Metagenome Family F087345

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F087345
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	65 residues
Representative Sequence	MSENNGIFIVRSIANTVNTITELDALIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD
Number of Associated Samples	83
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	29.09 %
% of genes near scaffold ends (potentially truncated)	21.82 %
% of genes from short scaffolds (< 2000 bps)	82.73 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (69.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.909 % of family members)
Environment Ontology (ENVO)	Unclassified (60.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (72.727 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.29% β-sheet: 0.00% Coil/Unstructured: 38.71%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.47.2.1: t-snare proteins	d1fioa_	1fio	0.92135
a.2.6.1: HR1 repeat	d1cxzb_	1cxz	0.91224
a.25.1.3: Manganese catalase (T-catalase)	d1o9ia_	1o9i	0.90179
a.25.1.1: Ferritin	d6txia_	6txi	0.90162
a.25.1.1: Ferritin	d3ka8a_	3ka8	0.89811

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00171	Aldedh	22.73
PF02548	Pantoate_transf	16.36
PF13568	OMP_b-brl_2	3.64
PF13090	PP_kinase_C	1.82
PF11827	DUF3347	0.91
PF02541	Ppx-GppA	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	22.73
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	22.73
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	22.73
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	16.36
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	1.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.09 %
Unclassified	root	N/A	30.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.09 %
Unclassified	root	N/A	30.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.09 %
Unclassified	root	N/A	30.91 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	56.36 %
Unclassified	root	N/A	30.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.82 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	56.36 %
Unclassified	root	N/A	30.91 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.82 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	56.36 %
Unclassified	root	N/A	30.91 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.91 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	28.18 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	9.09 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	1.82 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.82 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.91 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	28.18 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	9.09 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1.82 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.82 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.91 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	28.18 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	9.09 %
Mycobacteroides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides	1.82 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1.82 %
unclassified Saprospirales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.91 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	28.18 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	9.09 %
Mycobacteroides abscessus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus	1.82 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1.82 %
Saprospirales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.91 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	28.18 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	9.09 %
Mycobacteroides abscessus subsp. abscessus	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	1.82 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1.82 %
Saprospirales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	0.91 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0261116	Not Available	517	Open in IMG/M
3300000156\|NODE_c0324457	Not Available	620	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101448999	Not Available	998	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101449600	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	972	Open in IMG/M
3300000559\|F14TC_100579797	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	893	Open in IMG/M
3300003152\|Ga0052254_1138395	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	678	Open in IMG/M
3300004114\|Ga0062593_100116267	All Organisms → cellular organisms → Bacteria	1935	Open in IMG/M
3300004114\|Ga0062593_100333704	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1315	Open in IMG/M
3300004114\|Ga0062593_101114209	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	820	Open in IMG/M
3300004157\|Ga0062590_100764309	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	882	Open in IMG/M
3300004463\|Ga0063356_100076593	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	3509	Open in IMG/M
3300005293\|Ga0065715_11127981	Not Available	514	Open in IMG/M
3300005294\|Ga0065705_10175282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	1632	Open in IMG/M
3300005328\|Ga0070676_10015042	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	4263	Open in IMG/M
3300005328\|Ga0070676_10102313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacteroides → Mycobacteroides abscessus → Mycobacteroides abscessus subsp. abscessus	1772	Open in IMG/M
3300005328\|Ga0070676_10208235	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1285	Open in IMG/M
3300005329\|Ga0070683_100068799	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	3299	Open in IMG/M
3300005329\|Ga0070683_100530482	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1125	Open in IMG/M
3300005332\|Ga0066388_101197878	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1298	Open in IMG/M
3300005334\|Ga0068869_100608473	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	924	Open in IMG/M
3300005335\|Ga0070666_10194325	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1427	Open in IMG/M
3300005335\|Ga0070666_10201026	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1402	Open in IMG/M
3300005337\|Ga0070682_101134123	Not Available	656	Open in IMG/M
3300005338\|Ga0068868_100162717	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1844	Open in IMG/M
3300005339\|Ga0070660_100947289	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	727	Open in IMG/M
3300005344\|Ga0070661_100546763	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300005353\|Ga0070669_100959382	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	732	Open in IMG/M
3300005354\|Ga0070675_100948723	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	789	Open in IMG/M
3300005355\|Ga0070671_100210653	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1648	Open in IMG/M
3300005355\|Ga0070671_100452221	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1102	Open in IMG/M
3300005367\|Ga0070667_100267925	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1531	Open in IMG/M
3300005455\|Ga0070663_101149532	Not Available	680	Open in IMG/M
3300005459\|Ga0068867_101023079	Not Available	750	Open in IMG/M
3300005535\|Ga0070684_100001858	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	15463	Open in IMG/M
3300005543\|Ga0070672_100371143	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1222	Open in IMG/M
3300005563\|Ga0068855_101503436	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300005578\|Ga0068854_100044195	All Organisms → cellular organisms → Bacteria	3161	Open in IMG/M
3300005615\|Ga0070702_100945549	Not Available	678	Open in IMG/M
3300005617\|Ga0068859_101366353	Not Available	781	Open in IMG/M
3300005841\|Ga0068863_100413414	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1321	Open in IMG/M
3300005841\|Ga0068863_101767169	Not Available	628	Open in IMG/M
3300005844\|Ga0068862_100434972	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1234	Open in IMG/M
3300006046\|Ga0066652_100112495	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2218	Open in IMG/M
3300006237\|Ga0097621_101374421	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	668	Open in IMG/M
3300006237\|Ga0097621_102417713	Not Available	503	Open in IMG/M
3300006358\|Ga0068871_102402468	Not Available	503	Open in IMG/M
3300006954\|Ga0079219_10018351	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2534	Open in IMG/M
3300009176\|Ga0105242_10068450	All Organisms → cellular organisms → Bacteria	2937	Open in IMG/M
3300009553\|Ga0105249_12835600	Not Available	556	Open in IMG/M
3300010400\|Ga0134122_12695250	Not Available	549	Open in IMG/M
3300010400\|Ga0134122_13005173	Not Available	526	Open in IMG/M
3300010403\|Ga0134123_10834009	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	920	Open in IMG/M
3300012212\|Ga0150985_119346740	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	689	Open in IMG/M
3300012469\|Ga0150984_114409069	Not Available	616	Open in IMG/M
3300012948\|Ga0126375_10699610	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	789	Open in IMG/M
3300012951\|Ga0164300_10921796	Not Available	554	Open in IMG/M
3300012955\|Ga0164298_10295778	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1000	Open in IMG/M
3300012957\|Ga0164303_10669639	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	694	Open in IMG/M
3300012957\|Ga0164303_11117352	Not Available	570	Open in IMG/M
3300012960\|Ga0164301_10277446	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1116	Open in IMG/M
3300012984\|Ga0164309_11458636	Not Available	585	Open in IMG/M
3300012986\|Ga0164304_10548379	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	854	Open in IMG/M
3300012986\|Ga0164304_11784209	Not Available	515	Open in IMG/M
3300012989\|Ga0164305_10102254	Not Available	1842	Open in IMG/M
3300013102\|Ga0157371_10869269	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300013297\|Ga0157378_11285900	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	772	Open in IMG/M
3300014326\|Ga0157380_11682344	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → unclassified Saprospirales → Saprospirales bacterium	692	Open in IMG/M
3300014745\|Ga0157377_10020768	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	3445	Open in IMG/M
3300014745\|Ga0157377_11134802	Not Available	601	Open in IMG/M
3300014968\|Ga0157379_11168230	Not Available	739	Open in IMG/M
3300014969\|Ga0157376_10065865	All Organisms → cellular organisms → Bacteria	3061	Open in IMG/M
3300015371\|Ga0132258_10005966	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	24077	Open in IMG/M
3300015371\|Ga0132258_11840341	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300015371\|Ga0132258_13952789	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1007	Open in IMG/M
3300015372\|Ga0132256_100834612	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1038	Open in IMG/M
3300015372\|Ga0132256_101034314	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	936	Open in IMG/M
3300015374\|Ga0132255_100256416	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2501	Open in IMG/M
3300015374\|Ga0132255_100768998	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1434	Open in IMG/M
3300015374\|Ga0132255_101304754	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300015374\|Ga0132255_102068004	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	867	Open in IMG/M
3300015374\|Ga0132255_105738436	Not Available	525	Open in IMG/M
3300023077\|Ga0247802_1059889	Not Available	614	Open in IMG/M
3300025899\|Ga0207642_10298456	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	933	Open in IMG/M
3300025903\|Ga0207680_10211375	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1326	Open in IMG/M
3300025904\|Ga0207647_10035745	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	3163	Open in IMG/M
3300025907\|Ga0207645_10018833	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	4535	Open in IMG/M
3300025907\|Ga0207645_10246097	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1182	Open in IMG/M
3300025907\|Ga0207645_10423412	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	897	Open in IMG/M
3300025919\|Ga0207657_11229375	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	568	Open in IMG/M
3300025920\|Ga0207649_10586297	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	856	Open in IMG/M
3300025923\|Ga0207681_10672824	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	859	Open in IMG/M
3300025926\|Ga0207659_10549685	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	981	Open in IMG/M
3300025926\|Ga0207659_10954214	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300025931\|Ga0207644_11305238	Not Available	610	Open in IMG/M
3300025933\|Ga0207706_10024325	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5430	Open in IMG/M
3300025934\|Ga0207686_11352658	Not Available	585	Open in IMG/M
3300025938\|Ga0207704_10029461	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3062	Open in IMG/M
3300025940\|Ga0207691_10058842	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3495	Open in IMG/M
3300025949\|Ga0207667_11234397	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300025960\|Ga0207651_11728675	Not Available	563	Open in IMG/M
3300025961\|Ga0207712_11873887	Not Available	537	Open in IMG/M
3300026142\|Ga0207698_10464530	Not Available	1225	Open in IMG/M
3300026142\|Ga0207698_10660158	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1037	Open in IMG/M
3300028379\|Ga0268266_10794387	Not Available	914	Open in IMG/M
3300028380\|Ga0268265_10881232	Not Available	878	Open in IMG/M
3300028380\|Ga0268265_11536471	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	670	Open in IMG/M
3300028381\|Ga0268264_11313720	Not Available	733	Open in IMG/M
3300031716\|Ga0310813_10058453	All Organisms → cellular organisms → Bacteria	2869	Open in IMG/M
3300031716\|Ga0310813_12343223	Not Available	506	Open in IMG/M
3300033412\|Ga0310810_10149607	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2713	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	67.27%
Environmental	Environmental	31.82%
Engineered	Engineered	0.91%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	67.27%
Terrestrial	Environmental → Terrestrial	30.91%
Aquatic	Environmental → Aquatic	0.91%
Solid Waste	Engineered → Solid Waste	0.91%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.18%
Soil	Environmental → Terrestrial → Soil	30.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	26.36%
Roots	Host-Associated → Plants → Roots	2.73%
Freshwater	Environmental → Aquatic → Freshwater	0.91%
Grass	Engineered → Solid Waste → Grass	0.91%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	28.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	24.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	9.09%
Loam	Environmental → Terrestrial → Soil → Loam	6.36%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.73%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.91%
Composting	Engineered → Solid Waste → Grass → Composting	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	28.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	9.09%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.64%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.73%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	10.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	10.00%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	7.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.64%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.82%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.91%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.91%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_02611161	2228664022	Soil	GIFIVRSIANTVNTITELDALIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD
NODE_03244571	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MNENNGIFIVRSIANTVNTISELDDLILKEKEGGHLNNLKKRREQLIDVLKKLAQELDAETKPLD*
INPhiseqgaiiFebDRAFT_1014489992	3300000364	Soil	MGENNGIFIVRSIANTVNTITELDALIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD*
INPhiseqgaiiFebDRAFT_1014496002	3300000364	Soil	MSESNRIFIVRSIANTVNTISELDVLILNEKDKVHINQLKKRREQLIEVLKELAQELDAETKPLD*
F14TC_1005797971	3300000559	Soil	MSENNELFIVVRGIANTVNTITELDDLILKEKDEMRLDELKKRREQLIDVLKELAQELNAETKALD*
Ga0052254_11383951	3300003152	Sediment	MSDNDGIFVIVRSIANTVSTIDELDVLIINERDESHINELKKRRQQLIDILKKLAQ
Ga0062593_1001162672	3300004114	Soil	MGEDNEIFIVVRSIANTVNTVGELDKLIINEKDECCINELKKRREQLIGLLRELAQELDSEAKPLDS*
Ga0062593_1003337042	3300004114	Soil	MNENNEIFIVRSIANTVNTISELDDLILKEKEEEHLNNLKRRREQLIEVLKKLAQELGAETKPFD*
Ga0062593_1011142092	3300004114	Soil	MSENNEIFIVVRGIANTVNTITELDDLITKEKDEVRLDELKKRREQLVDVLKELAQELNAETKALD*
Ga0062590_1007643091	3300004157	Soil	KYMSENNEIFIVVRGIANTVNTITELDDLITKEKDEVRLDELKKRREQLVDVLKELAQELNAETKALD*
Ga0063356_1000765932	3300004463	Arabidopsis Thaliana Rhizosphere	MNDNSGMFIVRSIANTVNTINELDDLIIKEEDEVRLNELKMRREQLIEVLKGLAQELEAETKPLK*
Ga0065715_111279811	3300005293	Miscanthus Rhizosphere	MSENNEIFIVVRGIANTVNTITELDDLITKEKDEVRLDELKKRREQLIDVLKELAQELNAETKALD*
Ga0065705_101752822	3300005294	Switchgrass Rhizosphere	MRGNNGIFVVRSIANTVNTISELDDLILKEKDETLLSDLTRRREQLIEVLKELAQELNAETKPLD*
Ga0070676_100150421	3300005328	Miscanthus Rhizosphere	MDENNGIFIVRSIANTVNTITELDDLILKEKEEASINELKKRREQLVEVLKTLAQQLDAQAKQLD*
Ga0070676_101023131	3300005328	Miscanthus Rhizosphere	MSENNGIFIVRSIANTVNTISKLDALIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD*
Ga0070676_102082353	3300005328	Miscanthus Rhizosphere	MNENNGLFIVRSIANTVNTINELDDLITKETDGVDINNLKKRREELIEVLKKLARELDAETRPLD*
Ga0070683_1000687995	3300005329	Corn Rhizosphere	LFIVRSIANTVNTINELDDLITKETDGVDINNLKKRREELIEVLKKLARELDAETRPLD*
Ga0070683_1005304822	3300005329	Corn Rhizosphere	MSENNGIFIVRSIANTVNTITELDALIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD*
Ga0066388_1011978782	3300005332	Tropical Forest Soil	MSENNEIFVVVRGIANTVNTITELDDLIIKESDEVRLDELKKRREQLIDVLKELAQELNAETRPLN*
Ga0068869_1006084731	3300005334	Miscanthus Rhizosphere	NEIFIVVRGIANTVNTITELDDLITKEKDEVRLDELKKRREQLVDVLKELAQELNAETKALD*
Ga0070666_101943251	3300005335	Switchgrass Rhizosphere	MSENNGIFIVRSIANTVNTITELDTLIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD*
Ga0070666_102010262	3300005335	Switchgrass Rhizosphere	MNENNGLFIVRSIANTVNTISELDDLITKETEGVDINNLKKRREELIEVLKKLARELDAETRPLD*
Ga0070682_1011341232	3300005337	Corn Rhizosphere	MNENNRLFIVRSIANTVNTINELDDLITKETDGVDINNLKKRREELIEVLKKLARELDAETRPLD*
Ga0068868_1001627172	3300005338	Miscanthus Rhizosphere	MSESNEIFIVVRGIANTVNTITELDDLITKEKDEVRLDELKKRREQLVDVLKELAQELNAETKALD*
Ga0070660_1009472891	3300005339	Corn Rhizosphere	MSENNDIFIVVRGIANTVNTITELDDLIIKEKDEMRLDELKKRREQLIDVLKELAQELNAETKPLD*
Ga0070661_1005467632	3300005344	Corn Rhizosphere	MNENGIFIVRTIANTVNTITELDDLIIEEKDEVRLDQLKKRREQLIGVLKELAQELDAETQPLH*
Ga0070669_1009593822	3300005353	Switchgrass Rhizosphere	ENNRLFIVRSIANTVNTINELDDLITKETDGVDINNLKKRREELIEVLKKLARELDAETRPLD*
Ga0070675_1009487232	3300005354	Miscanthus Rhizosphere	MSENNGIFIVRSIANTVNTISELDALIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD*
Ga0070671_1002106533	3300005355	Switchgrass Rhizosphere	PMSENNGIFIVRSIANTVNTITELDALIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD*
Ga0070671_1004522211	3300005355	Switchgrass Rhizosphere	MGENNGIFIVRSIANTVNTISELDALITNEQDEVHINELKKRREQLIQVLKELAQELNAETKPLD*
Ga0070667_1002679253	3300005367	Switchgrass Rhizosphere	PMSENNGIFIVRSIANTVNTITELDTLIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD*
Ga0070663_1011495321	3300005455	Corn Rhizosphere	MDENNGIFIVRSIANTVNTITELDTLIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD*
Ga0068867_1010230792	3300005459	Miscanthus Rhizosphere	MSENNEIFIVVRGIANTVNTITELDDLITKEKDEVRLDELKKRREQLIDVLKELAQELNAEAKALD*
Ga0070684_1000018587	3300005535	Corn Rhizosphere	MSENNEIFIVVRGIANAVNTITELDDLITKEKDEVRLDELKKRREQLVDVLKELAQELNAETKALD*
Ga0070672_1003711432	3300005543	Miscanthus Rhizosphere	MSENNEIFIVVRGIANTVNTITELDDLITKEKDDVRLDELKKRREQLIDVLKELAQELNAETKALD*
Ga0068855_1015034362	3300005563	Corn Rhizosphere	MRENNGIFIVRSIANTVNTISELDDLILKEKDETLLNDLTKRREQLIEVLKALAQELDAETKPLD*
Ga0068854_1000441953	3300005578	Corn Rhizosphere	MSENNGIFIVRSIANTVNTITELDTLIINEKDEVHINELKKRREQLIEILKELAQELDAETKPLD*
Ga0070702_1009455491	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSENNGIFIVRSIANTVNTITELDALIINEKDEVHLNELKKRREQLIEVLKELAQELDAETKPLD*
Ga0068859_1013663532	3300005617	Switchgrass Rhizosphere	ENNGIFIVRSIANTVNTITELDDLILKEKEEASINELKKRREQLVEVLKTLAQQLDAQAKQLD*
Ga0068863_1004134143	3300005841	Switchgrass Rhizosphere	MSENNGIFIVRSIANTVNTISELDALIINEQDEVHINELKKRREQLIQVLKELAQELNAETRPLD*
Ga0068863_1017671691	3300005841	Switchgrass Rhizosphere	MDENNGIFIVRSIANTVNTITELDALIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD*
Ga0068862_1004349722	3300005844	Switchgrass Rhizosphere	MSENNEIFIVVRGIANTVNTITELDDLIIKEKDEMRLDELKKRREQLIDVLKELAQELNAETKPLD*
Ga0066652_1001124952	3300006046	Soil	MSENNGTFIVRSIANTVNTISELDALIVNEKDEVRINELKKRKEQLIEVLKELAQELDAETKPPD*
Ga0097621_1013744212	3300006237	Miscanthus Rhizosphere	IVRSLANTVNTISELDDLIIKHEDGVDLNDLKKRREQLIEVLKELTQELDAETKPLD*
Ga0097621_1024177131	3300006237	Miscanthus Rhizosphere	ENNGIFIVRSIANTVNTISELDVLIVNEKDEVRINELKKREQLIEVLKELAQELDAETRPLD*
Ga0068871_1024024682	3300006358	Miscanthus Rhizosphere	MGENNGIFIVRSIANTVNTISELDALITNEQDEVHINELTKRREQLIQVLKELAQELNAETKPLD*
Ga0079219_100183513	3300006954	Agricultural Soil	MSENDGIFIVVRSIANTASTIGELDSLILNERDESRLNELRKRKEQLIDVLKELAQELDSEAKPLDQ*
Ga0105242_100684503	3300009176	Miscanthus Rhizosphere	MSENNGIFIVRSIANTVNTITELDALIINEKDEVHLNELKKRREQLIEVLKELAQDLDAETKPLD*
Ga0105249_128356002	3300009553	Switchgrass Rhizosphere	MSENNGIFIVTSIANTVNTISELDALIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD*
Ga0134122_126952502	3300010400	Terrestrial Soil	MSENNNGIPVVVKSISNTVNTIGELDALIKSEKDEARIEELKKRREQLIEVLKKLAEELDAEANPLD*
Ga0134122_130051732	3300010400	Terrestrial Soil	MSEDNGIFIVRSIANTVNTISELDVLILNEKDEAHIIELKKRREQLIEVLKELAQELDAETKPLD*
Ga0134123_108340091	3300010403	Terrestrial Soil	MSENNEIFIVVRGIANTVNTITELDDLIIKEKDEMRLDELKKRREQLIDVLKEL
Ga0150985_1193467402	3300012212	Avena Fatua Rhizosphere	MSENNGTFIVRSIANAVNTISELDALIVNEKDEVRIHELKKRREQLIEVLKELAQELDAETKPPD*
Ga0150984_1144090692	3300012469	Avena Fatua Rhizosphere	MSENNGTVIVRSIANAVNTISELDALIVSEKDEVRIHELKKRREQLIEVLKELAQELDAETKPPD*
Ga0126375_106996101	3300012948	Tropical Forest Soil	MNLDNGIAIVVRSIANTVNTIDELDALIINEKDEVRINELKKRREQLIEVLKGLAHELDAEAKPLD*
Ga0164300_109217961	3300012951	Soil	MSENNEIFIVVRGIANTVNTITELDDLITKEKDEVRLDELKKRREQLIDVLKDLAQELNAETKALD*
Ga0164298_102957781	3300012955	Soil	MSENNGIFIVRSIANTVNTITELDALIINEKDEVRLNELKKRREQLIEVLKELAQDLDAETKPLD*
Ga0164303_106696391	3300012957	Soil	MGENNGIFIVRSIANTVNTISELDVLIVNEKDEVRINELKKREQLIEVLKELAQELNAETKALD*
Ga0164303_111173521	3300012957	Soil	MSENNQLFIVVRGIANTVNTITELDDLIMKEKDEMRLDELKKRREQLIDVLKELAQ
Ga0164301_102774462	3300012960	Soil	MSENNQLFIVVRGIANTVNTITELDDLIIKEGDEMRLDEIKKRREQLIDVLKELAQELNAETRPLD*
Ga0164309_114586361	3300012984	Soil	MSENNGIFIVRSIANTVNTITELDALIINEKDEVHINELKKRREQLIEVLKELAQDLDAETKPLD*
Ga0164304_105483792	3300012986	Soil	MSENNEIFIVVRGIANTVNTITELDDLIMKEKDEMRLDELKKRREQLIDVLKELAQELNAETKALD*
Ga0164304_117842091	3300012986	Soil	MSENNGIFIVRSIANTVNTISELDDLISKEKEEEHLNNLKRRREQLIEVLKKLAQELDAEAKPSD*
Ga0164305_101022542	3300012989	Soil	MSENNGIFIVRSIANTVNTITELDALIINEKDEAHSNELKKRREQLIEVLKELAQDLDAETKPLD*
Ga0157371_108692691	3300013102	Corn Rhizosphere	IIIFQPIISFSVMDENNGIFIVRSIANTVNTITELDDLILKEKEEASINELKKRREQLVEVLKTLAQQLDAQAKQLD*
Ga0157378_112859002	3300013297	Miscanthus Rhizosphere	MNENNRLFIVRSIANTVNTINELDDLITKETDGVDINNLKKRREELIEVLKKL
Ga0157380_116823442	3300014326	Switchgrass Rhizosphere	MSENNEIFIVVRGIANTVNTITELDDFITKEKDEVLLDELKKRREQLIDVLKELAQELNAETKALD*
Ga0157377_100207682	3300014745	Miscanthus Rhizosphere	MDENNGIFIVRSIANTVNTINELDDLILKEKEEASINELKKRREQLVEVLKTLAQQLDAQAKQLD*
Ga0157377_111348023	3300014745	Miscanthus Rhizosphere	LFIVRSIANTVNTISELDDLITKETEGVDINNLKKRREELIEVLKKLARELDAETRPLD*
Ga0157379_111682302	3300014968	Switchgrass Rhizosphere	MNENNGLFIVRSIANTVNTINELDDLITKETEGVDINNLKKRREELIEVLKKLARELDAETRPLD*
Ga0157376_100658652	3300014969	Miscanthus Rhizosphere	MGENNGIFIVRSIGNTVNTISELDALITNEQDEAHINELTKRREQLIQVLKELAQELNAETKPLD*
Ga0132258_100059666	3300015371	Arabidopsis Rhizosphere	MSENNGIFIVRSIANTVNTISELDDLILKEKEEEHLNSLKRRREQLIEVLKKLAQELDAEAKPDD*
Ga0132258_118403413	3300015371	Arabidopsis Rhizosphere	MSENNGIFIVRSIANTVNTISELDALILSEKDEVRLNELKKRREQLIDVLRGLAQELDAETKPLD*
Ga0132258_139527892	3300015371	Arabidopsis Rhizosphere	MSENNEIFIVVRGIANTLNTITELDDLIIKEKDEMRLDELKRRREQLIDVLKELAQELNAETKALD*
Ga0132256_1008346122	3300015372	Arabidopsis Rhizosphere	ENNEIFIVVRGIANTVNTITELDDLITKEKDEVRLDELKKRREQLIDVLKDLAQELNAETKALD*
Ga0132256_1010343141	3300015372	Arabidopsis Rhizosphere	MSENNGIFIVRSIANTVNTISELDALILSEKDEVRLTELKKRREQLIDVLRELAQELDAETKPLD*
Ga0132255_1002564163	3300015374	Arabidopsis Rhizosphere	MSENNGIFIVRSIANTVNTISELDALILSEKDEVRLNELKKRREQLIDVLRELAQELDAETKPLD*
Ga0132255_1007689982	3300015374	Arabidopsis Rhizosphere	MNENGIFIVRTIANTVNTITELDDLIKEEKDEVRLDQLKKRREQLIGVLKELAQELDAETQPLH*
Ga0132255_1013047543	3300015374	Arabidopsis Rhizosphere	FIVVRGIANTVNTITELDDLITKEKDEVRLDELKKRREQLIDVLKDLAQELNAETKALD*
Ga0132255_1020680041	3300015374	Arabidopsis Rhizosphere	MSENDQLFIVVRGIANTVNTITELDDLIIKGGDEMRLDEIKKRREQLIDVLKELAQELNAETKALD*
Ga0132255_1057384361	3300015374	Arabidopsis Rhizosphere	VGSIANTVNTISELDALIMNEQDEVHINELRKRKEQLIQVLKELAQELNAETKLLD*
Ga0247802_10598891	3300023077	Soil	MNENNEIFIVRSIANTVNTISELDDLILKEKEEEHLNNLKRRREQLIEVLKKLAQELGAETKPFD
Ga0207642_102984562	3300025899	Miscanthus Rhizosphere	MSENNGIFIVRSIANTVNTITELDALIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD
Ga0207680_102113752	3300025903	Switchgrass Rhizosphere	MSENNGIFIVRSIANTVNTITELDTLIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD
Ga0207647_100357454	3300025904	Corn Rhizosphere	MSENNEIFIVVRGIANTVNTITELDDLILKEKDEMRLDELKKRREQLIDVLKELAQELNAETKALD
Ga0207645_100188335	3300025907	Miscanthus Rhizosphere	MDENNGIFIVRSIANTVNTITELDDLILKEKEEASINELKKRREQLVEVLKTLAQQLDAQAKQLD
Ga0207645_102460972	3300025907	Miscanthus Rhizosphere	MSENNEIFIVVRGIANTVNTITELDDLITKEKDEVRLDELKKRREQLVDVLKELAQELNAETKALD
Ga0207645_104234121	3300025907	Miscanthus Rhizosphere	MNENNGLFIVRSIANTVNTINELDDLITKETDGVDINNLKKRREELIEVLKKLARELDAETRPLD
Ga0207657_112293751	3300025919	Corn Rhizosphere	MSENNGIFIVRSIANTVNTITELDTLIINEKDEVHINELKKRREQLIEVLKELAQELDAE
Ga0207649_105862972	3300025920	Corn Rhizosphere	MNENGIFIVRTIANTVNTITELDDLIIEEKDEVRLDQLKKRREQLIGVLKELAQELDAETQPLH
Ga0207681_106728241	3300025923	Switchgrass Rhizosphere	ENNRLFIVRSIANTVNTINELDDLITKETDGVDINNLKKRREELIEVLKKLARELDAETRPLD
Ga0207659_105496852	3300025926	Miscanthus Rhizosphere	MSENNGIFIVRSIANTVNTISELDALIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD
Ga0207659_109542141	3300025926	Miscanthus Rhizosphere	SFSVMDENNGIFIVRSIANTVNTITELDDLILKEKEEASINELKKRREQLVEVLKTLAQQLDAQAKQLD
Ga0207644_113052382	3300025931	Switchgrass Rhizosphere	MGENNGIFIVRSIANTVNTISELDALITNEQDEVHINELTKRREQLIQVLKELAQELNAETKPLD
Ga0207706_100243252	3300025933	Corn Rhizosphere	MSESNEIFIVVRGIANTVNTITELDDLITKEKDEVRLDELKKRREQLVDVLKELAQELNAETKALD
Ga0207686_113526582	3300025934	Miscanthus Rhizosphere	MSENNGIFIVRSIANTVNTITELDALIINEKDEVHLNELKKRREQLIEVLKELAQDLDAETKPLD
Ga0207704_100294612	3300025938	Miscanthus Rhizosphere	MSENNEIFIVVRGIANTVNTITELDDLITKEKDEVRLDELKKRREQLIDVLKELAQELNAETKALD
Ga0207691_100588423	3300025940	Miscanthus Rhizosphere	MSENNEIFIVVRGIANTVNTITELDDLITKEKDDVRLDELKKRREQLIDVLKELAQELNAETKALD
Ga0207667_112343972	3300025949	Corn Rhizosphere	MNENNGLFIVRSIANTVNTITELDDLILKEKEEASINELKKRREQLVEVLKTLAQQLDAQAKQLD
Ga0207651_117286751	3300025960	Switchgrass Rhizosphere	MSENNEIFIVVRGIANTVNTITELDDLITKEKDEVRLDELKKRREQLVDVLKELAQELNAETKA
Ga0207712_118738871	3300025961	Switchgrass Rhizosphere	MDENNGIFIVRSIANTVNTITELDDLILKEKEEASINELKKRREQLVEVLKTLAQQ
Ga0207698_104645301	3300026142	Corn Rhizosphere	IFIVRSIANTVNTITELDDLILKEKEEASINELKKRREQLVEVLKTLAQQLDAQAKQLD
Ga0207698_106601581	3300026142	Corn Rhizosphere	MSENNEIFIVVRGIANTVNTITELDDLITKEKDEVRLDELKKRREQLIDVLKELAQELNAEAKALD
Ga0268266_107943872	3300028379	Switchgrass Rhizosphere	MNENNRLFIVRSIANTVNTINELDDLITKETDGVDINNLKKRREELIEVLKKLARELDAETRPLD
Ga0268265_108812321	3300028380	Switchgrass Rhizosphere	MDENNGIFIVRSIANTVNTINELDDLITKETDGVDINNLKKRREELIEVLKKLARELDAETRPLD
Ga0268265_115364712	3300028380	Switchgrass Rhizosphere	MSENNEIFIVVRGIANTVNTITELDDLIIKEKDEMRLDELKKRREQLIDVLKELAQELNAETKPLD
Ga0268264_113137202	3300028381	Switchgrass Rhizosphere	MNENNGLFIVRSIANTVNTITELDALIINEKDEVHINELKKRREQLIEVLKELAQELDAETKPLD
Ga0310813_100584533	3300031716	Soil	MGEDNEIFIVVRSIANTVSTIGELDKLIINEKDECCINELKKRREQLIGLLRELAQELDSEAKPLDS
Ga0310813_123432232	3300031716	Soil	MGEDSEIFIVVRRIANTVSTIGELDALIINEKDECRISELKKRREQLIELLRELAQELDSEAKPLDS
Ga0310810_101496072	3300033412	Soil	MGEDNEIFIVVRSIANTVNTVGELDKLIINEKDECCINELKKRREQLIGLLRELAQELDSEAKPLDS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087345

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences