Metagenome / Metatranscriptome Family F087262

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F087262
Family Type	Metagenome / Metatranscriptome
Number of Sequences	110
Average Sequence Length	76 residues
Representative Sequence	MKKDDKKLIHKALDGEANQSETKRLQARLESDGRIRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRMRKPKP
Number of Associated Samples	89
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.52 %
% of genes near scaffold ends (potentially truncated)	23.64 %
% of genes from short scaffolds (< 2000 bps)	82.73 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.182 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (9.091 % of family members)
Environment Ontology (ENVO)	Unclassified (27.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.182 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.88% β-sheet: 0.00% Coil/Unstructured: 47.12%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF08281	Sigma70_r4_2	40.91
PF05746	DALR_1	12.73
PF09527	ATPase_gene1	6.36
PF00119	ATP-synt_A	1.82
PF13414	TPR_11	0.91
PF00430	ATP-synt_B	0.91
PF02874	ATP-synt_ab_N	0.91
PF02568	ThiI	0.91
PF13385	Laminin_G_3	0.91
PF04542	Sigma70_r2	0.91
PF03030	H_PPase	0.91
PF08529	NusA_N	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	12.73
COG0751	Glycyl-tRNA synthetase, beta subunit	Translation, ribosomal structure and biogenesis [J]	12.73
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	1.82
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.91
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.91
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.91
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.91
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.91
COG0711	FoF1-type ATP synthase, membrane subunit b or b'	Energy production and conversion [C]	0.91
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.91
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.91
COG3808	Na+ or H+-translocating membrane pyrophosphatase	Energy production and conversion [C]	0.91
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.18 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	57.27 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.82 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	57.27 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	3.64 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.82 %
Unclassified	root	N/A	1.82 %

Name	Rank	Taxonomy	Distribution
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	57.27 %
Ignavibacteriae	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae	3.64 %
Unclassified	root	N/A	1.82 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.91 %

Name	Rank	Taxonomy	Distribution
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	57.27 %
Ignavibacteria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria	3.64 %
Unclassified	root	N/A	1.82 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.91 %

Name	Rank	Taxonomy	Distribution
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	57.27 %
Ignavibacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales	3.64 %
Unclassified	root	N/A	1.82 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.91 %

Name	Rank	Taxonomy	Distribution
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	57.27 %
Ignavibacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae	3.64 %
Unclassified	root	N/A	1.82 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.91 %

Name	Rank	Taxonomy	Distribution
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	57.27 %
Ignavibacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium	3.64 %
Unclassified	root	N/A	1.82 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.91 %

Name	Rank	Taxonomy	Distribution
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	57.27 %
Ignavibacterium album	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album	3.64 %
Unclassified	root	N/A	1.82 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.91 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0927510	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	565	Open in IMG/M
2228664022\|INPgaii200_c0929674	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	637	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101876887	All Organisms → cellular organisms → Bacteria	5330	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101877043	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1904	Open in IMG/M
3300000953\|JGI11615J12901_11336360	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300003324\|soilH2_10389657	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300004463\|Ga0063356_103895830	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300005332\|Ga0066388_103806753	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album	770	Open in IMG/M
3300005340\|Ga0070689_102135110	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	513	Open in IMG/M
3300005440\|Ga0070705_100496291	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300005440\|Ga0070705_101211051	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	622	Open in IMG/M
3300005467\|Ga0070706_101820935	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005468\|Ga0070707_101704071	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album	597	Open in IMG/M
3300005526\|Ga0073909_10596449	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album	545	Open in IMG/M
3300005529\|Ga0070741_10187845	All Organisms → cellular organisms → Bacteria	2026	Open in IMG/M
3300005538\|Ga0070731_10017585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	5029	Open in IMG/M
3300005538\|Ga0070731_10228566	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300005541\|Ga0070733_10393102	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300005545\|Ga0070695_101649801	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	536	Open in IMG/M
3300005549\|Ga0070704_100827567	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → Ignavibacteriales → Ignavibacteriaceae → Ignavibacterium → Ignavibacterium album	829	Open in IMG/M
3300005549\|Ga0070704_101330859	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	658	Open in IMG/M
3300005618\|Ga0068864_101764529	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300005764\|Ga0066903_105503042	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005829\|Ga0074479_10683694	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	772	Open in IMG/M
3300005829\|Ga0074479_11037725	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300005836\|Ga0074470_11271842	All Organisms → cellular organisms → Bacteria	35789	Open in IMG/M
3300006031\|Ga0066651_10207595	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300006046\|Ga0066652_100688304	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300006358\|Ga0068871_100735176	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300006791\|Ga0066653_10509847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	609	Open in IMG/M
3300006844\|Ga0075428_100423736	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300006845\|Ga0075421_100481263	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300006845\|Ga0075421_101655055	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300006854\|Ga0075425_100811604	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1072	Open in IMG/M
3300006881\|Ga0068865_100396568	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300007788\|Ga0099795_10489905	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	572	Open in IMG/M
3300009012\|Ga0066710_100497034	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1837	Open in IMG/M
3300009094\|Ga0111539_10080572	All Organisms → cellular organisms → Bacteria	3830	Open in IMG/M
3300009100\|Ga0075418_10548692	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1242	Open in IMG/M
3300009100\|Ga0075418_12432895	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	571	Open in IMG/M
3300009147\|Ga0114129_11195028	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	947	Open in IMG/M
3300009609\|Ga0105347_1340770	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	637	Open in IMG/M
3300009651\|Ga0105859_1082184	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	849	Open in IMG/M
3300009678\|Ga0105252_10130841	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1031	Open in IMG/M
3300010047\|Ga0126382_10600160	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	906	Open in IMG/M
3300010359\|Ga0126376_11713893	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	664	Open in IMG/M
3300010391\|Ga0136847_10499539	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	501	Open in IMG/M
3300010398\|Ga0126383_10469631	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1311	Open in IMG/M
3300010399\|Ga0134127_10200945	All Organisms → cellular organisms → Bacteria	1853	Open in IMG/M
3300010400\|Ga0134122_10192231	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300010400\|Ga0134122_10470356	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1130	Open in IMG/M
3300010403\|Ga0134123_10318941	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1387	Open in IMG/M
3300010403\|Ga0134123_10447287	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1200	Open in IMG/M
3300010403\|Ga0134123_10535558	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1111	Open in IMG/M
3300010938\|Ga0137716_10180818	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1326	Open in IMG/M
3300011120\|Ga0150983_13740946	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	662	Open in IMG/M
3300011429\|Ga0137455_1191152	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	611	Open in IMG/M
3300011436\|Ga0137458_1123532	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	759	Open in IMG/M
3300011439\|Ga0137432_1149583	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	749	Open in IMG/M
3300011441\|Ga0137452_1200630	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	677	Open in IMG/M
3300011445\|Ga0137427_10449377	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	532	Open in IMG/M
3300012212\|Ga0150985_107688494	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	828	Open in IMG/M
3300012231\|Ga0137465_1250703	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	523	Open in IMG/M
3300012469\|Ga0150984_100749947	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300012944\|Ga0137410_10006954	All Organisms → cellular organisms → Bacteria	7681	Open in IMG/M
3300012948\|Ga0126375_11625311	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	557	Open in IMG/M
3300015245\|Ga0137409_11523544	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	518	Open in IMG/M
3300015371\|Ga0132258_13804623	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1028	Open in IMG/M
3300015374\|Ga0132255_102687806	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	761	Open in IMG/M
3300015374\|Ga0132255_103576590	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	661	Open in IMG/M
3300017961\|Ga0187778_10036602	All Organisms → cellular organisms → Bacteria	2998	Open in IMG/M
3300018468\|Ga0066662_11999575	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	607	Open in IMG/M
3300019360\|Ga0187894_10374686	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	638	Open in IMG/M
3300019362\|Ga0173479_10414211	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	654	Open in IMG/M
3300019487\|Ga0187893_10000701	All Organisms → cellular organisms → Bacteria	85868	Open in IMG/M
3300021432\|Ga0210384_10014910	All Organisms → cellular organisms → Bacteria	7688	Open in IMG/M
3300024219\|Ga0247665_1061581	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	535	Open in IMG/M
3300025324\|Ga0209640_10834663	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	723	Open in IMG/M
3300025910\|Ga0207684_10610849	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300025922\|Ga0207646_10710698	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	898	Open in IMG/M
3300025936\|Ga0207670_11462684	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	581	Open in IMG/M
3300025938\|Ga0207704_11865109	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	517	Open in IMG/M
3300026075\|Ga0207708_10407960	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1125	Open in IMG/M
3300026095\|Ga0207676_11538531	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	662	Open in IMG/M
3300027815\|Ga0209726_10162579	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1227	Open in IMG/M
3300027857\|Ga0209166_10013252	All Organisms → cellular organisms → Bacteria	5278	Open in IMG/M
3300027869\|Ga0209579_10013536	All Organisms → cellular organisms → Bacteria	4840	Open in IMG/M
3300027907\|Ga0207428_10051868	All Organisms → cellular organisms → Bacteria	3277	Open in IMG/M
3300030997\|Ga0073997_12237993	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	821	Open in IMG/M
3300031562\|Ga0310886_10949678	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	549	Open in IMG/M
3300031576\|Ga0247727_10055375	All Organisms → cellular organisms → Bacteria	4752	Open in IMG/M
3300031576\|Ga0247727_10252574	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1544	Open in IMG/M
3300031716\|Ga0310813_10000250	All Organisms → cellular organisms → Bacteria	38512	Open in IMG/M
3300031716\|Ga0310813_10002317	All Organisms → cellular organisms → Bacteria	11539	Open in IMG/M
3300031716\|Ga0310813_10015503	All Organisms → cellular organisms → Bacteria	5064	Open in IMG/M
3300031716\|Ga0310813_10149961	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1874	Open in IMG/M
3300031716\|Ga0310813_10154522	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1849	Open in IMG/M
3300031716\|Ga0310813_10244048	All Organisms → cellular organisms → Bacteria	1493	Open in IMG/M
3300031716\|Ga0310813_10890099	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	806	Open in IMG/M
3300031912\|Ga0306921_12617309	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	521	Open in IMG/M
3300032001\|Ga0306922_10248745	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1911	Open in IMG/M
3300032157\|Ga0315912_10626555	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	857	Open in IMG/M
3300032261\|Ga0306920_101142759	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1128	Open in IMG/M
3300032261\|Ga0306920_104357393	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	508	Open in IMG/M
3300032421\|Ga0310812_10017973	All Organisms → cellular organisms → Bacteria	2455	Open in IMG/M
3300033805\|Ga0314864_0012000	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1698	Open in IMG/M
3300034268\|Ga0372943_0177205	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300034818\|Ga0373950_0053378	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	798	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.91%
Host-Associated	Host-Associated	19.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.18%
Plants	Host-Associated → Plants	19.09%
Aquatic	Environmental → Aquatic	12.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.55%
Sediment	Environmental → Aquatic → Sediment	10.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.18%
Cave	Environmental → Terrestrial → Cave	3.64%
Freshwater	Environmental → Aquatic → Freshwater	1.82%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.91%
Roots	Host-Associated → Plants → Roots	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.27%
Loam	Environmental → Terrestrial → Soil → Loam	14.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.18%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.55%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.82%
Lake	Environmental → Aquatic → Freshwater → Lake	0.91%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.91%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.91%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.55%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	3.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.91%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.91%
Neutral	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral	0.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.91%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.91%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.91%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.09%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.18%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	7.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.27%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.64%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	2.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.82%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.82%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	1.82%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.91%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.91%
Hot Spring Fe-Si Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Hot Spring Fe-Si Sediment	0.91%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.91%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.91%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.91%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.91%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.91%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.91%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010938	Sediment microbial community from Chocolate Pots hot springs, Yellowstone National Park, Wyoming, USA. Combined Assembly of Gp0156111, Gp0156114, Gp0156117	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012231	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09275102	2228664022	Soil	MKKDDKKLIHKALDGETNQSETKKLQAKLEADGRMRSEFELLKKVVKDTTKIRIDVPKDFTQNVLRETQRRQKPK
INPgaii200_09296741	2228664022	Soil	KKLIHKALDGETSQSETKKLHQKLESDGRMRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRIRKPKP
INPhiseqgaiiFebDRAFT_1018768874	3300000364	Soil	MKKDDKKLIHKALDGETNQSETKKLQAKLEADGRMRSEFELLKKVVKDTTKIRIDVPKDFTQNVLRETQRRQKPK*
INPhiseqgaiiFebDRAFT_1018770434	3300000364	Soil	MAMKKDDKKLIHKALDGETSQSETKKLHQKLESDGRMRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRIRKPKP*
JGI11615J12901_113363601	3300000953	Soil	MTMKKDDKKLIHKALDGEANQSETKRLQEKLQSDGRIRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRMRKPKP*
soilH2_103896572	3300003324	Sugarcane Root And Bulk Soil	MKKDDKKLIHKALDGEANQSETKKLRAKMESDGRVRSEFEQLKQVVKDTTRIRVDVPADFTKKVLDETKRIPKPKP*
Ga0063356_1038958302	3300004463	Arabidopsis Thaliana Rhizosphere	MKKDDKKLIHKALDGEANQSETKKLQAKLEADGRMRSEFEQLKSVVKDTTRIRIDVPKDFTKKVLDETKRMHKPKP*
Ga0066388_1038067531	3300005332	Tropical Forest Soil	MAMKKDDKKLIHKALDGEANQTETKKLQAKMEADGRVRSEFEQLKQVVKDTTRIRVDVPPDFTKKVLDETKRIRKPKA*
Ga0070689_1021351102	3300005340	Switchgrass Rhizosphere	MTMKKDDKKLIHKALDGEANQSETKRLNERLQSDGRVRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRIRKPKP*
Ga0070705_1004962911	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTMKKDDKKLIHKALDGEANQSETKRLNERLQSDGRVRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRMRKPKP*
Ga0070705_1012110511	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKKDDKKLIHKALDGETNQSETKRLQERLQSDGRMRSEFEQLKQVVKDTTRIRIEVPKDFTKNVLDETRRIKRPKP*
Ga0070706_1018209351	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MMKRNEKKLLHKAIDGEVTQSETRRLHRRLETDGRARAEFEQLKKVVKDTEKVRINVPPDFTKKVMSETRKIKL
Ga0070707_1017040711	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MMKRNEKKLLHKAIDGEVTQSETRRLHRRLETDGRARAEFEQLKKVVKDTEKVRINVPPDFTKKVMSETRKIKLSQPPEA*
Ga0073909_105964491	3300005526	Surface Soil	MKKNDKKLIHKALDGETNQSETKKLQAKLEADGRMRSEFELLKKVVKDTTRIRIDVPKDFTQNVLKETQRRQKPKD*
Ga0070741_101878452	3300005529	Surface Soil	MKKHDKKLIHKALDGETSQSETKRLHAKMEADGRMRSEFELLKKVVKDTTRIRIEVPKDFTQNVLRETQKRTKPKS*
Ga0070731_100175854	3300005538	Surface Soil	MKKHDKKLIHKALDGETSQSETKRLQAKLQTDGRMRSEFELLKKVMKDTTKIRIEVPKDFTQNVLRETQRREKPKG*
Ga0070731_102285663	3300005538	Surface Soil	MKKHDKKLIHKALDGETSQSETKRLHAKMQSDGRMRSEFELLKKVMKDTTKIRIEVPKDFTQNVLRETQKRTKPKP*
Ga0070733_103931021	3300005541	Surface Soil	VKKDDKKLIHRALDGETNQSETKRLRQKLETDGRMRSEFEQLKKVVKDTTRIKIEVPRDFTRKVLDETKRRAKP*
Ga0070695_1016498012	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MAMKKDDKKLIHKALDGEANQSETKRLQEKLQSDGRIRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRIRKPKP*
Ga0070704_1008275671	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MKKDDKRLIHKALDGEANQSETKKLQQKMEADGRVRSEFEQLKQVVKDTTRIRVDVPPDFTKKVLDETRRIKKPKP*
Ga0070704_1013308591	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAMKKDDKKLIHKALDGEASQSETKRLQEKLASDGRVRSEFEQLKRVVKDTTKIRIDVPPDFTKNVMDETKRIRKPKP*
Ga0068864_1017645292	3300005618	Switchgrass Rhizosphere	MKKHDKKLIHKALDGEANQTETKKLHAKLESDGRMRSEFELLKKVVKDTTRIRIDVPRNFTENVLRETARREKPKP*
Ga0066903_1055030422	3300005764	Tropical Forest Soil	MKKDDKKLIHKALDGEANQSETKKLRAKMEADGRVRSEFEQLKQVVKDTTRIRVDVPADFTKKVLDETKRIQKPKP*
Ga0074479_106836942	3300005829	Sediment (Intertidal)	MKKDDKKLIHKALDGEANTSETKRLQAKLEADGRMRSEFEQLKKVVKDTTRVRIEVPQDFTKKVLEETRRIKRPKA*
Ga0074479_110377252	3300005829	Sediment (Intertidal)	MTKRDEKKLLHRAIDGEATQSETKRLQRRLETDGKTRAEFEQLKQVVKDTEKIRIDVPPDFTKKVMNETTKLRPPKPPRA*
Ga0074470_1127184219	3300005836	Sediment (Intertidal)	VKKHDKKLIHKALDGETSQSETKRLKAKLESDGRMRSEFELLKKVVKDTTKIRIEVPRNFTENVLRETQRREKPKA*
Ga0066651_102075952	3300006031	Soil	MKKDDKRLIHKALDGEANQSETKKLRLKMETDGRVRSEFEQLKQVVKDTTRIRVDVPPDFTKKVLDETKRIRKPKP*
Ga0066652_1006883042	3300006046	Soil	MKKDDKKLIHKALDGEANQSETKKLRLKMETDGRVRSEFEQLKQVVKDTTRIRVDVPPDFTKKVLDETKRIRKPKP*
Ga0068871_1007351762	3300006358	Miscanthus Rhizosphere	MKKDDKKLIHKALDGEANQSETKKLRLKMETDGRVRSELEQLKQVVKDTTRIRVDVPPDFTKKVLDETKRLRKPKP*
Ga0066653_105098471	3300006791	Soil	MKKDDKKLIHKALDGEANQSETKKLQQKMETDGRVRSEFEQLKQVVKDTTRIRVDVPPDFTKKVLDETRRI
Ga0075428_1004237362	3300006844	Populus Rhizosphere	MKKDDKKLIHKALDGEANQSETKKLQQKLEADGRMRSEFEQLKQVVKDTTRIRIDVPQDFTKKVLDETKRMRKPKP*
Ga0075421_1004812634	3300006845	Populus Rhizosphere	MKKDDKKLIHKALDGEANQSETKRLNQKLETDGRMRSEFEQLKRVVKDTTRIRIDVPQDFTK
Ga0075421_1016550552	3300006845	Populus Rhizosphere	MTMKKDDKKLIHKALDGEANQSETKRLQEKLQSDGRIRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRIRKPKP*
Ga0075425_1008116041	3300006854	Populus Rhizosphere	GEANQSETKKLQQKMEADGRVRSEFEQLKKVVKDTTKIRIDVPADFTKNVMDETKRIRKPKP*
Ga0068865_1003965682	3300006881	Miscanthus Rhizosphere	MAMKKDDKKLIHKALDGEANQSETKRLNERLESDGRVRSEFEQLKKVVKDTTKIRIEVPPDFTKNVMSETKRLRKPKL*
Ga0099795_104899052	3300007788	Vadose Zone Soil	MAMKKDDKKLIHKALDGEANQSETKRLQAKLEADGRMRSEFEQLKKVVKDTTKIRIEVPQDFTKKVLDETRRM*
Ga0066710_1004970341	3300009012	Grasslands Soil	MKKDDKRLLHRALDGEVNQSETKRLQQKLEADGRMRSEYEQLKKVVKDTTRVRVEVPPDFTKKVLEETRRIKRPKP
Ga0066710_1034612731	3300009012	Grasslands Soil	MMKRDEKKLLHRAIDGEATQSETRRLHRRLEADGKARAEFEQLKKVVKDTEKIRIDVPPDFTKKVMSETRKLRPPQIPKP
Ga0111539_100805722	3300009094	Populus Rhizosphere	VKNPGAGVDRNQGEDYTMKKDDKKLIHKALDGEANQSETKRLQAKLESDGRMRSEFEQLKQVVKDTTRIRIDVPQDFTKKVLDETKRMRKPKS*
Ga0075418_105486921	3300009100	Populus Rhizosphere	GDTMKKDDKKLIHKALDGEANQSETKKLQQKLEADGRMRSEFEQLKQVVKDTTRIRIDVPQDFTKKVLDETKRMRKPKP*
Ga0075418_124328952	3300009100	Populus Rhizosphere	MKKDDKKLIHKALDGEANQSETKKLQQKLEADGRMRSEFEQLKQVVKDTTRIRIDVPQDFTKKVLDETK
Ga0066709_1010259252	3300009137	Grasslands Soil	MMKRDEKKLLHRAIDGEATQSETRRLHRRLEADGKARAEFEQLKKVVKDTEKIRIDVPPDFTKKVMSETRKLRPPQIPKP*
Ga0114129_111950281	3300009147	Populus Rhizosphere	MKKDDKRLIHKALDGEANQSETKKLQQKMEADGRVRSEFEQLKQVVKDTTRIRVDVPPDFTKK
Ga0105347_13407701	3300009609	Soil	DRNQGEGDTMKKDDKKLIHKALDGEANQSETKRLREKLETDGRMRSEFEQLKQVVKDATRIRIDVPQDFTKKVLDETKRMRKPKP*
Ga0105859_10821842	3300009651	Permafrost Soil	VKKHDKKLIHKALDGETSQSETKRLKAKLEADGRMRSEFELLKKVVKDTTKIRIDVPQDFTQKVLRETQRREKPKA*
Ga0105252_101308411	3300009678	Soil	VDVDRNQGEGDTMKKDDKKLIHKALDGEANQSETKRLREKLETDGRMRSEFEQLKQVVKDTTRIRIDVPQDFTKKVLDETKRMRKPKP*
Ga0126382_106001601	3300010047	Tropical Forest Soil	MAMKKDDKKLIHKALDGEASQSETKRLNAKLESDGRMRSEFEQLKRVVKDTTKIRIDVPPDFTKNVMNETKRIRKPKP*
Ga0126376_117138931	3300010359	Tropical Forest Soil	DKRLIHKALDGEANQSETKKLQAKMDADGRVRSEFEQLKQVVKDTTRIRVDVPADFTKKVLDETKRLRKPKA*
Ga0136847_104995392	3300010391	Freshwater Sediment	MKKDDKKLIHKALDGEANTSETKRLQAKLQVDGRMRSEFEQLKKVVKDTTRIRIEVPQDFTKKVLEETRRIKRPKA*
Ga0126383_104696311	3300010398	Tropical Forest Soil	MAMKKDDKKLIHKALDGETNQSETKRLQEKLESDGRIRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMNETRRMKKPKS*
Ga0134127_102009452	3300010399	Terrestrial Soil	MAMKKDDKRLIHKALDGEANQSETKKLNAKMEADGRVRSEFEQLKQVVKDTTRIRVDVPPDFTKKVLDETKRIRKPKD*
Ga0134122_101922312	3300010400	Terrestrial Soil	MKKDDKKLIHKALDGEANQSETKKLQQKMEADGRVRSEFEQLKKVVKDTTRIRVDVPPDFTKKVLDETRRMRKPKP*
Ga0134122_104703561	3300010400	Terrestrial Soil	MTMKKDDKKLIHKALDGEANQSETKRLNERLQSDGRVRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMSETKRL
Ga0134123_103189412	3300010403	Terrestrial Soil	MAMKKDDKKLIHKALDGEANQSETKRLNERLDSDGRVRSEFEQLKKVVKDTTKIRIEVPPDFTKNVMSETKRLRKPKL*
Ga0134123_104472872	3300010403	Terrestrial Soil	MAMKKDDKKLIHKALDGEASQSETKRLQEKLASDGRVRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRIRKPKP*
Ga0134123_105355583	3300010403	Terrestrial Soil	MKKDDKKLIHKALDGEANQSETKKLHQKMEADGRMRSEFEQLKRVVKDTTRIRVDVPPDFTKKVLD
Ga0137716_101808182	3300010938	Hot Spring Fe-Si Sediment	VKKDDKKLLHRALDGEVSRSETRRLRRALREDGRARVEFEQLRKVVKDTERIKILPPQDFTRRVLEETRKIRPPRPR*
Ga0150983_137409461	3300011120	Forest Soil	MAKRDEKKLLHKAIDGEASQAETTRLRRRLETDGKARAEFEQLKQVVKDTEKIRIDVPPDFTRKVMSETRKIRRPAPPKA*
Ga0137455_11911522	3300011429	Soil	MKKDDKKLIHKALDGEANQSETKKLLQKMEEDGRVRSEFEQLKKVVKDTTRIRVDVPPDFTKKVLDETRRMRKPKP*
Ga0137458_11235322	3300011436	Soil	MKKDDKKLIHKALDGEANSSETKRLQAKLETDGRMRSEFEQLQKVVKETTRVRIEVPRDFTKKVLDETRRMKRPKP*
Ga0137432_11495832	3300011439	Soil	MKKDDKKLIHKALDGEANQSETKRLQARLESDGRIRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRMRKPKP*
Ga0137452_12006302	3300011441	Soil	MTMKKDDKKLIHKALDGEANQSETKRLLAKLESDGRIRSEFEQLKKVVKDTTKIRIEVPPDFTKNVMN
Ga0137427_104493772	3300011445	Soil	MAMKKDDKKLIHKALDGEASQSETKRLQEKLASDGRVRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRI
Ga0150985_1076884942	3300012212	Avena Fatua Rhizosphere	MKKHDKKLIHKALDGEANQTETKKLHAKLESDGRMRSEFELLKKVVKDTTRIRIEVPRNFTENVLKETQRREKRGRIFGLKNK*
Ga0137465_12507031	3300012231	Soil	MTMKKDDKKLIHKALDGEANQSETKRLLAKLESDGRIRSEFEQLKKVVKDTTKIRIEVPPDFTKNVMNETKRMRKPKP*
Ga0150984_1007499472	3300012469	Avena Fatua Rhizosphere	MKKHDKKLIHKALDGEANQTETKKLHAKLESDGRMRSEFELLKKVVKDTTRIRIDVPRNFTENVLRETQRREKPKP*
Ga0137410_1000695410	3300012944	Vadose Zone Soil	MKKDDKKLIHKALDGEASQSETKKLQEKLQSDGRMRSEFELLKKVVKDTTRIKIDVPQNFTQKVLSETTRRQKPKA*
Ga0126375_116253112	3300012948	Tropical Forest Soil	MAMKKDDKKLIHKALDGETNQSETKRLREKLESDGRIRSEFEQLKQVVKDTTKIRIDVPPDFTKNVMNETKRIRKPKP*
Ga0137409_115235442	3300015245	Vadose Zone Soil	MKKDDKKLIHKALDGEANQSETKKLQQKMEEDGRVRSEFEQLKQVVKDTTRIRVDVPPDFTKKVLDETRRIRRPKA*
Ga0132258_138046232	3300015371	Arabidopsis Rhizosphere	MAMKKDDKKLIHKALDGEASQSETKRLQEKLASDGRVRSEFEQLKKVVKDTTKIRIDVPADFTKNVMDETKRIRKPKP*
Ga0132255_1026878062	3300015374	Arabidopsis Rhizosphere	MKKDDKKLIHKALDGEANQSETKKLRAKMESDGRVRSEFEQLKQVVKDTERIRVDVPADFTKKVLDETKRIPKPKS*
Ga0132255_1035765902	3300015374	Arabidopsis Rhizosphere	MKKDDKKLIHKALDGEANQSETKKLQQKLETDGRMRSEFEQLKRVVKDTTRIRIDVPQDFTRKVLDETKRRTKPKP*
Ga0187778_100366027	3300017961	Tropical Peatland	MAKRHEKKLLHKAIDGEATQAETTRLRKRLETDGKARAEFEQLKQVVKGTEKIRIDVPPDFTEKVMSETRKL
Ga0066662_119995751	3300018468	Grasslands Soil	MKKDDKRLLHRALDGEVNQSETKRLQQKLEADGRMRSEYEQLKKVVKDTTRIRIDVPQDFTQKVLRETQRREKSKS
Ga0187894_103746861	3300019360	Microbial Mat On Rocks	MTKRDEKKLLHKAIDGEASEAETTRLRRKLQSDGKTRAEFEQFKNVVKDTEKVRIDVPPDFTRKVMSETRKIRRPDPPKA
Ga0173479_104142112	3300019362	Soil	VKNPGAGVDRNQGEDDTMKKDDKKLIHKALDGEANQSETKRLQAKLESDGRMRSEFEQLKRVVKDTTRIRVDVPPDFTKKVLDETKRMHKPKP
Ga0187893_1000070114	3300019487	Microbial Mat On Rocks	MKKDEKKLIHKAIDGEITKSETRRLHRALREDGKARSEFEQLKKIVKDTDRVRIDVPQDFTRKVLDQARRQSPPPPG
Ga0210384_100149104	3300021432	Soil	MAKRDEKKLIHKAIDGEASQAETTRLRRRLETDGKARAEFEQLKQVVKDTEKIRIDVPPDFTRKVMSETRKLRRPAPPKA
Ga0247665_10615811	3300024219	Soil	MPKKDEKKILHRAIDGEATQAETTRLHKRLQSDGKVRAEFEQLKQVVKDTEKVKIDVPANFTEKV
Ga0209640_108346631	3300025324	Soil	MTKKDEKKLLHRAIDGEATQSETKRLHRRLETDGKARAEFEQLKQVVKDTEKIRIDVPPDFTKKVLSETTKLRPPKPPRP
Ga0207684_106108491	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MMKRNEKKLLHKAIDGEVTQSETRRLHRRLETDGRARAEFEQLKKVVKDTEKVRINVPPDFTKKVMSETRKIKLSQPPEA
Ga0207646_107106982	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKKDDKRLIHKALDGEANQSETKKLQQKMEADGRVRSEFEQLKQVVKDTTRIRVDVPPDFTKKVLDETRRIKKPKP
Ga0207670_114626842	3300025936	Switchgrass Rhizosphere	MKKDDKRLIHKALDGEANQSETKRLQEKLQSDGRIRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRIRKPKP
Ga0207704_118651091	3300025938	Miscanthus Rhizosphere	MAMKKDDKKLIHKALDGEANQSETKRLNERLESDGRVRSEFEQLKKVVKDTTKIRIEVPPDFTKN
Ga0207708_104079603	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MAMKKDDKKLIHKALDGEANQSETKRLNERLQSDGRVRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRMRKPKP
Ga0207676_115385311	3300026095	Switchgrass Rhizosphere	MKKHDKKLIHKALDGEANQTETKKLHAKLESDGRMRSEFELLKKVVKDTTRIRIDVPRNFTENVLRETARREKPKP
Ga0209726_101625792	3300027815	Groundwater	MTKRDEKKLLHRAIDGEVTQSETKRLQRRLETDGKVRAEFEQLKQVVKDTEKIRIDVPPDFTRKVMSETTRLRPPKPPRA
Ga0209166_1001325210	3300027857	Surface Soil	MKKDDKKLIHKALDGETSQSETKRLKAKLEVDGRMRSEFELLKKVMKDTTKIRIDVPKDFTQNVLKETQRRQ
Ga0209579_100135364	3300027869	Surface Soil	MKKHDKKLIHKALDGETSQSETKRLQAKLQTDGRMRSEFELLKKVMKDTTKIRIEVPKDFTQNVLRETQRREKPKG
Ga0207428_100518682	3300027907	Populus Rhizosphere	MKKDDKKLIHKALDGEANQSETKRLQAKLESDGRMRSEFEQLKQVVKDTTRIRIDVPQDFTKKVLDETKRMRKPKS
Ga0073997_122379932	3300030997	Soil	MKKDDKKLIHKALDGEANQSETKKLLQKMEADGRVRSEFEQLKQVVKDTTRIRVDVPPDFTKKV
Ga0310886_109496781	3300031562	Soil	MAMKKDDKKLIHKALDGEANQSETKRLNERLESDGRVRSEFEQLKKVVKDTTKIRIEVPPDFTKNVMSETKRLRKPKP
Ga0247727_100553752	3300031576	Biofilm	MKKDEKKLIHKAIDGEITKSETRRLHRKLETDGKARSEFEQLKQIVKDTDRLKIDVPQDFRQKVLDQARRLNPPPQA
Ga0247727_102525742	3300031576	Biofilm	MTKKDEKKLLHKAIDGEATQSETKRLQRRLETDGKARAEFEQLKQVVKDTEKIRIDVPPDFTKKVLSETTKLRPPKPPRA
Ga0310813_1000025030	3300031716	Soil	MKKDDKKLIHKALDGEANQSETKKLRAKMESDGRVRSEFEQLKQVVKDTERIRVDVPADFTKKVLDETKRIPKPKS
Ga0310813_1000231710	3300031716	Soil	MTMKKDDKKLIHKALDGEANQSETKRLNERLQSDGRVRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRMRKPKP
Ga0310813_100155032	3300031716	Soil	MKKDDKKLIHKALDGEANQSETKKLRQKMEEDGRVRSEFEQLKQVVKDTTRIRVDVPADFTKKVLDETKRIRKPKP
Ga0310813_101499614	3300031716	Soil	MAMKKDDKKLIHKALDGEASQSETKRLNQKLEADGRMRSEFEQLKKVVKDTTKIRIDVPPDFTKNVLDETKRIRKPKP
Ga0310813_101545223	3300031716	Soil	MTMKKDDKKLIHKALDGEANQSETKRLQEKLQSDGRIRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRMRKPKP
Ga0310813_102440482	3300031716	Soil	MKKHDKKLIHKALDGEANQTETKRLHAKLESDGRMRSEFELLKKVVKDTTRIRIEVPQNFTEKVLRETQRREKPKP
Ga0310813_108900992	3300031716	Soil	MTMKKDDKKLIHKALDGEANQSETKRLNERLESDGRVRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMNETKRLRKPK
Ga0306921_126173092	3300031912	Soil	MKKHDKKLIHKALDGETSQSETKRLNAKLEADGRMRSEFELLKKVMKDTTKIRIEVPKDFTQNVLR
Ga0306922_102487451	3300032001	Soil	MKKHDKKLIHKALDGETSQSETKRLNAKLEADGRMRSEFELLKKVMKDTTKIRIEVPKDFTQNVLRETARRTKPKS
Ga0315912_106265551	3300032157	Soil	REGQEQEGSRLMKKHDKKLIHKALDGETSESETKKLQAKLDNDGRMRSEFELLKKVVKDTTRVRIDVPKDFTQNVLKETQRRQKPKP
Ga0306920_1011427592	3300032261	Soil	MKKDDKKLIHKALDGEANQSETRRLNQRLESDGRVRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMNETKRIRKPKP
Ga0306920_1043573931	3300032261	Soil	MKKHDKKLIHKALDGETSQSETKRLNAKLEADGRMRSEFELLKKVMKDTTKIRIEVPKDFTQNVLRE
Ga0310812_100179735	3300032421	Soil	MTMKKDDKKLIHKALDGEANQSETKRLNERLQSDGRVRSEFEQLKKVVKDTTKIRIDVPPDFTKNVMDETKRMRK
Ga0314864_0012000_1350_1580	3300033805	Peatland	MKKHDKKLIHKALDGETSQSETKRLNAKLQADGRMRSEFELLKKVVKDTTKIRIEVPKDFTQNVLRETQRRQKPKA
Ga0372943_0177205_1055_1285	3300034268	Soil	MKKHDKKLIHKALDGETSQSETKRLRARLETDGRMRSEFELLKKVVKDTNRIKIEVPRDFTQKVLRETQRREKPKA
Ga0373950_0053378_196_432	3300034818	Rhizosphere Soil	MAMKKDDKKLIHKALDGEASQSETKRLQEKLASDGRVRSEFEQLKKVVKDTTKIRIDVPADFTKNVMDETKRIRKPKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F087262

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences