Metagenome / Metatranscriptome Family F087283

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F087283
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	57 residues
Representative Sequence	AWTLREGQPYNADYPKKFLDDTRDLVPRGVQWAVSIHETPDAKDKTVDVEIRFKQQ
Number of Associated Samples	100
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	96.36 %
% of genes from short scaffolds (< 2000 bps)	90.91 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (69.091 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (16.364 % of family members)
Environment Ontology (ENVO)	Unclassified (43.636 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.273 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.29% β-sheet: 23.81% Coil/Unstructured: 61.90%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01435	Peptidase_M48	14.55
PF00266	Aminotran_5	1.82
PF02423	OCD_Mu_crystall	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.09 %
Unclassified	root	N/A	30.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.09 %
Unclassified	root	N/A	30.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.09 %
Unclassified	root	N/A	30.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	60.91 %
Unclassified	root	N/A	30.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	43.64 %
Unclassified	root	N/A	30.91 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.18 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.64 %
Unclassified	root	N/A	30.91 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.18 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.64 %
Unclassified	root	N/A	30.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.18 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.64 %
Unclassified	root	N/A	30.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.18 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.64 %
Unclassified	root	N/A	30.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.18 %
unclassified Anaerolineaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	43.64 %
Unclassified	root	N/A	30.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.18 %
Anaerolineaceae bacterium 4572_32.1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium 4572_32.1	0.91 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10633717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300001661\|JGI12053J15887_10424533	Not Available	638	Open in IMG/M
3300004080\|Ga0062385_10140391	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1234	Open in IMG/M
3300004082\|Ga0062384_100090966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1608	Open in IMG/M
3300005602\|Ga0070762_10164924	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300005712\|Ga0070764_10605121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300006354\|Ga0075021_10495405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium 4572_32.1	774	Open in IMG/M
3300006800\|Ga0066660_11403163	Not Available	547	Open in IMG/M
3300009143\|Ga0099792_11048944	Not Available	547	Open in IMG/M
3300009518\|Ga0116128_1088993	Not Available	922	Open in IMG/M
3300009521\|Ga0116222_1529516	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300009552\|Ga0116138_1061888	Not Available	1060	Open in IMG/M
3300009618\|Ga0116127_1140300	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300009621\|Ga0116116_1117817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300009623\|Ga0116133_1012851	All Organisms → cellular organisms → Bacteria → Acidobacteria	2076	Open in IMG/M
3300009624\|Ga0116105_1248235	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300009634\|Ga0116124_1140326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300009634\|Ga0116124_1144149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300009634\|Ga0116124_1169646	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300009641\|Ga0116120_1267904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300009645\|Ga0116106_1157283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300009665\|Ga0116135_1327297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300010341\|Ga0074045_10142928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1630	Open in IMG/M
3300010379\|Ga0136449_101717135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300010379\|Ga0136449_104126848	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300011269\|Ga0137392_10788028	Not Available	785	Open in IMG/M
3300012200\|Ga0137382_10993058	Not Available	603	Open in IMG/M
3300012202\|Ga0137363_11158086	Not Available	658	Open in IMG/M
3300012361\|Ga0137360_11588996	Not Available	559	Open in IMG/M
3300012363\|Ga0137390_12011818	Not Available	503	Open in IMG/M
3300014155\|Ga0181524_10448410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300014159\|Ga0181530_10476459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300014159\|Ga0181530_10641923	Not Available	516	Open in IMG/M
3300014491\|Ga0182014_10262400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300014502\|Ga0182021_10771570	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1154	Open in IMG/M
3300014839\|Ga0182027_10549340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1252	Open in IMG/M
3300015193\|Ga0167668_1061885	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300015241\|Ga0137418_10823297	Not Available	693	Open in IMG/M
3300016702\|Ga0181511_1238859	All Organisms → cellular organisms → Bacteria	3095	Open in IMG/M
3300016730\|Ga0181515_1139766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300017929\|Ga0187849_1177899	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300017931\|Ga0187877_1192326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300017933\|Ga0187801_10057712	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300017972\|Ga0187781_11038591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300017973\|Ga0187780_10507750	Not Available	861	Open in IMG/M
3300018007\|Ga0187805_10237551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300018008\|Ga0187888_1113989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1139	Open in IMG/M
3300018009\|Ga0187884_10374997	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300018012\|Ga0187810_10111355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1081	Open in IMG/M
3300018012\|Ga0187810_10314278	Not Available	649	Open in IMG/M
3300018020\|Ga0187861_10135896	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1148	Open in IMG/M
3300018026\|Ga0187857_10159366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1069	Open in IMG/M
3300018026\|Ga0187857_10181853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	987	Open in IMG/M
3300018026\|Ga0187857_10480153	Not Available	558	Open in IMG/M
3300018030\|Ga0187869_10125718	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1283	Open in IMG/M
3300018033\|Ga0187867_10377047	Not Available	787	Open in IMG/M
3300018037\|Ga0187883_10166392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1133	Open in IMG/M
3300018040\|Ga0187862_10909398	Not Available	502	Open in IMG/M
3300018044\|Ga0187890_10502058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300019082\|Ga0187852_1129483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1086	Open in IMG/M
3300019082\|Ga0187852_1188997	Not Available	855	Open in IMG/M
3300019787\|Ga0182031_1264452	All Organisms → cellular organisms → Bacteria → Acidobacteria	2550	Open in IMG/M
3300020199\|Ga0179592_10265328	Not Available	768	Open in IMG/M
3300021086\|Ga0179596_10398960	Not Available	694	Open in IMG/M
3300021406\|Ga0210386_11127379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300021407\|Ga0210383_10564303	Not Available	982	Open in IMG/M
3300022557\|Ga0212123_10822192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300022875\|Ga0224553_1073468	Not Available	707	Open in IMG/M
3300025442\|Ga0208034_1095616	Not Available	508	Open in IMG/M
3300025576\|Ga0208820_1041490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1338	Open in IMG/M
3300025922\|Ga0207646_10833326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300026557\|Ga0179587_10575999	Not Available	740	Open in IMG/M
3300027570\|Ga0208043_1125552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300027583\|Ga0209527_1035878	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300027634\|Ga0209905_1017917	Not Available	981	Open in IMG/M
3300027674\|Ga0209118_1019220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2197	Open in IMG/M
3300027737\|Ga0209038_10210873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300027738\|Ga0208989_10196855	Not Available	668	Open in IMG/M
3300027745\|Ga0209908_10189641	Not Available	559	Open in IMG/M
3300027853\|Ga0209274_10550695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300027854\|Ga0209517_10379174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300027889\|Ga0209380_10795211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300027898\|Ga0209067_10762857	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300027908\|Ga0209006_11393779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300028536\|Ga0137415_11323417	Not Available	539	Open in IMG/M
3300028746\|Ga0302233_10270401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300028747\|Ga0302219_10440533	Not Available	511	Open in IMG/M
3300028788\|Ga0302189_10099509	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300028788\|Ga0302189_10142934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300029883\|Ga0311327_10884757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300029939\|Ga0311328_10245233	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1356	Open in IMG/M
3300029943\|Ga0311340_10504632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1081	Open in IMG/M
3300029951\|Ga0311371_12552406	Not Available	518	Open in IMG/M
3300029982\|Ga0302277_1021334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3582	Open in IMG/M
3300029999\|Ga0311339_10031948	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7480	Open in IMG/M
3300030049\|Ga0302191_10392996	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300030494\|Ga0310037_10264381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300030520\|Ga0311372_10271353	All Organisms → cellular organisms → Bacteria	2719	Open in IMG/M
3300030524\|Ga0311357_10070044	All Organisms → cellular organisms → Bacteria	3549	Open in IMG/M
3300030706\|Ga0310039_10368258	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300030760\|Ga0265762_1198701	Not Available	502	Open in IMG/M
3300031233\|Ga0302307_10296492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300031250\|Ga0265331_10376550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300031711\|Ga0265314_10427833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300031820\|Ga0307473_11545780	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300032180\|Ga0307471_102659369	Not Available	634	Open in IMG/M
3300033826\|Ga0334847_019814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300033982\|Ga0371487_0444742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.18%
Host-Associated	Host-Associated	1.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.27%
Aquatic	Environmental → Aquatic	40.91%
Plants	Host-Associated → Plants	1.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.82%
Freshwater	Environmental → Aquatic → Freshwater	38.18%
Peat	Environmental → Terrestrial → Peat	15.45%
Sediment	Environmental → Aquatic → Sediment	1.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.82%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.91%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	38.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	23.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.45%
Loam	Environmental → Terrestrial → Soil → Loam	10.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.82%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.91%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	21.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.09%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.45%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	12.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.09%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.45%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.82%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.91%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	16.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	12.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.00%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.27%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.45%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.64%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.64%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.82%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	1.82%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.82%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.82%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.82%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.91%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.91%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.91%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022875	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 10-14	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027634	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812S1M	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033826	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 1-5	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_106337172	3300001593	Forest Soil	TLRTGQPYDAGYPAKFLDDTRAFLPRGGQWVASIHESPDAKDKTVDVEIHFRQQ*
JGI12053J15887_104245331	3300001661	Forest Soil	EAWTLHEGQPYNADYPNKFVDATGQLLPRGVRWAVSIHETPEAKDKTVTVEIRFKQQ*
Ga0062385_101403911	3300004080	Bog Forest Soil	WTLREGQPYNAEYPNKFLEDTRQILPRGVEWGTTVHESLDAKSKTVDVEVHFKQR*
Ga0062384_1000909661	3300004082	Bog Forest Soil	TLREGQPYNAEYLDKFLSDTRNLLPRGVRWAVTTHATPDPKDKTVDVEIHFKQQ*
Ga0070762_101649243	3300005602	Soil	NDDYLKQFLEHTGNLLPRGIHWGLTTHVTPDAKDKTVDVEIHFKQE*
Ga0070764_106051211	3300005712	Soil	AWTLRTGEPYNADYPKKFLEDTGSLLPRGVQWATTVHESPDAKDKTVDVEIHFKQQ*
Ga0075021_104954051	3300006354	Watersheds	ENAWTLHEGDPYNADYAKKFLEDTNRLLPAGVPWSVSIHEAVNAKDKTVDVTIRFQAN*
Ga0066660_114031631	3300006800	Soil	GQPYNADYPNKFVNDTGQILPRGVRWAVSIHETLEAKDKTVAVEIRFKQQ*
Ga0099792_110489441	3300009143	Vadose Zone Soil	TQATARLQAAWTLREGYPYNADYPKQFTNDTGQFLPRGLRWAITIHETPEARDKTVAVEIRYKQQ*
Ga0116128_10889931	3300009518	Peatland	PYNADYPKKFLDDTRDLVPRGVQWAVSIHETPDAKDKTVDVEIRFKQQ*
Ga0116222_15295161	3300009521	Peatlands Soil	TQAKARMQAAWHLSEGQPYNADYPKKFVNDTGQLLPRAVRWAVSIHESLDAKDKTVDVEIHFKQQ*
Ga0116138_10618883	3300009552	Peatland	YNADHPKKFVDETEELLPRSVRWAVSIHESLEVKDKTVDVEIRFKAQ*
Ga0116127_11403002	3300009618	Peatland	WTLREGQPYNADYPKKFLDDTRDLVPRGVQWAVSIHETPDAKDKTVDVEIRFKQQ*
Ga0116116_11178172	3300009621	Peatland	GQPYNADYPKKFLEDTRQLAPRGVPWAVSIHESLDAKDKTVDVEIRFKQQ*
Ga0116133_10128511	3300009623	Peatland	LDTQAMARMQAAWHLPEGQPYNADYPRKFVDDPEQLLPRSVRWAVSIHESLDAKDKTVDVEIRFKPQ*
Ga0116105_12482352	3300009624	Peatland	QAKARMVEAWTLREGQPYNAEYPRKFLEDTRKILPRGAEWDVTTHETLDAKDKTVAVEIRFKQQ*
Ga0116124_11403261	3300009634	Peatland	KARMQAAWHLREGQPYNADYPKKFVDETEQLLPRAVRWAVSIHESRDAKDKTVDVEIRFKPQ*
Ga0116124_11441492	3300009634	Peatland	TLREGQPYNADYPKKFLDDTRQLLSRDVPWTVSVHETPDANDKTVDVEIRFK*
Ga0116124_11696461	3300009634	Peatland	AKARMQAAWHLREGQPYNADYPKKFVDETEQLLPRAVRWAVSIHESRDAKDKTVDVEIRFKAQ*
Ga0116120_12679042	3300009641	Peatland	PYNADYPKKFVDETEQLLPRAVRWAVSIHESRDAKDKTVDVEIRFKAQ*
Ga0116106_11572831	3300009645	Peatland	AKARMQAAWHLREGQPYNADYPKKFVDDTGQLLPRAVRWAVSIHESLDAKDKTVDVEIRFKQQ*
Ga0116135_13272971	3300009665	Peatland	ILGLDTQTTAHMRAAWVLREGQPYNADYPSKFRMETGKLLPRGVQWSVTVHESLEKDKTVDVEIRFKQQ*
Ga0116223_102739031	3300009839	Peatlands Soil	NADYPKKFLDDTRQLVPRGVQWAIGVHESLDAKDKTVDVEIRFQQQ*
Ga0074045_101429281	3300010341	Bog Forest Soil	AAWTLHEGQPYDADYLKKFLQGTRELLPRGVHWGVTTHATPDAKDKTVDVEIHFKQQ*
Ga0136449_1017171352	3300010379	Peatlands Soil	GLDTQAKARMQEAWTLREGQPYNADYPKKFLDDTRQLVPRGVQWAVSIHETPDAKDKTVDVEIRFKQQ*
Ga0136449_1041268482	3300010379	Peatlands Soil	MQAAWHLSEGQPYNADYPKKFVNDTGQLLPRAVRWAVSIHESLDAKDKTVDVEIHFKQQ*
Ga0137392_107880282	3300011269	Vadose Zone Soil	LGLDTQATARMQAAWTLREGQPYNADYPEKFQDDTGQLLPRGVRWAISVHETLEAKDKTVDVEIRFKQQ*
Ga0137382_109930582	3300012200	Vadose Zone Soil	GLDTQATARMQAAWALREGQPYNADYPDKFRDDTGQLLPRGVRWAISVHETLEAKDKTVDVEIRFKQQ*
Ga0137363_111580862	3300012202	Vadose Zone Soil	GLDTQAKARMQSAWTLRQGQPYNADYPQKFLDDTGQLLPRGVQWNVSVHESPDATDKAVDVEIRFKQQ*
Ga0137360_115889961	3300012361	Vadose Zone Soil	TLREGQPYNADYPDKFRDDTGQLLPRGVRWAISVHETLEAKDKTVDVEIRFKQQ*
Ga0137390_120118182	3300012363	Vadose Zone Soil	QEAWTLRQGQPYNGDYPQKFLDDTRQLLPRGVQWSVSIHESPDAKDKTVDVEIRFKQQ*
Ga0181524_104484101	3300014155	Bog	GQPYNADYPKKFLADTDKLLPRGVQWAVTTHETLDAKDKTVDVEIHFKQQ*
Ga0181530_104764591	3300014159	Bog	AKARMVEAWALREGQPYNADYPKKFLADTDKLLPRGVQWAATTHETLDAKDKTVDVEIHFKQQ*
Ga0181530_106419231	3300014159	Bog	AKARMVEAWALREGQPYNADYPKKFLADTDKLLPRGVQWAVTTHETLDAKDKTVDVEIHFKQQ*
Ga0182014_102624002	3300014491	Bog	QAKARMRAAWTLREGEPYNADYPKKFLEDTRQLAPRGVPWAVSIHESLDAKDKTVDVEIRFKQQ*
Ga0182021_107715703	3300014502	Fen	QAAWTLREGQPYNADYLRKFLEDTRQAVPRGVQWAVSIHETLEAKDKTVDVEIHFKQQ*
Ga0182027_105493403	3300014839	Fen	QAKARMQAAWTLREGQPYNADYPKKFLEDTRDLVPRGVRWSVSIHETPDAKDKTVDVEIRFKQQ*
Ga0167668_10618852	3300015193	Glacier Forefield Soil	WTLREGQPYNADYPEKFRDDTGQLLPRGVRWAVSIHETLEAKDKTVGVEIRFKQQ*
Ga0137418_108232972	3300015241	Vadose Zone Soil	TARLQAAWTLREGQPYNADYPKQFTDDTGRLLPRGVRWAISIHETPEARDKTVAVEIRYKQQ*
Ga0181511_12388591	3300016702	Peatland	TLREGQPYNADYPKRFLDDTGQLLPRGVRWDISVHESLDAKDKTVDVEIRFKQQ
Ga0181515_11397661	3300016730	Peatland	ARMQAAWHLREGQPYNADYPKKFVDDTGQLLPRAVRWAVSIHESLDAKDKTVDVEIRFRQ
Ga0187849_11778992	3300017929	Peatland	LREGQPYNADYPKKFVDDTGQLLPRAVRWAVSIHESLDAKDKTVDVEIRFKQQ
Ga0187877_11923262	3300017931	Peatland	AKARMQAAWHLREGQPYNADYPKKFVDDTGQLLARAVRWAVSIHESLDAKDKTVDVEIRFKQQ
Ga0187801_100577121	3300017933	Freshwater Sediment	MQAAWTLREDQPYNADYPKKFLDDTRQLLPRGVPWTFSIHESLNAQEKTVDVEIRFKQQ
Ga0187781_110385911	3300017972	Tropical Peatland	RMVEAWTLRTGEPYNDDYLKKYLADTERLLPRGVHWGVTVHETPDVKDKTVDVEIRFQQQ
Ga0187780_105077501	3300017973	Tropical Peatland	DQPYNADYPKKFFEDTRQLVPRGVPWTVSVHESLDAKDKTVDVEIRFKQQ
Ga0187805_102375512	3300018007	Freshwater Sediment	QAAWTLREDQPYNADYPRKFLEDTRQLVPRGVPWNISVHESLDAKDKTVDVEIRFKQQ
Ga0187888_11139893	3300018008	Peatland	REGQTYNADYLKTFLADTGQLLPHGVHWAVSFHETPDAKDKTVEVEIRFKQQ
Ga0187884_103749971	3300018009	Peatland	LDTQSKARLQAAWTLREGQPYNADYPRKFLADTRDLVPRGVRWAMSIHETLDAKYKTVDVEIRFKQQ
Ga0187810_101113551	3300018012	Freshwater Sediment	GQPYNADYPKKFLDDTRGLVPRGVQWAVSIHETPEAKDKTVDVEIRFKQQ
Ga0187810_103142781	3300018012	Freshwater Sediment	QAAWKLHEGEPYNAGYLKKFLEDTGPLLPRGVQWGVSVHETPEVKDKTVDVEIRFKQQ
Ga0187861_101358963	3300018020	Peatland	WTLREGQPYNADYPRKFLEDTRKILPRGAEWDVTTHETLDAKDKTVAVEIRFKQQ
Ga0187857_101593661	3300018026	Peatland	IAGLDTQAKARMRAAWHLNEGQPYNADYPKKFVDETEELLPRSVRWAVSIHESLDAKDKTVDVEVRFKQQ
Ga0187857_101818531	3300018026	Peatland	MRAAWTLREGEPYNAEYPRQFLDDTRQFVPTGVQWAVTVHESVDAKAKTVDVEIRFKQR
Ga0187857_104801532	3300018026	Peatland	TLREGQPYNADYPKKFLDDTRDLVPRGVQWAVSVHETPDAKDKTVDVEIRFKQQ
Ga0187869_101257181	3300018030	Peatland	HLREGQPYNADYPKKFVDETEQLLPRAVRWAVSIHESRDAKDKTVDVEIRFKAQ
Ga0187869_106031911	3300018030	Peatland	DYPKKFVDETEELLPRSVRWAVSIHESLEVKDKTVDVEIRFKAQ
Ga0187867_103770472	3300018033	Peatland	ITGLDTKATARMVEAWALHAGQPYNAGYLKKYLDDTRQLLPRGVSWGTTIHETPDAKDKTVDVEIRFKQQ
Ga0187883_101663921	3300018037	Peatland	IVGLDTQAKAQMQAAWTLREGQPYNADYPSKFLADTRQLLPRGVAWAVTVHETPDAKDKTVDVEVRFRQQ
Ga0187862_109093982	3300018040	Peatland	GQPYNADYPKKFVDDTEQLLPRAVRWAVSIHESLDAKDKTVDVEIRFKPQ
Ga0187890_105020582	3300018044	Peatland	AKARMQAAWHLREGQPYNADYPKKFVDETEQLLPRAVRWAVSIHESRDAKDKTVDVEIRFKAQ
Ga0187852_11294833	3300019082	Peatland	AWTLREGQPYNADYPKKFLDDTRDLVPRGVQWAVSIHETPDAKDKTVDVEIRFKQQ
Ga0187852_11889971	3300019082	Peatland	AWHLREGQPYNADYPKKFVDETEELLPRSVRWAVSIHESLEVKDKTVDVEIRFKAQ
Ga0182031_12644522	3300019787	Bog	VALHAGQPYNAGYLKKYLDDTRQLLPRGVSWGTTIHETPDAKDKTVDVEIRFKQQ
Ga0179592_102653281	3300020199	Vadose Zone Soil	RATARMQAAWTLREGQPYNADYPNKFVNDTGQILPRGVRWAVSIHETLEAKDKTVDVEIRFKQQ
Ga0179596_103989602	3300021086	Vadose Zone Soil	REGQPYNADYPGKFQDDTGQLLPRGVRWAISVHETLEAKDKTVDVEIRFKQQ
Ga0210386_111273792	3300021406	Soil	ADYPGKFRMDTGKLLPREVQWAVTVHESLEKDKTVDVEIRFKQQ
Ga0210383_105643033	3300021407	Soil	WTLREGQPYNADYPEEFQDHTGQLLPRGVRWVISIHETLEAKDKTVDVEVRFKQQ
Ga0212123_108221921	3300022557	Iron-Sulfur Acid Spring	QAKARLQEAWTLHEGQPYNADYPRKFLEDTRNLVPRGVQWDISLHETPDAKDKTVDVEIRFKQL
Ga0224553_10734682	3300022875	Soil	GQPYNAGYLKKYLDDTRQLLPRGVSWGTTIHETPDAKDKTVDVEIRFKQQ
Ga0208034_10956161	3300025442	Peatland	EGQPYNADYPKKFLDDTRDLVPRGVQWAVSIHETPDAKDKTVDVEIRFKQQ
Ga0208820_10414903	3300025576	Peatland	EAWALREGQPYNADYPKKFLADTDKLLPRGVQWAVTTHETLDAKDKTVDVEIHFKQQ
Ga0207646_108333261	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AWTLREGQPYNSDYPKEFLKNAFRLLPHGEQWAADIREAVNTKDKTVDVTLRFTAR
Ga0179587_105759991	3300026557	Vadose Zone Soil	TLREGQPYNADYPNKFVDDTGQLLPRGVRWAISIHETLEAKDKTVDVEIRFKQQ
Ga0208043_11255522	3300027570	Peatlands Soil	NADYPKKFVNDTGQLLPRAVRWAVSIHESLDAKDKTVDVEIHFKQQ
Ga0209527_10358782	3300027583	Forest Soil	AKDRMREAWTLRQGQPYNADYPKKFLEDTRSLVPPEVEWAISVHETPDAKDKTVDVEISFKQQ
Ga0209905_10179173	3300027634	Thawing Permafrost	ALHAGQPYNAGYLKKYLDDTRQLLPRGVSWGTTIHETPDAKDKTVDVEIRFKQQ
Ga0209118_10192201	3300027674	Forest Soil	NADYPGKFRDDTGQLLPRGVRWAISVHETLEAKDKTVDVEIRFKQQ
Ga0209038_102108732	3300027737	Bog Forest Soil	NADYLKKYLHDSGQFLPRGVHWAMTMHETPEVKDKTVDVEIHFRQQ
Ga0208989_101968552	3300027738	Forest Soil	NADYPNKFVDATGQLLPRGVRWAVSIHETPEAKDKTVTVEIRFKQQ
Ga0209908_101896412	3300027745	Thawing Permafrost	DTQAKARMEAAWTLHEGQPYNADYLKKFLADTRDLLPRGLQWAVSVHETPEAKDKTVDVEIHFKQQ
Ga0209274_105506952	3300027853	Soil	RLIAAWTLHEGQPYNADYPHKFLDDTGNLLPPGVRWDITLHETLEKDKTVDVELHFK
Ga0209517_103791741	3300027854	Peatlands Soil	TGLDTQAKARMQAAWHLSEGQPYNADYPKKFVNDTGQLLPRAVRWAVSIHESLDAKDKTVDVEIHFKQQ
Ga0209380_107952112	3300027889	Soil	TGLDTQAKARLEAAWTLHQGQPYDADYPKKFQEDTGSLLPRGIRWAVTVHESLDAKDKTVDVEIHFKQQ
Ga0209067_107628571	3300027898	Watersheds	LENAWTLHEGQPYNADYPKKFLVDTDRLLPDGVAWAVSIHEAVNAKDKTVDVTIRFQVK
Ga0209006_113937792	3300027908	Forest Soil	LIAAWTLHEGQPYNADYPHKFLDDTGNLLPPGVRWDITLHETLEKDKTVDVELHFK
Ga0137415_113234171	3300028536	Vadose Zone Soil	AWNLREGQPYNADYPGKFQDDTGQLLPRGVRWAVSIHETLEAKDKTVDVEIRFKQQ
Ga0302233_102704012	3300028746	Palsa	TLKTGQPFNDDYLKQFLEHTRNLLPRGVQWGLTTHVTPDAKDKTVDVEIHFKQE
Ga0302219_104405331	3300028747	Palsa	DTDSTARMRAAWTLKTGQPFNDDYLKQFLEHTRNLLPRGVQWGLTTHVTPDAKDKTVDVEIHFKQE
Ga0302189_100995091	3300028788	Bog	AWTLREGQPYNADYPRQFIRDTDQLLPRGVQWGIEVHETPDPRDKTVDVEIHFKQR
Ga0302189_101429343	3300028788	Bog	KMVAAWTLQVGQPYNAEYPKKFLRDTDQLLPRGVGWAVEVHETPDSRDKTVDVEIHFKQQ
Ga0311327_108847572	3300029883	Bog	PYNAEYSKKFLRDADSLLPRGVAWAVQVHETPDARDKTVDVEIHYKQQ
Ga0311328_102452331	3300029939	Bog	WTLQVGQPYNAEYPKKFLRDTDQLLPRGVGWAVEVHETPDSRDKTVDVEIHFKQQ
Ga0311340_105046321	3300029943	Palsa	VAAWTLQVGQPYNAEYPKKFLRDTDQLLPRGVGWAVEVHETPDSRDKTVDVEIHFKQQ
Ga0311371_125524062	3300029951	Palsa	LNGLNSGTIARLRAAWTLHEGQPYNANYPAKFVEDTREMLPRGVQWKVSVHETPDARDKTVDVDIRFTQQ
Ga0302277_10213344	3300029982	Bog	MVAAWTLREGQPYNADYPRQFIRDTDQLLPRGVQWGIEVHETPDPRDKTVDVEIHFKQR
Ga0311339_100319487	3300029999	Palsa	PFNDDYLKQFLEHTRNLLPRGVQWGLTTHVTPDAKDKTVDVEIHFKQE
Ga0302191_103929962	3300030049	Bog	KMVAAWTLREGQPYNADYPRQFIRDTDQLLPRGVQWGIEVHETPDPRDKTVDVEIHFKQR
Ga0310037_102643812	3300030494	Peatlands Soil	GQPYNADYPKKFVDDTGQLLPRSVRWAVSIHESLDAKDKTVDVEIHFKQQ
Ga0311372_102713534	3300030520	Palsa	AWTLKTGQPFNDDYLKQFLEHTRNLLPRGVQWGLTTHVTPDAKDKTVDVEIHFKQE
Ga0311357_100700441	3300030524	Palsa	TDSTARMRAAWTLKTGQPFNDDYLKQFLEHTRNLLPRGVQWGLTTHVTPDAKDKTVDVEIHFKQE
Ga0310039_103682582	3300030706	Peatlands Soil	RMLEAWTLREGQPYNADYPRKFLADTRQILPRGTEWAVTTHETLDAKDKTVEVEIRFKQQ
Ga0265762_11987011	3300030760	Soil	HVRAAWTLRQGQPYNADYPNKFRADTGKLLPRGVQWEVTIHESLEKDKTVDIEIRFKQQ
Ga0302307_102964923	3300031233	Palsa	TLHEGQPYNANYPAKFVEDTREMLPRGVQWKVSVHETPDARDKTVDVDIRFTQQ
Ga0265331_103765501	3300031250	Rhizosphere	PYNADYLKTFLSDTGQLLPRGVQWDVSTHATPDAKDKTVDVEIHFKQQ
Ga0265314_104278332	3300031711	Rhizosphere	KAKMEAAWKLRQGEPYNADYLKKFLSDTGQLLPRGVQWDVSTHATPDAKDKTVDVEIHFKQQ
Ga0307473_115457802	3300031820	Hardwood Forest Soil	LGLDTQARARMQEAWTLRQGQPYNADYPQKFLDDTRQLLPHGVQWNISIHASPDAKDKTVDVEIRFKQQ
Ga0307471_1026593692	3300032180	Hardwood Forest Soil	QPYNADYPQKFLDDTRQLLPRGVQWNISIHASPDAKDKTVDVEIRFKQQ
Ga0334847_019814_525_704	3300033826	Soil	MRAAWTLREGEPYNAEYLKKYLRETGPLLPRGLDWAVTTHETLDEKDKTVDVEIRFKQR
Ga0371487_0444742_409_552	3300033982	Peat Soil	YNADYPRKFLDDTRDLVPRGVRWSVSIHETPDAKDKTVDVEIRFKQQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087283

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences