NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F087330

Metagenome Family F087330

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F087330
Family Type Metagenome
Number of Sequences 110
Average Sequence Length 59 residues
Representative Sequence MSKVSGKLCIKFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSIGEDDYVEVD
Number of Associated Samples 72
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 81.82 %
% of genes near scaffold ends (potentially truncated) 22.73 %
% of genes from short scaffolds (< 2000 bps) 85.45 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (31.818 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Strait → Unclassified → Seawater
(31.818 % of family members)
Environment Ontology (ENVO) Unclassified
(86.364 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(93.636 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 31.03%    β-sheet: 24.14%    Coil/Unstructured: 44.83%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 110 Family Scaffolds
PF00476DNA_pol_A 6.36
PF00436SSB 1.82
PF12705PDDEXK_1 1.82
PF01402RHH_1 0.91
PF05873Mt_ATP-synt_D 0.91
PF05565Sipho_Gp157 0.91

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 110 Family Scaffolds
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 6.36
COG0629Single-stranded DNA-binding proteinReplication, recombination and repair [L] 1.82
COG2965Primosomal replication protein NReplication, recombination and repair [L] 1.82


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms68.18 %
UnclassifiedrootN/A31.82 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001937|GOS2252_1020922Not Available1125Open in IMG/M
3300001967|GOS2242_1095962All Organisms → Viruses1668Open in IMG/M
3300002231|KVRMV2_100407022All Organisms → Viruses → Predicted Viral1115Open in IMG/M
3300002231|KVRMV2_101664522Not Available640Open in IMG/M
3300002482|JGI25127J35165_1047717All Organisms → Viruses935Open in IMG/M
3300002482|JGI25127J35165_1064089Not Available775Open in IMG/M
3300002482|JGI25127J35165_1099102All Organisms → Viruses588Open in IMG/M
3300002483|JGI25132J35274_1104489Not Available573Open in IMG/M
3300002483|JGI25132J35274_1125506Not Available512Open in IMG/M
3300004831|Ga0069134_172618Not Available731Open in IMG/M
3300005057|Ga0068511_1015046All Organisms → Viruses → Predicted Viral1073Open in IMG/M
3300006305|Ga0068468_1001096All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes7789Open in IMG/M
3300006735|Ga0098038_1029974All Organisms → Viruses → Predicted Viral2032Open in IMG/M
3300006735|Ga0098038_1048054All Organisms → Viruses → Predicted Viral1547Open in IMG/M
3300006735|Ga0098038_1105035All Organisms → Viruses971Open in IMG/M
3300006737|Ga0098037_1105646All Organisms → Viruses972Open in IMG/M
3300006737|Ga0098037_1150599Not Available781Open in IMG/M
3300006749|Ga0098042_1070945All Organisms → Viruses913Open in IMG/M
3300006749|Ga0098042_1137837All Organisms → Viruses602Open in IMG/M
3300006928|Ga0098041_1231638All Organisms → Viruses590Open in IMG/M
3300007963|Ga0110931_1069438All Organisms → Viruses → Predicted Viral1064Open in IMG/M
3300007963|Ga0110931_1171313Not Available650Open in IMG/M
3300009481|Ga0114932_10065275All Organisms → Viruses → Predicted Viral2305Open in IMG/M
3300009481|Ga0114932_10634193All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage MEDS1 group624Open in IMG/M
3300009593|Ga0115011_10003785All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes10265Open in IMG/M
3300009703|Ga0114933_10042837All Organisms → Viruses → Predicted Viral3357Open in IMG/M
3300009703|Ga0114933_10294906All Organisms → Viruses → Predicted Viral1077Open in IMG/M
3300009790|Ga0115012_10009156All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes5980Open in IMG/M
3300009790|Ga0115012_11570402Not Available568Open in IMG/M
3300012919|Ga0160422_10528519Not Available744Open in IMG/M
3300012919|Ga0160422_10645337Not Available673Open in IMG/M
3300012920|Ga0160423_10172491All Organisms → Viruses → Predicted Viral1512Open in IMG/M
3300012928|Ga0163110_10382232Not Available1051Open in IMG/M
3300017709|Ga0181387_1013009All Organisms → Viruses → Predicted Viral1607Open in IMG/M
3300017717|Ga0181404_1053970All Organisms → Viruses → Predicted Viral1009Open in IMG/M
3300017720|Ga0181383_1182456Not Available560Open in IMG/M
3300017721|Ga0181373_1062701All Organisms → Viruses668Open in IMG/M
3300017726|Ga0181381_1017226All Organisms → Viruses → Predicted Viral1663Open in IMG/M
3300017726|Ga0181381_1095362Not Available632Open in IMG/M
3300017728|Ga0181419_1126238Not Available621Open in IMG/M
3300017730|Ga0181417_1009666All Organisms → Viruses → Predicted Viral2499Open in IMG/M
3300017730|Ga0181417_1075391All Organisms → Viruses819Open in IMG/M
3300017738|Ga0181428_1079570Not Available765Open in IMG/M
3300017745|Ga0181427_1016481All Organisms → Viruses → Predicted Viral1849Open in IMG/M
3300017750|Ga0181405_1178029Not Available519Open in IMG/M
3300017750|Ga0181405_1180381Not Available515Open in IMG/M
3300017753|Ga0181407_1026427Not Available1578Open in IMG/M
3300017756|Ga0181382_1102112Not Available776Open in IMG/M
3300017756|Ga0181382_1152813Not Available601Open in IMG/M
3300017758|Ga0181409_1028092All Organisms → Viruses → Predicted Viral1796Open in IMG/M
3300017759|Ga0181414_1068923All Organisms → Viruses939Open in IMG/M
3300017760|Ga0181408_1101229All Organisms → Viruses750Open in IMG/M
3300017760|Ga0181408_1141706All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.620Open in IMG/M
3300017763|Ga0181410_1107253All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes806Open in IMG/M
3300017764|Ga0181385_1147068All Organisms → Viruses716Open in IMG/M
3300017764|Ga0181385_1182235Not Available634Open in IMG/M
3300017765|Ga0181413_1098886All Organisms → Viruses889Open in IMG/M
3300017765|Ga0181413_1210992Not Available578Open in IMG/M
3300017767|Ga0181406_1130125Not Available757Open in IMG/M
3300017768|Ga0187220_1127071All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes771Open in IMG/M
3300017769|Ga0187221_1082238All Organisms → Viruses999Open in IMG/M
3300017773|Ga0181386_1054956All Organisms → Viruses → Predicted Viral1275Open in IMG/M
3300017773|Ga0181386_1109185Not Available860Open in IMG/M
3300017786|Ga0181424_10121795All Organisms → Viruses → Predicted Viral1124Open in IMG/M
3300020381|Ga0211476_10005383All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes7101Open in IMG/M
3300020381|Ga0211476_10095556All Organisms → Viruses → Predicted Viral1121Open in IMG/M
3300020406|Ga0211668_10058966All Organisms → Viruses → Predicted Viral1689Open in IMG/M
3300020411|Ga0211587_10112355All Organisms → Viruses → Predicted Viral1175Open in IMG/M
3300020413|Ga0211516_10126567All Organisms → Viruses → Predicted Viral1205Open in IMG/M
3300020416|Ga0211644_10403720All Organisms → Viruses565Open in IMG/M
3300020429|Ga0211581_10038167All Organisms → Viruses → Predicted Viral1988Open in IMG/M
3300020430|Ga0211622_10378970All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.606Open in IMG/M
3300020430|Ga0211622_10403062Not Available586Open in IMG/M
3300020433|Ga0211565_10268173All Organisms → Viruses744Open in IMG/M
3300020436|Ga0211708_10202580All Organisms → Viruses798Open in IMG/M
3300020438|Ga0211576_10042014All Organisms → Viruses → Predicted Viral2650Open in IMG/M
3300020446|Ga0211574_10406267Not Available588Open in IMG/M
3300020450|Ga0211641_10460410All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.610Open in IMG/M
3300020451|Ga0211473_10143899All Organisms → Viruses → Predicted Viral1226Open in IMG/M
3300020451|Ga0211473_10618645Not Available547Open in IMG/M
3300020457|Ga0211643_10403032All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage MEDS1 group672Open in IMG/M
3300020469|Ga0211577_10078457All Organisms → Viruses → Predicted Viral2330Open in IMG/M
3300020470|Ga0211543_10593846Not Available520Open in IMG/M
3300022066|Ga0224902_100834All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Balneolaeota → Balneolia → Balneolales → Balneolaceae → Balneola → unclassified Balneola → Balneola sp.1464Open in IMG/M
3300022066|Ga0224902_101268All Organisms → Viruses → Predicted Viral1241Open in IMG/M
3300022074|Ga0224906_1035909All Organisms → Viruses → Predicted Viral1662Open in IMG/M
3300022074|Ga0224906_1087216Not Available937Open in IMG/M
3300022074|Ga0224906_1135871Not Available702Open in IMG/M
3300025086|Ga0208157_1003886All Organisms → cellular organisms → Bacteria → FCB group5706Open in IMG/M
3300025086|Ga0208157_1063482All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes959Open in IMG/M
3300025102|Ga0208666_1038510All Organisms → Viruses → Predicted Viral1402Open in IMG/M
3300025127|Ga0209348_1007257All Organisms → Viruses → Predicted Viral4621Open in IMG/M
3300025127|Ga0209348_1016809All Organisms → Viruses → Predicted Viral2803Open in IMG/M
3300025127|Ga0209348_1084346All Organisms → Viruses → Predicted Viral1009Open in IMG/M
3300025132|Ga0209232_1108884All Organisms → Viruses926Open in IMG/M
3300025132|Ga0209232_1110792All Organisms → Viruses916Open in IMG/M
3300025132|Ga0209232_1150539All Organisms → Viruses743Open in IMG/M
3300025132|Ga0209232_1194182Not Available623Open in IMG/M
3300025151|Ga0209645_1120038All Organisms → Viruses835Open in IMG/M
3300025151|Ga0209645_1195050Not Available601Open in IMG/M
3300027906|Ga0209404_10132399All Organisms → Viruses1502Open in IMG/M
3300029309|Ga0183683_1031064All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium933Open in IMG/M
3300029309|Ga0183683_1044015All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Mediterranean phage MEDS1 group675Open in IMG/M
3300029309|Ga0183683_1058967Not Available507Open in IMG/M
3300029319|Ga0183748_1013527All Organisms → Viruses3214Open in IMG/M
3300029319|Ga0183748_1033236All Organisms → Viruses → Predicted Viral1636Open in IMG/M
3300029319|Ga0183748_1103427All Organisms → Viruses648Open in IMG/M
3300029448|Ga0183755_1010261All Organisms → Viruses → Predicted Viral3730Open in IMG/M
3300029787|Ga0183757_1020093All Organisms → Viruses1613Open in IMG/M
3300031785|Ga0310343_10000439Not Available19751Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater31.82%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine30.00%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine24.55%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface3.64%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater1.82%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater1.82%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment1.82%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.91%
Marine WaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water0.91%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.91%
Surface SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Surface Seawater0.91%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001937Marine microbial communities from the Equatorial Pacific Ocean - GS037EnvironmentalOpen in IMG/M
3300001967Marine microbial communities from Devil's Crown, Floreana Island, Equador - GS027EnvironmentalOpen in IMG/M
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300002482Marine viral communities from the Pacific Ocean - ETNP_2_30EnvironmentalOpen in IMG/M
3300002483Marine viral communities from the Pacific Ocean - ETNP_6_30EnvironmentalOpen in IMG/M
3300004831Marine surface microbial communities from the North Atlantic Ocean - filtered matterEnvironmentalOpen in IMG/M
3300005057Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2umEnvironmentalOpen in IMG/M
3300006305Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0025mEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006749Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaGEnvironmentalOpen in IMG/M
3300006928Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaGEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300009790Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 MetagenomeEnvironmentalOpen in IMG/M
3300012919Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaGEnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017720Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23EnvironmentalOpen in IMG/M
3300017721Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaGEnvironmentalOpen in IMG/M
3300017726Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017730Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13EnvironmentalOpen in IMG/M
3300017738Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12EnvironmentalOpen in IMG/M
3300017745Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017756Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22EnvironmentalOpen in IMG/M
3300017758Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30EnvironmentalOpen in IMG/M
3300017759Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28EnvironmentalOpen in IMG/M
3300017760Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16EnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017764Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11EnvironmentalOpen in IMG/M
3300017765Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28EnvironmentalOpen in IMG/M
3300017767Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20EnvironmentalOpen in IMG/M
3300017768Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)EnvironmentalOpen in IMG/M
3300017769Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)EnvironmentalOpen in IMG/M
3300017773Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300020381Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)EnvironmentalOpen in IMG/M
3300020406Marine microbial communities from Tara Oceans - TARA_B100000886 (ERX555926-ERR599024)EnvironmentalOpen in IMG/M
3300020411Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)EnvironmentalOpen in IMG/M
3300020413Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)EnvironmentalOpen in IMG/M
3300020416Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)EnvironmentalOpen in IMG/M
3300020429Marine microbial communities from Tara Oceans - TARA_B100000614 (ERX556134-ERR599032)EnvironmentalOpen in IMG/M
3300020430Marine microbial communities from Tara Oceans - TARA_B100000683 (ERX556126-ERR599160)EnvironmentalOpen in IMG/M
3300020433Marine microbial communities from Tara Oceans - TARA_B100001989 (ERX556106-ERR599030)EnvironmentalOpen in IMG/M
3300020436Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020446Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)EnvironmentalOpen in IMG/M
3300020450Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)EnvironmentalOpen in IMG/M
3300020451Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)EnvironmentalOpen in IMG/M
3300020457Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300020470Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)EnvironmentalOpen in IMG/M
3300022066Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28 (v2)EnvironmentalOpen in IMG/M
3300022074Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)EnvironmentalOpen in IMG/M
3300025086Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025102Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025132Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)EnvironmentalOpen in IMG/M
3300025151Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027906Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300029309Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440EnvironmentalOpen in IMG/M
3300029319Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516EnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300029787Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172EnvironmentalOpen in IMG/M
3300031785Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MGEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GOS2252_102092223300001937MarineMTSDPKIKGRLCINFEVDTKKFNRDYVNFLYNVADGVIKDWDEYYEGIYLNIEEDSYIELDD*
GOS2242_109596223300001967MarineMAKVSGRLCIKFEVDTKKLEKRHVSYTNFLYNIAKAVLVDWDEYYEGIHLSIGEDDYVEVD*
KVRMV2_10040702243300002231Marine SedimentMSKVSGKLCIKFEVDTDKFKRDYINFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVDQ*
KVRMV2_10166452213300002231Marine SedimentMSKVSGRLCINFEVDTKKYKGDWPKYEYTTFLYNIAKGVVDDWDGYYEGVHISIGEDDYVEVDQ*
JGI25127J35165_104771733300002482MarineMTKVSGRLCINFEVDTEKCKRDHIAYLYNIARRVLQDWGDYDESITLSIGEDDYVEVD*
JGI25127J35165_106408923300002482MarineMSKVSGRLCIKFEVDTKKYSKDWPKYDYTTFLYNIAARVVDDWDGYYEGVHISIGEDDYVELD*
JGI25127J35165_109910213300002482MarineMSKVSGRLCIKFEVDTKKLEKRHVSYTNFLYNIAKAVLVDWDEYYEGIHLSIGEDDYVEVDL*
JGI25132J35274_110448923300002483MarineMTKVSGRLCINFEVDTEKCKRDHIAYLYNIARRVLQDWGGYDESITLSIGEDDYVEVD*
JGI25132J35274_112550623300002483MarineMSKVSGRLCIKFEVDTKKLEKRNVSYTNFLYNIAKAVLVDWDEYYEGIHLSIGEDDYVEVD*
Ga0069134_17261813300004831Surface SeawaterMSKVSGRLCINFEVDTDKFKRDYINFLYNIASRVLKDWNGYYEGIHLSLGEDDYVQLHHSTGE
Ga0068511_101504633300005057Marine WaterMSKVSGRLCIKFEVDTKKLEKRHVSYTTFLYNIAKAVLVDWDEYYEGIHLSIGEDDYVEVD*
Ga0068468_1001096173300006305MarineMSKVSGKLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVEVD*
Ga0098038_102997413300006735MarineMSKVSGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVEVD*
Ga0098038_104805433300006735MarineMSKVSGKLCIKFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVD*
Ga0098038_110503543300006735MarineMAKLSGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGKDDYVELD*
Ga0098037_110564623300006737MarineMAKLSGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVELD*
Ga0098037_115059913300006737MarineIKFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSIGEDDYVEVD*
Ga0098042_107094523300006749MarineMAKVSGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVELD*
Ga0098042_113783713300006749MarineGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVEVD*
Ga0098041_123163823300006928MarineGKLCIKFEVDTKKFKRDHINFLYNVAAGVIKDWDEYYEGIHLSIGEDDYVELD*
Ga0110931_106943833300007963MarineMAKLSGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVEVD*
Ga0110931_117131333300007963MarineMSKVSGKLCIKFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSIGEDDYVEVD*
Ga0114932_1006527553300009481Deep SubsurfaceMSKVSGKLCINFEVDTDKFKRDYINFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVTND
Ga0114932_1063419343300009481Deep SubsurfaceMTNDPKIKGRLCINFEVDTKKFNRDYVNFLYNVADGVIKDWDEYYEGIYLNIEEDSYI
Ga0115011_10003785153300009593MarineMSKVSGRLCIKFEVDTKKFKRDYVTFLYNIVKGVLADWDEYYEGIHLSIEEDGYVEED*
Ga0114933_1004283713300009703Deep SubsurfaceMSKVSGKLCINFEVDTDKFKRDYINFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVDQ*
Ga0114933_1029490643300009703Deep SubsurfaceMSKVSGKLCINFEVDTDKFKRDYINFLYNIASRVLKDWNGYYEGIHLSIGEDDYVEVD*
Ga0115012_1000915693300009790MarineMAKVSGRLCIKFEVDTKKFKRDYVTFLYNIVKGVLADWDEYYEGIHLSIEEDGYVEED*
Ga0115012_1157040223300009790MarineMKISGKLCINFEVDTKKFKRDYVNFLYNVAVGVLKDWDQYYEGIYLSIEEDGYVELDK*
Ga0160422_1052851933300012919SeawaterMAKVSGRLCIKFKVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVELD*
Ga0160422_1064533743300012919SeawaterKVSGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVELD*
Ga0160423_1017249153300012920Surface SeawaterMAKVSGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVEVD*
Ga0163110_1038223243300012928Surface SeawaterMAKVSGRLCIKFEVDTKKFKRDHTSFLYNVADGVIKDWDEYYEGIHLSIGEDDYVELD*
Ga0181387_101300943300017709SeawaterMSKVSGKLCINFEVDTDKFKRDYVNFLYNIASRVLKDWNGYYEGIHLSIGEDDYVEVTND
Ga0181404_105397023300017717SeawaterMSKVSGKLCINFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVTND
Ga0181383_118245623300017720SeawaterMPKVSGKLCIKFQVDTSKYKKDYISFLYNIASEVLKDWNGYYEGIHLDIEEDNYVELHHSTGELNND
Ga0181373_106270123300017721MarineMAKLSGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGKDDYVELD
Ga0181381_101722613300017726SeawaterMSKVSGKLCINFEVDTDKYKGDYVSFLYNIASRVLKDWNGYYEGIHLSIGEDDYVEVD
Ga0181381_109536233300017726SeawaterMPKVSGKLCINFEVNTDKFKRDYVNFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVTND
Ga0181419_112623833300017728SeawaterMSKVSGKLCINFEVDTDKFKRDYVNFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVTND
Ga0181417_100966663300017730SeawaterMSKVSGRLCINFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSIGEDDYVEVTND
Ga0181417_107539143300017730SeawaterMSKVSGKLCINFEVNTDKFKRDYVNFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVTND
Ga0181428_107957033300017738SeawaterMSKVSGKLCIKFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSIGEDDYVEVTND
Ga0181427_101648113300017745SeawaterMSKVSGKLCIKFEVDTDKFKRDYVNFLYNIASRVIKDWNGYYEGIYLSLGEDDYVEVTND
Ga0181405_117802913300017750SeawaterMSKVSGKLCIKFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSIGED
Ga0181405_118038113300017750SeawaterMSKVSGKLCINFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSIGED
Ga0181407_102642713300017753SeawaterMSKVSGKLCIKFEVDTDKFKRDYVNFLYNIASRVIKDWNGYYEGIHLSLGE
Ga0181382_110211233300017756SeawaterMSKVSGKLCINFEVDTDKYKGDYVSFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVD
Ga0181382_115281323300017756SeawaterMSKVSGRLCINFEVDTDKFKRDYVNFLYNIASRVLKDWNGYYEGIHLSIGEDDYVEVD
Ga0181409_102809213300017758SeawaterMSKVSGKLCIKFEVDTDKFKRDYINFLYNIASRVLKDWNGYYEGIHLSLGEDDYVE
Ga0181414_106892313300017759SeawaterRRKSMSKVSGKLCINFEVNTDKFKRDYVNFLYNIASRVLKDWNGYYEGIHLSIGEDDYVEVTND
Ga0181408_110122913300017760SeawaterKVSGKLCIKFEVDTDKFKRDYVNFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVTND
Ga0181408_114170633300017760SeawaterMSKVSGRLCINFEVDTDKFKRDYINFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVTND
Ga0181410_110725333300017763SeawaterMSKVSGKLCINFEVDTDKFKRDYVSFLYNIASRVIKDWNGYYEGIHLSLGEDDYVEVTND
Ga0181385_114706843300017764SeawaterKVSGRLCIKFKIDTKKYKGDWPKYEYTTFLYNIAKGVVDDWDGYYEGVHISIGEDDYVEL
Ga0181385_118223523300017764SeawaterMSKVSGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVEVY
Ga0181413_109888643300017765SeawaterMSKVSGKLCIKFEVDTDKFKRDYVNFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVTND
Ga0181413_121099233300017765SeawaterMSKVSGRLCINFEVDTDKFKRDYVNFLYNIASRVIKDWNGYYEGIHLSLGEDDYVEIEQ
Ga0181406_113012533300017767SeawaterMSKVSGKLCINFEVNTDKFKRDYVNFLYNIASRVLKDWNGYYEGIHLSIGEDDYVEVTND
Ga0187220_112707133300017768SeawaterMSKVSGKLCINFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLDIEEDNYVELHHSTGELNND
Ga0187221_108223853300017769SeawaterMSKVSGKLCINFEVDTDKYKGDYVSFLYNIASRVLKDWNGYYEGIHLDIEEDNYVELHHSTGELNND
Ga0181386_105495633300017773SeawaterMSKVSGKLCINFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSIGEDDYVEVTND
Ga0181386_110918513300017773SeawaterMSKVSGKLCINFEVDTDKFKRDYVNFLYNIASRVLKDWNGYYEGIHLSLGEDDY
Ga0181424_1012179533300017786SeawaterMSKVSGRLCINFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSL
Ga0211476_1000538373300020381MarineMSKVSGKLCINFEVDTDKFKRDYINFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVDQ
Ga0211476_1009555633300020381MarineMSKVSGKLCINFEVDTDKFKRDYINFLYNIASRVLKDWNGYYEGIHLSIGEDDYVEVD
Ga0211668_1005896623300020406MarineMAKVSGRLCIKFEVDTKKFKRDHIRFLYNVADGVIKDWDEYYEGIHLSIGEDDYVEVD
Ga0211587_1011235553300020411MarineMSKVSGRLCINFEVDTKKFKRDYVNFLYNIAKAVLEDWDEYYEGIYLSIGEDDYVEVD
Ga0211516_1012656733300020413MarineMSKVSGRLCINFEVDTKKYKGDWPKYEYTTFLYNIAKGVVDDWDGYYEGVHISIGEDDYVELD
Ga0211644_1040372013300020416MarineKVSGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVELD
Ga0211581_1003816763300020429MarineMKIKGKLCINFEIDTNKFKRDYVNFLYNVADGVIKDWDGYYEGINLSIGEDYVEADND
Ga0211622_1037897023300020430MarineMTNDPKIKGRLCINFEVDTNKFNRDYVNFLYNVADGVIKDWDEYYEGIYLNIEEDSYIELDD
Ga0211622_1040306223300020430MarineMAKVSGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVEVD
Ga0211565_1026817343300020433MarineRSLKMTKVSGRLCIKFEVDTKKFKRDHIRFLYNVADGVIKDWDEYYEGIHLSIGEDDYVEVD
Ga0211708_1020258043300020436MarineMSKVSGRLCIKFEVDTKKFKRDHIRFLYNVADGVIKDWDEYYEGIHLSIGEDDYVEVD
Ga0211576_1004201423300020438MarineMSKVSGKLCIKFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVTND
Ga0211574_1040626713300020446MarineVQTKYENSLPKMKIKGKLCINFEIDTNKFKRDYVNFLYNVADGVIKDWNEYYEGIHLSIGEDYVEADND
Ga0211641_1046041023300020450MarineMTNNPKIKGRLCINFEVDTKKFKRDYVNFLYNVADGVIKDWDEYYEGIYLNIEGDSYIELDD
Ga0211473_1014389913300020451MarineSKVSGRLCINFEVDTDKFKRDYINFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVTND
Ga0211473_1061864523300020451MarineMSKVSGRLCINFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVELD
Ga0211643_1040303223300020457MarineMAKVSGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVELD
Ga0211577_1007845743300020469MarineMSKVSGKLCIKFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSIGEDDYVEVD
Ga0211543_1059384633300020470MarineNMSKISGRLCIKFEVDTKKLEKRHVSYTTFLYNIAKAVLVDWDEYYEGIHLSIGEDDYVEVD
Ga0224902_10083413300022066SeawaterCINFEVNTDKFKRDYVNFLYNIASRVLKDWNGYYEGIHLSIGEDDYVEVTND
Ga0224902_10126833300022066SeawaterMSKVSGRLCINFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVTND
Ga0224906_103590953300022074SeawaterMSKVSGRLCINFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLS
Ga0224906_108721643300022074SeawaterMSKVSGRLCIKFEIDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVD
Ga0224906_113587133300022074SeawaterMSKVSGKLCIKFEVDTDKFKRDYVNFLYNIASRVIKDWNGYYEGIHLSLGEDDYVEVTND
Ga0208157_100388693300025086MarineMKLLKLRSLKMAKLSGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVELD
Ga0208157_106348223300025086MarineMSKVSGKLCIKFEVDTDKFKRDYVSFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVD
Ga0208666_103851043300025102MarineMSKVSGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVELD
Ga0209348_100725783300025127MarineMSKVSGRLCIKFEVDTKKYSKDWPKYDYTTFLYNIAARVVDDWDGYYEGVHISIGEDDYVELD
Ga0209348_101680963300025127MarineMSKVSGRLCIKFEVDTKKLEKRNVSYTNFLYNIAKAVLVDWDEYYEGIHLSIGEDDYVEV
Ga0209348_108434633300025127MarineMSKVSGRLCIKFEVDTKKLEKRHVSYTNFLYNIAKAVLVDWDEYYEGIHLSIGEDDYVEVDL
Ga0209232_110888413300025132MarineMKSLKLRRKIMSKVSGRLCIKFEVDTKKYSKDWPKYDYTTFLYNIAARVVDDWDGYYEGVHISIGEDDYVELD
Ga0209232_111079223300025132MarineMSKVSGRLCINFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVEVD
Ga0209232_115053943300025132MarineMSKVSGRLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVEVDL
Ga0209232_119418233300025132MarineMSKVSGRLCINFEVDTDKFKRDYVNFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVTND
Ga0209645_112003853300025151MarineMKLMKLQRKIMSKVSGRLCIKFEVDTKKLEKRHVSYTNFLYNIAKAVLVDWDEYYEGIHLSIGEDDYVEVD
Ga0209645_119505023300025151MarineMTKVSGRLCINFEVDTEKCKRDHIAYLYNIARRVLQDWGGYDESITLSIGEDDYVEVD
Ga0209404_1013239923300027906MarineMSKVSGRLCIKFEVDTKKFKRDYVTFLYNIVKGVLADWDEYYEGIHLSIEEDGYVEED
Ga0183683_103106433300029309MarineMKIKGKLCINFEIDTNKFKRDYVNFLYNVANGVIKDWDEYYEGINLSIQEDYVEID
Ga0183683_104401523300029309MarineMTNNPKIKGRLCINFEVDTKKFKRDYVNFLYNVADGVIKDWDEYYEGIYLNIEEDSYIELDD
Ga0183683_105896713300029309MarineMKIKGKLCINFEIDTNKFKRDYVNFLYNVADGVIKDWDEYYEGIYLSIGEDYVEA
Ga0183748_101352783300029319MarineMSKVSGRLCIKFEVDTKKFKRDYVNFLYNIAKAVLVDWDEYYEGIHLSIGEDDYVEVDS
Ga0183748_103323663300029319MarineMSKVSGRLCINFEVDTEKCKRDHIAYLYNIARRVLQDWGDYDESITLSIGEDDYVEVD
Ga0183748_110342733300029319MarineMSKVSGKLCIKFEVDTKKLEKRHVSYTTFLYNIAKAVLVDWDEYYEGIHLSIGEDDYVEV
Ga0183755_101026173300029448MarineMSKVSGKLCIKFEVDTDKFKRDYINFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVDQ
Ga0183757_102009313300029787MarineRRRIMSKVSGRLCINFEVDTDKFKRDYINFLYNIASRVLKDWNGYYEGIHLSLGEDDYVEVDQ
Ga0310343_10000439213300031785SeawaterMSKVSGKLCIKFEVDTKKFKRDHISFLYNVADGVIKDWDEYYEGIHLSIGEDDYVEVD


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.