Metagenome / Metatranscriptome Family F087340

Basic Information
Family ID	F087340
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	83 residues
Representative Sequence	MNPISDIKRFLLRALGRANGVPWPDALLDEAARQGIMPRPLQSDINQAKRELENAGYLQGARDELDDLLTWTLTEKGRHKARQLG
Number of Associated Samples	88
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	24.55 %
% of genes near scaffold ends (potentially truncated)	31.82 %
% of genes from short scaffolds (< 2000 bps)	84.55 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Most Common Taxonomy
Group	Unclassified (75.455 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (18.182 % of family members)
Environment Ontology (ENVO)	Unclassified (31.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.909 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.36% β-sheet: 10.62% Coil/Unstructured: 46.02%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.4.5.0: automated matches	d3l7wa_	3l7w	0.78586
a.4.5.0: automated matches	d4hqma_	4hqm	0.78048
a.4.5.48: F93-like	d1tbxa1	1tbx	0.77635
a.4.5.0: automated matches	d5dyma_	5dym	0.77544
a.4.5.28: MarR-like transcriptional regulators	d2fbia1	2fbi	0.76735

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF03237	Terminase_6N	2.73
PF05065	Phage_capsid	1.82
PF04860	Phage_portal	1.82
PF00072	Response_reg	0.91
PF13180	PDZ_2	0.91
PF00860	Xan_ur_permease	0.91
PF08459	UvrC_RNaseH_dom	0.91
PF00005	ABC_tran	0.91
PF03486	HI0933_like	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	1.82
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.82
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	1.82
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	0.91
COG0322	Excinuclease UvrABC, nuclease subunit	Replication, recombination and repair [L]	0.91
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	0.91
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.91
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	0.91
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	0.91
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.91
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	0.91
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	0.91
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	0.91

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
All Organisms	root	All Organisms	24.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
cellular organisms	root	All Organisms → cellular organisms	24.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	24.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	17.27 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	15.45 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	4.55 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	2.73 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	2.73 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	4.55 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2.73 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.73 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	4.55 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	2.73 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.73 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
unclassified Opitutaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae	4.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.73 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	1.82 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	75.45 %
Opitutaceae bacterium TSB47	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	4.55 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2.73 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1.82 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105865774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	1863	Open in IMG/M
3300001213\|JGIcombinedJ13530_101340694	Not Available	1485	Open in IMG/M
3300001213\|JGIcombinedJ13530_105340499	Not Available	843	Open in IMG/M
3300001213\|JGIcombinedJ13530_106097674	Not Available	653	Open in IMG/M
3300001213\|JGIcombinedJ13530_106613822	Not Available	908	Open in IMG/M
3300005436\|Ga0070713_100086420	All Organisms → cellular organisms → Bacteria	2689	Open in IMG/M
3300005439\|Ga0070711_100219110	Not Available	1478	Open in IMG/M
3300005526\|Ga0073909_10213702	Not Available	840	Open in IMG/M
3300005529\|Ga0070741_10000236	All Organisms → cellular organisms → Bacteria	210410	Open in IMG/M
3300005531\|Ga0070738_10002582	All Organisms → cellular organisms → Bacteria	27179	Open in IMG/M
3300005537\|Ga0070730_10314302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1024	Open in IMG/M
3300005537\|Ga0070730_10401483	Not Available	887	Open in IMG/M
3300005538\|Ga0070731_10015829	All Organisms → cellular organisms → Bacteria	5342	Open in IMG/M
3300005538\|Ga0070731_10995464	Not Available	555	Open in IMG/M
3300005575\|Ga0066702_10499315	Not Available	741	Open in IMG/M
3300005614\|Ga0068856_102254542	Not Available	553	Open in IMG/M
3300005713\|Ga0066905_101691044	Not Available	581	Open in IMG/M
3300006046\|Ga0066652_101139771	Not Available	739	Open in IMG/M
3300006237\|Ga0097621_101901289	Not Available	568	Open in IMG/M
3300006358\|Ga0068871_100939605	Not Available	803	Open in IMG/M
3300006358\|Ga0068871_101831370	Not Available	576	Open in IMG/M
3300006854\|Ga0075425_102297771	Not Available	599	Open in IMG/M
3300006914\|Ga0075436_100757858	Not Available	721	Open in IMG/M
3300006938\|Ga0081245_1281516	Not Available	638	Open in IMG/M
3300009093\|Ga0105240_10022289	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	8401	Open in IMG/M
3300009177\|Ga0105248_12514303	Not Available	587	Open in IMG/M
3300009506\|Ga0118657_10008589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	26412	Open in IMG/M
3300009506\|Ga0118657_11046520	Not Available	994	Open in IMG/M
3300010048\|Ga0126373_11248316	Not Available	809	Open in IMG/M
3300010352\|Ga0116247_10758143	Not Available	723	Open in IMG/M
3300010361\|Ga0126378_11152213	Not Available	875	Open in IMG/M
3300010361\|Ga0126378_12444709	Not Available	597	Open in IMG/M
3300010366\|Ga0126379_13550058	Not Available	522	Open in IMG/M
3300010398\|Ga0126383_13309353	Not Available	526	Open in IMG/M
3300012361\|Ga0137360_11330769	Not Available	620	Open in IMG/M
3300012361\|Ga0137360_11789449	Not Available	520	Open in IMG/M
3300012917\|Ga0137395_10089451	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2026	Open in IMG/M
3300012930\|Ga0137407_11237449	Not Available	709	Open in IMG/M
3300012931\|Ga0153915_11771064	Not Available	723	Open in IMG/M
3300012971\|Ga0126369_10697418	Not Available	1092	Open in IMG/M
3300013296\|Ga0157374_10561788	Not Available	1149	Open in IMG/M
3300013296\|Ga0157374_12191960	Not Available	579	Open in IMG/M
3300014161\|Ga0181529_10100646	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	1846	Open in IMG/M
3300014199\|Ga0181535_10626593	Not Available	615	Open in IMG/M
3300016270\|Ga0182036_10720379	Not Available	808	Open in IMG/M
3300016357\|Ga0182032_10361982	Not Available	1163	Open in IMG/M
3300016371\|Ga0182034_10488225	Not Available	1025	Open in IMG/M
3300016371\|Ga0182034_11607611	Not Available	571	Open in IMG/M
3300016387\|Ga0182040_11944093	Not Available	505	Open in IMG/M
3300016422\|Ga0182039_10755165	Not Available	861	Open in IMG/M
3300016445\|Ga0182038_11805200	Not Available	552	Open in IMG/M
3300017973\|Ga0187780_11081010	Not Available	586	Open in IMG/M
3300017988\|Ga0181520_11056775	Not Available	535	Open in IMG/M
3300021170\|Ga0210400_10116236	All Organisms → cellular organisms → Bacteria → PVC group	2131	Open in IMG/M
3300021180\|Ga0210396_10270840	Not Available	1507	Open in IMG/M
3300021479\|Ga0210410_11060455	Not Available	700	Open in IMG/M
3300021559\|Ga0210409_10142868	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2194	Open in IMG/M
3300024186\|Ga0247688_1014427	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	1128	Open in IMG/M
3300024219\|Ga0247665_1011343	Not Available	1023	Open in IMG/M
3300024249\|Ga0247676_1049134	Not Available	687	Open in IMG/M
3300025913\|Ga0207695_10067901	All Organisms → cellular organisms → Bacteria	3655	Open in IMG/M
3300027821\|Ga0209811_10142198	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	885	Open in IMG/M
3300027857\|Ga0209166_10291690	Not Available	859	Open in IMG/M
3300027857\|Ga0209166_10351853	Not Available	769	Open in IMG/M
3300027869\|Ga0209579_10062257	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1976	Open in IMG/M
3300027902\|Ga0209048_10861037	Not Available	587	Open in IMG/M
3300027965\|Ga0209062_1007553	All Organisms → cellular organisms → Bacteria	9328	Open in IMG/M
3300028146\|Ga0247682_1079404	Not Available	603	Open in IMG/M
3300028281\|Ga0247689_1045594	Not Available	612	Open in IMG/M
3300028800\|Ga0265338_10051898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3687	Open in IMG/M
3300031231\|Ga0170824_116025515	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1880	Open in IMG/M
3300031573\|Ga0310915_11111213	Not Available	549	Open in IMG/M
3300031713\|Ga0318496_10678104	Not Available	569	Open in IMG/M
3300031719\|Ga0306917_10238520	Not Available	1390	Open in IMG/M
3300031823\|Ga0307478_11765803	Not Available	509	Open in IMG/M
3300031890\|Ga0306925_10701972	Not Available	1059	Open in IMG/M
3300031902\|Ga0302322_103283437	Not Available	555	Open in IMG/M
3300031910\|Ga0306923_10197705	All Organisms → cellular organisms → Bacteria → PVC group	2298	Open in IMG/M
3300031910\|Ga0306923_12266004	Not Available	543	Open in IMG/M
3300031938\|Ga0308175_100560861	Not Available	1224	Open in IMG/M
3300031938\|Ga0308175_102346097	Not Available	598	Open in IMG/M
3300031939\|Ga0308174_11584248	Not Available	562	Open in IMG/M
3300032001\|Ga0306922_10475958	Not Available	1333	Open in IMG/M
3300032035\|Ga0310911_10457971	Not Available	739	Open in IMG/M
3300032074\|Ga0308173_10511625	Not Available	1077	Open in IMG/M
3300032089\|Ga0318525_10728872	Not Available	504	Open in IMG/M
3300032256\|Ga0315271_10006788	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	7451	Open in IMG/M
3300032256\|Ga0315271_10018349	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4736	Open in IMG/M
3300032770\|Ga0335085_10518276	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300032770\|Ga0335085_11454530	Not Available	716	Open in IMG/M
3300032770\|Ga0335085_11804164	Not Available	627	Open in IMG/M
3300032783\|Ga0335079_10057055	Not Available	4458	Open in IMG/M
3300032783\|Ga0335079_12289711	Not Available	513	Open in IMG/M
3300032805\|Ga0335078_12409921	Not Available	547	Open in IMG/M
3300032828\|Ga0335080_10554111	Not Available	1215	Open in IMG/M
3300032828\|Ga0335080_11527133	Not Available	660	Open in IMG/M
3300032829\|Ga0335070_11925723	Not Available	533	Open in IMG/M
3300032829\|Ga0335070_12096843	Not Available	507	Open in IMG/M
3300032892\|Ga0335081_12485632	Not Available	535	Open in IMG/M
3300032893\|Ga0335069_10514709	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	1386	Open in IMG/M
3300032893\|Ga0335069_11682890	Not Available	677	Open in IMG/M
3300032897\|Ga0335071_10210801	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1897	Open in IMG/M
3300032897\|Ga0335071_10587844	Not Available	1065	Open in IMG/M
3300032955\|Ga0335076_11032600	Not Available	705	Open in IMG/M
3300033004\|Ga0335084_10732380	Not Available	1007	Open in IMG/M
3300033289\|Ga0310914_10372388	Not Available	1292	Open in IMG/M
3300033412\|Ga0310810_10018167	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	8432	Open in IMG/M
3300033480\|Ga0316620_10596449	Not Available	1037	Open in IMG/M
3300033513\|Ga0316628_100459298	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium TSB47	1634	Open in IMG/M
3300033557\|Ga0316617_102898097	Not Available	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.18%
Host-Associated	Host-Associated	10.91%
Engineered	Engineered	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.36%
Aquatic	Environmental → Aquatic	11.82%
Plants	Host-Associated → Plants	10.91%
Wastewater	Engineered → Wastewater	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.27%
Freshwater	Environmental → Aquatic → Freshwater	6.36%
Marine	Environmental → Aquatic → Marine	5.45%
Roots	Host-Associated → Plants → Roots	2.73%
Peat	Environmental → Terrestrial → Peat	0.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.91%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	19.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.36%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.64%
Loam	Environmental → Terrestrial → Soil → Loam	2.73%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.73%
Lake	Environmental → Aquatic → Freshwater → Lake	1.82%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.91%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.91%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	19.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.36%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	5.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.73%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.73%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.82%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.91%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.91%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.91%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	18.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	10.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.45%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	3.64%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.64%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.73%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.82%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.82%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.91%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.91%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.91%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.91%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006938	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A001 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010352	AD_JPHWca	Engineered	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028281	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK30	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1058657741	3300000364	Soil	MDPIPDIKRLLLRALFRLKDIPWPDALLDDVARQGVLPRPLQSDINQAKRELECAGYIQGSRDELDNLLTWTLTEKGRHKAKQLG*
JGIcombinedJ13530_1013406942	3300001213	Wetland	MNPVSDIKRLLLRALGRLQSTPCPDALVDEAARRGVLPRPLQSDINQAKRELEAAGYIQGARDEFDDSLTWTLTDKGCHKARQLG*
JGIcombinedJ13530_1053404992	3300001213	Wetland	MNPIGEIKRFLLRALGRLDGLPWPDALLDEAARRGVMPCPLQSDINEAKRELEAAGYLQGARDELDGTPTWTLTEKGHHKAKSLG*
JGIcombinedJ13530_1060976741	3300001213	Wetland	MNPISDIKRFVLRAMHRLNGLPWPDALLDDAVRQAVLPRPLQSDINQAKRELETAGFIQGNRDELDDLLTWTLTGKGHHKAKELE*
JGIcombinedJ13530_1066138222	3300001213	Wetland	MDPLTEIKHFLLRALLRLRGIPWHQEALAEAARSALAPQPLLSDLRQACRELEAGGFIQGLRDELDGSVSWTLTEKGRHKALQLG*
Ga0070713_1000864203	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNPIGDIKRFLLRALFRLNGVPWPDALLDAAARQAVLPRPLQSDINQAKRELEHAGYVQGSRDDLDDLLSWTLTEKGRHKAKELG*
Ga0070711_1002191103	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNPIGDIKRFLLRALGRLDGVPWPDALLDEAARQGLMPRPLQSDINQAKRELESAGYVQGARDELDDQLSWTLTDKGRHKAKQIG*
Ga0073909_102137022	3300005526	Surface Soil	MNPISDIKRFLMRALWRLNGLPWPDALMDEAARQALVPRPLQSDINQAKRELESTGFIQGNRDELDELVTWTLTDKGRHKAKQLG*
Ga0070741_100002362	3300005529	Surface Soil	MNPISDLKRFVLRALLRLDGIPWPDALLDDAARQGVLPRPLQSDINQAKRELEQAGYVQADPDDLDGMLTWTLTEKGRHKAKQLG*
Ga0070738_100025828	3300005531	Surface Soil	MNPIGEIKRFVLRALLRLNGLPWPDALLDDAVRHGLMPRPLQSDINQAKRELEAAGYTQGSRDDLDGSITWTLTDKGQHKARQLD*
Ga0070730_103143023	3300005537	Surface Soil	MNPISDLKRFVLRALIRLDGIPYPDSLLDDALRQAVLPRPLQSDINQAKRELERAGFLQGDRDELDGLLTWTLTDKGRHKARQLG*
Ga0070730_104014832	3300005537	Surface Soil	MTAISDIKRFLLRALGRAHGMPWPDALLDEAARQGIMPRPLQSDINQAKRELETAGYIQGARDELDDLLTWTLTDKGHHKARQLG*
Ga0070731_100158294	3300005538	Surface Soil	MNPIADIKRFVLRALGRLNGVPWPDLLLDDAARQGVVPRPLQSDINQAKRELEAAGYILGRRDEFDEVLTWTLTDKGRHKAKQIS*
Ga0070731_109954641	3300005538	Surface Soil	MNPLSDIKRFVLRALFRLNGVPWPDPMLDEAARQGLLPRPLQSDLNQAKRELERAGYIQGSRDDLDDLLTWT
Ga0066702_104993152	3300005575	Soil	VNTLGEIKRLILRALVRLRGIPFPDDLLDDAVRNGFVPRLLQSDLQQSKRELERDGFLQAARDDLDGRITWTLTEKGRHKAQEIESL*
Ga0068856_1022545422	3300005614	Corn Rhizosphere	MNPIGDIKRFLLRALFRLNGVPWPDALLDAAARQAVLPRPLQSDINQAKRELEHAGYVQGSRDELDDLLSWTLTEKGRHKAKELG*
Ga0066905_1016910442	3300005713	Tropical Forest Soil	MNPIGEIKRFLLRALGRANGLPWPEALLDEAARQGLRPRPLQSDINQAKRELETTGYIQGNQDELDGLLSWTLTDKGRHKARQLG*
Ga0066652_1011397711	3300006046	Soil	MNPIGEIKRFVLRALGRLHGAPWPDALLDEAVRRAVLPHPLQSDINQAKRELENGGYVQASRDELDDLLSWTLTEKGRHKAKE
Ga0097621_1019012891	3300006237	Miscanthus Rhizosphere	MNPISDIKRFLLRALLRLDEIPWPDALLDDAARRGVFPPPLQSDVNQAKRELEAAGYLQGDRDELDGLLSWTLTAKGRHKA
Ga0068871_1009396051	3300006358	Miscanthus Rhizosphere	MNPISDIKRFLLRALLRLDEIPWPDALLDDAARRGVFPPPLQSDVNQAKRELEAAGYLQGDRDELDGLLSWTLTAKG
Ga0068871_1018313702	3300006358	Miscanthus Rhizosphere	MNPIGDIKRFLLRALFRLNGVPWPDALLDEAARQAVLPRPLQSDINQAKRELEHAGYVQGSRDDLDDLLS
Ga0075425_1022977711	3300006854	Populus Rhizosphere	MNPIGEIKRFLLRVLWRANGLPWPDALLDEAARQGFMPRPLQSDINQAKRELESAGYIQGARDELDDLLTWTLTDKGRHKAQQLG*
Ga0075436_1007578581	3300006914	Populus Rhizosphere	MNPIGDIKRFLLRALGRAHGMPWPDALLDEAARQGIMTRPLQRHVHQAKRELETAGYIRGAHDGLDGLLNWTLT
Ga0081245_12815161	3300006938	Tropical Rainforest Soil	MNPISDIKRFLMRALWRLNGLPWPDALMDEAARQALVPRPLQSDINQAKRELEAAGFIQGNRDELDELVTWTLTDKGRHKAKQLG*
Ga0105240_100222893	3300009093	Corn Rhizosphere	MNPIGEIKRFLIRASSRLNGLPWPDPLLDEAVRQGLVPRPLQSDINDAKRELETTGYLQGNRDDLDGQITWTLTDKGRHKARQLG*
Ga0105248_125143031	3300009177	Switchgrass Rhizosphere	MNPVSDIKRFLLRALGRLRGIPWPDELADETVRQAIVPRPLQSDINQAKRELERTGFVQATRDELDGQITWTLTEKGRHKAQELESR*
Ga0118657_1000858918	3300009506	Mangrove Sediment	MNPLSNIKRFLLRALLRLNGIPWPDALLDEAARHNVIPQPLQSDINQAKRELEAAGYIQGCRDDLDGLLSWTLTEKGRHKAAQLG*
Ga0118657_110465202	3300009506	Mangrove Sediment	MNPLGSIKRFVLRALLRLNGLPWPDPLLDEAARQALCPRPLQSDINQAKRELERAGFLQGARDELDDTVTWTLTDKGRHKAREIEANH*
Ga0126373_112483161	3300010048	Tropical Forest Soil	PISDIKRFVLRALFRLEGLPYPNTLLDEAVRQAVLPRPLQSDINQAKRELERAGYLQGDRDELDGLLTWTLTDKGRHKARQLS*
Ga0116247_107581432	3300010352	Anaerobic Digestor Sludge	MNNPISDLKRFLLRAMHRLDGLPWPDELLDEAAQQAVLPSPLRSDIHQAKRELESGGYIQGCRDELDGRVTWTLTDKGRHKAQQLG*
Ga0126378_111522132	3300010361	Tropical Forest Soil	VNPVNDTKRFVLRALWRLNNVPWADGLLDEAIKQGVLPRPLQSEIAQAKRELETAGYIQGHRDDLDGMLTWTLTEKGRHKAKELG*
Ga0126378_124447091	3300010361	Tropical Forest Soil	NPIGDIKRFVLRALFRLEGLPYPDSLLDDAVRQAVLPRPLQSDINQAKRELERAGYLQGEHDELDGKLTWMLTDKGRHKARQLC*
Ga0126379_135500582	3300010366	Tropical Forest Soil	MNPISDIKRFLMRALWRLNGLPWPDALMDEAARQACVPRPLQSDINQAKRELEAAGFIQGNRDELDELLTWTLTDKGRHKAKQLG*
Ga0126383_133093532	3300010398	Tropical Forest Soil	MNPIGEIKRFLLRVLGRANGLPWPDALLDEAARQGVMPRPLQSDINQAKRELESAGYIQGARDELDDLLTWTLTDKGRHKAQQLG
Ga0137360_113307692	3300012361	Vadose Zone Soil	MNPIPDIKRFLLRALFRLKDIPWPDALLDDAVRQGVLPRPLQSDINEAKRELESAGYIQGNQDELDGSLTWTLTDKGRHKAKQLG*
Ga0137360_117894491	3300012361	Vadose Zone Soil	MNPISDIKRFLLRALGRANSVPWPDALLDEAARQGIMPRPLQSDINQAKRELETGGYIQGTRDDLDDLLT
Ga0137395_100894513	3300012917	Vadose Zone Soil	MNPIPDIKRFLLRALARLKGIPWPDALLDEAARQALVPRPLQSDIQEAKRELEQAGYIQGNRDDLDQQLTWTLTDKGWHKARQLG*
Ga0137407_112374491	3300012930	Vadose Zone Soil	ARSRDRTPESMNPISDIKRFLLRAVFRFNGVPWPDALLDDAARQGLLPCPLQSDINQAKRDLERAGYIQGSRDELDDLLTWTLTDKGRHKAKQLG*
Ga0153915_117710642	3300012931	Freshwater Wetlands	MNPIGDIKRFTLRALARLDGLPWPDALLDEAARRGILPRPLQSDINQAKRELESAGYLQGRRDDLDGSLTWTLTDKGRHKAGELG*
Ga0126369_106974182	3300012971	Tropical Forest Soil	VNPVNDTKRFVLRALWRLNGVPWPDGLLDEAIKQGVLPRPLQSEIAQAKRELETSGYIQGHRDDLDGMLTWTLTEKGRHKAKELD*
Ga0157374_105617882	3300013296	Miscanthus Rhizosphere	MNPISDIKRFLLRALLRLDEIPWPDALLDDAARRGVFPPPLQSDVNQAKRELEAAGYLQGDRDELDGLLSWTLTAKGRHKARQLG*
Ga0157374_121919602	3300013296	Miscanthus Rhizosphere	MNPISDIKRFLLRALFRLGGVPWPDALLDEAVRQAVLPRPLQSDINQAKRELEHAGYVQASRDELDDLVSWTLTEKGRHKAKALG*
Ga0181529_101006464	3300014161	Bog	MNPQSDIKRFLLRAMLRLEGLPWPDPLLDEAIRQGVMPRPLQSDINQAKRELEAAGYLQGSRDDLDGLLTWTLTDKGRH
Ga0181535_106265931	3300014199	Bog	MNPQSDIKRFLLRALLRLEGLPWPDPLLDEAVRQGVMPRPLQSDINQAKRELEAAGYLQCSRDDLDGL
Ga0182036_107203792	3300016270	Soil	LMRALWRLNGLPWPNALMDEAARQALVPRPLQSDINQAKRELEAAGFIQGNRDELDELVTWTLTDKGGHKAKQLG
Ga0182032_103619823	3300016357	Soil	WRLNGLPWPDALMDEAARQALVPRPLQSDINQAKRELEAAGFIQGNRDELDELVTWTLTDKGGHKAKQLG
Ga0182034_104882252	3300016371	Soil	MNPISDIKRFLMRALWRLNGLPWPDALMDEAARQALVPRPHQSYINQAKRGLEAAGFIQGNRDELDELVTWTRTDKGGHKAKQLG
Ga0182034_116076111	3300016371	Soil	ALYRLNGVPWPDPLLDDAVRQAVVPRPLQSDINQAKRELEHAGYLQASRDDLDGLLSWTLTEKGRHKAKELG
Ga0182040_119440932	3300016387	Soil	MNPISDIKRFLLRALGRANGVPWPDALLDEAARQGIMPRPLQSDINQAKRELENAGYLQGARDELDDLLTWTLTEKGRHKARQLG
Ga0182039_107551652	3300016422	Soil	MNPIGDIKRFMLRALARLDGLPWPDGLLDEAARRGLLPRPLQSDLNQAKRELESAGYLQGQRDDLDGSLT
Ga0182038_118052001	3300016445	Soil	MNPVVDLKRFLLRALGRLNGLPWPDALMDEAARQALVPRPLQSDINQAKRELETAGFIQGCRDELDGLLTWTLTEKGRHKAR
Ga0187780_110810102	3300017973	Tropical Peatland	MNPVNDLKRFLLRAMLRLNGLPWPDALLDEAARQASVPRALQSDINQAKRELEKAGYILGSRDELDDLLTWTLTDKGRHKAKQLG
Ga0181520_110567751	3300017988	Bog	QFMNPQSDIKRFLLRAMLRLEGLPWPDPLLDEAIRQGVMPRPLQSDINQAKRELEAAGYLQGSRDDLDGLLTWTLTDKGRHKAKQLG
Ga0210400_101162363	3300021170	Soil	MNPLSDIKRFVLRALFRLNGVPWPDALLDDAARQSVMPRPLQSDINQAKRELETSGYIQGSRDELDDLLTWTLTDKGRHKAKQLG
Ga0210396_102708403	3300021180	Soil	MNPISDIKRFVLRALFRLKGVPWPDPLMDDAVRQGILPRPLQSDISQAKRELDAAGYMQGNRDDLDDLVTWTLTEKGSHKAKQLG
Ga0210410_110604552	3300021479	Soil	MNPLSDIKRFVLRALFRLNGVPWPDPLLDEAARQGLLPRPLQSDLNQAKRDLERAGYIQGSRDDLDDLLTWTLTEKGRHKAQQLG
Ga0210409_101428681	3300021559	Soil	MNPISDIKRFVLRALFRLDGVPWPDPLLDDAVRQGILPRPLQSDINQAKRELEAAGFLQGDRDDLDGLLTWTLTEKGRHKARQLG
Ga0247688_10144273	3300024186	Soil	MNHPISDIKRFLLRALRRTNGLPWPDALLDEAARQGVMPRPLQSDINQAKRELENAGYILGARDELDDLLTWTLTDKGR
Ga0247665_10113431	3300024219	Soil	MNHPISDIKRFLLRALRRTNGLPWPDALLDEAARQGVMPRPLQSDINQAKRELENAGYILGARDELDDLLTWTLTDKGRHK
Ga0247676_10491341	3300024249	Soil	RFLLRALGRLDGVPWPDALLDEAARQGLMPRPLQSDINQAKRELESAGYVQGARDELDDQLSWTLTDKGRHKAKQIG
Ga0207695_100679015	3300025913	Corn Rhizosphere	MNPIGEIKRFLIRASSRLNGLPWPDPLLDEAVRQGLVPRPLQSDINDAKRELETTGYLQGNRDDLDGQITWTLTDKGRHKARQLG
Ga0209811_101421981	3300027821	Surface Soil	MNPISDIKRFLMRALWRLNGLPWPDALMDEAARQALVPRPLQSDINQAKRELESTGFIQGNRDELDELVTWTLTDKGRHKAKQLG
Ga0209166_102916902	3300027857	Surface Soil	MTAISDIKRFLLRALGRAHGMPWPDALLDEAARQGIMPRPLQSDINQAKRELETAGYIQGARDELDDLLTWTLTDKGHHKARQLG
Ga0209166_103518531	3300027857	Surface Soil	MNPISDLKRFVLRALIRLDGIPYPDSLLDDALRQAVLPRPLQSDINQAKRELERAGFLQGDRDELDGLLTWTLTDKGRHKARQLG
Ga0209579_100622573	3300027869	Surface Soil	MNPIADIKRFVLRALGRLNGVPWPDLLLDDAARQGVVPRPLQSDINQAKRELEAAGYILGRRDEFDEVLTWTLTDKGRHKAKQIS
Ga0209048_108610372	3300027902	Freshwater Lake Sediment	MNPVSDIKRFVLRALLRLNGIPWPDELLEDAARQGIVPRPLQSDLNQAKRELERAGYIQGSRDELDERLSWTLTEKGRHKAKQIDASLLSVE
Ga0209062_10075538	3300027965	Surface Soil	MNPIGEIKRFVLRALLRLNGLPWPDALLDDAVRHGLMPRPLQSDINQAKRELEAAGYTQGSRDDLDGSITWTLTDKGQHKARQLD
Ga0247682_10794042	3300028146	Soil	MNPISDIKRFLMRALWRLNGLPWPDALMDEAVRQALVPRPLQSDINQAKRELETAGFIQGNRDELDELLTWTLTDKGRHKAKQLG
Ga0247689_10455941	3300028281	Soil	MNHPISDIKRFLLRALRRTNGLPWPDALLDEAARQGVMPRPLQSDINQAKRELENAGYILGARDELDDLLTWTLTDKGRHKARQLG
Ga0265338_100518984	3300028800	Rhizosphere	MNPISDIKRFALRALFRLKGVPWPDSLFDDAVRQGMVPRPLQSDINQAKRELETAGYILGNRDELDDLLTWSLTDKGRHKASQLG
Ga0170824_1160255153	3300031231	Forest Soil	MNPISDIKRFLLRALLRLDEIPWPDALLDDATRRGVFPAPLQSDVNQAKRELEAAGYLQGDRDEFDGLLSWTLTAKGRHKARQLG
Ga0310915_111112131	3300031573	Soil	ALGRLNGLPWPDALMDEAARQALVPRPLQSDINQAKRELETAGFIQGCRDELDGLLTWTLTEKGRHRARQLE
Ga0318496_106781041	3300031713	Soil	MNPIGDIKRFMLRALARLDGLPWPDGLLDEAARRGLLPRPLQSDLNQAKRELESAGYLQGQRDDLDGSLTWTLTDKGRHKAKQLG
Ga0306917_102385203	3300031719	Soil	MNPISDIKRFLMRALWRLNGLPWPDALMDEAARQALVPRPLQSDINQAKRELEAAGFIQGNRDELDELVTWTLTDKGGHKAKQLG
Ga0307478_117658032	3300031823	Hardwood Forest Soil	DIKRFVLRALFRLEGVPWPDPLLDDAVRQGILPRPLQSDTNQAKRELEAAGFLQGDRDDLDELLTWTLTEKGRHKAKQLG
Ga0306925_107019721	3300031890	Soil	MNPISDIKRFLLRALGRANGVPWPDALLDEAARQGIMPRPLQSDINQAKRELESAGYLHGARDELDDLLTWTLTEKGRHKARQLG
Ga0302322_1032834371	3300031902	Fen	MNPVSDIKRFLLRAFYRLEGVPWPDALMDDAARQGVVPRPLHSDIHQAKRELEAAGYIQGSRDELDDLLTWTLTDKGRHKAKQLG
Ga0306923_101977053	3300031910	Soil	MNPIGDIKRFLLRALYRLNGVPWPDPLLDDAVRQAVVPRPLQSDINQAKRELEHAGYLQASRDDLDGLLSWTLTEKGRHKAKELG
Ga0306923_122660041	3300031910	Soil	MPRNLIQFQSVMNPVVDLKRFLLRALGRLNGLPWPDALMDEAARQALVPRPLQSDINQAKRELETAGFIQGCRDELDGLLTWTLTEKGRHRARQLE
Ga0308175_1005608613	3300031938	Soil	MNPISDIKRFLLRALLRLDEIPWPDALLDDATRRGVFPPPLQSDVKQAKRELEAAGYLQGDRDELDGLLSWTLTAKGRHKARQLG
Ga0308175_1023460972	3300031938	Soil	MNPIGDIKRFVLRALFRLQAVPWPDELLEDAARQGIVPRPLQSDINQAKRELENAGYIQGSRDELDDLLTWTLTDKGRHKAKQLA
Ga0308174_115842482	3300031939	Soil	MNPISDIKRFVLRALLRLDEIPWPDALLDDAARRGVFPRPLQSDINQAKRELESTGYLQGDRDELDGLLSWTLTAKGRHKARQLG
Ga0306922_104759582	3300032001	Soil	MNPIGDIKRFLLRALYRLNGVPWPDPLLDDAVRQAVVPRPLQSDINQAKRELEHAGYLQASRDDLDGLLSWTLTEMGRHKAKELG
Ga0310911_104579711	3300032035	Soil	MNPISDIKRFLLRALGRANGVPWPDALLDEAARQGIMPRPLQSDLNQAKRELESAGYLHGARDELDDL
Ga0308173_105116252	3300032074	Soil	MNPISDIKRFLLRALLRLDEIPWPDALLDDAARRGVFPPPLQSDVNQAKRELEAAGYLQGDRDELDGLLSWTLTAKGRHKARQLG
Ga0318525_107288721	3300032089	Soil	MNPIGDIKRFLLRALYRLNGVPWPDPLLDDAVRQAVVPRPLQSDINQAKRELEHAGYLQASRDDLDGLLSWTLTEKGRHKAK
Ga0315271_100067883	3300032256	Sediment	MNPISDLKRFLLRALWRLDGIPWPDALADEAARQGVMPRPLHSDIQQAKRELEAAGYLQGQRDELDGLLTWTLTDKGRHKAKQLG
Ga0315271_100183493	3300032256	Sediment	MNPVPEIKRFLLRALARLKGIPWPDELLEESARQSLVPKPLLSDIREARRDLEAGGYLQGHRDEMDGAITWTLTAKGQHAARQLE
Ga0335085_105182761	3300032770	Soil	DRAPQSMNPLSEMKRFLLRALWRLNGLPWPDPLMDEAVRQGIIPRPLQSDISQVKRELEAAGYIQGERDDLDDLLTWTLTAKGRHKARQLG
Ga0335085_114545302	3300032770	Soil	MSPIGEIKRFLLRALSRAHGLPWPDALLDEAARQGVMPPPLHSDIHQAKRELETAGYIHGSRDELDDLLTWTLTEKGRHKAKQLG
Ga0335085_118041642	3300032770	Soil	MNPIPDLKRFVLRGLLRLNGLPWPDALLDDAAGQGLVPRPLQSDIHQAKRELEQAGYIQGSRDELDDLLTWTLTEKGRHKAKQLDWPRA
Ga0335079_100570555	3300032783	Soil	MNPIPEIKRFMLRALWRLEGTPWPDALLDEAVRRAVLPPPLQSEVNQAKRELEAAGYVQGSRDELDNSVTWTLTDKGRHKAQQIG
Ga0335079_122897112	3300032783	Soil	MSPIGEIKRFLLRALSRAHGLPWPDALLDEAARQGVMPPPLHSDIHQAKRELETAGYIHGSRDELDDLLTWTLTE
Ga0335078_124099212	3300032805	Soil	RALGRLNGLPWPDALLEEAARQAVAPRPLQSDIHQAKRELEAGGYIQGCRDELDGLLTWTLTDKGRHKARQLG
Ga0335080_105541113	3300032828	Soil	MNPISDIKRFLMRALWRLNGLPWPDALMDEAARQALVPRPLQSDINQAKRELEAAGFIQGNRDELDELVTWTLTDKGRHKAKQLG
Ga0335080_115271332	3300032828	Soil	PIPEIKRFMLRALWRLEGTPWPDALLDEAVRRAVLPPPLQSEVNQAKRELEAAGYVQGSRDELDNSVTWTLTDKGRHKAQQIG
Ga0335070_119257232	3300032829	Soil	MNPVSDIKRFIVRALGRLDGMPWPDVLLDEAVRQGVMPRPLQSDINQAKRELETAGYLQGSHDELDDQLTWMLTEKGRHKARQLG
Ga0335070_120968431	3300032829	Soil	RTSITMSPTSNIKRFVLRALGRLNGLPWPDALVDEAARQGIMPCPLQSDINEAKRELEMAGYIQGARDDVDDLLTWTLTDKGRHKARQLG
Ga0335081_124856322	3300032892	Soil	MNPISDLKRFVLRALWRLEGIPWPDELLDEAASRAIVPRPLQSDINQAKRELEHAGYVQGHRDELDGLLTWTLTEKGRHKARQLN
Ga0335069_105147093	3300032893	Soil	MNPIVQLKRFLLRALHRLNGLPWPDALMDEAAREALLPRPLQSDINQAKRELESAGYIQGCRDDLDGLLTWTLTEKGRHKAKQLE
Ga0335069_116828901	3300032893	Soil	KRFLLRALHRLNGLPWPDALLDDAVRQALVPSPLQSDIQQAKRELETGGFLQGSRDELDDQLTWTLTEKGRHKAKQLG
Ga0335071_102108012	3300032897	Soil	MNPIPDIKRFLLRALHRLNGLPWPDALLDDAVRQALVPSPLQSDIQQAKRELETGGFLQGSRDELDDQLTWTLTEKGRHKAKQLG
Ga0335071_105878441	3300032897	Soil	MNPISEIKRFVLRALWRLHGLPWPDALLDEAVRQALVPRPLQSDVEQAKRELESAGYVQGNRDDLDGEVSWTLTDKGRHKAKELG
Ga0335076_110326002	3300032955	Soil	MNPLPDIKRFILRALHRLNGLPWPDALTDDAVRQALVPRPLQSDINEAKRELESAGFIQGSRDELDGQVTWTLTEKGRHKAMQLG
Ga0335084_107323801	3300033004	Soil	MNPISDIKQYLMRALWRLNGLPWPDALMDEAVRQALVPRPLQSDINQAKRDLETAGFIQGNRDELDELLTWTLTEKGR
Ga0310914_103723882	3300033289	Soil	MYPIGDIKRFMLRALARLDGLPWPDGLLDEAARRGLLPRPLQSDLSQAKRELESAGYLQGQRDDLDGSLTWTLTDKGRHKAKQLG
Ga0310810_100181674	3300033412	Soil	MNHPISDIKRFLLRALGRTNGLPWPDALLDEAARQGVMPRPLQSDINQAKRELENAGYILGARDELDDLLTWTLTDKGCHKARQLG
Ga0316620_105964492	3300033480	Soil	MNPIGDIKRFTLRALARLDGLPWPDALLDEAARRGILPRPLQSDINQAKRELESAGYLQGRRDDLDGSLTWTLTDKGRHKAGELG
Ga0316628_1004592982	3300033513	Soil	MNPIGDIKRFTLRALARLDGLPWPDALLDEAARRGILPRPLQSDINQAKRELETAGYLQGRRDDLDGSLTWTLTDKGRHKAGELG
Ga0316617_1028980972	3300033557	Soil	MNPLSDLKRFLLRAMLRLNQLPWPDPLLDEAARQGVMPRPLQSDINQAKRELEAAGYIQGSRDELDDLLTWTLTDKGRHKARQLG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087340

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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