Metagenome Family F087364

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087364
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	65 residues
Representative Sequence	MTVPRNFLWTPEEDDELRSSILASKDIATIAKELNRTQTAIRRRAAKLKLPLKVVSVELKAKGK
Number of Associated Samples	83
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.72 %
% of genes near scaffold ends (potentially truncated)	47.27 %
% of genes from short scaffolds (< 2000 bps)	90.00 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.364 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.727 % of family members)
Environment Ontology (ENVO)	Unclassified (63.636 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (77.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.39% β-sheet: 0.00% Coil/Unstructured: 57.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF13921	Myb_DNA-bind_6	31.82
PF04892	VanZ	2.73
PF04392	ABC_sub_bind	1.82
PF07508	Recombinase	1.82
PF13545	HTH_Crp_2	0.91
PF00589	Phage_integrase	0.91
PF13505	OMP_b-brl	0.91
PF04226	Transgly_assoc	0.91
PF00196	GerE	0.91
PF11295	DUF3096	0.91
PF00872	Transposase_mut	0.91
PF02775	TPP_enzyme_C	0.91
PF13358	DDE_3	0.91
PF11742	DUF3302	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.82
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.82
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.91
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.36 %
Unclassified	root	N/A	13.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.36 %
Unclassified	root	N/A	13.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.36 %
Unclassified	root	N/A	13.64 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	86.36 %
Unclassified	root	N/A	13.64 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	81.82 %
Unclassified	root	N/A	13.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	67.27 %
Unclassified	root	N/A	13.64 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.91 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	62.73 %
Unclassified	root	N/A	13.64 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	0.91 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	59.09 %
Unclassified	root	N/A	13.64 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.64 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	7.27 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.82 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.91 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.64 %
Bradyrhizobium sp. sBnM-33	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	1.82 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1.82 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1.82 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1.82 %
Bradyrhizobium sp. WSM1417	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1417	0.91 %
Bradyrhizobium sp. SRL28	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	0.91 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.91 %
Betaproteobacteria bacterium SG8_40	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|FZY7DQ102JFSAY	Not Available	511	Open in IMG/M
3300000789\|JGI1027J11758_13045422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	625	Open in IMG/M
3300000858\|JGI10213J12805_10744589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1134	Open in IMG/M
3300000955\|JGI1027J12803_109546295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	796	Open in IMG/M
3300002077\|JGI24744J21845_10083435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300005165\|Ga0066869_10058699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	695	Open in IMG/M
3300005328\|Ga0070676_10258853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1164	Open in IMG/M
3300005335\|Ga0070666_10101753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1981	Open in IMG/M
3300005337\|Ga0070682_101286688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	621	Open in IMG/M
3300005338\|Ga0068868_101108060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	729	Open in IMG/M
3300005339\|Ga0070660_100524461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	987	Open in IMG/M
3300005345\|Ga0070692_11119287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	557	Open in IMG/M
3300005347\|Ga0070668_100478573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1075	Open in IMG/M
3300005347\|Ga0070668_100552411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1002	Open in IMG/M
3300005347\|Ga0070668_100632984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	938	Open in IMG/M
3300005355\|Ga0070671_100393242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1185	Open in IMG/M
3300005367\|Ga0070667_100819011	All Organisms → cellular organisms → Bacteria → Proteobacteria	865	Open in IMG/M
3300005367\|Ga0070667_101127408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	733	Open in IMG/M
3300005455\|Ga0070663_101540210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	592	Open in IMG/M
3300005459\|Ga0068867_100114028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2080	Open in IMG/M
3300005459\|Ga0068867_102055882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	541	Open in IMG/M
3300005539\|Ga0068853_101522766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300005546\|Ga0070696_101093283	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300005549\|Ga0070704_101335050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	657	Open in IMG/M
3300005578\|Ga0068854_101259175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	664	Open in IMG/M
3300005615\|Ga0070702_100150365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1494	Open in IMG/M
3300005718\|Ga0068866_10759043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	671	Open in IMG/M
3300005719\|Ga0068861_101651118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	632	Open in IMG/M
3300005719\|Ga0068861_102126261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300005841\|Ga0068863_101221549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	758	Open in IMG/M
3300005843\|Ga0068860_100741356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	993	Open in IMG/M
3300005843\|Ga0068860_102769237	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300005844\|Ga0068862_100218576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1724	Open in IMG/M
3300005844\|Ga0068862_100455590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1207	Open in IMG/M
3300005844\|Ga0068862_101392235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1417	704	Open in IMG/M
3300006237\|Ga0097621_100347624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1318	Open in IMG/M
3300006237\|Ga0097621_101316145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	683	Open in IMG/M
3300006881\|Ga0068865_100745672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	841	Open in IMG/M
3300009094\|Ga0111539_12926779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300009162\|Ga0075423_11995143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	628	Open in IMG/M
3300009176\|Ga0105242_11165016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	788	Open in IMG/M
3300009545\|Ga0105237_10452453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1290	Open in IMG/M
3300009551\|Ga0105238_11355604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300009553\|Ga0105249_11390319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	774	Open in IMG/M
3300010329\|Ga0134111_10544459	Not Available	514	Open in IMG/M
3300010375\|Ga0105239_10197106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2255	Open in IMG/M
3300010397\|Ga0134124_11945232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300010401\|Ga0134121_10092822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium SG8_40	2524	Open in IMG/M
3300012902\|Ga0157291_10328623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	541	Open in IMG/M
3300012951\|Ga0164300_10916174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	556	Open in IMG/M
3300012958\|Ga0164299_10430240	Not Available	857	Open in IMG/M
3300012958\|Ga0164299_10770177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300012958\|Ga0164299_11075264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	599	Open in IMG/M
3300012961\|Ga0164302_10370263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	965	Open in IMG/M
3300012961\|Ga0164302_10568847	Not Available	815	Open in IMG/M
3300012961\|Ga0164302_11496033	Not Available	556	Open in IMG/M
3300012988\|Ga0164306_11078277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	666	Open in IMG/M
3300012989\|Ga0164305_10736519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	810	Open in IMG/M
3300013306\|Ga0163162_10454452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1413	Open in IMG/M
3300013306\|Ga0163162_11625966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	737	Open in IMG/M
3300013306\|Ga0163162_12109957	Not Available	646	Open in IMG/M
3300013306\|Ga0163162_12184710	Not Available	635	Open in IMG/M
3300014326\|Ga0157380_11319829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	769	Open in IMG/M
3300014326\|Ga0157380_13100153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300014745\|Ga0157377_10029193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2975	Open in IMG/M
3300015371\|Ga0132258_10411527	All Organisms → cellular organisms → Bacteria → Proteobacteria	3362	Open in IMG/M
3300015371\|Ga0132258_13454834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1083	Open in IMG/M
3300015372\|Ga0132256_100514397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	1308	Open in IMG/M
3300015372\|Ga0132256_102337990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	638	Open in IMG/M
3300015374\|Ga0132255_102348494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	814	Open in IMG/M
3300015374\|Ga0132255_106130740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	509	Open in IMG/M
3300017792\|Ga0163161_10493215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	996	Open in IMG/M
3300017792\|Ga0163161_10849835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	770	Open in IMG/M
3300017792\|Ga0163161_11223865	Not Available	650	Open in IMG/M
3300018469\|Ga0190270_13429625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	503	Open in IMG/M
3300018481\|Ga0190271_10027136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4548	Open in IMG/M
3300019377\|Ga0190264_10127733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1260	Open in IMG/M
3300025315\|Ga0207697_10371260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300025899\|Ga0207642_10197566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1108	Open in IMG/M
3300025899\|Ga0207642_10229528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1042	Open in IMG/M
3300025901\|Ga0207688_10587651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	701	Open in IMG/M
3300025903\|Ga0207680_10080379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2047	Open in IMG/M
3300025903\|Ga0207680_10835700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	660	Open in IMG/M
3300025907\|Ga0207645_10047706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2735	Open in IMG/M
3300025908\|Ga0207643_10071995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1990	Open in IMG/M
3300025924\|Ga0207694_11305488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	614	Open in IMG/M
3300025930\|Ga0207701_10780902	Not Available	805	Open in IMG/M
3300025932\|Ga0207690_10467787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1016	Open in IMG/M
3300025933\|Ga0207706_10144322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2094	Open in IMG/M
3300025933\|Ga0207706_11521435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	545	Open in IMG/M
3300025934\|Ga0207686_10430635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1011	Open in IMG/M
3300025937\|Ga0207669_10064391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2268	Open in IMG/M
3300025937\|Ga0207669_11655165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	546	Open in IMG/M
3300025972\|Ga0207668_10462581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1085	Open in IMG/M
3300026035\|Ga0207703_12395690	Not Available	503	Open in IMG/M
3300026088\|Ga0207641_11082841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	800	Open in IMG/M
3300026089\|Ga0207648_11204393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	711	Open in IMG/M
3300026121\|Ga0207683_11506901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	621	Open in IMG/M
3300026142\|Ga0207698_12278696	Not Available	554	Open in IMG/M
3300027310\|Ga0207983_1024045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	746	Open in IMG/M
3300027907\|Ga0207428_11198561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	528	Open in IMG/M
3300028380\|Ga0268265_11778968	Not Available	622	Open in IMG/M
3300028381\|Ga0268264_12034455	Not Available	583	Open in IMG/M
3300031170\|Ga0307498_10055987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1086	Open in IMG/M
3300031740\|Ga0307468_100282158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1192	Open in IMG/M
3300031740\|Ga0307468_100561622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	922	Open in IMG/M
3300032012\|Ga0310902_11313037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300032075\|Ga0310890_11542821	Not Available	548	Open in IMG/M
3300032205\|Ga0307472_101858890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	600	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	69.09%
Environmental	Environmental	30.91%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	69.09%
Terrestrial	Environmental → Terrestrial	30.91%

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	35.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.82%
Soil	Environmental → Terrestrial → Soil	30.91%
Roots	Host-Associated → Plants → Roots	1.82%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	30.91%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.82%
Loam	Environmental → Terrestrial → Soil → Loam	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.64%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.82%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	30.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	20.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.82%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	10.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	9.09%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	8.18%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.91%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_04957920	2170459002	Grass Soil	MVPRNPLWTPEEDDKLRSLILSSKDIATIAKQLKRTQRAIRGRASKLKLPYKVVAVGLKVKPK
JGI1027J11758_130454221	3300000789	Soil	AXRAXAEVEGQMTVPRNPLWTPEEDGKRRSLIQSSEDIATIATQLNRSEKAVRNRAWKLRLPLKVVAVGLGAKTK*
JGI10213J12805_107445891	3300000858	Soil	SRGRLRGRRLRKPKPPPGKGEMTVPRNFLWTPEEDDELRSSILASKDIATIAKQLNRTQTAIRRRAAKLKLPLKVVAVGLKAMPAK*
JGI1027J12803_1095462953	3300000955	Soil	PEEDDELRSSILASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVTVGKAKGK*
JGI24744J21845_100834351	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	PKAKDEMMLPLNPLWTPEEDDELPSSILASKDIATIAQELNRTQKAIRRRASKLKLPLKVVELGLKAKAK*
Ga0066869_100586991	3300005165	Soil	AKGEMMVPRNPLWTPEEDDKLRSLILSSKDVATIAKQLNRTRRAIRCRAAKLKLPWKVVAVGLKAKGK*
Ga0070676_102588533	3300005328	Miscanthus Rhizosphere	MTVPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVTVGKAKGK*
Ga0070677_103546503	3300005333	Miscanthus Rhizosphere	DDELRSSILASKDIATIAKELNRTQKAIRRRATKLKLPLKVVTVRLKGKAK*
Ga0070666_101017536	3300005335	Switchgrass Rhizosphere	TPEEDDELRSLILASKDIATIAKELNRTQKAIRRRATKLKLPLKVVTVRLKGKAK*
Ga0070682_1012866881	3300005337	Corn Rhizosphere	EEDDELPSSILASKDIATIAQELNRTQKAIRRRASKLKLPLKVVELGLKAKAK*
Ga0068868_1011080603	3300005338	Miscanthus Rhizosphere	LWTPEEDDELRSSILASKDIATIAKELNRTQTAIRRRAAKLKLPLKVVSVELKAKGK*
Ga0070660_1005244611	3300005339	Corn Rhizosphere	MRVPRNFLWTPEEDDELRSSILASKDIATIAKQLNRTQTAIRRRAAKLKLPLKVVAVGLKAMPAK*
Ga0070692_111192871	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MVPRNILWTPEEDDELRSSMLASKDIATIAKKLNRTQTAIRRRATKLKLPLKVITVGKAKGK*
Ga0070668_1004785732	3300005347	Switchgrass Rhizosphere	MTVPRNPLWTPEEDGKLRSLILSSEDIATIATQLNRSEKAVRNRAWKLRLPLKVVDAGLGAKTK*
Ga0070668_1005524111	3300005347	Switchgrass Rhizosphere	EMTVPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVTVGKAKGK*
Ga0070668_1006329841	3300005347	Switchgrass Rhizosphere	EGEMTVPRNFLWTPEEDDELRSSILASKDIATIAKELNRTQTAIRRRAAKLKLPLKVVSVELKAKGK*
Ga0070671_1003932422	3300005355	Switchgrass Rhizosphere	MTVPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRAAKMKLPLKVVAIELGLKAKK*
Ga0070667_1008190111	3300005367	Switchgrass Rhizosphere	EMTVPRNFLWTPEEDDELRSSILASKDIATIAKELNRTQKAIRRRATKLKLPLKVVTVRLKGKAK*
Ga0070667_1011274081	3300005367	Switchgrass Rhizosphere	MTVPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVTV
Ga0070663_1015402103	3300005455	Corn Rhizosphere	PEEDDELRSSILASKDIAIIAKELNRTQTAIRRRAAKLKLPLKVVSVELKAKGK*
Ga0068867_1001140282	3300005459	Miscanthus Rhizosphere	MTVPPNPLWTPEEDDELPSSILASKDIATIAQELNRTQKAIRRRASKLKLPLKVVELGLKAKAK*
Ga0068867_1020558821	3300005459	Miscanthus Rhizosphere	MRVPRNFLWTPEEDDELRSSILASKDIATIAKELNRTQTAIRRRAAKLKLPLKVVSVELKAKGK*
Ga0068853_1015227661	3300005539	Corn Rhizosphere	MTVPRNFLWTPEEDDELRSSILASKDIATIAKQLNRTQTAIRRRAAKLKLPLKVVALGLKAKQK*
Ga0070696_1010932831	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MMLPPNPLWTPEEDDELPSSILASKDIATIAQELNRTQKAIRRRASKLKLPLKVVE
Ga0070704_1013350501	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ACRAAEGEMTVPRNFLWTPEEDDELRSSILASKDIATIAKELNRTQTAIRRRATKLKLPLKVVTVGKAKGK*
Ga0068854_1012591752	3300005578	Corn Rhizosphere	MTVPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVAVGLKAKPAK*
Ga0070702_1001503651	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MTVPRNFLWTPEEDDELRSSILASKDIATIAKELNRTQTAIRRRAAKLKLPLKVVSVELKAKGK*
Ga0068866_107590432	3300005718	Miscanthus Rhizosphere	MRVPRNFLWTPEEDDELRSSILASKDIAIIAKELNRTQTAIRRRAAKLKLPLKVVSVELKAKGK*
Ga0068861_1016511182	3300005719	Switchgrass Rhizosphere	MVPRNILWTPEEDDELRSSMLASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVAVGLKAKPAK*
Ga0068861_1021262611	3300005719	Switchgrass Rhizosphere	MTVPRNFLWTPEEDDELRSSILASKDIATIAKQLNRTQTAIRRRAAKLKLPLKVVAVGLKAMPAK*
Ga0068863_1012215492	3300005841	Switchgrass Rhizosphere	VPRNFLWTPEEDDELRSSILASKDIAIIAKELNRTQTAIRRRAAKLKLPLKVVSVELKAKGK*
Ga0068860_1007413562	3300005843	Switchgrass Rhizosphere	GKGEMTVPRNFLWTPEEDDELRSSILASKDIATIAKQLNRTQTAIRRRAAKLKLPLKVVAVGLKAKPAK*
Ga0068860_1027692371	3300005843	Switchgrass Rhizosphere	LWTPEEDDELRSSILASKDIATIAKELNRTQKAIRRRATKLKLPLKVVTVRLKGKAK*
Ga0068862_1002185765	3300005844	Switchgrass Rhizosphere	AEGEMTVPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVTVGKAKGK*
Ga0068862_1004555902	3300005844	Switchgrass Rhizosphere	GEMTVPRNFLWTPEEDDELRSSILASKDIATIAKQLNRTQTAIRRRAAKLKLPLKVVAVGLKAMPAK*
Ga0068862_1013922351	3300005844	Switchgrass Rhizosphere	MTVPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRAVKMKLPLKVVAIELGLKAKK*
Ga0097621_1003476241	3300006237	Miscanthus Rhizosphere	SHPPACRAAEGEMTVPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVAVGLKAKPAK*
Ga0097621_1013161451	3300006237	Miscanthus Rhizosphere	LWTPEEDDELRSSILASKDIAIIAKELNRTQTAIRRRAAKLKLPLKVVSVELKAKGK*
Ga0068865_1007456723	3300006881	Miscanthus Rhizosphere	VPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVTVGKAKGK*
Ga0111539_129267792	3300009094	Populus Rhizosphere	MFPPNPLWTPEEDAELRSSILASKDIATIAKELNRTQKAIRRRATKLKLPLKVF
Ga0075423_119951432	3300009162	Populus Rhizosphere	MTVPRNILWTPEEDDELRLSILASKDIATIAEELNRTKTAIRRRAEVVVVGLKAKGK*
Ga0105242_111650162	3300009176	Miscanthus Rhizosphere	MTVPPNLLWTPEEDDELRSSILASKDIATIAKELNRSQTAIRRRAAKLKLPLKVVALGLKAKQK*
Ga0105237_104524532	3300009545	Corn Rhizosphere	LWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRAAKLKLPLKVVAVGLKAMPAK*
Ga0105238_113556042	3300009551	Corn Rhizosphere	MLPPNPLWTPEEDDELRSSILASKDIATIAEELSPTQKAIRRRATKLKLPLKVVTVRLKGKAK*
Ga0105249_113903193	3300009553	Switchgrass Rhizosphere	MTVPPNLLWTPEEDDELRSSILASKDIATIAKEFNRSQTAIRRRAAKLKLPLKV
Ga0134111_105444591	3300010329	Grasslands Soil	MMVPRNPLWTPEEDDKLRSLIISSKDIATIAKQLNRTQKAIRDRAAKLKLPLKLIAVGLKAKR*
Ga0105239_101971066	3300010375	Corn Rhizosphere	KKSENISTGSHPPACRAAEGEMTVPPNPLWTPEEDDELRSLILASKDIATIAKELNRTQKAIRRRATKLKLPLKVVTVRLKGKAK*
Ga0134124_119452323	3300010397	Terrestrial Soil	MLPPNPLRTPEEDDELRSSILASKDIATIAQELSPTQKAIRRRASKLKLPLKVVKLELKEKAK*
Ga0134121_100928223	3300010401	Terrestrial Soil	MTVPRNFLWTPEEDDELRSSILASKDIATIAKELNRTQKAIRRRATKLKLPLKVVTVRLKGKAK*
Ga0157291_103286233	3300012902	Soil	WTPEEDDELRSSILASKDIATIAKEFNRSQTAIRRRAAKLKLPLKVVTLGLKAKQK*
Ga0164300_109161742	3300012951	Soil	MTVPRNPLWTPEEDGKLRSLILSSEDIATIATQLNRSEKAVRNIAWKLRLPLKVVAVGLGAKTK*
Ga0164299_104302402	3300012958	Soil	MVLRNPLWTPEEDDKLRSLILSSKDVATIAKQLNRTRRAIRGRAAKLKLPWKVVAVGLKAKGK*
Ga0164299_107701771	3300012958	Soil	MMLPLNPLWTPEEDDELPSSILASKDIATIAQELNRTQKAIRRRASKLKLPLKVVELGLKAKAK*
Ga0164299_110752642	3300012958	Soil	MTVPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQKAIRRRTTKLKLPLKVVTVGKAKGK*
Ga0164302_103702633	3300012961	Soil	MTAPPGRSWTPEEMNKLRSSILASTDLATIAKALNRTQTAIRRKASKMKLPLKIVAVELWLKAKGK*
Ga0164302_105688472	3300012961	Soil	MVPRNPLWTPEEDDKLRSLILSSKDVATIAKQLNRTRRAIRGRAAKLKLPWKVVAVGLKAKGK*
Ga0164302_114960331	3300012961	Soil	MLSPNPWWTPEERSSILASKDIATIAKELNRTQKAIRRRATKLKLPLKVVTVRLKGKAK*
Ga0164306_110782771	3300012988	Soil	VPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRAAKMKLPLKVVAIELGLKAKK*
Ga0164305_107365192	3300012989	Soil	LRAKGEMMVRNPLWTPEEDDKLRSLILSSKDIATIAKQLNRTRRAIRGRAAKLKLPSKVVAVGLKAK*
Ga0163162_104544524	3300013306	Switchgrass Rhizosphere	MTVPPNLLWTPEEDDELRSSILASKDIATIAKEFNRSQTAIRRRAAKLKLPLKVVTLGLKAKQK*
Ga0163162_116259662	3300013306	Switchgrass Rhizosphere	LWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRAAKMKLPLKVVAIELGLKAKK*
Ga0163162_121099571	3300013306	Switchgrass Rhizosphere	RAKGEMMVRNPLWTPEEDDKLRSLILASRDVATIAKQLNRTRRAIRGRAAKLKLPSKVVAVGLKAK*
Ga0163162_121847101	3300013306	Switchgrass Rhizosphere	LWTPEEDDKLRSLVLSSKDIPTIAKQLNRTPRAIRGRAVKLKLPLKIVAVGLKAKGK*
Ga0157380_113198293	3300014326	Switchgrass Rhizosphere	RVPRNFLWTPEEDDELRSSILASKDIATIAKELNRTQTAIRRRAAKLKLPLKVVSVELKAKGK*
Ga0157380_131001532	3300014326	Switchgrass Rhizosphere	LKTKAPKAKDEMMLPLNPLWTPEEDDELPSSILASKDIATIAQELNRTQKAIRRRASKLKLPLKVVELGLKAKAK*
Ga0157377_100291931	3300014745	Miscanthus Rhizosphere	MRVPRNFLWTPEEDDELRSSILASKDIAIIAKELNRTQTAIRRRAAKLKLPLKVVAVGLKAMPAK*
Ga0132258_104115271	3300015371	Arabidopsis Rhizosphere	MTVPRNFLWTPEEDDELRSSKLASKDIATIAKKLNRTQTAIRRRAAKMKLPLKVVAIEPGLKAKK*
Ga0132258_134548342	3300015371	Arabidopsis Rhizosphere	MTAPPGRSWTPEEMNKLRSSILASKDLATIAKELNRTQTAIRRKASKMKLPLKIVAVELWLKAKGK*
Ga0132256_1005143971	3300015372	Arabidopsis Rhizosphere	MTVPRNFLWTPEEDDELRSSKLASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVTVGLKAKPSK*
Ga0132256_1023379901	3300015372	Arabidopsis Rhizosphere	MTAPPGRSWTPEETNKLRSSILASKDLATIAKELNRTQTAIRRKASKMKLPLKIVAVELWLKAKGK*
Ga0132255_1023484941	3300015374	Arabidopsis Rhizosphere	RNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVTVGKAKGK*
Ga0132255_1061307401	3300015374	Arabidopsis Rhizosphere	MTVPRNFLWTPEEDDELRSSKLASKDIATIAKKLNRTQTAIRRRAAKLKLPLKVVTIGPVPKAKMTNA
Ga0163161_104932153	3300017792	Switchgrass Rhizosphere	VPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRAAKMKLPLKVVAIELGLKAKK
Ga0163161_108498352	3300017792	Switchgrass Rhizosphere	MRVPRNFLWTPEEDDELRSSILASKDIAIIAKELNRTQTAIRRRAAKLKLPLKVVSVELKAK
Ga0163161_112238651	3300017792	Switchgrass Rhizosphere	QSMVRNPLWTPEEDDKLRSLILASKDVATIAKQLNRTRRAIRGRAAKLKLPSKVVAVGLKAK
Ga0190270_134296252	3300018469	Soil	FHESPAFRAGAEGEDEMMLPPNPLWTPEEDDELRSLVISSKDIATIAKKLNRTQTAIRRRATKLKLLLKVVTVGKTKGK
Ga0190271_100271365	3300018481	Soil	MTVPRNFLWTPKEDDELRSSILASKDIATIAKKLNRTQTAIRRRATKLKLLLKVVTVGKTKGK
Ga0190264_101277332	3300019377	Soil	MSYRRLVEAGAEGEDEMMLPPNPRWTPEEDDQLRSLVISSKYIATIAEQLNRTHKAIRRRATKLKLSLKVVEVGLKAKGE
Ga0207697_103712601	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	RPRLSHPIKKSENISTGSHPPACRAAEGEMTVPPNPLWTPEEDDELRSLILASKDIATIAKELNRTQKAIRRRATKLKLPLKVVTVRLKGKAK
Ga0207642_101975661	3300025899	Miscanthus Rhizosphere	EEDDELRSSILASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVTVGKAKGK
Ga0207642_102295281	3300025899	Miscanthus Rhizosphere	AFENQSPPPGKGEMTVPRNFLWTPEEDDELRSSILASKDIATIAKQLNRTQTAIRRRAAKLKLPLKVVAVGLKAMPAK
Ga0207688_105876512	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	LWTPEEDDELRSSILASKDIAIIAKELNRTQTAIRRRAAKLKLPLKVVSVELKAKGK
Ga0207680_100803791	3300025903	Switchgrass Rhizosphere	GSHPPACRAAEGEMTVPPNPLWTPEEDDELRSLILASKDIATIAKELNRTQKAIRRRATKLKLPLKVVTVRLKGKAK
Ga0207680_108357001	3300025903	Switchgrass Rhizosphere	GGRGMRVPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVTVGKAKGK
Ga0207645_100477063	3300025907	Miscanthus Rhizosphere	MTVPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVAVGLKAKPAK
Ga0207643_100719952	3300025908	Miscanthus Rhizosphere	MTVPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVTVGKAKGK
Ga0207694_113054882	3300025924	Corn Rhizosphere	MRVPRNFLWTPEEDDELRSSILASKDIATIAKELNRTQTAIRRRAAKLKLPLKVVSVELKAKGK
Ga0207701_107809022	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	KPPQGKGEMTVPRNFLWTPEEDDELRSSILASKDIATIAKQLNRTQTAIRRRAAKLKLPLKVVAVGLKAMPAK
Ga0207690_104677872	3300025932	Corn Rhizosphere	MTVPRNFLWTPEEDDELRSSILASKDIATIAKQLNRTQTAIRRRAAKLKLPLKVVAVGLKAKPAK
Ga0207706_101443223	3300025933	Corn Rhizosphere	PKPPPGKGEMTVPRNFLWTPEEDDELRSSILASKDIATIAKQLNRTQTAIRRRAAKLKLPLKVVAVGLKAMPAK
Ga0207706_115214351	3300025933	Corn Rhizosphere	MVPRNILWTPEEDDELRSSMLASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVAVGLKA
Ga0207686_104306351	3300025934	Miscanthus Rhizosphere	RQSGSRGRLRGRRLRKPKPPQGKGEMTVPRNFLWTPEEDDELRSSILASKDIATIAKQLNRTQTAIRRRAAKLKLPLKVVAVGLKAMPAK
Ga0207669_100643916	3300025937	Miscanthus Rhizosphere	MVPRNILWTPEEDDELRSSMLASKDIATIAKKLNRTQTAIRRRATKLKLPLKVVAVGLKAKPAK
Ga0207669_116551652	3300025937	Miscanthus Rhizosphere	MTVPPNLLWTPEEDDELRSSILASKDIATIAKEFNRSQTAIRRRAAKLKLPLKVVTLGLKAKQK
Ga0207668_104625812	3300025972	Switchgrass Rhizosphere	MRVPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRAVKMKLPLKVVAIELELKAKK
Ga0207703_123956902	3300026035	Switchgrass Rhizosphere	EMTVPRNFLWTPEEDDELRSSILASKDIATIAKQLNRTQTAIRRRAAKLKLPLKVVAVGLKAMPAK
Ga0207641_110828413	3300026088	Switchgrass Rhizosphere	VPRNFLWTPEEDDELRSSILASKDIAIIAKELNRTQTAIRRRAAKLKLPLKVVSVELKAKGK
Ga0207648_112043932	3300026089	Miscanthus Rhizosphere	PKAKDEMMLPLNPLWTPEEDDELPSSILASKDIATIAQELNRTQKAIRRRASKLKLPLKVVELGLKAKAK
Ga0207683_115069011	3300026121	Miscanthus Rhizosphere	TPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRAAKMKLPLKVVAIELGLKAKK
Ga0207698_122786962	3300026142	Corn Rhizosphere	MTVPPNLLWTPEEDDELRSSILASKDIATIAKQLNRTQTAIRRRAAKLKLPLKVVAVGLKAMPAK
Ga0207983_10240453	3300027310	Soil	MTVLPNLLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRKASKMKLPLKIVAVELWLKAKGK
Ga0207428_111985612	3300027907	Populus Rhizosphere	MTVPRNILWTPEEDDELRLSILASKDIATIAEELNRTKTAIRRRAEVVVVGLKAKGK
Ga0268265_117789681	3300028380	Switchgrass Rhizosphere	KTKAPPGKGEMTVPRNFLWTPEEDDELRSSILASKDIATIAKQLNRTQTAIRRRAAKLKLPLKVVAVGLKAMPAK
Ga0268264_120344551	3300028381	Switchgrass Rhizosphere	KDEMMLPLNPLWTPEEDDELPSSILASKDIATIAQELNRTQKAIRRRASKLKLPLKVVELGLKAKAK
Ga0307498_100559872	3300031170	Soil	MVPRNPLWTPEEDVKLRSLIISSKDIATIAKQLNRTQKAIRDRAAKLKLPLKLVAVGLKAKR
Ga0307468_1002821583	3300031740	Hardwood Forest Soil	NISTGSHPPACRAADGEMTVPPNPLWTPEEDDELRSLILASKDIATIAKELNRTQKAIRRRATKLKLPLKVVTVRLKGKAK
Ga0307468_1005616221	3300031740	Hardwood Forest Soil	EEDDELRSSILASKDIATIAKELNRTQTAIRRRATKLKLPLKVVTVGKAKGK
Ga0310902_113130372	3300032012	Soil	MTVPRNFLWTPEEDDELRSSILASKDIATIAKKLNRTQTAIRRRAVKMKLPLKVVAIELELKAKK
Ga0310890_115428212	3300032075	Soil	MTVPRNFLWTPEEDDELRSSILASKDIATIAKQLNRTQTAIRRRAAKLKLPLKVVAVGLKAMPAK
Ga0307472_1018588902	3300032205	Hardwood Forest Soil	MRVPPNFLWTQEEDDELRSSILTSKDIATIAKKLNRTQTAIRRRAEVVVVGLKAKGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087364

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences