Metagenome Family F087271

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F087271
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	100 residues
Representative Sequence	ATAADRFKNDLDKDKTLPKAEKDAAKKDVELLIKQADAVKSRTTDGKPATGEVRQLVEQVAKLQTFVGAHPIPTMTNWQAVQASLGKLQQAFGLTP
Number of Associated Samples	92
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.78 %
% of genes near scaffold ends (potentially truncated)	95.45 %
% of genes from short scaffolds (< 2000 bps)	89.09 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.364 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (11.818 % of family members)
Environment Ontology (ENVO)	Unclassified (41.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.091 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.68% β-sheet: 0.00% Coil/Unstructured: 40.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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SCOP family	SCOP domain	Representative PDB	TM-score
a.216.1.1: I/LWEQ domain	d1u89a1	1u89	0.79115
a.29.6.1: Plant invertase/pectin methylesterase inhibitor	d1x91a_	1x91	0.75648
a.29.13.1: Bacillus cereus metalloprotein-like	d3dbya2	3dby	0.75447
f.13.1.0: automated matches	d6lm1a1	6lm1	0.7511
a.29.6.0: automated matches	d1xg2b1	1xg2	0.74571

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF06742	DUF1214	3.64
PF00158	Sigma54_activat	2.73
PF00497	SBP_bac_3	1.82
PF01145	Band_7	1.82
PF01464	SLT	1.82
PF13590	DUF4136	0.91
PF00326	Peptidase_S9	0.91
PF01370	Epimerase	0.91
PF00884	Sulfatase	0.91
PF06863	DUF1254	0.91
PF07730	HisKA_3	0.91
PF06085	Rz1	0.91
PF03965	Penicillinase_R	0.91
PF00144	Beta-lactamase	0.91
PF00355	Rieske	0.91
PF02780	Transketolase_C	0.91
PF00005	ABC_tran	0.91
PF04831	Popeye	0.91
PF12729	4HB_MCP_1	0.91
PF00072	Response_reg	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	4.55
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	3.64
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.91
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.91
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.91
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.91
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.91
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.91
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.91
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.91
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
All Organisms	root	All Organisms	43.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
cellular organisms	root	All Organisms → cellular organisms	43.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	9.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.18 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.91 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5.45 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	3.64 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.82 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.82 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.91 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.91 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	3.64 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.91 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.91 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.91 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.91 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	3.64 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	1.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.82 %
Morganellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae	0.91 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.91 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.91 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	3.64 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	1.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.82 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.91 %
Photorhabdus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Photorhabdus	0.91 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.91 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
unclassified Syntrophaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae	1.82 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.82 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.91 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.91 %
Photorhabdus temperata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Photorhabdus → Photorhabdus temperata	0.91 %
Pseudomonas syringae group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
Syntrophaceae bacterium PtaU1.Bin231	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaU1.Bin231	1.82 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.82 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.91 %
Pseudomonas syringae group genomosp. 1	species subgroup	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1	0.91 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.91 %
Photorhabdus temperata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Photorhabdus → Photorhabdus temperata	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.36 %
Syntrophaceae bacterium PtaU1.Bin231	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaU1.Bin231	1.82 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.82 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.82 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	0.91 %
Acidobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	0.91 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.91 %
Photorhabdus temperata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Photorhabdus → Photorhabdus temperata	0.91 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.91 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000858\|JGI10213J12805_10471336	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300000891\|JGI10214J12806_11654568	Not Available	579	Open in IMG/M
3300000956\|JGI10216J12902_108088419	Not Available	761	Open in IMG/M
3300004157\|Ga0062590_100375105	Not Available	1152	Open in IMG/M
3300004480\|Ga0062592_100624424	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300004480\|Ga0062592_101835804	Not Available	594	Open in IMG/M
3300004643\|Ga0062591_101349080	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005093\|Ga0062594_101434405	Not Available	703	Open in IMG/M
3300005294\|Ga0065705_11142474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Morganellaceae → Photorhabdus → Photorhabdus temperata	513	Open in IMG/M
3300005295\|Ga0065707_10411991	Not Available	838	Open in IMG/M
3300005328\|Ga0070676_11482349	Not Available	522	Open in IMG/M
3300005339\|Ga0070660_100256440	All Organisms → cellular organisms → Bacteria	1427	Open in IMG/M
3300005341\|Ga0070691_11051054	Not Available	511	Open in IMG/M
3300005343\|Ga0070687_100396501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	904	Open in IMG/M
3300005345\|Ga0070692_10709282	Not Available	678	Open in IMG/M
3300005356\|Ga0070674_100457149	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300005365\|Ga0070688_100760075	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005366\|Ga0070659_101153761	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300005438\|Ga0070701_10605350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300005440\|Ga0070705_101692775	Not Available	534	Open in IMG/M
3300005441\|Ga0070700_101761510	Not Available	533	Open in IMG/M
3300005459\|Ga0068867_101746909	Not Available	584	Open in IMG/M
3300005544\|Ga0070686_101301270	Not Available	607	Open in IMG/M
3300005547\|Ga0070693_101254754	Not Available	571	Open in IMG/M
3300005564\|Ga0070664_101025091	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300005615\|Ga0070702_100300293	Not Available	1110	Open in IMG/M
3300005834\|Ga0068851_10348861	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300005841\|Ga0068863_102487812	Not Available	527	Open in IMG/M
3300005842\|Ga0068858_100561396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1105	Open in IMG/M
3300006358\|Ga0068871_100063773	All Organisms → cellular organisms → Bacteria	3014	Open in IMG/M
3300006358\|Ga0068871_100499922	Not Available	1096	Open in IMG/M
3300006358\|Ga0068871_101165819	Not Available	722	Open in IMG/M
3300009012\|Ga0066710_103120453	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300009094\|Ga0111539_10400003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1600	Open in IMG/M
3300009094\|Ga0111539_12143585	Not Available	648	Open in IMG/M
3300009177\|Ga0105248_10890233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1005	Open in IMG/M
3300009553\|Ga0105249_12639257	Not Available	574	Open in IMG/M
3300009609\|Ga0105347_1385725	Not Available	601	Open in IMG/M
3300010373\|Ga0134128_10797458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1047	Open in IMG/M
3300010397\|Ga0134124_10131227	All Organisms → cellular organisms → Bacteria → Acidobacteria	2216	Open in IMG/M
3300010397\|Ga0134124_12646101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	545	Open in IMG/M
3300010399\|Ga0134127_12329422	Not Available	615	Open in IMG/M
3300010400\|Ga0134122_10481145	All Organisms → cellular organisms → Bacteria → Acidobacteria	1118	Open in IMG/M
3300010403\|Ga0134123_12796564	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300012905\|Ga0157296_10410444	Not Available	509	Open in IMG/M
3300012906\|Ga0157295_10404824	Not Available	510	Open in IMG/M
3300012958\|Ga0164299_10927821	Not Available	634	Open in IMG/M
3300013306\|Ga0163162_11280192	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	833	Open in IMG/M
3300013308\|Ga0157375_10144578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	2508	Open in IMG/M
3300014322\|Ga0075355_1184737	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300014325\|Ga0163163_11796379	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300014745\|Ga0157377_11005195	Not Available	632	Open in IMG/M
3300014866\|Ga0180090_1095143	Not Available	534	Open in IMG/M
3300014969\|Ga0157376_10623182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1076	Open in IMG/M
3300014969\|Ga0157376_12358182	Not Available	571	Open in IMG/M
3300015371\|Ga0132258_10071243	All Organisms → cellular organisms → Bacteria → Acidobacteria	8061	Open in IMG/M
3300015371\|Ga0132258_10922475	All Organisms → cellular organisms → Bacteria	2205	Open in IMG/M
3300015371\|Ga0132258_12816187	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300015371\|Ga0132258_13936032	Not Available	1009	Open in IMG/M
3300015372\|Ga0132256_101242551	Not Available	858	Open in IMG/M
3300015372\|Ga0132256_102290510	Not Available	644	Open in IMG/M
3300015373\|Ga0132257_104261541	Not Available	520	Open in IMG/M
3300015373\|Ga0132257_104597235	Not Available	502	Open in IMG/M
3300015374\|Ga0132255_101173349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1156	Open in IMG/M
3300015374\|Ga0132255_103371532	Not Available	680	Open in IMG/M
3300015374\|Ga0132255_106312583	Not Available	502	Open in IMG/M
3300018075\|Ga0184632_10403848	Not Available	574	Open in IMG/M
3300018078\|Ga0184612_10148963	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300018083\|Ga0184628_10678742	Not Available	515	Open in IMG/M
3300018422\|Ga0190265_12508725	Not Available	614	Open in IMG/M
3300018476\|Ga0190274_12038643	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300018476\|Ga0190274_13592611	Not Available	524	Open in IMG/M
3300020000\|Ga0193692_1007354	All Organisms → cellular organisms → Bacteria	2775	Open in IMG/M
3300022889\|Ga0247785_1051449	Not Available	522	Open in IMG/M
3300025321\|Ga0207656_10429123	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300025903\|Ga0207680_10074945	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2109	Open in IMG/M
3300025903\|Ga0207680_11316923	Not Available	513	Open in IMG/M
3300025907\|Ga0207645_10401261	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300025918\|Ga0207662_11042903	Not Available	581	Open in IMG/M
3300025931\|Ga0207644_10726095	Not Available	829	Open in IMG/M
3300025932\|Ga0207690_11337824	Not Available	599	Open in IMG/M
3300025932\|Ga0207690_11594629	Not Available	545	Open in IMG/M
3300025935\|Ga0207709_10443738	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp.	1001	Open in IMG/M
3300025937\|Ga0207669_11483286	Not Available	578	Open in IMG/M
3300025942\|Ga0207689_11441782	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300026041\|Ga0207639_11622300	Not Available	607	Open in IMG/M
3300026075\|Ga0207708_12014567	Not Available	505	Open in IMG/M
3300026078\|Ga0207702_11478518	Not Available	673	Open in IMG/M
3300026121\|Ga0207683_10816540	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300028380\|Ga0268265_10250658	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaU1.Bin231	1568	Open in IMG/M
3300028587\|Ga0247828_10454288	Not Available	751	Open in IMG/M
3300031538\|Ga0310888_10053449	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300031547\|Ga0310887_10708850	Not Available	625	Open in IMG/M
3300031562\|Ga0310886_10690081	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300031716\|Ga0310813_11208248	Not Available	696	Open in IMG/M
3300031740\|Ga0307468_102385481	Not Available	516	Open in IMG/M
3300031847\|Ga0310907_10353315	Not Available	754	Open in IMG/M
3300031908\|Ga0310900_10042274	All Organisms → cellular organisms → Bacteria	2616	Open in IMG/M
3300031944\|Ga0310884_10563413	Not Available	676	Open in IMG/M
3300032000\|Ga0310903_10466605	Not Available	654	Open in IMG/M
3300032000\|Ga0310903_10655698	Not Available	563	Open in IMG/M
3300032002\|Ga0307416_100151937	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2125	Open in IMG/M
3300032003\|Ga0310897_10286258	Not Available	749	Open in IMG/M
3300032012\|Ga0310902_10046437	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → unclassified Syntrophaceae → Syntrophaceae bacterium PtaU1.Bin231	2097	Open in IMG/M
3300032013\|Ga0310906_10297726	Not Available	1028	Open in IMG/M
3300032157\|Ga0315912_10676453	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	822	Open in IMG/M
3300033412\|Ga0310810_10574147	Not Available	1093	Open in IMG/M
3300033418\|Ga0316625_100232526	All Organisms → cellular organisms → Bacteria	1246	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.36%
Host-Associated	Host-Associated	43.64%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.82%
Plants	Host-Associated → Plants	43.64%
Aquatic	Environmental → Aquatic	4.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.18%
Sediment	Environmental → Aquatic → Sediment	4.55%
Roots	Host-Associated → Plants → Roots	3.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.73%
Loam	Environmental → Terrestrial → Soil → Loam	10.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.55%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.82%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.18%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.64%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.64%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.00%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	8.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.73%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.91%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014866	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10D	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_104713361	3300000858	Soil	TLPKPEKDAAKKDVELLVKRADAVKSRTSDGKPATGEMRQLVEQVAKLQTFVGAHPIPAMTNWQAVQTSLGKLQQAFGLTP*
JGI10214J12806_116545681	3300000891	Soil	FKNDLDKDKTLPKAETDAAKKDVELLIKQADAVKSRTSDGKPATGEVRQLVEQVAKLQTFVGAHPIPTMTNWQAVQTSLGKLQQAFGLTP*
JGI10216J12902_1080884191	3300000956	Soil	ARRMNDKEAAGAAGAVATAAGRFKNDLGKASQLPKPDRDAAKKDVEALVKLANSVKSRISDGKPATGEVRQLVEQTARVQTFVDAHPMPEAAASWQAVRGSLGNLHQAFGLTK*
Ga0062590_1003751051	3300004157	Soil	GAIVRRMNDAETAEAAGALASAADQFKRDLDKATSLPKPDRDTAKKDVDALIKQANAVKSRVGDGKPATAEVRQLVDQVARLQTQFTANPLPAMSNWQAVQDELGKLQRAFGLTP*
Ga0062592_1006244242	3300004480	Soil	KPDKDAAKKDTDLLIKQANAVKSRTSDGKLATGEMRQLADQVAKLQAFVGAHPLPTMTNWQAVQNSLGKLQQAFGLSP*
Ga0062592_1018358041	3300004480	Soil	LPDGATVRRMNDKETAGFATAIATAADRFKSDLDKASTLAKPDRDAAKKDAEILIKQANAVKSRTSDGKLATAELRQLVEQVAKLQTFVGVHQIPTMTNWEAVQTSLGKLQQAFGLTP*
Ga0062591_1013490802	3300004643	Soil	FKSDLDKATTLAKPDKDAAKKDTDLLIKQANAVKSRTSDGKLATGEMRQLADQVAKLQAFVGAHPLPTMTNWQAVQNSLGKLQQAFGLSP*
Ga0062594_1014344052	3300005093	Soil	AADRFKDDIDNDKTLPKTEREAAKKDVEVLIKHADDVKDRTRDGRSATAEMRQLVDQVAKVQTFVGAHPNPEITNWQGVQSSLVTLREAFGLTP*
Ga0065705_111424741	3300005294	Switchgrass Rhizosphere	KETAGLATVVATAAGRFKSDLDKATALAKPDRDAVKKEAELLIKQANAVKSRTSDGKPATGELRQLVEQVAKLQTFVDAHSIPTMTNWQAVQTSLDKLQQAFGPTP*
Ga0065707_104119912	3300005295	Switchgrass Rhizosphere	DKETANVASTIADAANRFKSDLDKDKTILKPEKDIAKKDVEMLIKQADAVKSRTSDGKPATGEVRQVVEQVAKVQTFVDAHPIPTMTNWQAVQTSLGKLQQAFGLTP*
Ga0070676_114823491	3300005328	Miscanthus Rhizosphere	IATAADRFKSDLDKASTLAKPDRDAVKKDADILIKQANAVKSRTSDGKLATAELRQLVEQVAKLQTFVGAHPIPTMTNWEAVQTSLGKLQQAFGLTP*
Ga0070660_1002564402	3300005339	Corn Rhizosphere	VNDKETAATATAIATAADRFKNDLDKDKTLPKAEKDAAKKDVELLIKQADAVKSRTTDGKPATGEVRQLVEQVATLQTFVGAHPIPTLTNWQAVETSLGKLQQAFGLTP*
Ga0070691_110510542	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	AGAIATAADRFKDDLDKTSTLAKPEREGAKKDVELLIRHAEAVKDHTSDGKPATADVRLLVEQTVKVQTFVGAHQVPAANWQAVQSSLEKVRQAFGLAE*
Ga0070687_1003965012	3300005343	Switchgrass Rhizosphere	DRFKSDLDKASTLAKPDRDAVKKDADILIKQANAVKSRTSDGKLATAELRQLVEQVAKLQTFVGAHPIPTMTNWEAVQTSLGKLQQAFGLTP*
Ga0070692_107092821	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VASTIADAANRFKSDLDKDKTILKPEKDVAKKDVEMLIKQADAVKSRTSDGKPATGEVRQVVEQVAKVQTFVDAHPIPTMTNWQAVQTSLGTLQQAFGLTP*
Ga0070674_1004571492	3300005356	Miscanthus Rhizosphere	ATSIATAANHFKSDLDKASTLAKPDRDTAKKDVDLLIKQANAVKSRTSDGKLATAELRQLVEQVGKLQTFVGAHPIPTMTNWEAVQTSLGKLQQAFGLTP*
Ga0070688_1007600751	3300005365	Switchgrass Rhizosphere	PKPDKDAAKKDLDTLVKQADLVKSRTNDGKPATAEVRQLVEQVARFQTFVAAHAVPATNWQAVQAPLVKLRQAFGLAQ*
Ga0070659_1011537612	3300005366	Corn Rhizosphere	ETAGFATAIATAADRFKSDLDKASTLAKPDRDAVKKDADILIKQANAVKSRTSDGKLATAELRQLVEQVAKLQTFVGAHPIPTMTNWEAVQTSLGKLQQAFGLTP*
Ga0070701_106053502	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	PADAAVRRMNDKETANVASTIADAANRFKSDLDKDKTILKPEKDIAKKDVEMLIKQADAVKSRTSDGKPATGEVRQVVEQVAKVQTFVDAHPIPAMTNWRTVQTSLGKLQQAFGLTP*
Ga0070705_1016927752	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RMNDKETAGAAAAVAEAGDRFKDDIDHDKTLPKSESEAAKKDVEALVKSADAVKDRTNDGKPATAEMRQLVEQAARVQTFIGGHAMPTLSNWQAVQTSLAKLRQAFGLPM*
Ga0070700_1017615101	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	DKASTLAKPDRDAVKKDADILIKQANAVKSRTSDGKLATAELRQLVEQVAKLQTFVGAHPIPTMTNWEAVQTSLGKLQQAFGLTP*
Ga0068867_1017469091	3300005459	Miscanthus Rhizosphere	VATTIAQAANRFKIDLGNDKTLLKPEKDTAKKDLEMLIKQADAVKSRTSDGKPATGEVRQVVEQVAKVQTFVDAHPIPTMTNWQAVQTSLGTLQQAFGLTP*
Ga0070686_1013012702	3300005544	Switchgrass Rhizosphere	LATAAGRFKNDLGKASTVPKPDLDGVKKDIDVLVKHADAVKSRTNDGKPATAEMRLLVAQVAKLQTFVNAHQIPTALENWKTVQASLDKLQQAFGLTK*
Ga0070693_1012547542	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	DKETAGAAAAIADAADRFKDDIDNDKSLPKSEREIAKKDVEELIKLADAVKDRTNDGKSATAELRQLVEQAATVQTFIGAHPMSTLSNWQAAQTSLVKLRQAFGLPM*
Ga0070664_1010250912	3300005564	Corn Rhizosphere	GATVRRMNDKETAGFATAIATAADRFKSDLDKASTLAKPDRDAVKKDADILIKQANAVKSRTSDGKLATAELRQLVEQVAKLQTFVGAHPIPTMTNWEAVQTSLGKLQQAFGLTP*
Ga0070702_1003002931	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	TAADRFKNDLDKDKTLPKAEKDAAKKDVELLIKQADAVKSRTTDGKPATGEVRQLVEQVATLQTFVGAHPIPTLTNWQAVETSLGKLQQAFGLTP*
Ga0068851_103488612	3300005834	Corn Rhizosphere	DRFKDDIDNDKSLPKSEREIAKKDVEELIKLADAVKDRTNDGKSATAELRQLVEQAATVQTFIGAHPMSTLSNWQAAQTSLVKLRQAFGLPM*
Ga0068863_1024878122	3300005841	Switchgrass Rhizosphere	NETAAAAGAVASAADRFKNNLDKSSTLSKDDKEAAKKDVELLIKQADAVKDRTNDDKPATAEVRQLVEQVARVQTFVGAHQIPEAMTDWQSVKTSLGTVQQSFGLTQ*
Ga0068858_1005613963	3300005842	Switchgrass Rhizosphere	VRRMNDKETAGFATAIATAADRFKSDLDKASTLAKPDRDAVKKDADILIKQANAVKSRTSDGKLATAELRQLVEQVAKLQTFVGAHPIPTMTNWEAVQTSLGKLQQAFGLTP*
Ga0068871_1000637731	3300006358	Miscanthus Rhizosphere	FPDGATPSRVNDKETAATATAIATAADRFKNDLDKDKTLPKAEKDAAKKDVELLIKQADAVKSRTTDGKPATGEVRQLVEQVATLQTFVGAHPIPTLTNWQAVETSLGKLQQAFGLTP*
Ga0068871_1004999222	3300006358	Miscanthus Rhizosphere	LATAADNFKDDLDKDKTLAKPEKDVARKDVEMLIKQADAVKSRTNDGKPATGEMRQLAEQVAKVQTFVGAHPMPVMTNWQAVQTSLGKLQQAFGLTP*
Ga0068871_1011658192	3300006358	Miscanthus Rhizosphere	LPEGAAIRRMNDKEVAGVAESLAAAADRFKNDINKDAALAKPDKDAAKKDVEVLAKQANSVKSRVSDGQPATAEVRQVIEQIAKIQTFVIAHPSTVVGNWQAVQTSSGKLQQAFGLVP*
Ga0066710_1031204531	3300009012	Grasslands Soil	DDLDNLKTLPKPEKDAAMRDIEMLIKHAETVKDRTSDGKPATAEVRQLVEQVAKVRTFVDAHQTPAAMANWQTVQTSLGTLHQAFGLTK
Ga0111539_104000031	3300009094	Populus Rhizosphere	AADRFKNDLAKDKTLPKAETDAAKKDVELLIKHADAVKSRTSDGKPATGEVRQLVEQVAKLQTFVGAHPIPTMTNWQAVQTSLGKLQQAFGLTP*
Ga0111539_121435853	3300009094	Populus Rhizosphere	VRRMNDKETAAAAEAIATAAGRFKNDLGKEKTLPKPDLEAAKKDIDVLISQANAVKSRTSDGKPATGEVRQLVEQVAKVQAFVDAHQIPGALANWQAVQPSLVKLQQSFGLTK*
Ga0105248_108902333	3300009177	Switchgrass Rhizosphere	KATTVAKPDRDAAKKDADVLIKQANAVKSRLSDGKVATAELRQLVEQVAKLQTFVGAHPIPTMTNWEAVQTSLGKLQQAFGLTP*
Ga0105249_126392571	3300009553	Switchgrass Rhizosphere	VNDKETAATATAIATAADRFKNDLDKDKTLPKAETDAAKKDVELLIKQADAVKSRTSDGKPATGEVRQLVEQVAKLQTFVGAHPIPTMTNWQAVQTSLGKLQQAFGLTP*
Ga0105347_13857252	3300009609	Soil	SAIATSADRFKSDLDKDKILPKPEKDAAKKDVEMLIKQADAVKSRTSDGKPATGEVRQLAEQVAKVQTFVDAHPSAAVTNWQSVQTSFAKLQQAFGLRP*
Ga0134128_107974581	3300010373	Terrestrial Soil	ASTLAKPGRDAVKKEADILIKQANAVKSRTSDGKLATAELRQLVEQVAKLQTFVGAHPIPTMTNWEAVQTSLGKLQQAFGLTP*
Ga0134124_101312271	3300010397	Terrestrial Soil	KETAATATAIATAADRFKNDLDKDKTLPKAEKDAAKKDVELLIKQADAVKSRTTDGKPATGEVRQLVEQVATLQTFVGAHPIPTLTNWQAVETSLGKLQQAFGLTP*
Ga0134124_126461011	3300010397	Terrestrial Soil	MNDKETAGFATAIATAADHFKSDLDKASTIAKPDRDAAKKDAEVLIKQANAVKSRTSDGKLATAELRQLVEQIAKLQTFVEAHPIPTMTNWQAVQTSLGKLQQAFGATP*
Ga0134127_123294222	3300010399	Terrestrial Soil	AADRFKDDIDNDKTLPKTEKEAAKKDVEVLIKHADDVKDRTRDGRSATAEMRQLVDQVAKVQTFVGAHPNPEITNWQGVQSSLVTLREAFGLTP*
Ga0134122_104811453	3300010400	Terrestrial Soil	AEAYGTTSALPDGATTRRMNDKETDGAAAAGAAAGDSFKDDIDHDKTLPKSESEAAKKDVEALVKSADAVKDRTNDGKPATAEMRQLVEQAARVQTFIGGHAMPTLSNWQAVQTSLAKLRQAFGLPM*
Ga0134123_127965642	3300010403	Terrestrial Soil	DKDKTLPKPEKDAAKKDVELLIKQANAVKSRTSDGNPATAEMRQLAEQVAKLQTFVGAHPIPTMTNWQTVQTSLAKLQQGFGLAP*
Ga0157296_104104441	3300012905	Soil	ADRFKDDIDNHKTLPKPEREAAKKDVEVLIKLADAVKDRTNDGNPATAELRQLVEQVARVQTFIGVHPMPTMSNWQAVQTSLVKLRQAFGLTT*
Ga0157295_104048241	3300012906	Soil	DAANRFKSDLDKDKTILKPEKDIAKKDVEMLIKQADAVKSRTSDGKPATGEVRQVVEQVAKVQTFVDAHPIPTMTNWQAVQTSLGTLQQAFGLTP*
Ga0164299_109278211	3300012958	Soil	DDLDKDKTLPKPEKDAAKKDVELLIKQADAVKSRTSDGKPATGEARQLVEQVAKLQTFVGAHSIPTMTNWQAVQTSLGKLQQAFGLTP*
Ga0163162_112801922	3300013306	Switchgrass Rhizosphere	VAESLAAAADRFKNDINKDAALAKPDKDAAKKDVEVLAKQANSVKSRVSDGQPATAEVRQVIEQIAKIQTFVIAHPNTVVGNWQAVQTSSGKLQQAFGLMP*
Ga0157375_101445782	3300013308	Miscanthus Rhizosphere	PDGATPSRVNDKETAATATAIATAADRFKNDLDKDKTLPKAEKDAAKKDVELLIKQADAVKSRTTDGKPATGEVRQLVEQVATLQTFVGAHPIPTLTNWQAVETSLGKLQQAFGLTP*
Ga0075355_11847372	3300014322	Natural And Restored Wetlands	KDDRNAAKKDVELLIKQAEAVKDRTNDGKPATAEVRQLVDQVARVQTFVSAHQIPGAMADWQAVQTSVGKVLQAFGLTE*
Ga0163163_117963792	3300014325	Switchgrass Rhizosphere	RFKDDIDNDKSLPKSEREIAKKDVEELIKLADAVKDRTNDGKSATAELRQLVEQAATVQTFIGAHPMSTLSNWQAAQTSLVKLRQAFGLPM*
Ga0157377_110051951	3300014745	Miscanthus Rhizosphere	KDKTILKPEKDIAKKDVEMLIKQADAVKSRTSDGKPATGEVRQVVEQVAKVQTFVDAHPIPTMTNWQAVQTSLGTLQQAFGLTP*
Ga0180090_10951431	3300014866	Soil	FPLPDGATPHRVNDKETAAHASAIATSADRFKSDLDKDKILPKPEKDAAKKDVEMLIKQADAVKSRTSDGKPATGEVRQLAEQVAKVQTFVDAHPSAAVTNWQSVQTSFAKLQQAFGLRP
Ga0157376_106231821	3300014969	Miscanthus Rhizosphere	YGGVFQLPEGAAIRRMNDKEVAGVAESLAGAADRFKNDINKDAALAKPDKDAAKKDVEVLAKQANSVKSRVSDGQPATAEVRQVIEQIAKIQTFVIAHPNTVVGNWQAVQTSSGKLQQAFGLMP*
Ga0157376_123581822	3300014969	Miscanthus Rhizosphere	ATFPLQEGATVRRINDNETAAAAGAVASAADRFKNNLDKSSTLSKDDKEAAKKDVELLIKQADDVKDRTNDDKPAPAEVRQLVEQVARVQTFVGAHQIPEAMTDWQSVKTSLGTVQQSFGLTQ*
Ga0132258_100712433	3300015371	Arabidopsis Rhizosphere	VQRLERKPPLRSRRRRTASRALDRDKTLAKADKDAAKKDVDLLVKQANAVKSRTSDGKPATGEVRQLVEQTAKLQTFVGAHPIPTMTNWEAVQTSLGKLQQAFGLTP*
Ga0132258_109224754	3300015371	Arabidopsis Rhizosphere	GDRFKDDIDHDKTLPKSESEAVKKDVEALVKLADAVKDRTNDGKPATAEMRQLVEQVARVETFIGRHAMPTLSNWQAVQTSVAKLRQAFGLPM*
Ga0132258_128161872	3300015371	Arabidopsis Rhizosphere	LAKPDRDAAKKDADVLIKQANAVKSRTSDGKLATAELRQLVEQVAKLQTFVGAHPLPTMTNWEAVQTSLEKLQRAFGLTP*
Ga0132258_139360321	3300015371	Arabidopsis Rhizosphere	LVLIRRREGPSACGQGNSVADRFKDEIDNDKTLPKSEREAAGKDVEVLIKLADAVKDRTNDGKPATAELRQLVEQVARVQTFIAMHPMTTLSNWQAVQTSLATLRQAFGLTT*
Ga0132256_1012425511	3300015372	Arabidopsis Rhizosphere	LPNGATVRRMNDKETAGYATAIATATDRFKSDLDKASTLAKPDRDAAKKDADVLIKQANAVKSRTSDGKLATAELRQVVDQVAKLQTFVGAHTIPTMTNWQAVQTSLEKLQQAFGLTP*
Ga0132256_1022905101	3300015372	Arabidopsis Rhizosphere	TATDRFKSDLDKASALAKPDRDAAKKDADVLIKQANAVKSRTSDGKLATAELRQLVEQVAKLQTFVGAHPIPTMTNWEAVQTSLGKLQRAFGLTP*
Ga0132257_1042615411	3300015373	Arabidopsis Rhizosphere	TFPLPDGATVRRMNDKETAGFATAIATAADHFKSDLDKASTIAKPDRDAAKKDAEVLIKQANAVKSRTSDGKLATAELRQLVEQIAKLQTFVEAHPIPTMTNWQAVQTSLGKLQQAFGATP*
Ga0132257_1045972351	3300015373	Arabidopsis Rhizosphere	TFPFPADAAVRRMNDKETANVASTIADAANRFKSDLDKDKTILKPEKDIAKKDVEMLIKQADAVKSRTSDGKPATGEVRQVVEQVAKVQTFVDAHPIPTMTNWQAVQTSLGKLQQAFGLTP*
Ga0132255_1011733492	3300015374	Arabidopsis Rhizosphere	MAAAANRLKSDLDKDKTLPKLEKDAAKKDFEALANLANTVKSRTNDGKPATGEVRQLMEQVAKIQIFIGSHPMPASATTLEAVHASLTKLQQAFGVTP*
Ga0132255_1033715322	3300015374	Arabidopsis Rhizosphere	ATAADRFKNDLDKDKTLPKAEKDAAKKDVELLIKQADAVKSRTTDGKPATGEVRQLVEQVAKLQTFVGAHPIPTMTNWQAVQASLGKLQQAFGLTP*
Ga0132255_1063125831	3300015374	Arabidopsis Rhizosphere	KTLPKSESEAAKKDVEALVKLADAVKDRTNDGKPATAEMRQLVEQVARVETFIGRHAMPTLSNWQAVQTSVAKLRQAFGLPM*
Ga0184632_104038481	3300018075	Groundwater Sediment	ETVATAAAIATAADRFKNDVDKDKTLPKPAKDAAKKDVELLIKQADAVKSRTSDGKPATGEVRQLVEQVAKLQTFVGAHPIPTMTNWQAVQTSLGKLQQAFGLTP
Ga0184612_101489631	3300018078	Groundwater Sediment	DKDKTLPKPAKDAAKKDVELLIKQADAVKSRTSDGKPATGEVRQLVEQVAKLQTFVGAHPIPTMTNWQAVQTSLGKLQQAFGLTP
Ga0184628_106787421	3300018083	Groundwater Sediment	AVASAADRFKDNLDKATTLSKNDKETAKKDVELLIKRADAVKDRTNDDKPATAEVRQLVEQVAVVQTFVGAHQIPAAMTDWQSLKTSLGTVQQAFGLPE
Ga0190265_125087251	3300018422	Soil	TTLAKPDKDAAKKDTELLIKQANAVKSRTSDGKPATGEVRQLVEQAARLQTFVAAHPIPTMANWQAVQKSLAQLQQAFRLTP
Ga0190270_101298972	3300018469	Soil	LKPEKDAAKKDVELLIKQADAVKSRTSDGKPATGEVRQLVEQVAKLQTFVGAHPIPTMTNWQAVQTSLAKLQQAFGLAP
Ga0190274_120386432	3300018476	Soil	YKNDLGKASTLPKPDREAAKKDIEALVTLANAIESRARKGKPATAEVRQLVEQTARVQTFVDAHPIPEAAANWQAVQASLGTLQQAFGLTK
Ga0190274_135926111	3300018476	Soil	AVAGAIGASADKVKNEIDKLPKPDKDAGKKEIELLIKQADVVKSRTGDGQPASSEVRQLVDQSTKVDAFITAHPLPTAANWQAVQASLGKLKQAFGLAP
Ga0193692_10073543	3300020000	Soil	RRSNDKEVAATAEAIATAADRFKDDLDKDKTLPKPDKEAAEKDVEMLKKQADAVKDRTSDGKPATGEVRQLIQQVAKVQTFIGAHPTTIMTNWQAVQTSLGKLQQAFGLTP
Ga0247785_10514491	3300022889	Soil	ANVASTIADAANRFKSDLDKDKTILKPEKDIAKKDVEMLIKQADAVKSRTSDGKPATGEVRQVVEQVAKVQTFVDAHPIPTMTNWQAVQTSLGTLQQAFGLTP
Ga0207656_104291232	3300025321	Corn Rhizosphere	DDIDNDKSLPKSEREIAKKDVEELIKLADAVKDRTNDGKSATAELRQLVEQAATVQTFIGAHPMSTLSNWQAAQTSLVKLRQAFGLPM
Ga0207680_100749451	3300025903	Switchgrass Rhizosphere	AAAIADAADRFKDDIDNDKSLPKSEREIAKKDVEELIKLADAVKDRTNDGKSATAELRQLVEQAATVQTFIGAHPMSTLSNWQAAQTSLVKLRQAFGLPM
Ga0207680_113169231	3300025903	Switchgrass Rhizosphere	FPLQEGATVRRINDNETAAAAGAVASAADRFKDNLDKASTLSKDDREAAKKDVELLIRQAEAVKDRTNDDKPATAEVRQLVEQVARVQTFVGAHQIPAAMTDWQSVKTSLGTVQQAFGLP
Ga0207645_104012611	3300025907	Miscanthus Rhizosphere	KETAGFATAIATAADRFKSDLDKASTLAKPDRDAVKKDADILIKQANAVKSRTSDGKLATAELRQLVEQVAKLQTFVGAHPIPTMTNWEAVQTSLGKLQQAFGLTP
Ga0207662_110429031	3300025918	Switchgrass Rhizosphere	ATAIATAADRFKSDLDKASTLAKPDRDAVKKDADILIKQANAVKSRTSDGKLATAELRQLVEQVAKLQTFVGAHPIPTMTNWEAVQTSLGKLQQAFGLTP
Ga0207644_107260951	3300025931	Switchgrass Rhizosphere	ADRFKNDLDKDKTLPKPEKDAAKKDVEMLIKQADAVKSRTTDGKPATGEVRQLVEQVATLQTFVGAHPIPTLTNWQAVETSLGKLQQAFGLTP
Ga0207690_113378241	3300025932	Corn Rhizosphere	IATAADRFKNDLDKDKTLPKAEKDAAKKDVELLIKQADAVKSRTTDGKPATGEVRQLVEQVATLQTFVGAHPIPTLTNWQAVETSLGKLQQAFGLTP
Ga0207690_115946291	3300025932	Corn Rhizosphere	ETAGFATAIATAADRFKSDLDKASTLAKPDRDAVKKDADILIKQANAVKSRTSDGKLATAELRQLVEQVAKLQTFVGAHPIPTMTNWEAVQTSLGKLQQAFGLTP
Ga0207709_104437382	3300025935	Miscanthus Rhizosphere	SPLRLVCTLSKDDREAAKKDVELLIKQAEAVKDRTNDDKPATAEVRQLVEQVAKVQTFVGAHQIPAAMTDWQSVKTSLGTVQQAFGLPE
Ga0207669_114832861	3300025937	Miscanthus Rhizosphere	MNDKDAVATAASIASAADRFKNDIDKDKTLPKPEKDAAKKDVELLIKQANAVKSRTSDGNPATAEMRQLAEQVAKLQTFVGAHPIPTMTNWQTVQTSLAKLQQGFGLAP
Ga0207689_114417821	3300025942	Miscanthus Rhizosphere	MNDKEVAGVAESLAAAADRFKNDINKDAALAKPDKDAAKKDVEVLAKQANSVKSRVSDGQPATAEVRQVIEQIAKIQTFVIAHPSTVVGNWQAVQTSSGKLQQAFGLVP
Ga0207639_116223001	3300026041	Corn Rhizosphere	DGATVRRMNDKETAGFATAIATAADRFKSDLDKASTLAKPDRDAVKKDADILIKQANAVKSRTSDGKLATAELRQLVEQVAKLQTFVGAHPIPTMTNWEAVQTSLGKLQQAFGLTP
Ga0207708_120145672	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	DKETANVASTIADAANRFKSDLDKDKTILKPEKDIAKKDVEMLIKQADAVKSRTSDGKPATGEVRQVVEQVAKVQTFVDAHPIPAMTNWRTVQTSLGKLQQAFGLTP
Ga0207702_114785181	3300026078	Corn Rhizosphere	CSAAMASAADRFTKEIDKDKTLQPPGKDAAKKDVELLIDLANDVKSRTGDGKLATGEMTQLVAQTAKVQTFVAAHPPASMTNWESVQASLGKLKQAFGLEP
Ga0207683_108165402	3300026121	Miscanthus Rhizosphere	TASIASAADRFKNDIDKDKTLPKPEKDAAKKDVELLIKQANAVKSRTSDGNPATAEMRQLAEQVAKLQTFVGAHPIPTMTNWQTVQTSLAKLQQGFGLAP
Ga0268265_102506581	3300028380	Switchgrass Rhizosphere	DKETANVASTIADAANRFKSDLDKDKTILKPEKDIAKKDVEMLIKQADAVKSRTSDGKPATGEVRQVVEQVAKVQTFVDAHPIPTMTNWQAVQTSLGTLQQAFGLTP
Ga0247828_104542882	3300028587	Soil	KETAATATAIATAADRFKNDLDKDKTLPKAETDAAKKDVELLIKQADAVKSRTTDGKPATGEVRQLVEQVATLQTFVGAHPIPTLTNWQAVETSLGKLQQAFGLTP
Ga0310888_100534492	3300031538	Soil	ANRFKSDLDKDKTILKPEKDIAKKDVEMLIKQADAVKSRTSDGKPATGEVRQVVEQVAKVQTFVDAHPIPTMTNWQAVQTSLGTLQQAFGLTP
Ga0310888_108302291	3300031538	Soil	PKAETDAAKKDVELLIKQADAVKSRTSDGKPATGEVRQLVEQVAKLQTFVGAHPIPTMTNWQAVQTSLGKLQQAFGLTP
Ga0310887_107088502	3300031547	Soil	LDKDKTLAKPEKDAAKKDLEVLIKQADAVKSRTSDGKPATGEVRQLVAQVAKLQTFVDAHPIPTMTNWQAVQTSVGKLQQAFGLTP
Ga0310886_106900811	3300031562	Soil	GRFKSDLDKAASLAKPDRDAGKKEADLLIKQANAVKSRTSGGELATGEMRQLVEQVAKLETFVGAHPIPVMTNWQAVQTTLQKLRQAFGLTM
Ga0310813_112082482	3300031716	Soil	KNDLDKDKTLPKAEKDAAKKDVELLIKQADAVKSRTTDGKPATGEVRQLVEQVATLQTFVGAHPIPTLTNWQAVETSLGKLQQAFGLTP
Ga0307468_1023854811	3300031740	Hardwood Forest Soil	TAIATAADRFKSDLNKATTLAKPDRDAAKKDADVLIKQANAVKSRTSDGKLATAELRQLVEQVAKLQTFVGAHPIPTMTNWEAVQTSLGKLQQAFGLTP
Ga0310907_103533151	3300031847	Soil	LPKAEKDAAKKDVELLIKQADAVKSRTTDGKPATGEVRQLVEQVATLQTFVGAHPIPTLTNWQAVETSLGKLQQAFGLTP
Ga0310900_100422743	3300031908	Soil	KDKTLPKAEKDAAKKDVELLIKQADAVKSRTTDGKPATGEVRQLVEQVATLQTFVGAHPIPTLTNWQAVETSLGKLQQAFGLTP
Ga0310884_105634131	3300031944	Soil	NDLDKDKTLPKAEKDAAKKDVELLIKQADAVKSRTTDGKPATGEVRQLVEQVATLQTFVGAHPIPTLTNWQAVETSLGKLQQAFGLTP
Ga0310903_104666052	3300032000	Soil	GRFKNDLGKEKTLPKPDLEAAKKDIDVLISQANAVKSRTSDGKPATGEVRQLVEQVAKVQAFVDAHQIPGALANWQAVQPSLVKLQQSFGLTK
Ga0310903_106556982	3300032000	Soil	ETAATATAIATAADRFKNDLDKDKTLPKAETDAAKKDVELLIKQADAVKSRTSDGKPATGEVRQLVEQVAKLQTFVGAHPIPTMTNWQAVQTSLGKLQQAFGLTP
Ga0307416_1001519371	3300032002	Rhizosphere	LKHLAEAYGATFPLPDGATVRRMNDKETAGFAAAIATATDRFKNDLDKASTLAKPDRDAAKKDADVLIKQANAVKSRTSDGKLATAELRQVVDQVTKLQTFVGAHPIPTMTNWEAVQTSLGKLQQPFGLTP
Ga0310897_102862581	3300032003	Soil	PFPDGATSRRVNDKETAATATAIATSAGRFKNDLDKDKTLPKPEKDAAKKDVELLIKQADTVKSRTTDGKPATGEVRQLVEQVAKLQTFVGAHPIPTMTNWQAVQASLGKLQQAFGLTE
Ga0310902_100464372	3300032012	Soil	ASTIADAANRFKSDLDKDKTILKPEKDIAKKDVEMLIKQADAVKSRTSDGKPATGEVRQVVEQVAKVQTFVDAHPIPTMTNWQAVQTSLGTLQQAFGLTP
Ga0310906_102977261	3300032013	Soil	NDKETAATATAIATAADRFKNDLDKDKTLPKAEKDAAKKDVELLIKQADAVKSRTTDGKPATGEVRQLVEQVATLQTFVGAHPIPTLTNWQAVETSLGKLQQAFGLTP
Ga0315912_106764533	3300032157	Soil	PFPAGGTTRRLNDKETAAAATAVADAANRFKSDLDKDKALAKPDKDAVKKDVEALVKQAGLVKSRTNEGKPATAEARALVEQVAKLQTFVGAHPGIPATNWQSLQAALGKVQQAFALTP
Ga0310810_105741471	3300033412	Soil	RRDPPNERQGAAGKDVEVLIKLADAVKDRTNDGKPATAELRQLVEQVARVQTFIAMHPMTTLSNWHAVQTSLATLRQAFGPTT
Ga0316625_1002325261	3300033418	Soil	GAAGAIGAAAGRFKNDLDNDRTLAKADRNAAKKDVDLLIKQADAVKSRTSAGKPATADMQQVVDQVAKLEGFVGSHPNTSATNWQAVRTSLDKLQQAFGVTP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087271

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences