.82% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.82% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 1.82% |
Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 0.91% |
Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 0.91% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 0.91% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.91% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere | 0.91% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 0.91% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.91% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.91% |
Sediment | Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment | 0.91% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.91% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.91% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.91% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.91% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2140918013 | Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies) | Environmental | Open in IMG/M |
3300000033 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300000890 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Host-Associated | Open in IMG/M |
3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Host-Associated | Open in IMG/M |
3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Host-Associated | Open in IMG/M |
3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Environmental | Open in IMG/M |
3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Host-Associated | Open in IMG/M |
3300006196 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 | Host-Associated | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006845 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 | Host-Associated | Open in IMG/M |
3300006846 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Host-Associated | Open in IMG/M |
3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
3300011332 | Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300011439 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2 | Environmental | Open in IMG/M |
3300012514 | Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510 | Environmental | Open in IMG/M |
3300012913 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2 | Environmental | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300018067 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex | Environmental | Open in IMG/M |
3300018083 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1 | Environmental | Open in IMG/M |
3300018466 | Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T | Environmental | Open in IMG/M |
3300018469 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T | Environmental | Open in IMG/M |
3300018481 | Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T | Environmental | Open in IMG/M |
3300019263 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019361 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2) | Environmental | Open in IMG/M |
3300021082 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo | Environmental | Open in IMG/M |
3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Host-Associated | Open in IMG/M |
3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) | Host-Associated | Open in IMG/M |
3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025930 | Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Environmental | Open in IMG/M |
3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300027880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes) | Host-Associated | Open in IMG/M |
3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
3300028592 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30 | Environmental | Open in IMG/M |
3300028812 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48 | Environmental | Open in IMG/M |
3300031538 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1 | Environmental | Open in IMG/M |
3300031908 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1 | Environmental | Open in IMG/M |
3300031940 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2 | Environmental | Open in IMG/M |
3300031943 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2 | Environmental | Open in IMG/M |
3300032000 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3 | Environmental | Open in IMG/M |
3300032075 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3 | Environmental | Open in IMG/M |
3300032144 | Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil | Environmental | Open in IMG/M |
3300032157 | Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil | Environmental | Open in IMG/M |
3300032179 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2 | Environmental | Open in IMG/M |
3300032211 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1 | Environmental | Open in IMG/M |
3300033412 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC | Environmental | Open in IMG/M |
3300033551 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5 | Environmental | Open in IMG/M |
3300034147 | Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
Iowa-Corn-GraphCirc_02911240 | 2140918013 | Soil | MKTPQADGSSAPLNSTEKPAVPKKKRQTGKLDRGDAHIGATEDQVSDTQAPSGEGYKDEPKQG |
ICChiseqgaiiDRAFT_08251964 | 3300000033 | Soil | MKTPQADGSSEPLNKVEKPRLPRKVEKPRLPRKKEPSPPAELGDQHIGATEDQVSDTQAPAGEXYKDEPXQG* |
ICChiseqgaiiDRAFT_08254193 | 3300000033 | Soil | MRGRRMKTPQADGSSAPLNSTEKPAVPKKKRQTGKLDRGDAHIGATEDQVSDTQAPSGEGYKDEP |
JGI11643J12802_112610003 | 3300000890 | Soil | APLNSTEKPAVPKKKRQTGKLDRGDAHIGATEDQVSDTQAPSGEGYKDEPKQG* |
JGI10216J12902_1027241241 | 3300000956 | Soil | MKTPQADGSSAPLNSTEKPAVPLKKRRTGKVDRGDAHLGATEDQVSDTQAPTGEAYKDEPKQG* |
Ga0062593_1018007231 | 3300004114 | Soil | MRGRRMKTPQADGSSAPLNSTEKPAVPKKKRQTGKLDRGDAHIGATEDQVSDTQAPSGEGYKDEPKQG* |
Ga0062590_1003941681 | 3300004157 | Soil | MKTPQADGSSEPLNKVEKPRLPRKVEKPRLPRKKEPSPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPRQG*ADGLPSEARD |
Ga0063356_1004663613 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MKTPQADGSSEPLNATETPPLPRKKSHLPRKKGPSAPADLGDKHIGATEDQVSDTQAPAGEEYKDEP |
Ga0063356_1024964681 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MKTPQADGSSEPLNRAEKPRRTSKKEASITPDSGDAHIGATEDQVSDTQAPAGEAYKDEPRQG* |
Ga0063356_1027859322 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MKTPQADGSSAPLNATEKPPAPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG* |
Ga0062592_1024642831 | 3300004480 | Soil | MKTPQADGSSAPLNVTETPAPPKKTPAPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQ |
Ga0062591_1008806102 | 3300004643 | Soil | MKTPQADGSSAPLNSTEKPAVPKKKRQTGKLDRGDAHIGATEDQVSDTQAPSGEGYKDEPKQG* |
Ga0062591_1009164641 | 3300004643 | Soil | MKTPQADGSSAPLNVTETPAPPKKTPAPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG* |
Ga0065715_100300435 | 3300005293 | Miscanthus Rhizosphere | MKTPQADGSSAPLNVTEVTSSSEENTSASEERRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG* |
Ga0065705_103808333 | 3300005294 | Switchgrass Rhizosphere | MKTPQADGSSAPLNVTETPAPPKKTPAPPKRRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEP |
Ga0070676_100038655 | 3300005328 | Miscanthus Rhizosphere | MKTPQADGSSEPLNKVEKPRLPRKKEPSPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPRQG* |
Ga0070676_103113793 | 3300005328 | Miscanthus Rhizosphere | MKTPQADGSSAPLNATEKPRPPVKKRPLRAVDRSDGHLGATEDQVSDTQAPAGEAYKDEPKQG* |
Ga0070677_101725111 | 3300005333 | Miscanthus Rhizosphere | MKTPQADGSSAPLNSTEKPPAPPKKRRGEKLDRGDAHIGATEEQMSDTQAPAGEAYKDEPKQG* |
Ga0070677_104626741 | 3300005333 | Miscanthus Rhizosphere | SPCSPHSEVRMKSPQADGSSEPLNKVVEPDSLAKKRRPKPVDAGDGHLGATEDQVSDTQAPTGEAYKDEPKQG* |
Ga0070668_1000109565 | 3300005347 | Switchgrass Rhizosphere | MKTPQADGSSEPLNATEKPRLPRKKQPAPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPRQG* |
Ga0070673_1003070331 | 3300005364 | Switchgrass Rhizosphere | MKTPQADGSSEPLNKVEKPRLPRKKEPSPPAELDDQHIGATEDQVSDTQAPAGEEYKDEPRQG* |
Ga0070667_1000137112 | 3300005367 | Switchgrass Rhizosphere | MKTPQADGSSEPLNKVEKPRLPRKVEKPRLPRKKEPSPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPRQG* |
Ga0070663_1005478331 | 3300005455 | Corn Rhizosphere | PQADGSSEPLNKVEKPRLPRKVEKPRLPRKKEPSPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPRQG* |
Ga0068867_1005441631 | 3300005459 | Miscanthus Rhizosphere | VMKTPQADGSSAPLNATEKPRPPVKKRPLRAVDRSDGHLGATEDQVSDTQAPAGEAYKDEPKQG* |
Ga0068867_1009584353 | 3300005459 | Miscanthus Rhizosphere | MKTPQADGSSEPLNATETPPLPRKKSHLPRKKGPSAPADLGDKHIGATEDQVSDT |
Ga0070685_101795332 | 3300005466 | Switchgrass Rhizosphere | MKTPQADGSSAPLNVTESPAPPKKTPAPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG* |
Ga0070684_1014533992 | 3300005535 | Corn Rhizosphere | MKTPQADGSSEPLNKVEKPRLPRKKEPSPPAELGDQHIGATEDQVSDTQAPAGEEYK |
Ga0070672_1000066296 | 3300005543 | Miscanthus Rhizosphere | MKTPQADGSSAPLNVTETPAPPKKTPAPPKRRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG* |
Ga0070672_1005194873 | 3300005543 | Miscanthus Rhizosphere | MKTPQADGSSEPLNATEKPRLPRKKQPAPPAELGDQHIGATEDQVSDTQAP |
Ga0068852_1001897253 | 3300005616 | Corn Rhizosphere | MKTPQADGSSEPLNATEKPRPPRKKQPAPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPRQG* |
Ga0068862_1012847452 | 3300005844 | Switchgrass Rhizosphere | MKTPQADGSSAPLNATEKPAVPLKKRRTGKVDRGDAHLGATEDQMSDTQAPTGEGYKDEPKQG* |
Ga0075422_105633361 | 3300006196 | Populus Rhizosphere | MKTPQADGSSEPLNATETPPLPRKKSHLPRKKGPSAPADLGDKHIGATEDQVSDTQ |
Ga0075428_1002813945 | 3300006844 | Populus Rhizosphere | MDLNLLSHDLRCLMKTPQADGSSEPLNRTEKPQRPLKKRPAPPADLGDKHIGATEDQVSDTQAP |
Ga0075428_1009825202 | 3300006844 | Populus Rhizosphere | MKTPQADGSSEPLNGTETPRLPRDVSRLPRKKAPSPPADLGDKHIGATEDQVSDTQAPAGEDYKDEPRQG* |
Ga0075421_1000011205 | 3300006845 | Populus Rhizosphere | MKTPQADGSSEPLNATEKPRPPRKIRSSPPAELGDQHIGATEDQVSDTQAPAGEEYNDEPKQG* |
Ga0075421_1001135726 | 3300006845 | Populus Rhizosphere | PQADGSSEPLNETEKPRPPLKKKHEYPDDLGDKHIGATEDQVSDTQAPAGEEYKDEPKQG |
Ga0075421_1002392694 | 3300006845 | Populus Rhizosphere | MKTPQADGSSEPLNGTETPRLPRDVSRLPRKKAPSPPADLGDEHIGATEDQVSDTQAPAGEDYKDEPRQG* |
Ga0075430_1001593722 | 3300006846 | Populus Rhizosphere | MKTPQADGSSEPLNETEKPRPPLKKKHEYPDDLGDKHIGATEDQVSDTQAPAGEEYKDEPKQG* |
Ga0111539_102308172 | 3300009094 | Populus Rhizosphere | MKTPQADGSSEPLNQAEKPRPTSKKEASITPDSGDAHIGATEDQVSDTQAPAGEAYKDEPKQG* |
Ga0111538_100611544 | 3300009156 | Populus Rhizosphere | MKTPQADGSSEPLNATETPPLPRKKSHLPRKKGPSAPADLGDKHIGATEDQVSDTQAPAGEEYKDEPRQG* |
Ga0111538_132506281 | 3300009156 | Populus Rhizosphere | MKTPQADGSSAPLNATEKRPARPKKRRGEKVDRGDAHIGATEDQVSDTQAPAGEAYKDEPKQG* |
Ga0105248_119148022 | 3300009177 | Switchgrass Rhizosphere | MKTPQADGSSEPLNATEKPRPPLKKRKTGSAGRADKGDKHIGATEDQVSDTQAPAGEDYKDEPRQG* |
Ga0105249_1000891911 | 3300009553 | Switchgrass Rhizosphere | ADGSSEPLNAAEKPRPPRKKQPSPPADLGDQHIGATEDQVSDTQAPAGEEYKDEPRQG* |
Ga0105249_111275391 | 3300009553 | Switchgrass Rhizosphere | MKTPQADGSSAPLNATEKPPAPPKKRRGEKLDRGDAHIGATEEQMSDTQAPAGEAYKDEPKQG* |
Ga0126377_107149112 | 3300010362 | Tropical Forest Soil | MKTPQADGSSEPLHTTEKPRPPREKRSAPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPKQG* |
Ga0105246_106238061 | 3300011119 | Miscanthus Rhizosphere | MKTPQADGSSAPLNVTETPAPPKKTPAPPKRRRGEKLDRGDAHIGATEDQVSDTQAPAGEAYKDEPKQG* |
Ga0126317_103299673 | 3300011332 | Soil | KTPQADGSSAPLNAAEKPPARPKKRRGEKVDRGDAHIGATEDQVSDTQAPAGEAYKDEPKQG* |
Ga0137432_13096131 | 3300011439 | Soil | REVARMKTRQADGSSAPLNVTETPAPPKKTPAPPKKRRGQKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG* |
Ga0157330_10287083 | 3300012514 | Soil | ANQWTSTCCGPREVVMKTPQADGSSEPLNATEKPRPPRKKQPAPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPRQG* |
Ga0157298_101037703 | 3300012913 | Soil | MKTPQADGSSEPLNKVEKPRLPRKKEPSPPAELGDKHIGATEDQVSDTQAPAGEEYKDEPRQG* |
Ga0157378_115346731 | 3300013297 | Miscanthus Rhizosphere | MAGDQIAIAEQEVGRMKTPQADGSSAPLNSTEKPPAPPKKRRGEKLDRGDAHIGATEEQMSDTQAPAGEAYKDEPKQG* |
Ga0157375_136235182 | 3300013308 | Miscanthus Rhizosphere | QPIAWTSTCSDPREVVMKTPQADGSSEPLNKVEKPRLPRKKEPSPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPRQG* |
Ga0157380_107940151 | 3300014326 | Switchgrass Rhizosphere | AIAEQEVGRMKTPQADGSSAPLNSTEKPPAPPKKRRGEKLDRGDAHIGATEEQMSDTQAPAGEAYKDEPKQG* |
Ga0157380_132906812 | 3300014326 | Switchgrass Rhizosphere | MGGDQIAIADREVERMKTPQADGSSAPLNATEKPRVPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYK |
Ga0132258_100723488 | 3300015371 | Arabidopsis Rhizosphere | MKTPQAAGSSEPLNQAEKPRPTSKKEASITPDSGDAHIGATEDQVSDTQAPAGEAYKDEPKQG* |
Ga0132258_112369914 | 3300015371 | Arabidopsis Rhizosphere | MKTPQADGSSEPLNATEKPRPPLKKRPGGSADRADKGDKHIGATEDQVSDTQALAGEEYKDEPRQG* |
Ga0132256_1028454842 | 3300015372 | Arabidopsis Rhizosphere | MKTPQADGSSEPLNKVEKPRLPRKVEKPRLPRKKEPSPPAELGDQHIGATEDQVSDTQAPAGEEYKD |
Ga0132255_1016936433 | 3300015374 | Arabidopsis Rhizosphere | MKTPQADGSSEPLNATEKPRPPLKKRPGGSADRADKGDKHIGATEDQVSDTQAPAGEDYK |
Ga0184611_11253393 | 3300018067 | Groundwater Sediment | MKTPQADGSSAPLNVTETPAPPKKTPAPPKRRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG |
Ga0184628_107100611 | 3300018083 | Groundwater Sediment | MKTPQADGSSAPLDVTETPAPPKKTPAPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG |
Ga0190268_103893692 | 3300018466 | Soil | MKTPQADGSSEPLNKVEQPQLPPRPPRKKQRSDEEAGEAGDAHLGATEDQVSDTSAPAGEAYKDEPKQG |
Ga0190270_106447193 | 3300018469 | Soil | MKTPQADGSSAPLNATEKPRVPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG |
Ga0190271_118846601 | 3300018481 | Soil | MKTPQADGSSEPLNKTETPQPPLKKRPPYSSDRGDKHIGATEDQMSDTQAPAGEEYKDEPKQG |
Ga0184647_13728253 | 3300019263 | Groundwater Sediment | KTPQADGSSAPLNAAEKPAVPLKKRRTGKVDRGDAHLGATEDQMSDTQAPTGEAYKDEPKQG |
Ga0173482_100153553 | 3300019361 | Soil | MKTPQADGSSAPLNVTESPAPPKKTPAPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG |
Ga0210380_101050163 | 3300021082 | Groundwater Sediment | MKTPQADGSSAPLNVTETPAPPKKTPAPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG |
Ga0207697_100007395 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | MKTPQADGSSEPLNKVEKPRLPRKVEKPRLPRKKEPSPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPRQG |
Ga0207697_101115133 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | MKTPQADGSSAPLNSTEKPPAPPKKRRGEKLDRGDAHIGATEEQMSDTQAPAGEAYKDEPKQG |
Ga0207682_106193332 | 3300025893 | Miscanthus Rhizosphere | KSPQADGSSEPLNKVVEPDSLAKKRRPKPVDAGDGHLGATEDQVSDTQAPTGEAYKDEPKQG |
Ga0207688_100686975 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | MKTPQADGSSEPLNKVEKPRLPRKKEPSPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPRQG |
Ga0207688_102130243 | 3300025901 | Corn, Switchgrass And Miscanthus Rhizosphere | MKTPQADGSSAPLNVTETPAPPKKTPAPPKKRRGEKLDRGDAHIGATEEQMSDTQAPAGEAYKD |
Ga0207643_100795044 | 3300025908 | Miscanthus Rhizosphere | MKTPQADGSSEPLNKVEKPRLPRKKEPSPPAELDDQHIGATEDQVSDTQAPAGEEYKDEPRQG |
Ga0207701_109509361 | 3300025930 | Corn, Switchgrass And Miscanthus Rhizosphere | MKTPQADGSSEPLNATETPPLPRKKSHLPRKKGPSAPADLGDKHIGATEDQVSDTQAPAGEEYKDEPRQG |
Ga0207644_110250321 | 3300025931 | Switchgrass Rhizosphere | MKTPQADGSSEPLNKVEKPRLPRKVEKPRLPRKKEPSPPAELGDQHIGATEDQVSDTQA |
Ga0207669_100148945 | 3300025937 | Miscanthus Rhizosphere | MKTPQADGSSAPLNATEKPRPPVKKRPLRAVDRSDGHLGATEDQVSDTQAPAGEAYKDEPKQG |
Ga0207669_108232102 | 3300025937 | Miscanthus Rhizosphere | MKTPQADGSSAPLNATEKPRVPPKKRRGEKLDRGDAHIGATEDQVSDTQAPTGEAYKDEPKQG |
Ga0207669_110464942 | 3300025937 | Miscanthus Rhizosphere | AIADREVARMKTPQADGSSAPLNVTESPAPPKKTPAPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG |
Ga0207711_117478522 | 3300025941 | Switchgrass Rhizosphere | MKTPQADGSSEPLNKVEKPRLPRKKEPSPPAELGDQHIGATEDQVSDTQAPAGEEYKD |
Ga0207689_1000164318 | 3300025942 | Miscanthus Rhizosphere | MKTPQADGSSEPLNATEKPRLPRKKQPAPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPRQG |
Ga0207689_112213031 | 3300025942 | Miscanthus Rhizosphere | MKTPQADGSSAPLNVTETPAPPKKTPDPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAY |
Ga0207703_115978441 | 3300026035 | Switchgrass Rhizosphere | MKTPQADGSSEPLNKVEKPRLPRKVEKPRLPRKKEPSPPAELGDQHIGATEDQVSDTQAPAGEEYK |
Ga0207678_104674123 | 3300026067 | Corn Rhizosphere | PQADGSSEPLNKVEKPRLPRKVEKPRLPRKKEPSPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPRQG |
Ga0207708_113775502 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | MKTPQADGSSAPLSATEKPAVPLKKRRTGKVDRGDAHLGATEDQMSDTQAPTGEGYKDEPKQG |
Ga0207648_102751223 | 3300026089 | Miscanthus Rhizosphere | MKTPQADGSSAPLNATEKPPAPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG |
Ga0207676_107861081 | 3300026095 | Switchgrass Rhizosphere | MKTPQADGSSAPLNVTETPAPPKKTPDPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG |
Ga0207676_114075763 | 3300026095 | Switchgrass Rhizosphere | MKTPQADGSSEPLNKVEKPRLPRKVEKPRLPRKKEPSPPAELGDQHIGATEDQVSDTQAPAGEEY |
Ga0207675_1003180002 | 3300026118 | Switchgrass Rhizosphere | MKTPQADGSSAPLNSTEKPPAPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG |
Ga0209481_100301895 | 3300027880 | Populus Rhizosphere | MKTPQADGSSEPLNATEKPRPPRKIRSSPPAELGDQHIGATEDQVSDTQAPAGEEYNDEPKQG |
Ga0209481_103872032 | 3300027880 | Populus Rhizosphere | MKTPQADGSSEPLNATEKPRPPRKKQPAPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPRQG |
Ga0209382_102905014 | 3300027909 | Populus Rhizosphere | MKTPQADGSSEPLNGTETPRLPRDVSRLPRKKAPSPPADLGDEHIGATEDQVSDTQAPAGEDYKDEPRQG |
Ga0247822_106352562 | 3300028592 | Soil | MKTPQADGSSAPLNATEKPPAPPKKRRGEKLDRGDAHIGATEDQVSDTQAPASEAYKDEPKQG |
Ga0247825_101362242 | 3300028812 | Soil | MKTPQADGSSAPLNVTETPAPPKKTPAPPKKRRGQKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG |
Ga0247825_101661223 | 3300028812 | Soil | LLWLIERSRMKTPQADGSSAPLNVTETPAPPKKTPAPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG |
Ga0310888_100972513 | 3300031538 | Soil | MKTPQADGSSAPLNATEKPPAPPKKRRGQKVDRGDAHIGATEDQMSDTQAPAGEAYKDEPKQG |
Ga0310900_105578963 | 3300031908 | Soil | MKTPQADGSSAPLNSTEKPAVPKKKRQTGKLDRGDAHIGATEDQVSDTQAPSGEGY |
Ga0310901_100132525 | 3300031940 | Soil | SAPLNSTEKPAVPKKKRQTGKLDRGDAHIGATEDQVSDTQAPSGEGYKDEPKQG |
Ga0310885_101138723 | 3300031943 | Soil | MKTPQADGSSAPLNVTETPAPPKKTPAPPKKRRGEKLDRGDAHIGATEDQVSDTQAPAGEAYKDEPKQG |
Ga0310903_107504081 | 3300032000 | Soil | GSSAPLNATEKPPAPPKKRRGEKVDRGDAHIGATEDQMSDTQAPAGEAYKDEPKQG |
Ga0310890_101106463 | 3300032075 | Soil | MKTPQADGSSAPLNATEKPPAPPKKRRREKLDRGDAHIGATEDQVSDTQAPAGEAYKDEPKQG |
Ga0310890_104600041 | 3300032075 | Soil | QIAIADREVARMKTPQADGSSAPLNVTETPAPPKKTPAPPKRRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG |
Ga0315910_100798296 | 3300032144 | Soil | MKTPQADGSSAPLNSTEKPAVPLKKRRPAKVDRGDAHLGATEDQVSDTQAPAGEAYKDEPKQG |
Ga0315910_102033402 | 3300032144 | Soil | MKTPQADGSSEPLNKAEKPCPPPKKKPGYPADLGDKHIGATEDQVSDTQAPAGEEFKDEPKQG |
Ga0315910_103407491 | 3300032144 | Soil | SEPLNNTEKPRPPLKKKPAYPADLGDKHIGATEDQVSDTQAPAGEEYNDEPKQG |
Ga0315912_1000196614 | 3300032157 | Soil | MKTPQADGSSAPLNETEKPRIPLKKRRDEKLDRSDAHIGATEDQVSDTQAPAGEAYKDEPKQG |
Ga0315912_106288323 | 3300032157 | Soil | MKTPQADGSSEPLNTTEKPRPPVKKRPARALDRSDGHLGATEDQVSDTQAPAGE |
Ga0310889_101872893 | 3300032179 | Soil | PREVVMKTPQADGSSEPLNATEKPRPPRKKQPAPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPRQG |
Ga0310896_103396201 | 3300032211 | Soil | QADGSSAPLNVTETPAPPKKTPAPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG |
Ga0310810_100849193 | 3300033412 | Soil | MKTPQADGSSEPLNATEKPRPPLKKRKTGSTDRADKGDKHIGATEDQVSDTQAPAGEDYKDEPRQG |
Ga0247830_115838081 | 3300033551 | Soil | PLNATEKPRLPRKKQPAPPAELGDQHIGATEDQVSDTQAPAGEEYKDEPRQG |
Ga0364925_0097412_202_438 | 3300034147 | Sediment | MGGDQIAIADREVERMKTPQADGSSAPLNATEKPRVPPKKRRGEKLDRGDAHIGATEDQMSDTQAPTGEAYKDEPKQG |
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